Multiple sequence alignment - TraesCS2B01G445800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G445800 chr2B 100.000 5476 0 0 1 5476 638777272 638771797 0.000000e+00 10113.0
1 TraesCS2B01G445800 chr2A 93.358 2665 138 10 2831 5476 679278125 679275481 0.000000e+00 3904.0
2 TraesCS2B01G445800 chr2A 92.486 905 42 17 1219 2106 679279478 679278583 0.000000e+00 1271.0
3 TraesCS2B01G445800 chr2A 87.031 987 48 29 279 1222 679280532 679279583 0.000000e+00 1040.0
4 TraesCS2B01G445800 chr2A 93.426 502 19 6 2274 2766 679278604 679278108 0.000000e+00 732.0
5 TraesCS2B01G445800 chr2A 77.513 1134 213 32 2834 3955 679463562 679462459 1.290000e-180 643.0
6 TraesCS2B01G445800 chr2A 88.889 63 6 1 1410 1471 206839419 206839357 5.880000e-10 76.8
7 TraesCS2B01G445800 chr2D 96.649 1731 52 4 2831 4559 536534599 536532873 0.000000e+00 2870.0
8 TraesCS2B01G445800 chr2D 93.269 936 60 2 4542 5476 536532863 536531930 0.000000e+00 1376.0
9 TraesCS2B01G445800 chr2D 88.287 1144 65 28 280 1371 536537007 536535881 0.000000e+00 1306.0
10 TraesCS2B01G445800 chr2D 93.023 731 31 10 1379 2094 536535797 536535072 0.000000e+00 1050.0
11 TraesCS2B01G445800 chr2D 92.277 505 25 7 2274 2766 536535084 536534582 0.000000e+00 704.0
12 TraesCS2B01G445800 chr2D 94.340 53 2 1 2768 2819 193155921 193155973 4.550000e-11 80.5
13 TraesCS2B01G445800 chr3D 92.727 275 20 0 4 278 160900508 160900234 1.110000e-106 398.0
14 TraesCS2B01G445800 chr3D 90.476 63 3 3 2762 2821 318991711 318991773 4.550000e-11 80.5
15 TraesCS2B01G445800 chr6D 92.000 275 22 0 4 278 5742602 5742328 2.390000e-103 387.0
16 TraesCS2B01G445800 chr6D 94.444 54 2 1 2768 2820 156733791 156733844 1.260000e-11 82.4
17 TraesCS2B01G445800 chr5D 91.636 275 22 1 4 278 486929533 486929260 4.000000e-101 379.0
18 TraesCS2B01G445800 chr5D 100.000 30 0 0 4965 4994 476726855 476726826 7.660000e-04 56.5
19 TraesCS2B01G445800 chr1A 88.889 279 30 1 1 279 261803934 261804211 5.250000e-90 342.0
20 TraesCS2B01G445800 chr3A 88.809 277 31 0 1 277 700718389 700718665 1.890000e-89 340.0
21 TraesCS2B01G445800 chr3A 88.571 70 5 2 1401 1470 477142966 477142900 1.260000e-11 82.4
22 TraesCS2B01G445800 chr7A 88.489 278 32 0 1 278 59339909 59340186 2.440000e-88 337.0
23 TraesCS2B01G445800 chr7A 90.000 60 3 3 2764 2821 486240027 486240085 2.120000e-09 75.0
24 TraesCS2B01G445800 chr6A 87.770 278 34 0 1 278 540834475 540834752 5.290000e-85 326.0
25 TraesCS2B01G445800 chr6A 87.591 274 31 3 2 274 27691727 27691456 1.150000e-81 315.0
26 TraesCS2B01G445800 chr5A 86.545 275 37 0 4 278 472998842 472998568 2.480000e-78 303.0
27 TraesCS2B01G445800 chr5A 74.545 165 33 9 2117 2277 594975509 594975350 4.580000e-06 63.9
28 TraesCS2B01G445800 chr7B 90.476 63 2 3 2757 2818 316404841 316404900 4.550000e-11 80.5
29 TraesCS2B01G445800 chr4B 90.323 62 5 1 2759 2819 11633276 11633337 4.550000e-11 80.5
30 TraesCS2B01G445800 chr1B 92.982 57 1 2 2768 2821 45349081 45349025 4.550000e-11 80.5
31 TraesCS2B01G445800 chr1B 85.185 54 7 1 319 372 178703972 178704024 3.000000e-03 54.7
32 TraesCS2B01G445800 chr5B 88.710 62 5 1 2760 2819 434568718 434568779 2.120000e-09 75.0
33 TraesCS2B01G445800 chr5B 88.710 62 6 1 2758 2819 562276005 562275945 2.120000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G445800 chr2B 638771797 638777272 5475 True 10113.00 10113 100.00000 1 5476 1 chr2B.!!$R1 5475
1 TraesCS2B01G445800 chr2A 679275481 679280532 5051 True 1736.75 3904 91.57525 279 5476 4 chr2A.!!$R3 5197
2 TraesCS2B01G445800 chr2A 679462459 679463562 1103 True 643.00 643 77.51300 2834 3955 1 chr2A.!!$R2 1121
3 TraesCS2B01G445800 chr2D 536531930 536537007 5077 True 1461.20 2870 92.70100 280 5476 5 chr2D.!!$R1 5196

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
57 58 0.039764 GGAAAACCAGGGGAAGGAGG 59.960 60.0 0.00 0.00 0.00 4.30 F
201 202 0.116143 ACTGGAGAAGTGGCCTCTCT 59.884 55.0 17.42 11.94 37.88 3.10 F
2178 2432 0.249398 GGGCAGAACTATGACACGGT 59.751 55.0 0.00 0.00 0.00 4.83 F
2205 2459 0.108207 TGGCCCGGACGTTTCTTTAA 59.892 50.0 0.73 0.00 0.00 1.52 F
2206 2460 0.518636 GGCCCGGACGTTTCTTTAAC 59.481 55.0 0.73 0.00 0.00 2.01 F
4117 4389 0.181114 AGCATCGCATGGCTAAGGAA 59.819 50.0 0.00 0.00 38.90 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1159 1208 0.036105 AGACGACCAAGATGCATGCA 60.036 50.000 25.04 25.04 0.0 3.96 R
2186 2440 0.108207 TTAAAGAAACGTCCGGGCCA 59.892 50.000 4.39 0.00 0.0 5.36 R
4097 4369 1.047801 TCCTTAGCCATGCGATGCTA 58.952 50.000 0.00 0.00 39.0 3.49 R
4100 4372 3.996150 AATTTCCTTAGCCATGCGATG 57.004 42.857 0.00 0.00 0.0 3.84 R
4139 4413 4.524714 CCATCGATGTACTCCCTCTACAAT 59.475 45.833 23.27 0.00 0.0 2.71 R
5373 5702 0.378257 CTTCAGCAAGCGTTGTGTGT 59.622 50.000 0.00 0.00 0.0 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.847602 CCAGAGGAGGCAGCGGAG 61.848 72.222 0.00 0.00 0.00 4.63
18 19 3.847602 CAGAGGAGGCAGCGGAGG 61.848 72.222 0.00 0.00 0.00 4.30
37 38 4.410400 CTCCCAAGGCCCACGGAC 62.410 72.222 0.00 0.00 0.00 4.79
41 42 4.323477 CAAGGCCCACGGACGGAA 62.323 66.667 0.00 0.00 34.63 4.30
42 43 3.562232 AAGGCCCACGGACGGAAA 61.562 61.111 0.00 0.00 34.63 3.13
43 44 3.122727 AAGGCCCACGGACGGAAAA 62.123 57.895 0.00 0.00 34.63 2.29
44 45 3.359523 GGCCCACGGACGGAAAAC 61.360 66.667 0.00 0.00 0.00 2.43
45 46 3.359523 GCCCACGGACGGAAAACC 61.360 66.667 0.00 0.00 0.00 3.27
46 47 2.111460 CCCACGGACGGAAAACCA 59.889 61.111 0.00 0.00 0.00 3.67
47 48 1.964373 CCCACGGACGGAAAACCAG 60.964 63.158 0.00 0.00 0.00 4.00
48 49 1.964373 CCACGGACGGAAAACCAGG 60.964 63.158 0.00 0.00 0.00 4.45
49 50 1.964373 CACGGACGGAAAACCAGGG 60.964 63.158 0.00 0.00 0.00 4.45
50 51 2.359478 CGGACGGAAAACCAGGGG 60.359 66.667 0.00 0.00 0.00 4.79
51 52 2.886134 CGGACGGAAAACCAGGGGA 61.886 63.158 0.00 0.00 0.00 4.81
52 53 1.457165 GGACGGAAAACCAGGGGAA 59.543 57.895 0.00 0.00 0.00 3.97
53 54 0.608308 GGACGGAAAACCAGGGGAAG 60.608 60.000 0.00 0.00 0.00 3.46
54 55 0.608308 GACGGAAAACCAGGGGAAGG 60.608 60.000 0.00 0.00 0.00 3.46
55 56 1.063654 ACGGAAAACCAGGGGAAGGA 61.064 55.000 0.00 0.00 0.00 3.36
56 57 0.322546 CGGAAAACCAGGGGAAGGAG 60.323 60.000 0.00 0.00 0.00 3.69
57 58 0.039764 GGAAAACCAGGGGAAGGAGG 59.960 60.000 0.00 0.00 0.00 4.30
58 59 0.612174 GAAAACCAGGGGAAGGAGGC 60.612 60.000 0.00 0.00 0.00 4.70
59 60 2.426305 AAAACCAGGGGAAGGAGGCG 62.426 60.000 0.00 0.00 0.00 5.52
86 87 4.410400 CCTGCCCGAACACTCCCC 62.410 72.222 0.00 0.00 0.00 4.81
87 88 4.410400 CTGCCCGAACACTCCCCC 62.410 72.222 0.00 0.00 0.00 5.40
107 108 4.052518 CCCCAACCCTCAGGCCTG 62.053 72.222 27.87 27.87 36.11 4.85
108 109 2.935481 CCCAACCCTCAGGCCTGA 60.935 66.667 33.04 33.04 36.11 3.86
109 110 2.311854 CCCAACCCTCAGGCCTGAT 61.312 63.158 35.11 18.86 39.13 2.90
110 111 1.077212 CCAACCCTCAGGCCTGATG 60.077 63.158 35.11 30.35 39.13 3.07
111 112 1.077212 CAACCCTCAGGCCTGATGG 60.077 63.158 40.38 40.38 46.58 3.51
121 122 2.887568 CCTGATGGCGTCGCTGTC 60.888 66.667 18.11 15.15 0.00 3.51
122 123 2.887568 CTGATGGCGTCGCTGTCC 60.888 66.667 18.11 0.17 0.00 4.02
123 124 4.451150 TGATGGCGTCGCTGTCCC 62.451 66.667 18.11 0.00 0.00 4.46
135 136 3.870955 TGTCCCGACAGCTGAAGT 58.129 55.556 23.35 0.00 36.21 3.01
136 137 3.045518 TGTCCCGACAGCTGAAGTA 57.954 52.632 23.35 0.00 36.21 2.24
137 138 0.888619 TGTCCCGACAGCTGAAGTAG 59.111 55.000 23.35 4.94 36.21 2.57
138 139 1.174783 GTCCCGACAGCTGAAGTAGA 58.825 55.000 23.35 7.41 0.00 2.59
139 140 1.544691 GTCCCGACAGCTGAAGTAGAA 59.455 52.381 23.35 0.00 0.00 2.10
140 141 1.819288 TCCCGACAGCTGAAGTAGAAG 59.181 52.381 23.35 0.43 0.00 2.85
141 142 1.134965 CCCGACAGCTGAAGTAGAAGG 60.135 57.143 23.35 10.55 0.00 3.46
142 143 1.819288 CCGACAGCTGAAGTAGAAGGA 59.181 52.381 23.35 0.00 0.00 3.36
143 144 2.231478 CCGACAGCTGAAGTAGAAGGAA 59.769 50.000 23.35 0.00 0.00 3.36
144 145 3.506810 CGACAGCTGAAGTAGAAGGAAG 58.493 50.000 23.35 0.00 0.00 3.46
145 146 3.674682 CGACAGCTGAAGTAGAAGGAAGG 60.675 52.174 23.35 0.00 0.00 3.46
146 147 2.569404 ACAGCTGAAGTAGAAGGAAGGG 59.431 50.000 23.35 0.00 0.00 3.95
147 148 2.569404 CAGCTGAAGTAGAAGGAAGGGT 59.431 50.000 8.42 0.00 0.00 4.34
148 149 2.835156 AGCTGAAGTAGAAGGAAGGGTC 59.165 50.000 0.00 0.00 0.00 4.46
149 150 2.417515 GCTGAAGTAGAAGGAAGGGTCG 60.418 54.545 0.00 0.00 0.00 4.79
150 151 3.090037 CTGAAGTAGAAGGAAGGGTCGA 58.910 50.000 0.00 0.00 0.00 4.20
151 152 3.090037 TGAAGTAGAAGGAAGGGTCGAG 58.910 50.000 0.00 0.00 0.00 4.04
152 153 2.146920 AGTAGAAGGAAGGGTCGAGG 57.853 55.000 0.00 0.00 0.00 4.63
153 154 0.460722 GTAGAAGGAAGGGTCGAGGC 59.539 60.000 0.00 0.00 0.00 4.70
154 155 0.686769 TAGAAGGAAGGGTCGAGGCC 60.687 60.000 0.00 0.00 0.00 5.19
155 156 2.203938 AAGGAAGGGTCGAGGCCA 60.204 61.111 5.01 0.00 0.00 5.36
156 157 2.523453 GAAGGAAGGGTCGAGGCCAC 62.523 65.000 5.01 0.00 0.00 5.01
157 158 4.097361 GGAAGGGTCGAGGCCACC 62.097 72.222 5.01 3.24 0.00 4.61
158 159 3.003763 GAAGGGTCGAGGCCACCT 61.004 66.667 5.01 0.69 36.03 4.00
159 160 3.316573 GAAGGGTCGAGGCCACCTG 62.317 68.421 5.01 0.00 31.76 4.00
169 170 3.798511 GCCACCTGCCCTAGACCC 61.799 72.222 0.00 0.00 0.00 4.46
170 171 3.090532 CCACCTGCCCTAGACCCC 61.091 72.222 0.00 0.00 0.00 4.95
171 172 3.090532 CACCTGCCCTAGACCCCC 61.091 72.222 0.00 0.00 0.00 5.40
172 173 3.622263 ACCTGCCCTAGACCCCCA 61.622 66.667 0.00 0.00 0.00 4.96
173 174 3.090532 CCTGCCCTAGACCCCCAC 61.091 72.222 0.00 0.00 0.00 4.61
174 175 3.090532 CTGCCCTAGACCCCCACC 61.091 72.222 0.00 0.00 0.00 4.61
175 176 4.752594 TGCCCTAGACCCCCACCC 62.753 72.222 0.00 0.00 0.00 4.61
176 177 4.752594 GCCCTAGACCCCCACCCA 62.753 72.222 0.00 0.00 0.00 4.51
177 178 2.366972 CCCTAGACCCCCACCCAG 60.367 72.222 0.00 0.00 0.00 4.45
178 179 3.090532 CCTAGACCCCCACCCAGC 61.091 72.222 0.00 0.00 0.00 4.85
179 180 2.285368 CTAGACCCCCACCCAGCA 60.285 66.667 0.00 0.00 0.00 4.41
180 181 2.609610 TAGACCCCCACCCAGCAC 60.610 66.667 0.00 0.00 0.00 4.40
185 186 4.666253 CCCCACCCAGCACCACTG 62.666 72.222 0.00 0.00 46.77 3.66
199 200 4.987122 ACTGGAGAAGTGGCCTCT 57.013 55.556 3.32 1.65 37.88 3.69
200 201 2.677508 ACTGGAGAAGTGGCCTCTC 58.322 57.895 7.99 9.86 37.88 3.20
201 202 0.116143 ACTGGAGAAGTGGCCTCTCT 59.884 55.000 17.42 11.94 37.88 3.10
202 203 1.359474 ACTGGAGAAGTGGCCTCTCTA 59.641 52.381 17.42 12.10 37.88 2.43
203 204 2.031120 CTGGAGAAGTGGCCTCTCTAG 58.969 57.143 16.27 16.27 33.90 2.43
204 205 0.750249 GGAGAAGTGGCCTCTCTAGC 59.250 60.000 17.42 5.04 0.00 3.42
228 229 2.202932 CGCAGGAGATGGAACCGG 60.203 66.667 0.00 0.00 0.00 5.28
229 230 2.190578 GCAGGAGATGGAACCGGG 59.809 66.667 6.32 0.00 0.00 5.73
230 231 2.911143 CAGGAGATGGAACCGGGG 59.089 66.667 6.32 0.00 0.00 5.73
231 232 3.090532 AGGAGATGGAACCGGGGC 61.091 66.667 6.32 0.00 0.00 5.80
232 233 4.191015 GGAGATGGAACCGGGGCC 62.191 72.222 6.32 7.23 0.00 5.80
233 234 3.407967 GAGATGGAACCGGGGCCA 61.408 66.667 18.34 18.34 38.78 5.36
234 235 3.699134 GAGATGGAACCGGGGCCAC 62.699 68.421 18.39 0.00 36.92 5.01
235 236 3.728373 GATGGAACCGGGGCCACT 61.728 66.667 18.39 9.01 36.92 4.00
236 237 2.285818 ATGGAACCGGGGCCACTA 60.286 61.111 18.39 0.00 36.92 2.74
237 238 2.325393 GATGGAACCGGGGCCACTAG 62.325 65.000 18.39 0.00 36.92 2.57
238 239 2.686106 GGAACCGGGGCCACTAGA 60.686 66.667 6.32 0.00 0.00 2.43
239 240 2.582978 GAACCGGGGCCACTAGAC 59.417 66.667 6.32 0.00 0.00 2.59
240 241 3.007323 AACCGGGGCCACTAGACC 61.007 66.667 6.32 0.00 0.00 3.85
245 246 3.310652 GGGCCACTAGACCCAGAC 58.689 66.667 4.39 0.00 46.22 3.51
246 247 2.722201 GGGCCACTAGACCCAGACG 61.722 68.421 4.39 0.00 46.22 4.18
247 248 2.722201 GGCCACTAGACCCAGACGG 61.722 68.421 0.00 0.00 37.81 4.79
248 249 2.893398 CCACTAGACCCAGACGGC 59.107 66.667 0.00 0.00 33.26 5.68
249 250 2.722201 CCACTAGACCCAGACGGCC 61.722 68.421 0.00 0.00 33.26 6.13
250 251 1.682684 CACTAGACCCAGACGGCCT 60.683 63.158 0.00 0.00 33.26 5.19
251 252 1.380112 ACTAGACCCAGACGGCCTC 60.380 63.158 0.00 0.00 33.26 4.70
252 253 2.043248 TAGACCCAGACGGCCTCC 60.043 66.667 0.00 0.00 33.26 4.30
253 254 3.674050 TAGACCCAGACGGCCTCCC 62.674 68.421 0.00 0.00 33.26 4.30
258 259 4.101448 CAGACGGCCTCCCCCAAG 62.101 72.222 0.00 0.00 0.00 3.61
292 293 2.219674 CGGCGTCTAAATCTTGATCTGC 59.780 50.000 0.00 0.00 0.00 4.26
293 294 3.462021 GGCGTCTAAATCTTGATCTGCT 58.538 45.455 0.00 0.00 0.00 4.24
320 321 7.352739 AGTGTAGTAAAAATTTCAGAACAGCG 58.647 34.615 0.00 0.00 0.00 5.18
367 368 8.883731 ACAAACTCTATCAATAATTTCGTCCAG 58.116 33.333 0.00 0.00 0.00 3.86
430 436 1.203187 ACCTAACAGCCTGGACTCTGA 60.203 52.381 0.00 0.00 34.57 3.27
431 437 2.114616 CCTAACAGCCTGGACTCTGAT 58.885 52.381 0.00 0.00 34.57 2.90
432 438 2.158986 CCTAACAGCCTGGACTCTGATG 60.159 54.545 0.00 0.00 34.57 3.07
433 439 1.649321 AACAGCCTGGACTCTGATGA 58.351 50.000 0.00 0.00 34.57 2.92
434 440 1.649321 ACAGCCTGGACTCTGATGAA 58.351 50.000 0.00 0.00 34.57 2.57
492 498 1.924731 ACGATTGACACCTCCTCTCA 58.075 50.000 0.00 0.00 0.00 3.27
496 502 0.469331 TTGACACCTCCTCTCACGGT 60.469 55.000 0.00 0.00 0.00 4.83
561 567 3.668491 CGTCACGTGGAAGTGTTTGTTTT 60.668 43.478 17.00 0.00 42.40 2.43
593 599 2.481795 GCTTCAGCACCACATGTTTGTT 60.482 45.455 0.00 0.00 41.59 2.83
594 600 2.867287 TCAGCACCACATGTTTGTTG 57.133 45.000 12.50 12.50 32.34 3.33
595 601 1.408340 TCAGCACCACATGTTTGTTGG 59.592 47.619 16.54 8.92 32.34 3.77
669 682 6.039270 GCCATTATGTAGCTTCAACACCATAA 59.961 38.462 0.00 0.00 31.57 1.90
689 702 1.033574 ATAGGAGGCGAGCACAGTAC 58.966 55.000 0.00 0.00 0.00 2.73
705 718 1.618343 AGTACCATTTTGCAAGTGGGC 59.382 47.619 26.90 20.81 37.33 5.36
725 738 1.369839 TTGTCCTTGCACGCGTGAAA 61.370 50.000 41.19 35.44 0.00 2.69
728 741 0.602638 TCCTTGCACGCGTGAAATCT 60.603 50.000 41.19 0.00 0.00 2.40
803 837 4.625742 CAGGATTCGTGTAACTCGTGAAAT 59.374 41.667 0.00 0.00 31.75 2.17
807 841 6.696148 GGATTCGTGTAACTCGTGAAATAGAT 59.304 38.462 0.00 0.00 31.75 1.98
809 843 4.796830 TCGTGTAACTCGTGAAATAGATGC 59.203 41.667 0.00 0.00 31.75 3.91
810 844 4.561213 CGTGTAACTCGTGAAATAGATGCA 59.439 41.667 0.00 0.00 31.75 3.96
811 845 5.232202 CGTGTAACTCGTGAAATAGATGCAT 59.768 40.000 0.00 0.00 31.75 3.96
812 846 6.416750 CGTGTAACTCGTGAAATAGATGCATA 59.583 38.462 0.00 0.00 31.75 3.14
813 847 7.556433 GTGTAACTCGTGAAATAGATGCATAC 58.444 38.462 0.00 0.00 0.00 2.39
814 848 7.435488 GTGTAACTCGTGAAATAGATGCATACT 59.565 37.037 0.00 1.27 0.00 2.12
817 851 5.980116 ACTCGTGAAATAGATGCATACTCAC 59.020 40.000 0.00 7.51 0.00 3.51
818 852 5.242701 CGTGAAATAGATGCATACTCACG 57.757 43.478 22.66 22.66 45.66 4.35
821 855 5.520288 GTGAAATAGATGCATACTCACGTGT 59.480 40.000 16.51 0.00 0.00 4.49
822 856 5.519927 TGAAATAGATGCATACTCACGTGTG 59.480 40.000 16.51 16.06 35.59 3.82
823 857 2.299993 AGATGCATACTCACGTGTGG 57.700 50.000 20.62 14.52 33.38 4.17
864 910 6.220201 TGGATTTTCGATACGATATCTGCAA 58.780 36.000 0.34 0.00 35.23 4.08
865 911 6.145534 TGGATTTTCGATACGATATCTGCAAC 59.854 38.462 0.34 0.00 35.23 4.17
866 912 6.366332 GGATTTTCGATACGATATCTGCAACT 59.634 38.462 0.34 0.00 35.23 3.16
867 913 6.510746 TTTTCGATACGATATCTGCAACTG 57.489 37.500 0.34 0.00 35.23 3.16
868 914 3.565516 TCGATACGATATCTGCAACTGC 58.434 45.455 0.34 0.00 42.50 4.40
869 915 4.499019 TTCGATACGATATCTGCAACTGCA 60.499 41.667 4.01 4.01 41.74 4.41
888 934 1.812571 CAACCCAGAAAGGAATGTCCG 59.187 52.381 0.00 0.00 42.75 4.79
900 946 3.589654 ATGTCCGGCGACCTGTGTG 62.590 63.158 9.30 0.00 38.32 3.82
901 947 4.295119 GTCCGGCGACCTGTGTGT 62.295 66.667 9.30 0.00 32.40 3.72
902 948 4.293648 TCCGGCGACCTGTGTGTG 62.294 66.667 9.30 0.00 0.00 3.82
903 949 4.602259 CCGGCGACCTGTGTGTGT 62.602 66.667 9.30 0.00 0.00 3.72
907 953 1.076332 GGCGACCTGTGTGTGTATTC 58.924 55.000 0.00 0.00 0.00 1.75
945 991 4.912317 ACTCTGACTCACTCAGGTAGTA 57.088 45.455 0.00 0.00 46.01 1.82
947 993 5.822204 ACTCTGACTCACTCAGGTAGTAAT 58.178 41.667 0.00 0.00 46.01 1.89
949 995 7.403671 ACTCTGACTCACTCAGGTAGTAATTA 58.596 38.462 0.00 0.00 46.01 1.40
961 1007 6.040878 CAGGTAGTAATTAACTCCCAGTTCG 58.959 44.000 0.00 0.00 36.66 3.95
965 1011 8.034804 GGTAGTAATTAACTCCCAGTTCGTTAA 58.965 37.037 0.00 0.00 39.51 2.01
1016 1062 2.746277 AATGACGGCGACAAGGGC 60.746 61.111 16.62 0.00 0.00 5.19
1035 1081 0.872388 CCGTAATTAATCTGCCCGGC 59.128 55.000 1.04 1.04 0.00 6.13
1157 1206 3.813724 AGGTAGCCTGCCATGCCC 61.814 66.667 0.45 0.00 29.57 5.36
1158 1207 4.127744 GGTAGCCTGCCATGCCCA 62.128 66.667 0.00 0.00 0.00 5.36
1159 1208 2.196776 GTAGCCTGCCATGCCCAT 59.803 61.111 0.00 0.00 0.00 4.00
1160 1209 2.196502 TAGCCTGCCATGCCCATG 59.803 61.111 1.28 1.28 38.51 3.66
1201 1258 8.120465 GTCTCGTTTCTTTGATCTGTTTGTTTA 58.880 33.333 0.00 0.00 0.00 2.01
1230 1393 3.932089 ACGCAAACAGCTTCAATTTTTGT 59.068 34.783 0.00 0.00 42.61 2.83
1239 1402 5.397534 CAGCTTCAATTTTTGTGTTCGAGAG 59.602 40.000 0.00 0.00 0.00 3.20
1264 1427 6.670990 AATAGATTAATCAGTCGTAACGCG 57.329 37.500 17.56 3.53 43.01 6.01
1270 1433 2.430244 AGTCGTAACGCGGTGCTG 60.430 61.111 7.07 1.69 41.72 4.41
1342 1505 1.806542 TCGGAGAAAATGCTGCAAGTC 59.193 47.619 6.36 4.41 35.30 3.01
1372 1535 4.734917 CCAGCTGGTAGTATATACGAAGC 58.265 47.826 25.53 17.27 0.00 3.86
1373 1536 4.404324 CAGCTGGTAGTATATACGAAGCG 58.596 47.826 5.57 12.93 0.00 4.68
1374 1537 4.153655 CAGCTGGTAGTATATACGAAGCGA 59.846 45.833 5.57 8.28 0.00 4.93
1375 1538 4.392445 AGCTGGTAGTATATACGAAGCGAG 59.608 45.833 18.16 14.47 0.00 5.03
1408 1647 8.867112 TGATTACTACTCCTACTAAATTTGCG 57.133 34.615 0.00 0.00 0.00 4.85
1507 1746 1.193426 GTGACGAGCTCTTGTTCTTGC 59.807 52.381 12.85 0.00 0.00 4.01
1527 1766 6.765989 TCTTGCATGTGTACTTTTCAGTTAGT 59.234 34.615 0.00 0.00 34.06 2.24
1668 1907 3.651980 CTTTGCCTGCCTCCCCTCC 62.652 68.421 0.00 0.00 0.00 4.30
1693 1932 1.200020 CAATGCTTCCCAACGTCTTCC 59.800 52.381 0.00 0.00 0.00 3.46
1833 2072 6.148264 ACTACTCGCTACAAGTTGAGTAAAC 58.852 40.000 10.54 0.00 41.80 2.01
1879 2120 5.918576 TGTTTACTGATTGTAGTCTCGTGTG 59.081 40.000 0.00 0.00 32.08 3.82
1932 2173 1.140816 GTCGTTGGTTGCAGAGAGAC 58.859 55.000 0.00 0.00 0.00 3.36
1950 2191 1.000385 GACGAGGAGATCATGCTGGAG 60.000 57.143 0.00 0.00 0.00 3.86
1965 2206 1.184970 TGGAGACGGAGACATGTGCA 61.185 55.000 1.15 0.00 0.00 4.57
2019 2264 3.560481 ACGACGTCTCATCTGGTATACTG 59.440 47.826 14.70 0.00 0.00 2.74
2033 2282 7.618137 TCTGGTATACTGTTTCCTTTTAGTCC 58.382 38.462 2.25 0.00 0.00 3.85
2045 2294 6.003859 TCCTTTTAGTCCCGCCAAAATATA 57.996 37.500 0.00 0.00 0.00 0.86
2050 2304 7.648039 TTTAGTCCCGCCAAAATATATTGTT 57.352 32.000 0.00 0.00 0.00 2.83
2148 2402 9.570488 AAGTTAGTGATAGTTTAGCTAAGTTCG 57.430 33.333 6.24 0.00 32.87 3.95
2149 2403 8.738106 AGTTAGTGATAGTTTAGCTAAGTTCGT 58.262 33.333 6.24 0.00 32.72 3.85
2150 2404 9.351570 GTTAGTGATAGTTTAGCTAAGTTCGTT 57.648 33.333 6.24 0.00 32.72 3.85
2153 2407 8.954350 AGTGATAGTTTAGCTAAGTTCGTTAGA 58.046 33.333 6.24 0.00 40.79 2.10
2154 2408 9.224058 GTGATAGTTTAGCTAAGTTCGTTAGAG 57.776 37.037 6.24 0.00 40.79 2.43
2155 2409 8.954350 TGATAGTTTAGCTAAGTTCGTTAGAGT 58.046 33.333 6.24 0.00 40.79 3.24
2156 2410 9.786105 GATAGTTTAGCTAAGTTCGTTAGAGTT 57.214 33.333 6.24 0.00 40.79 3.01
2157 2411 7.870588 AGTTTAGCTAAGTTCGTTAGAGTTG 57.129 36.000 6.24 0.00 40.79 3.16
2158 2412 7.655490 AGTTTAGCTAAGTTCGTTAGAGTTGA 58.345 34.615 6.24 0.00 40.79 3.18
2159 2413 7.808856 AGTTTAGCTAAGTTCGTTAGAGTTGAG 59.191 37.037 6.24 0.00 40.79 3.02
2160 2414 5.061920 AGCTAAGTTCGTTAGAGTTGAGG 57.938 43.478 0.00 0.00 40.79 3.86
2161 2415 4.082136 AGCTAAGTTCGTTAGAGTTGAGGG 60.082 45.833 0.00 0.00 40.79 4.30
2162 2416 2.745515 AGTTCGTTAGAGTTGAGGGC 57.254 50.000 0.00 0.00 0.00 5.19
2163 2417 1.968493 AGTTCGTTAGAGTTGAGGGCA 59.032 47.619 0.00 0.00 0.00 5.36
2164 2418 2.028930 AGTTCGTTAGAGTTGAGGGCAG 60.029 50.000 0.00 0.00 0.00 4.85
2165 2419 1.919240 TCGTTAGAGTTGAGGGCAGA 58.081 50.000 0.00 0.00 0.00 4.26
2166 2420 2.244695 TCGTTAGAGTTGAGGGCAGAA 58.755 47.619 0.00 0.00 0.00 3.02
2167 2421 2.029290 TCGTTAGAGTTGAGGGCAGAAC 60.029 50.000 0.00 0.00 0.00 3.01
2168 2422 2.028930 CGTTAGAGTTGAGGGCAGAACT 60.029 50.000 0.00 0.00 35.07 3.01
2169 2423 3.192844 CGTTAGAGTTGAGGGCAGAACTA 59.807 47.826 0.00 0.00 32.47 2.24
2170 2424 4.142138 CGTTAGAGTTGAGGGCAGAACTAT 60.142 45.833 0.00 0.00 32.47 2.12
2171 2425 3.902881 AGAGTTGAGGGCAGAACTATG 57.097 47.619 0.00 0.00 32.47 2.23
2172 2426 3.445008 AGAGTTGAGGGCAGAACTATGA 58.555 45.455 0.00 0.00 32.47 2.15
2173 2427 3.196685 AGAGTTGAGGGCAGAACTATGAC 59.803 47.826 0.00 0.00 32.47 3.06
2174 2428 2.906389 AGTTGAGGGCAGAACTATGACA 59.094 45.455 0.00 0.00 30.47 3.58
2175 2429 3.003480 GTTGAGGGCAGAACTATGACAC 58.997 50.000 0.00 0.00 0.00 3.67
2176 2430 1.204704 TGAGGGCAGAACTATGACACG 59.795 52.381 0.00 0.00 0.00 4.49
2177 2431 0.537188 AGGGCAGAACTATGACACGG 59.463 55.000 0.00 0.00 0.00 4.94
2178 2432 0.249398 GGGCAGAACTATGACACGGT 59.751 55.000 0.00 0.00 0.00 4.83
2179 2433 1.338769 GGGCAGAACTATGACACGGTT 60.339 52.381 0.00 0.00 0.00 4.44
2180 2434 2.093869 GGGCAGAACTATGACACGGTTA 60.094 50.000 0.00 0.00 0.00 2.85
2181 2435 3.187700 GGCAGAACTATGACACGGTTAG 58.812 50.000 0.00 0.00 0.00 2.34
2182 2436 3.187700 GCAGAACTATGACACGGTTAGG 58.812 50.000 0.00 0.00 0.00 2.69
2183 2437 3.782046 CAGAACTATGACACGGTTAGGG 58.218 50.000 0.00 0.00 0.00 3.53
2184 2438 3.194968 CAGAACTATGACACGGTTAGGGT 59.805 47.826 0.00 0.00 40.76 4.34
2189 2443 3.066198 ACACGGTTAGGGTCTGGC 58.934 61.111 0.00 0.00 0.00 4.85
2190 2444 2.267961 CACGGTTAGGGTCTGGCC 59.732 66.667 0.00 0.00 0.00 5.36
2199 2453 4.324991 GGTCTGGCCCGGACGTTT 62.325 66.667 16.41 0.00 40.37 3.60
2200 2454 2.741211 GTCTGGCCCGGACGTTTC 60.741 66.667 7.02 0.00 29.77 2.78
2201 2455 2.920912 TCTGGCCCGGACGTTTCT 60.921 61.111 0.73 0.00 0.00 2.52
2202 2456 2.032071 CTGGCCCGGACGTTTCTT 59.968 61.111 0.73 0.00 0.00 2.52
2203 2457 1.599797 CTGGCCCGGACGTTTCTTT 60.600 57.895 0.73 0.00 0.00 2.52
2204 2458 0.320946 CTGGCCCGGACGTTTCTTTA 60.321 55.000 0.73 0.00 0.00 1.85
2205 2459 0.108207 TGGCCCGGACGTTTCTTTAA 59.892 50.000 0.73 0.00 0.00 1.52
2206 2460 0.518636 GGCCCGGACGTTTCTTTAAC 59.481 55.000 0.73 0.00 0.00 2.01
2207 2461 1.516161 GCCCGGACGTTTCTTTAACT 58.484 50.000 0.73 0.00 34.46 2.24
2208 2462 1.462283 GCCCGGACGTTTCTTTAACTC 59.538 52.381 0.73 0.00 34.46 3.01
2209 2463 2.869237 GCCCGGACGTTTCTTTAACTCT 60.869 50.000 0.73 0.00 34.46 3.24
2210 2464 3.614870 GCCCGGACGTTTCTTTAACTCTA 60.615 47.826 0.73 0.00 34.46 2.43
2211 2465 4.171754 CCCGGACGTTTCTTTAACTCTAG 58.828 47.826 0.73 0.00 34.46 2.43
2212 2466 3.611549 CCGGACGTTTCTTTAACTCTAGC 59.388 47.826 0.00 0.00 34.46 3.42
2213 2467 4.483311 CGGACGTTTCTTTAACTCTAGCT 58.517 43.478 0.00 0.00 34.46 3.32
2214 2468 4.558080 CGGACGTTTCTTTAACTCTAGCTC 59.442 45.833 0.00 0.00 34.46 4.09
2215 2469 5.467705 GGACGTTTCTTTAACTCTAGCTCA 58.532 41.667 0.00 0.00 34.46 4.26
2216 2470 5.924825 GGACGTTTCTTTAACTCTAGCTCAA 59.075 40.000 0.00 0.00 34.46 3.02
2217 2471 6.089685 GGACGTTTCTTTAACTCTAGCTCAAG 59.910 42.308 0.00 0.00 34.46 3.02
2218 2472 6.746120 ACGTTTCTTTAACTCTAGCTCAAGA 58.254 36.000 0.00 0.00 34.46 3.02
2219 2473 7.379750 ACGTTTCTTTAACTCTAGCTCAAGAT 58.620 34.615 0.00 0.00 34.46 2.40
2220 2474 7.329717 ACGTTTCTTTAACTCTAGCTCAAGATG 59.670 37.037 0.00 0.00 34.46 2.90
2221 2475 7.542477 CGTTTCTTTAACTCTAGCTCAAGATGA 59.458 37.037 0.00 0.00 34.46 2.92
2222 2476 9.377312 GTTTCTTTAACTCTAGCTCAAGATGAT 57.623 33.333 0.00 0.00 33.79 2.45
2223 2477 9.950496 TTTCTTTAACTCTAGCTCAAGATGATT 57.050 29.630 0.00 0.00 0.00 2.57
2224 2478 8.939201 TCTTTAACTCTAGCTCAAGATGATTG 57.061 34.615 0.00 0.00 0.00 2.67
2225 2479 8.535335 TCTTTAACTCTAGCTCAAGATGATTGT 58.465 33.333 0.00 0.00 0.00 2.71
2226 2480 9.809096 CTTTAACTCTAGCTCAAGATGATTGTA 57.191 33.333 0.00 0.00 0.00 2.41
2228 2482 9.809096 TTAACTCTAGCTCAAGATGATTGTAAG 57.191 33.333 0.00 0.00 0.00 2.34
2229 2483 6.815089 ACTCTAGCTCAAGATGATTGTAAGG 58.185 40.000 0.00 0.00 0.00 2.69
2230 2484 6.609212 ACTCTAGCTCAAGATGATTGTAAGGA 59.391 38.462 0.00 0.00 0.00 3.36
2231 2485 6.810911 TCTAGCTCAAGATGATTGTAAGGAC 58.189 40.000 0.00 0.00 0.00 3.85
2232 2486 4.775236 AGCTCAAGATGATTGTAAGGACC 58.225 43.478 0.00 0.00 0.00 4.46
2233 2487 4.472833 AGCTCAAGATGATTGTAAGGACCT 59.527 41.667 0.00 0.00 0.00 3.85
2234 2488 5.045286 AGCTCAAGATGATTGTAAGGACCTT 60.045 40.000 12.41 12.41 0.00 3.50
2235 2489 5.065731 GCTCAAGATGATTGTAAGGACCTTG 59.934 44.000 17.47 0.00 33.20 3.61
2236 2490 6.126863 TCAAGATGATTGTAAGGACCTTGT 57.873 37.500 17.47 0.09 33.54 3.16
2237 2491 7.252612 TCAAGATGATTGTAAGGACCTTGTA 57.747 36.000 17.47 2.57 33.54 2.41
2238 2492 7.685481 TCAAGATGATTGTAAGGACCTTGTAA 58.315 34.615 17.47 11.59 33.54 2.41
2239 2493 8.328758 TCAAGATGATTGTAAGGACCTTGTAAT 58.671 33.333 17.47 15.55 33.54 1.89
2240 2494 8.960591 CAAGATGATTGTAAGGACCTTGTAATT 58.039 33.333 17.47 3.61 0.00 1.40
2241 2495 8.511604 AGATGATTGTAAGGACCTTGTAATTG 57.488 34.615 17.47 0.00 0.00 2.32
2242 2496 8.328758 AGATGATTGTAAGGACCTTGTAATTGA 58.671 33.333 17.47 8.19 0.00 2.57
2243 2497 7.681939 TGATTGTAAGGACCTTGTAATTGAC 57.318 36.000 17.47 5.59 0.00 3.18
2244 2498 7.458397 TGATTGTAAGGACCTTGTAATTGACT 58.542 34.615 17.47 0.00 0.00 3.41
2245 2499 8.598916 TGATTGTAAGGACCTTGTAATTGACTA 58.401 33.333 17.47 2.56 0.00 2.59
2246 2500 9.444600 GATTGTAAGGACCTTGTAATTGACTAA 57.555 33.333 17.47 3.43 0.00 2.24
2247 2501 9.975218 ATTGTAAGGACCTTGTAATTGACTAAT 57.025 29.630 17.47 5.32 0.00 1.73
2249 2503 9.880157 TGTAAGGACCTTGTAATTGACTAATAC 57.120 33.333 17.47 2.25 0.00 1.89
2250 2504 9.880157 GTAAGGACCTTGTAATTGACTAATACA 57.120 33.333 17.47 0.00 0.00 2.29
2252 2506 9.975218 AAGGACCTTGTAATTGACTAATACAAT 57.025 29.630 5.76 0.00 39.25 2.71
2253 2507 9.396022 AGGACCTTGTAATTGACTAATACAATG 57.604 33.333 0.00 0.13 37.89 2.82
2254 2508 9.174166 GGACCTTGTAATTGACTAATACAATGT 57.826 33.333 5.81 5.81 37.89 2.71
2262 2516 7.865706 ATTGACTAATACAATGTTCTCACCC 57.134 36.000 0.00 0.00 36.74 4.61
2263 2517 5.416083 TGACTAATACAATGTTCTCACCCG 58.584 41.667 0.00 0.00 0.00 5.28
2264 2518 4.189231 ACTAATACAATGTTCTCACCCGC 58.811 43.478 0.00 0.00 0.00 6.13
2265 2519 2.779755 ATACAATGTTCTCACCCGCA 57.220 45.000 0.00 0.00 0.00 5.69
2266 2520 2.552599 TACAATGTTCTCACCCGCAA 57.447 45.000 0.00 0.00 0.00 4.85
2267 2521 1.686355 ACAATGTTCTCACCCGCAAA 58.314 45.000 0.00 0.00 0.00 3.68
2268 2522 2.028130 ACAATGTTCTCACCCGCAAAA 58.972 42.857 0.00 0.00 0.00 2.44
2269 2523 2.428890 ACAATGTTCTCACCCGCAAAAA 59.571 40.909 0.00 0.00 0.00 1.94
2330 2585 5.747197 CGTGTATATTTCCTCACACACTACC 59.253 44.000 5.33 0.00 41.02 3.18
2568 2823 5.941555 CCACTCCTAAGAGAGGTAAATGT 57.058 43.478 0.00 0.00 46.76 2.71
2574 2829 6.708285 TCCTAAGAGAGGTAAATGTTCAACC 58.292 40.000 0.00 0.00 46.76 3.77
2576 2831 4.884668 AGAGAGGTAAATGTTCAACCGA 57.115 40.909 0.00 0.00 38.37 4.69
2584 2839 8.117813 AGGTAAATGTTCAACCGAAAACATAT 57.882 30.769 1.54 0.00 43.45 1.78
2594 2849 5.632244 ACCGAAAACATATTTGTACCCAC 57.368 39.130 0.00 0.00 34.06 4.61
2595 2850 5.318630 ACCGAAAACATATTTGTACCCACT 58.681 37.500 0.00 0.00 34.06 4.00
2627 2882 6.997655 TCATAGATAGCCTTAGGATGTGTTG 58.002 40.000 0.69 0.00 0.00 3.33
2638 2901 3.955471 AGGATGTGTTGGGTTGTGATAG 58.045 45.455 0.00 0.00 0.00 2.08
2703 2967 9.515020 GCTTATTTGTCGATGAAATTAATTCCA 57.485 29.630 0.10 0.00 37.22 3.53
2716 2982 8.141268 TGAAATTAATTCCAGACTTTGTTGGAC 58.859 33.333 0.10 0.00 42.93 4.02
2759 3025 9.948964 TGCTCAGTGATATATATATGCTTTTGT 57.051 29.630 10.03 0.00 0.00 2.83
2792 3058 6.680874 TTTTTAGCTTTGACCGTAGAACAA 57.319 33.333 0.00 0.00 0.00 2.83
2793 3059 6.870971 TTTTAGCTTTGACCGTAGAACAAT 57.129 33.333 0.00 0.00 0.00 2.71
2794 3060 6.870971 TTTAGCTTTGACCGTAGAACAATT 57.129 33.333 0.00 0.00 0.00 2.32
2795 3061 4.749245 AGCTTTGACCGTAGAACAATTG 57.251 40.909 3.24 3.24 0.00 2.32
2796 3062 4.134563 AGCTTTGACCGTAGAACAATTGT 58.865 39.130 4.92 4.92 0.00 2.71
2797 3063 4.578928 AGCTTTGACCGTAGAACAATTGTT 59.421 37.500 23.49 23.49 41.64 2.83
2870 3136 7.928167 TGTTATAGGTAGAACATGCTCTTGATG 59.072 37.037 3.52 0.00 33.03 3.07
2887 3153 2.116238 GATGGCCCCTTCTACACTACA 58.884 52.381 0.00 0.00 0.00 2.74
3006 3272 7.786114 CAAAACAAGGTTTGTGTAATGCATAG 58.214 34.615 0.00 0.00 44.59 2.23
3528 3796 2.074099 TGCAGGTGGGATAAGCACA 58.926 52.632 0.00 0.00 0.00 4.57
3784 4056 1.264749 TGACCGAGGTGGAATGGAGG 61.265 60.000 0.00 0.00 42.00 4.30
3904 4176 4.040095 GGGCCAAAGATTACGGAGTATACT 59.960 45.833 4.68 4.68 45.21 2.12
3979 4251 2.076863 CTCCTGAACGATGTCCAAACC 58.923 52.381 0.00 0.00 0.00 3.27
4002 4274 1.659098 CGAGGTATCACGCCAAAGTTC 59.341 52.381 0.00 0.00 0.00 3.01
4003 4275 2.007608 GAGGTATCACGCCAAAGTTCC 58.992 52.381 0.00 0.00 0.00 3.62
4004 4276 1.628846 AGGTATCACGCCAAAGTTCCT 59.371 47.619 0.00 0.00 0.00 3.36
4016 4288 6.155827 CGCCAAAGTTCCTGATTTTAATTCA 58.844 36.000 0.00 0.00 0.00 2.57
4097 4369 4.993705 TCACACTCCAAGGGAAAATAGT 57.006 40.909 0.00 0.00 0.00 2.12
4100 4372 4.636206 CACACTCCAAGGGAAAATAGTAGC 59.364 45.833 0.00 0.00 0.00 3.58
4102 4374 5.044846 ACACTCCAAGGGAAAATAGTAGCAT 60.045 40.000 0.00 0.00 0.00 3.79
4103 4375 5.529060 CACTCCAAGGGAAAATAGTAGCATC 59.471 44.000 0.00 0.00 0.00 3.91
4104 4376 4.703897 TCCAAGGGAAAATAGTAGCATCG 58.296 43.478 0.00 0.00 0.00 3.84
4105 4377 3.251004 CCAAGGGAAAATAGTAGCATCGC 59.749 47.826 0.00 0.00 0.00 4.58
4108 4380 4.067896 AGGGAAAATAGTAGCATCGCATG 58.932 43.478 0.00 0.00 0.00 4.06
4117 4389 0.181114 AGCATCGCATGGCTAAGGAA 59.819 50.000 0.00 0.00 38.90 3.36
4118 4390 1.024271 GCATCGCATGGCTAAGGAAA 58.976 50.000 0.00 0.00 0.00 3.13
4121 4395 3.253188 GCATCGCATGGCTAAGGAAATTA 59.747 43.478 0.00 0.00 0.00 1.40
4219 4493 0.753262 GGTGGCTCGATGACCATACT 59.247 55.000 5.38 0.00 38.46 2.12
4230 4504 1.343069 GACCATACTAGAGGCCAGGG 58.657 60.000 5.01 0.00 0.00 4.45
4236 4510 0.689412 ACTAGAGGCCAGGGAAGAGC 60.689 60.000 5.01 0.00 0.00 4.09
4453 4727 2.053244 CCAGCTCCCCATGAATCTACT 58.947 52.381 0.00 0.00 0.00 2.57
4475 4749 2.168496 CCTGGTCTCGACTTGTCCTAA 58.832 52.381 0.00 0.00 0.00 2.69
4626 4928 8.106247 TCCCTATTTAGTGTGTCAAACATTTC 57.894 34.615 0.00 0.00 41.97 2.17
4702 5004 8.726870 TTTTTAGCCCAGATGTAATACAGTAC 57.273 34.615 0.00 0.00 0.00 2.73
4752 5054 9.821662 GTTTACAACAATAAGTATCTCAACCAC 57.178 33.333 0.00 0.00 0.00 4.16
4757 5059 8.607459 CAACAATAAGTATCTCAACCACAGATC 58.393 37.037 0.00 0.00 32.61 2.75
4859 5161 5.447778 AATGTCAATCCATCTGAGAAGGT 57.552 39.130 3.40 0.00 0.00 3.50
4915 5218 6.303259 GCAAACGTATTAAGTCTTGCTTCAAG 59.697 38.462 9.46 0.37 42.25 3.02
4916 5219 7.352739 CAAACGTATTAAGTCTTGCTTCAAGT 58.647 34.615 6.47 0.00 41.66 3.16
4917 5220 6.467723 ACGTATTAAGTCTTGCTTCAAGTG 57.532 37.500 6.47 0.00 41.66 3.16
4918 5221 5.408604 ACGTATTAAGTCTTGCTTCAAGTGG 59.591 40.000 6.47 0.00 41.66 4.00
4919 5222 5.408604 CGTATTAAGTCTTGCTTCAAGTGGT 59.591 40.000 6.47 0.00 41.66 4.16
4920 5223 6.588756 CGTATTAAGTCTTGCTTCAAGTGGTA 59.411 38.462 6.47 0.00 41.66 3.25
4921 5224 7.277981 CGTATTAAGTCTTGCTTCAAGTGGTAT 59.722 37.037 6.47 0.23 41.66 2.73
4922 5225 8.947115 GTATTAAGTCTTGCTTCAAGTGGTATT 58.053 33.333 6.47 0.42 41.66 1.89
4923 5226 7.817418 TTAAGTCTTGCTTCAAGTGGTATTT 57.183 32.000 6.47 0.00 41.66 1.40
4924 5227 5.948992 AGTCTTGCTTCAAGTGGTATTTC 57.051 39.130 6.47 0.00 41.66 2.17
4930 5243 4.278170 TGCTTCAAGTGGTATTTCAAGTGG 59.722 41.667 0.00 0.00 0.00 4.00
4940 5253 1.454201 TTTCAAGTGGTGCGTGTTGA 58.546 45.000 0.00 0.00 0.00 3.18
4946 5259 0.100503 GTGGTGCGTGTTGAAGCTTT 59.899 50.000 0.00 0.00 0.00 3.51
5115 5428 3.378112 TGGAATTCCATAAGCTTTGAGCG 59.622 43.478 23.63 0.00 43.51 5.03
5125 5438 2.527442 GCTTTGAGCGGTATCACAAC 57.473 50.000 0.00 0.00 0.00 3.32
5138 5451 5.753921 CGGTATCACAACCCTAGAAAAGATC 59.246 44.000 0.00 0.00 36.03 2.75
5200 5513 3.378911 TGTAACAGTCAAGATGCGTGA 57.621 42.857 0.00 0.00 0.00 4.35
5299 5628 3.628942 TCTGCCAGCACATAACAATGATC 59.371 43.478 0.00 0.00 0.00 2.92
5330 5659 5.741011 TGTATGGTCCCATCAAACTCTTAC 58.259 41.667 1.17 0.00 37.82 2.34
5368 5697 7.538575 AGAAAACCTGATTATTATGTGTGTGC 58.461 34.615 0.00 0.00 0.00 4.57
5373 5702 1.079503 TTATTATGTGTGTGCGCGCA 58.920 45.000 33.09 33.09 0.00 6.09
5434 5763 7.502226 TGGAACTTGAATATTGACAAAGTCACT 59.498 33.333 0.00 0.00 42.60 3.41
5455 5784 2.375173 TAGACGCCTCGCTATCGATA 57.625 50.000 4.78 4.78 44.56 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.847602 CTCCGCTGCCTCCTCTGG 61.848 72.222 0.00 0.00 0.00 3.86
1 2 3.847602 CCTCCGCTGCCTCCTCTG 61.848 72.222 0.00 0.00 0.00 3.35
20 21 4.410400 GTCCGTGGGCCTTGGGAG 62.410 72.222 4.53 0.00 0.00 4.30
24 25 3.835790 TTTCCGTCCGTGGGCCTTG 62.836 63.158 4.53 0.00 0.00 3.61
25 26 3.122727 TTTTCCGTCCGTGGGCCTT 62.123 57.895 4.53 0.00 0.00 4.35
26 27 3.562232 TTTTCCGTCCGTGGGCCT 61.562 61.111 4.53 0.00 0.00 5.19
27 28 3.359523 GTTTTCCGTCCGTGGGCC 61.360 66.667 0.00 0.00 0.00 5.80
28 29 3.359523 GGTTTTCCGTCCGTGGGC 61.360 66.667 0.00 0.00 0.00 5.36
29 30 1.964373 CTGGTTTTCCGTCCGTGGG 60.964 63.158 0.00 0.00 44.36 4.61
30 31 1.964373 CCTGGTTTTCCGTCCGTGG 60.964 63.158 0.00 0.00 44.36 4.94
31 32 1.964373 CCCTGGTTTTCCGTCCGTG 60.964 63.158 0.00 0.00 44.36 4.94
32 33 2.428622 CCCTGGTTTTCCGTCCGT 59.571 61.111 0.00 0.00 44.36 4.69
33 34 2.359478 CCCCTGGTTTTCCGTCCG 60.359 66.667 0.00 0.00 44.36 4.79
34 35 0.608308 CTTCCCCTGGTTTTCCGTCC 60.608 60.000 0.00 0.00 44.36 4.79
35 36 0.608308 CCTTCCCCTGGTTTTCCGTC 60.608 60.000 0.00 0.00 44.36 4.79
36 37 1.063654 TCCTTCCCCTGGTTTTCCGT 61.064 55.000 0.00 0.00 44.36 4.69
37 38 0.322546 CTCCTTCCCCTGGTTTTCCG 60.323 60.000 0.00 0.00 44.36 4.30
38 39 0.039764 CCTCCTTCCCCTGGTTTTCC 59.960 60.000 0.00 0.00 41.14 3.13
39 40 0.612174 GCCTCCTTCCCCTGGTTTTC 60.612 60.000 0.00 0.00 0.00 2.29
40 41 1.465172 GCCTCCTTCCCCTGGTTTT 59.535 57.895 0.00 0.00 0.00 2.43
41 42 2.907179 CGCCTCCTTCCCCTGGTTT 61.907 63.158 0.00 0.00 0.00 3.27
42 43 3.330720 CGCCTCCTTCCCCTGGTT 61.331 66.667 0.00 0.00 0.00 3.67
69 70 4.410400 GGGGAGTGTTCGGGCAGG 62.410 72.222 0.00 0.00 0.00 4.85
70 71 4.410400 GGGGGAGTGTTCGGGCAG 62.410 72.222 0.00 0.00 0.00 4.85
90 91 4.052518 CAGGCCTGAGGGTTGGGG 62.053 72.222 29.88 0.00 34.45 4.96
91 92 2.311854 ATCAGGCCTGAGGGTTGGG 61.312 63.158 37.03 8.14 43.61 4.12
92 93 1.077212 CATCAGGCCTGAGGGTTGG 60.077 63.158 37.03 19.20 43.61 3.77
93 94 4.651867 CATCAGGCCTGAGGGTTG 57.348 61.111 37.03 27.00 43.61 3.77
104 105 2.887568 GACAGCGACGCCATCAGG 60.888 66.667 17.79 1.99 38.23 3.86
105 106 2.887568 GGACAGCGACGCCATCAG 60.888 66.667 17.79 4.27 0.00 2.90
106 107 4.451150 GGGACAGCGACGCCATCA 62.451 66.667 17.79 0.00 0.00 3.07
118 119 0.888619 CTACTTCAGCTGTCGGGACA 59.111 55.000 14.67 1.05 39.32 4.02
119 120 1.174783 TCTACTTCAGCTGTCGGGAC 58.825 55.000 14.67 0.00 0.00 4.46
120 121 1.819288 CTTCTACTTCAGCTGTCGGGA 59.181 52.381 14.67 4.50 0.00 5.14
121 122 1.134965 CCTTCTACTTCAGCTGTCGGG 60.135 57.143 14.67 5.14 0.00 5.14
122 123 1.819288 TCCTTCTACTTCAGCTGTCGG 59.181 52.381 14.67 7.63 0.00 4.79
123 124 3.506810 CTTCCTTCTACTTCAGCTGTCG 58.493 50.000 14.67 8.49 0.00 4.35
124 125 3.368948 CCCTTCCTTCTACTTCAGCTGTC 60.369 52.174 14.67 0.00 0.00 3.51
125 126 2.569404 CCCTTCCTTCTACTTCAGCTGT 59.431 50.000 14.67 0.00 0.00 4.40
126 127 2.569404 ACCCTTCCTTCTACTTCAGCTG 59.431 50.000 7.63 7.63 0.00 4.24
127 128 2.835156 GACCCTTCCTTCTACTTCAGCT 59.165 50.000 0.00 0.00 0.00 4.24
128 129 2.417515 CGACCCTTCCTTCTACTTCAGC 60.418 54.545 0.00 0.00 0.00 4.26
129 130 3.090037 TCGACCCTTCCTTCTACTTCAG 58.910 50.000 0.00 0.00 0.00 3.02
130 131 3.090037 CTCGACCCTTCCTTCTACTTCA 58.910 50.000 0.00 0.00 0.00 3.02
131 132 2.427812 CCTCGACCCTTCCTTCTACTTC 59.572 54.545 0.00 0.00 0.00 3.01
132 133 2.458620 CCTCGACCCTTCCTTCTACTT 58.541 52.381 0.00 0.00 0.00 2.24
133 134 1.960953 GCCTCGACCCTTCCTTCTACT 60.961 57.143 0.00 0.00 0.00 2.57
134 135 0.460722 GCCTCGACCCTTCCTTCTAC 59.539 60.000 0.00 0.00 0.00 2.59
135 136 0.686769 GGCCTCGACCCTTCCTTCTA 60.687 60.000 0.00 0.00 0.00 2.10
136 137 1.990614 GGCCTCGACCCTTCCTTCT 60.991 63.158 0.00 0.00 0.00 2.85
137 138 2.291043 TGGCCTCGACCCTTCCTTC 61.291 63.158 3.32 0.00 0.00 3.46
138 139 2.203938 TGGCCTCGACCCTTCCTT 60.204 61.111 3.32 0.00 0.00 3.36
139 140 3.003763 GTGGCCTCGACCCTTCCT 61.004 66.667 3.32 0.00 0.00 3.36
140 141 4.097361 GGTGGCCTCGACCCTTCC 62.097 72.222 3.32 0.00 0.00 3.46
141 142 3.003763 AGGTGGCCTCGACCCTTC 61.004 66.667 3.32 0.00 33.51 3.46
142 143 3.322466 CAGGTGGCCTCGACCCTT 61.322 66.667 3.32 0.00 33.51 3.95
152 153 3.798511 GGGTCTAGGGCAGGTGGC 61.799 72.222 0.00 0.00 43.74 5.01
153 154 3.090532 GGGGTCTAGGGCAGGTGG 61.091 72.222 0.00 0.00 0.00 4.61
154 155 3.090532 GGGGGTCTAGGGCAGGTG 61.091 72.222 0.00 0.00 0.00 4.00
155 156 3.622263 TGGGGGTCTAGGGCAGGT 61.622 66.667 0.00 0.00 0.00 4.00
156 157 3.090532 GTGGGGGTCTAGGGCAGG 61.091 72.222 0.00 0.00 0.00 4.85
157 158 3.090532 GGTGGGGGTCTAGGGCAG 61.091 72.222 0.00 0.00 0.00 4.85
158 159 4.752594 GGGTGGGGGTCTAGGGCA 62.753 72.222 0.00 0.00 0.00 5.36
159 160 4.752594 TGGGTGGGGGTCTAGGGC 62.753 72.222 0.00 0.00 0.00 5.19
160 161 2.366972 CTGGGTGGGGGTCTAGGG 60.367 72.222 0.00 0.00 0.00 3.53
161 162 3.090532 GCTGGGTGGGGGTCTAGG 61.091 72.222 0.00 0.00 0.00 3.02
162 163 2.285368 TGCTGGGTGGGGGTCTAG 60.285 66.667 0.00 0.00 0.00 2.43
163 164 2.609610 GTGCTGGGTGGGGGTCTA 60.610 66.667 0.00 0.00 0.00 2.59
168 169 4.666253 CAGTGGTGCTGGGTGGGG 62.666 72.222 0.00 0.00 41.42 4.96
182 183 0.116143 AGAGAGGCCACTTCTCCAGT 59.884 55.000 15.10 0.00 35.35 4.00
183 184 2.031120 CTAGAGAGGCCACTTCTCCAG 58.969 57.143 15.10 8.78 31.96 3.86
184 185 1.962402 GCTAGAGAGGCCACTTCTCCA 60.962 57.143 15.10 3.12 31.96 3.86
185 186 0.750249 GCTAGAGAGGCCACTTCTCC 59.250 60.000 15.10 0.00 31.96 3.71
207 208 4.161295 TTCCATCTCCTGCGGCGG 62.161 66.667 9.78 0.65 0.00 6.13
208 209 2.892425 GTTCCATCTCCTGCGGCG 60.892 66.667 0.51 0.51 0.00 6.46
209 210 2.514824 GGTTCCATCTCCTGCGGC 60.515 66.667 0.00 0.00 0.00 6.53
210 211 2.202932 CGGTTCCATCTCCTGCGG 60.203 66.667 0.00 0.00 0.00 5.69
211 212 2.202932 CCGGTTCCATCTCCTGCG 60.203 66.667 0.00 0.00 0.00 5.18
212 213 2.190578 CCCGGTTCCATCTCCTGC 59.809 66.667 0.00 0.00 0.00 4.85
213 214 2.911143 CCCCGGTTCCATCTCCTG 59.089 66.667 0.00 0.00 0.00 3.86
214 215 3.090532 GCCCCGGTTCCATCTCCT 61.091 66.667 0.00 0.00 0.00 3.69
215 216 4.191015 GGCCCCGGTTCCATCTCC 62.191 72.222 0.00 0.00 0.00 3.71
216 217 3.407967 TGGCCCCGGTTCCATCTC 61.408 66.667 0.00 0.00 0.00 2.75
217 218 2.833151 TAGTGGCCCCGGTTCCATCT 62.833 60.000 14.09 14.10 34.47 2.90
218 219 2.325393 CTAGTGGCCCCGGTTCCATC 62.325 65.000 14.09 8.74 34.47 3.51
219 220 2.285818 TAGTGGCCCCGGTTCCAT 60.286 61.111 14.09 7.12 34.47 3.41
220 221 3.006728 CTAGTGGCCCCGGTTCCA 61.007 66.667 0.00 7.74 0.00 3.53
221 222 2.686106 TCTAGTGGCCCCGGTTCC 60.686 66.667 0.00 0.70 0.00 3.62
222 223 2.582978 GTCTAGTGGCCCCGGTTC 59.417 66.667 0.00 0.00 0.00 3.62
223 224 3.007323 GGTCTAGTGGCCCCGGTT 61.007 66.667 0.00 0.00 0.00 4.44
226 227 3.470888 CTGGGTCTAGTGGCCCCG 61.471 72.222 0.00 6.95 44.20 5.73
227 228 2.040606 TCTGGGTCTAGTGGCCCC 59.959 66.667 0.00 9.07 44.20 5.80
228 229 2.722201 CGTCTGGGTCTAGTGGCCC 61.722 68.421 0.00 11.21 45.04 5.80
229 230 2.722201 CCGTCTGGGTCTAGTGGCC 61.722 68.421 0.00 0.00 0.00 5.36
230 231 2.893398 CCGTCTGGGTCTAGTGGC 59.107 66.667 0.00 0.00 0.00 5.01
231 232 2.722201 GGCCGTCTGGGTCTAGTGG 61.722 68.421 0.00 0.00 37.47 4.00
232 233 2.893398 GGCCGTCTGGGTCTAGTG 59.107 66.667 0.00 0.00 37.47 2.74
241 242 4.101448 CTTGGGGGAGGCCGTCTG 62.101 72.222 0.00 0.00 0.00 3.51
265 266 0.247974 AGATTTAGACGCCGACGACG 60.248 55.000 0.85 0.85 43.93 5.12
266 267 1.582502 CAAGATTTAGACGCCGACGAC 59.417 52.381 0.00 0.00 43.93 4.34
267 268 1.469703 TCAAGATTTAGACGCCGACGA 59.530 47.619 0.00 0.00 43.93 4.20
269 270 3.487574 CAGATCAAGATTTAGACGCCGAC 59.512 47.826 0.00 0.00 0.00 4.79
270 271 3.706698 CAGATCAAGATTTAGACGCCGA 58.293 45.455 0.00 0.00 0.00 5.54
271 272 2.219674 GCAGATCAAGATTTAGACGCCG 59.780 50.000 0.00 0.00 0.00 6.46
272 273 3.462021 AGCAGATCAAGATTTAGACGCC 58.538 45.455 0.00 0.00 0.00 5.68
273 274 5.751028 ACTTAGCAGATCAAGATTTAGACGC 59.249 40.000 0.00 0.00 0.00 5.19
274 275 6.754209 ACACTTAGCAGATCAAGATTTAGACG 59.246 38.462 0.00 0.00 0.00 4.18
275 276 9.243637 CTACACTTAGCAGATCAAGATTTAGAC 57.756 37.037 0.00 0.00 0.00 2.59
276 277 8.972127 ACTACACTTAGCAGATCAAGATTTAGA 58.028 33.333 0.00 0.00 0.00 2.10
320 321 0.320771 AGGTTGATCGTGCTGGTGAC 60.321 55.000 0.00 0.00 0.00 3.67
367 368 4.614993 CGTTTACAACATGGTTGATGGGAC 60.615 45.833 15.35 6.12 36.23 4.46
390 396 3.242316 GGTCAGAGAAACGACAAACACAC 60.242 47.826 0.00 0.00 33.66 3.82
393 399 3.536956 AGGTCAGAGAAACGACAAACA 57.463 42.857 0.00 0.00 33.66 2.83
430 436 6.692486 AGTTGTTCGTCTAATCAGTCTTCAT 58.308 36.000 0.00 0.00 0.00 2.57
431 437 6.085555 AGTTGTTCGTCTAATCAGTCTTCA 57.914 37.500 0.00 0.00 0.00 3.02
432 438 6.150318 TGAGTTGTTCGTCTAATCAGTCTTC 58.850 40.000 0.00 0.00 0.00 2.87
433 439 6.085555 TGAGTTGTTCGTCTAATCAGTCTT 57.914 37.500 0.00 0.00 0.00 3.01
434 440 5.707242 TGAGTTGTTCGTCTAATCAGTCT 57.293 39.130 0.00 0.00 0.00 3.24
478 484 1.153061 ACCGTGAGAGGAGGTGTCA 59.847 57.895 0.00 0.00 36.81 3.58
483 489 1.763968 TACATCACCGTGAGAGGAGG 58.236 55.000 7.41 0.00 34.73 4.30
496 502 2.225382 TGGAGAGACCGGTTACATCA 57.775 50.000 9.42 2.35 42.61 3.07
561 567 0.983467 TGCTGAAGCTACACCATCCA 59.017 50.000 3.61 0.00 42.66 3.41
593 599 1.697432 ACGGACAGTTCTTCCAATCCA 59.303 47.619 0.00 0.00 31.94 3.41
594 600 2.474410 ACGGACAGTTCTTCCAATCC 57.526 50.000 0.00 0.00 31.94 3.01
595 601 3.678548 GTGTACGGACAGTTCTTCCAATC 59.321 47.826 0.00 0.00 35.82 2.67
669 682 1.409427 GTACTGTGCTCGCCTCCTATT 59.591 52.381 0.00 0.00 0.00 1.73
689 702 1.515081 CAAGCCCACTTGCAAAATGG 58.485 50.000 18.57 18.57 46.38 3.16
705 718 1.771073 TTCACGCGTGCAAGGACAAG 61.771 55.000 33.63 6.98 0.00 3.16
725 738 2.370349 CCTCGTGAGACACCAGTAGAT 58.630 52.381 0.00 0.00 35.39 1.98
728 741 0.251209 AGCCTCGTGAGACACCAGTA 60.251 55.000 0.00 0.00 35.39 2.74
813 847 2.047844 CCAGGAGCCACACGTGAG 60.048 66.667 25.01 15.20 0.00 3.51
814 848 3.625897 CCCAGGAGCCACACGTGA 61.626 66.667 25.01 0.00 0.00 4.35
864 910 2.242043 CATTCCTTTCTGGGTTGCAGT 58.758 47.619 0.00 0.00 36.20 4.40
865 911 2.229784 GACATTCCTTTCTGGGTTGCAG 59.770 50.000 0.00 0.00 36.20 4.41
866 912 2.238521 GACATTCCTTTCTGGGTTGCA 58.761 47.619 0.00 0.00 36.20 4.08
867 913 1.546029 GGACATTCCTTTCTGGGTTGC 59.454 52.381 0.00 0.00 36.20 4.17
868 914 1.812571 CGGACATTCCTTTCTGGGTTG 59.187 52.381 0.00 0.00 33.30 3.77
869 915 1.271926 CCGGACATTCCTTTCTGGGTT 60.272 52.381 0.00 0.00 34.94 4.11
877 923 2.267961 GGTCGCCGGACATTCCTT 59.732 61.111 5.05 0.00 45.28 3.36
888 934 1.076332 GAATACACACACAGGTCGCC 58.924 55.000 0.00 0.00 0.00 5.54
907 953 8.780846 AGTCAGAGTTCCGTATATATAGAGTG 57.219 38.462 0.00 0.00 0.00 3.51
976 1022 1.446792 CGACCGATGTGCAGAAGCT 60.447 57.895 0.00 0.00 42.74 3.74
1016 1062 0.872388 GCCGGGCAGATTAATTACGG 59.128 55.000 15.62 0.00 42.47 4.02
1035 1081 3.591835 GGCGGCGAGAGAGGAGAG 61.592 72.222 12.98 0.00 0.00 3.20
1157 1206 0.736636 ACGACCAAGATGCATGCATG 59.263 50.000 36.73 23.71 36.70 4.06
1158 1207 1.019673 GACGACCAAGATGCATGCAT 58.980 50.000 32.66 32.66 39.69 3.96
1159 1208 0.036105 AGACGACCAAGATGCATGCA 60.036 50.000 25.04 25.04 0.00 3.96
1160 1209 0.654683 GAGACGACCAAGATGCATGC 59.345 55.000 11.82 11.82 0.00 4.06
1230 1393 9.737427 GACTGATTAATCTATTTCTCTCGAACA 57.263 33.333 16.24 0.00 0.00 3.18
1270 1433 8.726988 TGTTGTAAAGAACACCATTAGCTAATC 58.273 33.333 16.21 5.26 38.00 1.75
1352 1515 4.321718 TCGCTTCGTATATACTACCAGCT 58.678 43.478 11.05 0.00 0.00 4.24
1368 1531 4.877282 AGTAATCAGGAATAGCTCGCTTC 58.123 43.478 0.00 0.00 0.00 3.86
1371 1534 5.379732 AGTAGTAATCAGGAATAGCTCGC 57.620 43.478 0.00 0.00 0.00 5.03
1372 1535 5.708230 AGGAGTAGTAATCAGGAATAGCTCG 59.292 44.000 0.00 0.00 0.00 5.03
1373 1536 7.886446 AGTAGGAGTAGTAATCAGGAATAGCTC 59.114 40.741 0.00 0.00 0.00 4.09
1374 1537 7.761608 AGTAGGAGTAGTAATCAGGAATAGCT 58.238 38.462 0.00 0.00 0.00 3.32
1375 1538 9.517868 TTAGTAGGAGTAGTAATCAGGAATAGC 57.482 37.037 0.00 0.00 0.00 2.97
1642 1881 2.919328 GCAGGCAAAGGCAAGGGT 60.919 61.111 0.00 0.00 43.71 4.34
1668 1907 0.378257 CGTTGGGAAGCATTGGATCG 59.622 55.000 0.00 0.00 0.00 3.69
1693 1932 8.675705 TGGATAGTTGGTGATGTATATTTGTG 57.324 34.615 0.00 0.00 0.00 3.33
1833 2072 5.520288 ACAAAGAACCGATCGACTAATCATG 59.480 40.000 18.66 8.25 0.00 3.07
1879 2120 0.832135 TGTCAGACACCCTCTCACCC 60.832 60.000 0.00 0.00 0.00 4.61
1932 2173 1.000385 GTCTCCAGCATGATCTCCTCG 60.000 57.143 0.00 0.00 39.69 4.63
1950 2191 0.729116 CCATTGCACATGTCTCCGTC 59.271 55.000 0.00 0.00 0.00 4.79
1965 2206 6.998074 TCATCCTTAAGATACGAAATGCCATT 59.002 34.615 3.36 0.00 32.37 3.16
1981 2222 3.378112 ACGTCGTATCCGTTCATCCTTAA 59.622 43.478 0.00 0.00 34.28 1.85
2019 2264 1.900245 TGGCGGGACTAAAAGGAAAC 58.100 50.000 0.00 0.00 0.00 2.78
2033 2282 5.402270 GCAAGCTAACAATATATTTTGGCGG 59.598 40.000 10.17 14.12 0.00 6.13
2122 2376 9.570488 CGAACTTAGCTAAACTATCACTAACTT 57.430 33.333 7.74 0.00 0.00 2.66
2123 2377 8.738106 ACGAACTTAGCTAAACTATCACTAACT 58.262 33.333 7.74 0.00 0.00 2.24
2124 2378 8.908172 ACGAACTTAGCTAAACTATCACTAAC 57.092 34.615 7.74 0.00 0.00 2.34
2127 2381 8.954350 TCTAACGAACTTAGCTAAACTATCACT 58.046 33.333 7.74 0.00 32.98 3.41
2128 2382 9.224058 CTCTAACGAACTTAGCTAAACTATCAC 57.776 37.037 7.74 0.00 32.98 3.06
2129 2383 8.954350 ACTCTAACGAACTTAGCTAAACTATCA 58.046 33.333 7.74 0.00 32.98 2.15
2130 2384 9.786105 AACTCTAACGAACTTAGCTAAACTATC 57.214 33.333 7.74 3.04 32.98 2.08
2131 2385 9.570488 CAACTCTAACGAACTTAGCTAAACTAT 57.430 33.333 7.74 0.00 32.98 2.12
2132 2386 8.786898 TCAACTCTAACGAACTTAGCTAAACTA 58.213 33.333 7.74 0.00 32.98 2.24
2133 2387 7.655490 TCAACTCTAACGAACTTAGCTAAACT 58.345 34.615 7.74 0.00 32.98 2.66
2134 2388 7.062022 CCTCAACTCTAACGAACTTAGCTAAAC 59.938 40.741 7.74 1.76 32.98 2.01
2135 2389 7.088905 CCTCAACTCTAACGAACTTAGCTAAA 58.911 38.462 7.74 0.00 32.98 1.85
2136 2390 6.349944 CCCTCAACTCTAACGAACTTAGCTAA 60.350 42.308 5.94 5.94 32.98 3.09
2137 2391 5.125097 CCCTCAACTCTAACGAACTTAGCTA 59.875 44.000 0.00 0.00 32.98 3.32
2138 2392 4.082136 CCCTCAACTCTAACGAACTTAGCT 60.082 45.833 0.00 0.00 32.98 3.32
2139 2393 4.174762 CCCTCAACTCTAACGAACTTAGC 58.825 47.826 0.00 0.00 32.98 3.09
2140 2394 4.174762 GCCCTCAACTCTAACGAACTTAG 58.825 47.826 0.00 0.00 34.12 2.18
2141 2395 3.575256 TGCCCTCAACTCTAACGAACTTA 59.425 43.478 0.00 0.00 0.00 2.24
2142 2396 2.367567 TGCCCTCAACTCTAACGAACTT 59.632 45.455 0.00 0.00 0.00 2.66
2143 2397 1.968493 TGCCCTCAACTCTAACGAACT 59.032 47.619 0.00 0.00 0.00 3.01
2144 2398 2.029290 TCTGCCCTCAACTCTAACGAAC 60.029 50.000 0.00 0.00 0.00 3.95
2145 2399 2.244695 TCTGCCCTCAACTCTAACGAA 58.755 47.619 0.00 0.00 0.00 3.85
2146 2400 1.919240 TCTGCCCTCAACTCTAACGA 58.081 50.000 0.00 0.00 0.00 3.85
2147 2401 2.028930 AGTTCTGCCCTCAACTCTAACG 60.029 50.000 0.00 0.00 0.00 3.18
2148 2402 3.686916 AGTTCTGCCCTCAACTCTAAC 57.313 47.619 0.00 0.00 0.00 2.34
2149 2403 5.023452 TCATAGTTCTGCCCTCAACTCTAA 58.977 41.667 0.00 0.00 34.60 2.10
2150 2404 4.402793 GTCATAGTTCTGCCCTCAACTCTA 59.597 45.833 0.00 0.00 34.60 2.43
2151 2405 3.196685 GTCATAGTTCTGCCCTCAACTCT 59.803 47.826 0.00 0.00 34.60 3.24
2152 2406 3.055819 TGTCATAGTTCTGCCCTCAACTC 60.056 47.826 0.00 0.00 34.60 3.01
2153 2407 2.906389 TGTCATAGTTCTGCCCTCAACT 59.094 45.455 0.00 0.00 36.75 3.16
2154 2408 3.003480 GTGTCATAGTTCTGCCCTCAAC 58.997 50.000 0.00 0.00 0.00 3.18
2155 2409 2.353704 CGTGTCATAGTTCTGCCCTCAA 60.354 50.000 0.00 0.00 0.00 3.02
2156 2410 1.204704 CGTGTCATAGTTCTGCCCTCA 59.795 52.381 0.00 0.00 0.00 3.86
2157 2411 1.471676 CCGTGTCATAGTTCTGCCCTC 60.472 57.143 0.00 0.00 0.00 4.30
2158 2412 0.537188 CCGTGTCATAGTTCTGCCCT 59.463 55.000 0.00 0.00 0.00 5.19
2159 2413 0.249398 ACCGTGTCATAGTTCTGCCC 59.751 55.000 0.00 0.00 0.00 5.36
2160 2414 2.094762 AACCGTGTCATAGTTCTGCC 57.905 50.000 0.00 0.00 0.00 4.85
2161 2415 3.187700 CCTAACCGTGTCATAGTTCTGC 58.812 50.000 0.00 0.00 0.00 4.26
2162 2416 3.194968 ACCCTAACCGTGTCATAGTTCTG 59.805 47.826 0.00 0.00 0.00 3.02
2163 2417 3.438183 ACCCTAACCGTGTCATAGTTCT 58.562 45.455 0.00 0.00 0.00 3.01
2164 2418 3.446516 AGACCCTAACCGTGTCATAGTTC 59.553 47.826 0.00 0.00 0.00 3.01
2165 2419 3.194968 CAGACCCTAACCGTGTCATAGTT 59.805 47.826 0.00 0.00 0.00 2.24
2166 2420 2.758979 CAGACCCTAACCGTGTCATAGT 59.241 50.000 0.00 0.00 0.00 2.12
2167 2421 2.100916 CCAGACCCTAACCGTGTCATAG 59.899 54.545 0.00 0.00 0.00 2.23
2168 2422 2.104967 CCAGACCCTAACCGTGTCATA 58.895 52.381 0.00 0.00 0.00 2.15
2169 2423 0.902531 CCAGACCCTAACCGTGTCAT 59.097 55.000 0.00 0.00 0.00 3.06
2170 2424 1.823169 GCCAGACCCTAACCGTGTCA 61.823 60.000 0.00 0.00 0.00 3.58
2171 2425 1.079336 GCCAGACCCTAACCGTGTC 60.079 63.158 0.00 0.00 0.00 3.67
2172 2426 2.590114 GGCCAGACCCTAACCGTGT 61.590 63.158 0.00 0.00 0.00 4.49
2173 2427 2.267961 GGCCAGACCCTAACCGTG 59.732 66.667 0.00 0.00 0.00 4.94
2182 2436 4.324991 AAACGTCCGGGCCAGACC 62.325 66.667 14.16 1.24 37.93 3.85
2183 2437 2.726822 AAGAAACGTCCGGGCCAGAC 62.727 60.000 9.97 9.97 0.00 3.51
2184 2438 2.047213 AAAGAAACGTCCGGGCCAGA 62.047 55.000 4.39 0.00 0.00 3.86
2185 2439 0.320946 TAAAGAAACGTCCGGGCCAG 60.321 55.000 4.39 0.00 0.00 4.85
2186 2440 0.108207 TTAAAGAAACGTCCGGGCCA 59.892 50.000 4.39 0.00 0.00 5.36
2187 2441 0.518636 GTTAAAGAAACGTCCGGGCC 59.481 55.000 0.00 0.00 0.00 5.80
2188 2442 1.462283 GAGTTAAAGAAACGTCCGGGC 59.538 52.381 0.00 0.00 43.29 6.13
2189 2443 3.036075 AGAGTTAAAGAAACGTCCGGG 57.964 47.619 0.00 0.00 43.29 5.73
2190 2444 3.611549 GCTAGAGTTAAAGAAACGTCCGG 59.388 47.826 0.00 0.00 43.29 5.14
2191 2445 4.483311 AGCTAGAGTTAAAGAAACGTCCG 58.517 43.478 0.00 0.00 43.29 4.79
2192 2446 5.467705 TGAGCTAGAGTTAAAGAAACGTCC 58.532 41.667 0.00 0.00 43.29 4.79
2193 2447 6.862090 TCTTGAGCTAGAGTTAAAGAAACGTC 59.138 38.462 0.00 0.00 43.29 4.34
2194 2448 6.746120 TCTTGAGCTAGAGTTAAAGAAACGT 58.254 36.000 0.00 0.00 43.29 3.99
2195 2449 7.542477 TCATCTTGAGCTAGAGTTAAAGAAACG 59.458 37.037 0.00 0.00 43.29 3.60
2196 2450 8.764524 TCATCTTGAGCTAGAGTTAAAGAAAC 57.235 34.615 0.00 0.00 38.46 2.78
2197 2451 9.950496 AATCATCTTGAGCTAGAGTTAAAGAAA 57.050 29.630 0.00 0.00 0.00 2.52
2198 2452 9.376075 CAATCATCTTGAGCTAGAGTTAAAGAA 57.624 33.333 0.00 0.00 0.00 2.52
2199 2453 8.535335 ACAATCATCTTGAGCTAGAGTTAAAGA 58.465 33.333 0.00 0.00 0.00 2.52
2200 2454 8.715191 ACAATCATCTTGAGCTAGAGTTAAAG 57.285 34.615 0.00 0.00 0.00 1.85
2202 2456 9.809096 CTTACAATCATCTTGAGCTAGAGTTAA 57.191 33.333 0.00 0.00 0.00 2.01
2203 2457 8.417106 CCTTACAATCATCTTGAGCTAGAGTTA 58.583 37.037 0.00 0.00 0.00 2.24
2204 2458 7.124901 TCCTTACAATCATCTTGAGCTAGAGTT 59.875 37.037 0.00 0.00 0.00 3.01
2205 2459 6.609212 TCCTTACAATCATCTTGAGCTAGAGT 59.391 38.462 0.00 0.00 0.00 3.24
2206 2460 6.922957 GTCCTTACAATCATCTTGAGCTAGAG 59.077 42.308 0.00 0.00 0.00 2.43
2207 2461 6.183360 GGTCCTTACAATCATCTTGAGCTAGA 60.183 42.308 0.00 0.00 0.00 2.43
2208 2462 5.988561 GGTCCTTACAATCATCTTGAGCTAG 59.011 44.000 0.00 0.00 0.00 3.42
2209 2463 5.663106 AGGTCCTTACAATCATCTTGAGCTA 59.337 40.000 0.00 0.00 0.00 3.32
2210 2464 4.472833 AGGTCCTTACAATCATCTTGAGCT 59.527 41.667 0.00 0.00 0.00 4.09
2211 2465 4.775236 AGGTCCTTACAATCATCTTGAGC 58.225 43.478 0.00 0.00 0.00 4.26
2212 2466 6.176183 ACAAGGTCCTTACAATCATCTTGAG 58.824 40.000 3.08 0.00 35.64 3.02
2213 2467 6.126863 ACAAGGTCCTTACAATCATCTTGA 57.873 37.500 3.08 0.00 35.64 3.02
2214 2468 7.921786 TTACAAGGTCCTTACAATCATCTTG 57.078 36.000 3.08 0.00 37.12 3.02
2215 2469 8.960591 CAATTACAAGGTCCTTACAATCATCTT 58.039 33.333 3.08 0.00 0.00 2.40
2216 2470 8.328758 TCAATTACAAGGTCCTTACAATCATCT 58.671 33.333 3.08 0.00 0.00 2.90
2217 2471 8.398665 GTCAATTACAAGGTCCTTACAATCATC 58.601 37.037 3.08 0.00 0.00 2.92
2218 2472 8.109634 AGTCAATTACAAGGTCCTTACAATCAT 58.890 33.333 3.08 0.00 0.00 2.45
2219 2473 7.458397 AGTCAATTACAAGGTCCTTACAATCA 58.542 34.615 3.08 0.00 0.00 2.57
2220 2474 7.923414 AGTCAATTACAAGGTCCTTACAATC 57.077 36.000 3.08 0.00 0.00 2.67
2221 2475 9.975218 ATTAGTCAATTACAAGGTCCTTACAAT 57.025 29.630 3.08 4.07 0.00 2.71
2223 2477 9.880157 GTATTAGTCAATTACAAGGTCCTTACA 57.120 33.333 3.08 0.00 0.00 2.41
2224 2478 9.880157 TGTATTAGTCAATTACAAGGTCCTTAC 57.120 33.333 3.08 0.00 0.00 2.34
2226 2480 9.975218 ATTGTATTAGTCAATTACAAGGTCCTT 57.025 29.630 0.00 0.00 34.66 3.36
2227 2481 9.396022 CATTGTATTAGTCAATTACAAGGTCCT 57.604 33.333 0.00 0.00 34.66 3.85
2228 2482 9.174166 ACATTGTATTAGTCAATTACAAGGTCC 57.826 33.333 6.54 0.00 40.19 4.46
2236 2490 9.391006 GGGTGAGAACATTGTATTAGTCAATTA 57.609 33.333 0.00 0.00 33.92 1.40
2237 2491 7.065803 CGGGTGAGAACATTGTATTAGTCAATT 59.934 37.037 0.00 0.00 33.92 2.32
2238 2492 6.538742 CGGGTGAGAACATTGTATTAGTCAAT 59.461 38.462 0.00 0.00 36.16 2.57
2239 2493 5.872617 CGGGTGAGAACATTGTATTAGTCAA 59.127 40.000 0.00 0.00 0.00 3.18
2240 2494 5.416083 CGGGTGAGAACATTGTATTAGTCA 58.584 41.667 0.00 0.00 0.00 3.41
2241 2495 4.270325 GCGGGTGAGAACATTGTATTAGTC 59.730 45.833 0.00 0.00 0.00 2.59
2242 2496 4.189231 GCGGGTGAGAACATTGTATTAGT 58.811 43.478 0.00 0.00 0.00 2.24
2243 2497 4.188462 TGCGGGTGAGAACATTGTATTAG 58.812 43.478 0.00 0.00 0.00 1.73
2244 2498 4.209307 TGCGGGTGAGAACATTGTATTA 57.791 40.909 0.00 0.00 0.00 0.98
2245 2499 3.066291 TGCGGGTGAGAACATTGTATT 57.934 42.857 0.00 0.00 0.00 1.89
2246 2500 2.779755 TGCGGGTGAGAACATTGTAT 57.220 45.000 0.00 0.00 0.00 2.29
2247 2501 2.552599 TTGCGGGTGAGAACATTGTA 57.447 45.000 0.00 0.00 0.00 2.41
2248 2502 1.686355 TTTGCGGGTGAGAACATTGT 58.314 45.000 0.00 0.00 0.00 2.71
2249 2503 2.791383 TTTTGCGGGTGAGAACATTG 57.209 45.000 0.00 0.00 0.00 2.82
2567 2822 6.583427 GGGTACAAATATGTTTTCGGTTGAAC 59.417 38.462 0.00 0.00 41.05 3.18
2568 2823 6.264744 TGGGTACAAATATGTTTTCGGTTGAA 59.735 34.615 0.00 0.00 41.05 2.69
2574 2829 6.489127 TGAGTGGGTACAAATATGTTTTCG 57.511 37.500 0.00 0.00 41.05 3.46
2576 2831 6.263617 ACGTTGAGTGGGTACAAATATGTTTT 59.736 34.615 0.00 0.00 41.05 2.43
2584 2839 3.607741 TGAAACGTTGAGTGGGTACAAA 58.392 40.909 0.00 0.00 0.00 2.83
2594 2849 6.642950 CCTAAGGCTATCTATGAAACGTTGAG 59.357 42.308 0.00 0.00 0.00 3.02
2595 2850 6.322969 TCCTAAGGCTATCTATGAAACGTTGA 59.677 38.462 0.00 0.00 0.00 3.18
2627 2882 4.872691 CACACTGAAGATCTATCACAACCC 59.127 45.833 0.00 0.00 0.00 4.11
2638 2901 3.026630 TGACGGTTCACACTGAAGATC 57.973 47.619 0.00 0.00 37.00 2.75
2703 2967 5.615925 AGAGTTAGTGTCCAACAAAGTCT 57.384 39.130 0.00 0.00 28.77 3.24
2716 2982 6.749578 CACTGAGCATACAAGTAGAGTTAGTG 59.250 42.308 0.00 0.00 0.00 2.74
2769 3035 6.680874 TTGTTCTACGGTCAAAGCTAAAAA 57.319 33.333 0.00 0.00 0.00 1.94
2770 3036 6.870971 ATTGTTCTACGGTCAAAGCTAAAA 57.129 33.333 0.00 0.00 0.00 1.52
2771 3037 6.261381 ACAATTGTTCTACGGTCAAAGCTAAA 59.739 34.615 4.92 0.00 0.00 1.85
2772 3038 5.761234 ACAATTGTTCTACGGTCAAAGCTAA 59.239 36.000 4.92 0.00 0.00 3.09
2773 3039 5.302360 ACAATTGTTCTACGGTCAAAGCTA 58.698 37.500 4.92 0.00 0.00 3.32
2774 3040 4.134563 ACAATTGTTCTACGGTCAAAGCT 58.865 39.130 4.92 0.00 0.00 3.74
2775 3041 4.483476 ACAATTGTTCTACGGTCAAAGC 57.517 40.909 4.92 0.00 0.00 3.51
2827 3093 7.759433 ACCTATAACAACACAAAAGCATATTGC 59.241 33.333 0.00 0.00 45.46 3.56
2870 3136 2.421529 CCAATGTAGTGTAGAAGGGGCC 60.422 54.545 0.00 0.00 0.00 5.80
2887 3153 4.215908 TCTTATGCTCTAGACGGTCCAAT 58.784 43.478 4.14 0.00 0.00 3.16
3006 3272 8.673711 TGTAATAACATTGGTGTCTTATGAAGC 58.326 33.333 0.00 0.00 37.67 3.86
3200 3468 7.224557 CCAACTACCATGAAAGGAAACAAAAAG 59.775 37.037 0.00 0.00 0.00 2.27
3471 3739 9.696917 AAGTAGAAGAAACCAAATATTGCTTTG 57.303 29.630 0.00 0.00 36.17 2.77
3528 3796 7.514721 TGTTTGGAGTAGTACTGAATTTCCTT 58.485 34.615 7.76 0.00 0.00 3.36
3904 4176 6.203145 GCTCGTTATACTCAGTATCTCTGACA 59.797 42.308 0.00 0.00 46.77 3.58
3979 4251 2.159282 ACTTTGGCGTGATACCTCGTAG 60.159 50.000 0.00 0.00 0.00 3.51
3991 4263 5.722021 ATTAAAATCAGGAACTTTGGCGT 57.278 34.783 0.00 0.00 34.60 5.68
4016 4288 8.786826 TCTCGACAAGATAATAAACACCATTT 57.213 30.769 0.00 0.00 0.00 2.32
4071 4343 8.116026 ACTATTTTCCCTTGGAGTGTGATAATT 58.884 33.333 0.00 0.00 31.21 1.40
4097 4369 1.047801 TCCTTAGCCATGCGATGCTA 58.952 50.000 0.00 0.00 39.00 3.49
4100 4372 3.996150 AATTTCCTTAGCCATGCGATG 57.004 42.857 0.00 0.00 0.00 3.84
4102 4374 4.887071 ACAATAATTTCCTTAGCCATGCGA 59.113 37.500 0.00 0.00 0.00 5.10
4103 4375 5.186996 ACAATAATTTCCTTAGCCATGCG 57.813 39.130 0.00 0.00 0.00 4.73
4104 4376 6.340522 ACAACAATAATTTCCTTAGCCATGC 58.659 36.000 0.00 0.00 0.00 4.06
4105 4377 8.034215 TCAACAACAATAATTTCCTTAGCCATG 58.966 33.333 0.00 0.00 0.00 3.66
4108 4380 7.602753 AGTCAACAACAATAATTTCCTTAGCC 58.397 34.615 0.00 0.00 0.00 3.93
4139 4413 4.524714 CCATCGATGTACTCCCTCTACAAT 59.475 45.833 23.27 0.00 0.00 2.71
4219 4493 0.689080 CAGCTCTTCCCTGGCCTCTA 60.689 60.000 3.32 0.00 0.00 2.43
4230 4504 2.124778 GGGCTCCTGCAGCTCTTC 60.125 66.667 8.66 0.00 46.57 2.87
4236 4510 0.179062 GTGTCTATGGGCTCCTGCAG 60.179 60.000 6.78 6.78 41.91 4.41
4365 4639 0.667792 GAGCTGAACGCGTCTCCTTT 60.668 55.000 14.44 0.00 45.59 3.11
4443 4717 3.117474 TCGAGACCAGGGAGTAGATTCAT 60.117 47.826 0.00 0.00 0.00 2.57
4453 4727 0.898789 GGACAAGTCGAGACCAGGGA 60.899 60.000 0.00 0.00 0.00 4.20
4649 4951 7.832685 GGGGTAGGTAAAAATAGACAATGTCTT 59.167 37.037 21.83 5.48 40.28 3.01
4752 5054 4.730949 AAACATGAATTGGGCAGATCTG 57.269 40.909 18.84 18.84 0.00 2.90
4757 5059 2.302445 TGGGAAAACATGAATTGGGCAG 59.698 45.455 0.00 0.00 0.00 4.85
4799 5101 3.056821 AGTCACAATTACAGCTCTACGCA 60.057 43.478 0.00 0.00 42.61 5.24
4859 5161 6.713903 AGAGTGAAAAGAAAGAATGCAGATCA 59.286 34.615 0.00 0.00 0.00 2.92
4903 5206 5.689383 TGAAATACCACTTGAAGCAAGAC 57.311 39.130 13.56 0.00 43.42 3.01
4908 5211 4.278419 ACCACTTGAAATACCACTTGAAGC 59.722 41.667 0.00 0.00 0.00 3.86
4915 5218 1.877443 ACGCACCACTTGAAATACCAC 59.123 47.619 0.00 0.00 0.00 4.16
4916 5219 1.876799 CACGCACCACTTGAAATACCA 59.123 47.619 0.00 0.00 0.00 3.25
4917 5220 1.877443 ACACGCACCACTTGAAATACC 59.123 47.619 0.00 0.00 0.00 2.73
4918 5221 3.002862 TCAACACGCACCACTTGAAATAC 59.997 43.478 0.00 0.00 0.00 1.89
4919 5222 3.206964 TCAACACGCACCACTTGAAATA 58.793 40.909 0.00 0.00 0.00 1.40
4920 5223 2.020720 TCAACACGCACCACTTGAAAT 58.979 42.857 0.00 0.00 0.00 2.17
4921 5224 1.454201 TCAACACGCACCACTTGAAA 58.546 45.000 0.00 0.00 0.00 2.69
4922 5225 1.400142 CTTCAACACGCACCACTTGAA 59.600 47.619 0.00 0.00 32.90 2.69
4923 5226 1.013596 CTTCAACACGCACCACTTGA 58.986 50.000 0.00 0.00 0.00 3.02
4924 5227 0.592247 GCTTCAACACGCACCACTTG 60.592 55.000 0.00 0.00 0.00 3.16
4930 5243 0.663153 AGGAAAGCTTCAACACGCAC 59.337 50.000 0.00 0.00 0.00 5.34
5004 5317 6.542852 GCGTAAAGAAATTGCTCTTGATGTA 58.457 36.000 0.00 0.00 35.79 2.29
5078 5391 3.979101 ATTCCATTTCGCCCAACAAAT 57.021 38.095 0.00 0.00 0.00 2.32
5103 5416 3.603158 TGTGATACCGCTCAAAGCTTA 57.397 42.857 0.00 0.00 39.60 3.09
5115 5428 6.890293 AGATCTTTTCTAGGGTTGTGATACC 58.110 40.000 0.00 0.00 33.16 2.73
5138 5451 8.335532 TGATAACATTGAAGAAACAACCCTAG 57.664 34.615 0.00 0.00 32.50 3.02
5299 5628 2.198827 TGGGACCATACAAAGCACAG 57.801 50.000 0.00 0.00 0.00 3.66
5348 5677 3.312421 GCGCACACACATAATAATCAGGT 59.688 43.478 0.30 0.00 0.00 4.00
5373 5702 0.378257 CTTCAGCAAGCGTTGTGTGT 59.622 50.000 0.00 0.00 0.00 3.72
5419 5748 6.096423 AGGCGTCTATAGTGACTTTGTCAATA 59.904 38.462 9.69 9.69 44.91 1.90
5420 5749 5.105310 AGGCGTCTATAGTGACTTTGTCAAT 60.105 40.000 5.97 5.97 44.49 2.57
5426 5755 2.223525 GCGAGGCGTCTATAGTGACTTT 60.224 50.000 4.69 0.00 35.00 2.66
5434 5763 2.375173 TCGATAGCGAGGCGTCTATA 57.625 50.000 0.00 0.00 42.51 1.31
5436 5765 4.764896 TCGATAGCGAGGCGTCTA 57.235 55.556 0.00 0.00 42.51 2.59
5455 5784 2.957402 TCAGTGGAAGGCAATGTTCT 57.043 45.000 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.