Multiple sequence alignment - TraesCS2B01G445200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G445200 chr2B 100.000 7990 0 0 1 7990 638268798 638260809 0.000000e+00 14755.0
1 TraesCS2B01G445200 chr2B 93.340 4970 258 38 2279 7215 637769530 637764601 0.000000e+00 7276.0
2 TraesCS2B01G445200 chr2B 95.703 3654 121 21 1423 5052 638000481 637996840 0.000000e+00 5845.0
3 TraesCS2B01G445200 chr2B 94.787 2954 118 10 5048 7990 637995121 637992193 0.000000e+00 4569.0
4 TraesCS2B01G445200 chr2B 77.396 2181 397 70 4006 6134 638758150 638756014 0.000000e+00 1208.0
5 TraesCS2B01G445200 chr2B 78.741 1604 299 31 3996 5574 637933344 637931758 0.000000e+00 1035.0
6 TraesCS2B01G445200 chr2B 77.385 1897 320 81 3990 5823 729901775 729899925 0.000000e+00 1026.0
7 TraesCS2B01G445200 chr2B 77.600 1625 289 48 3972 5556 643202631 643201042 0.000000e+00 915.0
8 TraesCS2B01G445200 chr2B 94.595 592 28 3 1424 2011 637935892 637935301 0.000000e+00 913.0
9 TraesCS2B01G445200 chr2B 95.565 496 19 3 896 1389 637936383 637935889 0.000000e+00 791.0
10 TraesCS2B01G445200 chr2B 82.724 903 109 28 2832 3714 637707245 637706370 0.000000e+00 760.0
11 TraesCS2B01G445200 chr2B 81.565 754 104 20 5699 6448 637681198 637680476 2.480000e-164 590.0
12 TraesCS2B01G445200 chr2B 87.083 480 53 5 6469 6946 637583011 637582539 1.180000e-147 534.0
13 TraesCS2B01G445200 chr2B 95.502 289 10 1 402 690 637936944 637936659 7.310000e-125 459.0
14 TraesCS2B01G445200 chr2B 92.885 253 16 2 1 252 638519755 638519504 4.560000e-97 366.0
15 TraesCS2B01G445200 chr2B 77.119 590 100 16 3123 3710 637779740 637779184 7.790000e-80 309.0
16 TraesCS2B01G445200 chr2B 79.532 342 68 2 6627 6967 729897199 729896859 8.010000e-60 243.0
17 TraesCS2B01G445200 chr2B 95.946 148 6 0 750 897 637936658 637936511 2.880000e-59 241.0
18 TraesCS2B01G445200 chr2B 94.231 156 6 2 2011 2166 637935267 637935115 1.340000e-57 235.0
19 TraesCS2B01G445200 chr2B 93.151 146 10 0 7208 7353 637707741 637707596 1.750000e-51 215.0
20 TraesCS2B01G445200 chr2B 76.271 354 61 17 966 1301 729904350 729904002 4.960000e-37 167.0
21 TraesCS2B01G445200 chr2B 86.667 150 19 1 7723 7872 638497969 638497821 1.780000e-36 165.0
22 TraesCS2B01G445200 chr2B 85.246 61 5 4 1360 1419 619681388 619681445 8.660000e-05 60.2
23 TraesCS2B01G445200 chr2D 84.699 3235 413 57 3786 6995 536157957 536154780 0.000000e+00 3157.0
24 TraesCS2B01G445200 chr2D 93.686 2059 121 8 4444 6496 536226229 536224174 0.000000e+00 3073.0
25 TraesCS2B01G445200 chr2D 89.806 1599 112 31 2329 3904 536228366 536226796 0.000000e+00 2002.0
26 TraesCS2B01G445200 chr2D 77.167 1892 330 70 3990 5823 599948757 599946910 0.000000e+00 1007.0
27 TraesCS2B01G445200 chr2D 94.435 575 30 2 6545 7118 536224173 536223600 0.000000e+00 883.0
28 TraesCS2B01G445200 chr2D 84.227 951 103 36 2855 3787 536158919 536157998 0.000000e+00 881.0
29 TraesCS2B01G445200 chr2D 90.603 564 52 1 3938 4501 536226791 536226229 0.000000e+00 747.0
30 TraesCS2B01G445200 chr2D 77.660 940 166 27 4654 5574 536384334 536383420 4.240000e-147 532.0
31 TraesCS2B01G445200 chr2D 93.013 229 16 0 7122 7350 536223491 536223263 1.280000e-87 335.0
32 TraesCS2B01G445200 chr2D 79.532 342 68 2 6627 6967 599944971 599944631 8.010000e-60 243.0
33 TraesCS2B01G445200 chr2D 78.571 238 41 8 1072 1301 599951156 599950921 1.800000e-31 148.0
34 TraesCS2B01G445200 chr2D 86.316 95 11 1 6147 6241 536223476 536223384 1.420000e-17 102.0
35 TraesCS2B01G445200 chr2A 85.062 2738 347 45 3833 6553 678969862 678967170 0.000000e+00 2734.0
36 TraesCS2B01G445200 chr2A 77.287 2197 400 74 4006 6145 679265946 679263792 0.000000e+00 1201.0
37 TraesCS2B01G445200 chr2A 77.601 1634 311 37 3972 5574 682613143 682611534 0.000000e+00 939.0
38 TraesCS2B01G445200 chr2A 84.568 972 101 30 2832 3780 678970902 678969957 0.000000e+00 918.0
39 TraesCS2B01G445200 chr2A 75.979 1865 348 76 4006 5814 733685722 733683902 0.000000e+00 870.0
40 TraesCS2B01G445200 chr2A 88.402 388 43 2 6610 6995 678966973 678966586 4.370000e-127 466.0
41 TraesCS2B01G445200 chr2A 81.306 337 61 2 6626 6961 733680906 733680571 1.020000e-68 272.0
42 TraesCS2B01G445200 chr2A 71.814 926 203 40 4381 5286 756952974 756952087 2.260000e-50 211.0
43 TraesCS2B01G445200 chr2A 77.857 280 43 15 2285 2559 733696607 733696872 1.070000e-33 156.0
44 TraesCS2B01G445200 chr2A 84.459 148 23 0 1096 1243 733688020 733687873 6.460000e-31 147.0
45 TraesCS2B01G445200 chr2A 92.157 51 2 2 1382 1430 104112402 104112452 4.000000e-08 71.3
46 TraesCS2B01G445200 chrUn 72.990 1903 398 90 3976 5815 12443690 12441841 1.950000e-155 560.0
47 TraesCS2B01G445200 chrUn 93.333 105 7 0 2174 2278 1181039 1181143 1.070000e-33 156.0
48 TraesCS2B01G445200 chrUn 92.453 106 7 1 2174 2279 299325560 299325456 4.990000e-32 150.0
49 TraesCS2B01G445200 chrUn 88.889 63 5 2 7751 7813 463617222 463617162 8.600000e-10 76.8
50 TraesCS2B01G445200 chr5A 92.241 232 18 0 7471 7702 573057489 573057258 5.980000e-86 329.0
51 TraesCS2B01G445200 chr5A 77.186 469 76 26 2285 2744 576281773 576282219 2.230000e-60 244.0
52 TraesCS2B01G445200 chr5A 76.000 175 31 11 2587 2756 564411773 564411605 6.650000e-11 80.5
53 TraesCS2B01G445200 chr4B 87.456 287 33 2 7417 7703 607647705 607647422 2.150000e-85 327.0
54 TraesCS2B01G445200 chr4B 95.588 68 3 0 7350 7417 555082412 555082479 8.480000e-20 110.0
55 TraesCS2B01G445200 chr4B 91.139 79 5 2 7340 7418 175563786 175563710 1.100000e-18 106.0
56 TraesCS2B01G445200 chr7A 75.589 467 86 15 2282 2746 17930662 17930222 1.050000e-48 206.0
57 TraesCS2B01G445200 chr7A 80.460 174 33 1 2573 2746 488473806 488473978 1.810000e-26 132.0
58 TraesCS2B01G445200 chr7A 96.774 31 1 0 7750 7780 1733421 1733391 1.400000e-02 52.8
59 TraesCS2B01G445200 chr3B 87.861 173 20 1 7413 7584 682917335 682917507 1.360000e-47 202.0
60 TraesCS2B01G445200 chr3B 93.333 105 6 1 2174 2278 43682933 43682830 3.860000e-33 154.0
61 TraesCS2B01G445200 chr3B 78.889 180 26 6 2292 2465 817241932 817242105 2.360000e-20 111.0
62 TraesCS2B01G445200 chr3D 95.238 105 5 0 2174 2278 565458585 565458481 4.960000e-37 167.0
63 TraesCS2B01G445200 chr3D 91.667 108 9 0 2175 2282 14383761 14383654 4.990000e-32 150.0
64 TraesCS2B01G445200 chr3D 96.875 32 1 0 7747 7778 430381562 430381593 4.000000e-03 54.7
65 TraesCS2B01G445200 chr1D 94.286 105 6 0 2174 2278 208438780 208438884 2.310000e-35 161.0
66 TraesCS2B01G445200 chr1D 93.269 104 7 0 2175 2278 418567826 418567723 3.860000e-33 154.0
67 TraesCS2B01G445200 chr1D 97.059 68 2 0 7350 7417 305924735 305924668 1.820000e-21 115.0
68 TraesCS2B01G445200 chr7B 92.523 107 8 0 2174 2280 64122663 64122557 3.860000e-33 154.0
69 TraesCS2B01G445200 chr7B 90.000 60 5 1 7748 7807 658888602 658888544 8.600000e-10 76.8
70 TraesCS2B01G445200 chr7B 91.837 49 2 2 1372 1419 28056234 28056187 5.170000e-07 67.6
71 TraesCS2B01G445200 chr7B 85.714 63 6 3 1358 1419 285453461 285453521 6.690000e-06 63.9
72 TraesCS2B01G445200 chr7D 94.681 94 5 0 261 354 624792566 624792659 6.460000e-31 147.0
73 TraesCS2B01G445200 chr7D 95.588 68 3 0 7350 7417 264431280 264431213 8.480000e-20 110.0
74 TraesCS2B01G445200 chr7D 95.588 68 3 0 7351 7418 431926949 431926882 8.480000e-20 110.0
75 TraesCS2B01G445200 chr7D 95.588 68 3 0 7350 7417 434377295 434377228 8.480000e-20 110.0
76 TraesCS2B01G445200 chr1A 86.179 123 14 2 7871 7990 354291468 354291590 6.510000e-26 130.0
77 TraesCS2B01G445200 chr5D 93.333 75 4 1 7345 7418 442333617 442333543 8.480000e-20 110.0
78 TraesCS2B01G445200 chr4D 95.588 68 3 0 7350 7417 454959604 454959671 8.480000e-20 110.0
79 TraesCS2B01G445200 chr4D 100.000 29 0 0 2720 2748 424576818 424576790 4.000000e-03 54.7
80 TraesCS2B01G445200 chr1B 86.207 87 10 2 2661 2746 43323454 43323369 8.540000e-15 93.5
81 TraesCS2B01G445200 chr1B 91.837 49 3 1 1371 1419 344841072 344841119 5.170000e-07 67.6
82 TraesCS2B01G445200 chr3A 86.111 72 7 2 2680 2750 267068808 267068739 3.090000e-09 75.0
83 TraesCS2B01G445200 chr3A 95.556 45 1 1 1375 1419 277501045 277501002 4.000000e-08 71.3
84 TraesCS2B01G445200 chr3A 84.848 66 10 0 7748 7813 14206067 14206002 5.170000e-07 67.6
85 TraesCS2B01G445200 chr3A 97.436 39 1 0 7748 7786 172660258 172660220 5.170000e-07 67.6
86 TraesCS2B01G445200 chr6D 86.364 66 8 1 7748 7813 75758400 75758336 4.000000e-08 71.3
87 TraesCS2B01G445200 chr6D 97.436 39 0 1 1381 1419 437180642 437180605 1.860000e-06 65.8
88 TraesCS2B01G445200 chr6D 82.353 68 8 4 2681 2748 42127290 42127353 1.000000e-03 56.5
89 TraesCS2B01G445200 chr5B 91.837 49 3 1 1371 1419 183255746 183255793 5.170000e-07 67.6
90 TraesCS2B01G445200 chr4A 93.478 46 1 2 1382 1427 55431889 55431846 5.170000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G445200 chr2B 638260809 638268798 7989 True 14755.000000 14755 100.000000 1 7990 1 chr2B.!!$R5 7989
1 TraesCS2B01G445200 chr2B 637764601 637769530 4929 True 7276.000000 7276 93.340000 2279 7215 1 chr2B.!!$R3 4936
2 TraesCS2B01G445200 chr2B 637992193 638000481 8288 True 5207.000000 5845 95.245000 1423 7990 2 chr2B.!!$R12 6567
3 TraesCS2B01G445200 chr2B 638756014 638758150 2136 True 1208.000000 1208 77.396000 4006 6134 1 chr2B.!!$R8 2128
4 TraesCS2B01G445200 chr2B 643201042 643202631 1589 True 915.000000 915 77.600000 3972 5556 1 chr2B.!!$R9 1584
5 TraesCS2B01G445200 chr2B 637931758 637936944 5186 True 612.333333 1035 92.430000 402 5574 6 chr2B.!!$R11 5172
6 TraesCS2B01G445200 chr2B 637680476 637681198 722 True 590.000000 590 81.565000 5699 6448 1 chr2B.!!$R2 749
7 TraesCS2B01G445200 chr2B 637706370 637707741 1371 True 487.500000 760 87.937500 2832 7353 2 chr2B.!!$R10 4521
8 TraesCS2B01G445200 chr2B 729896859 729904350 7491 True 478.666667 1026 77.729333 966 6967 3 chr2B.!!$R13 6001
9 TraesCS2B01G445200 chr2B 637779184 637779740 556 True 309.000000 309 77.119000 3123 3710 1 chr2B.!!$R4 587
10 TraesCS2B01G445200 chr2D 536154780 536158919 4139 True 2019.000000 3157 84.463000 2855 6995 2 chr2D.!!$R2 4140
11 TraesCS2B01G445200 chr2D 536223263 536228366 5103 True 1190.333333 3073 91.309833 2329 7350 6 chr2D.!!$R3 5021
12 TraesCS2B01G445200 chr2D 536383420 536384334 914 True 532.000000 532 77.660000 4654 5574 1 chr2D.!!$R1 920
13 TraesCS2B01G445200 chr2D 599944631 599951156 6525 True 466.000000 1007 78.423333 1072 6967 3 chr2D.!!$R4 5895
14 TraesCS2B01G445200 chr2A 678966586 678970902 4316 True 1372.666667 2734 86.010667 2832 6995 3 chr2A.!!$R4 4163
15 TraesCS2B01G445200 chr2A 679263792 679265946 2154 True 1201.000000 1201 77.287000 4006 6145 1 chr2A.!!$R1 2139
16 TraesCS2B01G445200 chr2A 682611534 682613143 1609 True 939.000000 939 77.601000 3972 5574 1 chr2A.!!$R2 1602
17 TraesCS2B01G445200 chr2A 733680571 733688020 7449 True 429.666667 870 80.581333 1096 6961 3 chr2A.!!$R5 5865
18 TraesCS2B01G445200 chr2A 756952087 756952974 887 True 211.000000 211 71.814000 4381 5286 1 chr2A.!!$R3 905
19 TraesCS2B01G445200 chrUn 12441841 12443690 1849 True 560.000000 560 72.990000 3976 5815 1 chrUn.!!$R1 1839

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
227 228 0.109689 GACGGGAGAGAACTGACGTG 60.110 60.0 0.00 0.0 36.01 4.49 F
978 1110 0.115152 TTCCCTCCACTGCTCTCTGA 59.885 55.0 0.00 0.0 0.00 3.27 F
2534 2879 0.324183 CCTGTGGGCAGAGAGAGAGA 60.324 60.0 0.00 0.0 45.28 3.10 F
3148 4430 0.327591 AAGGAAGCAGCTCCTGGAAG 59.672 55.0 12.60 0.0 45.59 3.46 F
3180 4462 0.527817 CATCTTCCTACGACACCGCC 60.528 60.0 0.00 0.0 39.95 6.13 F
3744 5231 2.335316 TCTGGCCACGTTTACACTTT 57.665 45.0 0.00 0.0 0.00 2.66 F
4570 6211 2.961522 TCCGTCTTTTGCGAATGAAC 57.038 45.0 3.93 0.0 0.00 3.18 F
5584 9049 0.696501 TGAGAAGTAACCCCCTTGGC 59.303 55.0 0.00 0.0 37.83 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2085 2423 1.519455 CTCCCGCGAGCTAAAGTGG 60.519 63.158 8.23 8.47 37.74 4.00 R
2602 2961 0.240945 CGGGTGATTTTGTGCTGACC 59.759 55.000 0.00 0.00 0.00 4.02 R
3590 4963 0.119155 ACCCATCTCAGTCCCAAGGA 59.881 55.000 0.00 0.00 0.00 3.36 R
4570 6211 2.037251 ACCCGAGGAAACATCATATCCG 59.963 50.000 0.00 0.00 38.31 4.18 R
4981 6658 8.831550 GGAAATTTAAGAGCATACTCAACCTAG 58.168 37.037 0.00 0.00 46.09 3.02 R
5407 8856 3.979495 GCAGCAGCAAGATAACAATATGC 59.021 43.478 0.00 0.00 41.58 3.14 R
6289 9816 1.066908 AGTTTGTTGTGGCAACCATCG 59.933 47.619 9.17 0.00 35.28 3.84 R
7511 15043 0.179140 GCACCGTATTTGCACCATGG 60.179 55.000 11.19 11.19 39.93 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.118454 CGTTGCCGGCCTGTACAG 61.118 66.667 26.77 16.34 0.00 2.74
132 133 2.894387 GCCAGCAGCGACTCCATC 60.894 66.667 0.00 0.00 0.00 3.51
143 144 4.692129 CTCCATCGGAGTCGTTCG 57.308 61.111 1.64 0.00 44.25 3.95
144 145 2.095750 CTCCATCGGAGTCGTTCGA 58.904 57.895 1.64 0.00 44.25 3.71
145 146 0.663688 CTCCATCGGAGTCGTTCGAT 59.336 55.000 1.64 0.00 44.25 3.59
148 149 1.202256 CCATCGGAGTCGTTCGATTGA 60.202 52.381 0.00 0.00 43.19 2.57
150 151 0.179171 TCGGAGTCGTTCGATTGAGC 60.179 55.000 0.00 0.00 37.69 4.26
167 168 2.046892 CGGAGCCTGGTGTGGAAG 60.047 66.667 0.00 0.00 0.00 3.46
169 170 1.298014 GGAGCCTGGTGTGGAAGAG 59.702 63.158 0.00 0.00 0.00 2.85
170 171 1.298014 GAGCCTGGTGTGGAAGAGG 59.702 63.158 0.00 0.00 0.00 3.69
171 172 1.152030 AGCCTGGTGTGGAAGAGGA 60.152 57.895 0.00 0.00 0.00 3.71
172 173 1.197430 AGCCTGGTGTGGAAGAGGAG 61.197 60.000 0.00 0.00 0.00 3.69
173 174 1.986413 CCTGGTGTGGAAGAGGAGG 59.014 63.158 0.00 0.00 0.00 4.30
175 176 1.352083 CTGGTGTGGAAGAGGAGGAA 58.648 55.000 0.00 0.00 0.00 3.36
176 177 1.699634 CTGGTGTGGAAGAGGAGGAAA 59.300 52.381 0.00 0.00 0.00 3.13
177 178 2.307098 CTGGTGTGGAAGAGGAGGAAAT 59.693 50.000 0.00 0.00 0.00 2.17
178 179 2.716424 TGGTGTGGAAGAGGAGGAAATT 59.284 45.455 0.00 0.00 0.00 1.82
179 180 3.913799 TGGTGTGGAAGAGGAGGAAATTA 59.086 43.478 0.00 0.00 0.00 1.40
180 181 4.019321 TGGTGTGGAAGAGGAGGAAATTAG 60.019 45.833 0.00 0.00 0.00 1.73
181 182 4.518249 GTGTGGAAGAGGAGGAAATTAGG 58.482 47.826 0.00 0.00 0.00 2.69
182 183 3.054361 TGTGGAAGAGGAGGAAATTAGGC 60.054 47.826 0.00 0.00 0.00 3.93
183 184 3.054361 GTGGAAGAGGAGGAAATTAGGCA 60.054 47.826 0.00 0.00 0.00 4.75
184 185 3.200825 TGGAAGAGGAGGAAATTAGGCAG 59.799 47.826 0.00 0.00 0.00 4.85
186 187 1.139853 AGAGGAGGAAATTAGGCAGCG 59.860 52.381 0.00 0.00 0.00 5.18
188 189 1.448119 GGAGGAAATTAGGCAGCGGC 61.448 60.000 0.00 0.00 40.13 6.53
190 191 0.749454 AGGAAATTAGGCAGCGGCAG 60.749 55.000 11.88 0.00 43.71 4.85
193 194 3.721370 AATTAGGCAGCGGCAGGGG 62.721 63.158 11.88 0.00 43.71 4.79
207 208 4.791069 GGGGAGCCCGGGACACTA 62.791 72.222 29.31 0.00 36.85 2.74
208 209 3.155167 GGGAGCCCGGGACACTAG 61.155 72.222 29.31 0.00 0.00 2.57
209 210 2.043248 GGAGCCCGGGACACTAGA 60.043 66.667 29.31 0.00 0.00 2.43
210 211 2.424733 GGAGCCCGGGACACTAGAC 61.425 68.421 29.31 2.84 0.00 2.59
211 212 2.754658 AGCCCGGGACACTAGACG 60.755 66.667 29.31 0.00 0.00 4.18
214 215 2.044650 CCGGGACACTAGACGGGA 60.045 66.667 0.00 0.00 42.48 5.14
215 216 2.119655 CCGGGACACTAGACGGGAG 61.120 68.421 0.00 0.00 42.48 4.30
216 217 1.077930 CGGGACACTAGACGGGAGA 60.078 63.158 0.00 0.00 0.00 3.71
217 218 1.096386 CGGGACACTAGACGGGAGAG 61.096 65.000 0.00 0.00 0.00 3.20
218 219 0.255318 GGGACACTAGACGGGAGAGA 59.745 60.000 0.00 0.00 0.00 3.10
219 220 1.340795 GGGACACTAGACGGGAGAGAA 60.341 57.143 0.00 0.00 0.00 2.87
220 221 1.744522 GGACACTAGACGGGAGAGAAC 59.255 57.143 0.00 0.00 0.00 3.01
221 222 2.618559 GGACACTAGACGGGAGAGAACT 60.619 54.545 0.00 0.00 0.00 3.01
222 223 2.420722 GACACTAGACGGGAGAGAACTG 59.579 54.545 0.00 0.00 0.00 3.16
223 224 2.040012 ACACTAGACGGGAGAGAACTGA 59.960 50.000 0.00 0.00 0.00 3.41
224 225 2.420722 CACTAGACGGGAGAGAACTGAC 59.579 54.545 0.00 0.00 0.00 3.51
225 226 1.666700 CTAGACGGGAGAGAACTGACG 59.333 57.143 0.00 0.00 0.00 4.35
226 227 0.250814 AGACGGGAGAGAACTGACGT 60.251 55.000 0.00 0.00 37.63 4.34
227 228 0.109689 GACGGGAGAGAACTGACGTG 60.110 60.000 0.00 0.00 36.01 4.49
228 229 1.444553 CGGGAGAGAACTGACGTGC 60.445 63.158 0.00 0.00 0.00 5.34
229 230 1.444553 GGGAGAGAACTGACGTGCG 60.445 63.158 0.00 0.00 0.00 5.34
230 231 2.089349 GGAGAGAACTGACGTGCGC 61.089 63.158 0.00 0.00 0.00 6.09
231 232 2.429236 AGAGAACTGACGTGCGCG 60.429 61.111 19.78 19.78 44.93 6.86
232 233 4.122515 GAGAACTGACGTGCGCGC 62.123 66.667 27.26 27.26 42.83 6.86
233 234 4.647615 AGAACTGACGTGCGCGCT 62.648 61.111 33.29 12.78 42.83 5.92
234 235 3.702555 GAACTGACGTGCGCGCTT 61.703 61.111 33.29 16.39 42.83 4.68
235 236 3.223435 GAACTGACGTGCGCGCTTT 62.223 57.895 33.29 16.28 42.83 3.51
236 237 3.223435 AACTGACGTGCGCGCTTTC 62.223 57.895 33.29 23.85 42.83 2.62
237 238 3.701530 CTGACGTGCGCGCTTTCA 61.702 61.111 33.29 26.80 42.83 2.69
238 239 3.620187 CTGACGTGCGCGCTTTCAG 62.620 63.158 33.29 30.87 42.83 3.02
239 240 3.702555 GACGTGCGCGCTTTCAGT 61.703 61.111 33.29 22.61 42.83 3.41
240 241 2.355363 ACGTGCGCGCTTTCAGTA 60.355 55.556 33.29 6.82 42.83 2.74
241 242 1.683790 GACGTGCGCGCTTTCAGTAT 61.684 55.000 33.29 8.73 42.83 2.12
242 243 1.289109 ACGTGCGCGCTTTCAGTATT 61.289 50.000 33.29 2.94 42.83 1.89
243 244 0.179225 CGTGCGCGCTTTCAGTATTT 60.179 50.000 33.29 0.00 0.00 1.40
244 245 1.059979 CGTGCGCGCTTTCAGTATTTA 59.940 47.619 33.29 3.51 0.00 1.40
245 246 2.285602 CGTGCGCGCTTTCAGTATTTAT 60.286 45.455 33.29 0.00 0.00 1.40
246 247 3.060807 CGTGCGCGCTTTCAGTATTTATA 60.061 43.478 33.29 2.73 0.00 0.98
247 248 4.446234 GTGCGCGCTTTCAGTATTTATAG 58.554 43.478 33.29 0.00 0.00 1.31
248 249 4.025979 GTGCGCGCTTTCAGTATTTATAGT 60.026 41.667 33.29 0.00 0.00 2.12
249 250 5.174398 GTGCGCGCTTTCAGTATTTATAGTA 59.826 40.000 33.29 1.08 0.00 1.82
250 251 5.401376 TGCGCGCTTTCAGTATTTATAGTAG 59.599 40.000 33.29 0.00 0.00 2.57
251 252 5.401674 GCGCGCTTTCAGTATTTATAGTAGT 59.598 40.000 26.67 0.00 0.00 2.73
252 253 6.613745 GCGCGCTTTCAGTATTTATAGTAGTG 60.614 42.308 26.67 0.00 0.00 2.74
253 254 6.635641 CGCGCTTTCAGTATTTATAGTAGTGA 59.364 38.462 5.56 2.34 31.47 3.41
254 255 7.357368 CGCGCTTTCAGTATTTATAGTAGTGAC 60.357 40.741 5.56 0.00 32.71 3.67
255 256 7.434307 GCGCTTTCAGTATTTATAGTAGTGACA 59.566 37.037 0.00 0.34 32.71 3.58
256 257 8.959058 CGCTTTCAGTATTTATAGTAGTGACAG 58.041 37.037 10.75 10.75 34.61 3.51
257 258 9.250624 GCTTTCAGTATTTATAGTAGTGACAGG 57.749 37.037 14.05 6.84 33.21 4.00
258 259 9.751542 CTTTCAGTATTTATAGTAGTGACAGGG 57.248 37.037 4.94 0.00 32.71 4.45
259 260 8.834004 TTCAGTATTTATAGTAGTGACAGGGT 57.166 34.615 4.94 0.00 32.71 4.34
260 261 8.234136 TCAGTATTTATAGTAGTGACAGGGTG 57.766 38.462 0.00 0.00 29.06 4.61
261 262 8.057011 TCAGTATTTATAGTAGTGACAGGGTGA 58.943 37.037 0.00 0.00 29.06 4.02
262 263 8.692710 CAGTATTTATAGTAGTGACAGGGTGAA 58.307 37.037 0.00 0.00 0.00 3.18
263 264 9.435570 AGTATTTATAGTAGTGACAGGGTGAAT 57.564 33.333 0.00 0.00 0.00 2.57
270 271 7.490657 AGTAGTGACAGGGTGAATATTAACA 57.509 36.000 5.29 0.00 0.00 2.41
271 272 7.913789 AGTAGTGACAGGGTGAATATTAACAA 58.086 34.615 5.29 0.00 0.00 2.83
272 273 8.041323 AGTAGTGACAGGGTGAATATTAACAAG 58.959 37.037 5.29 0.00 0.00 3.16
273 274 7.016153 AGTGACAGGGTGAATATTAACAAGA 57.984 36.000 5.29 0.00 0.00 3.02
274 275 7.106239 AGTGACAGGGTGAATATTAACAAGAG 58.894 38.462 5.29 0.00 0.00 2.85
275 276 6.879458 GTGACAGGGTGAATATTAACAAGAGT 59.121 38.462 5.29 0.00 0.00 3.24
276 277 6.878923 TGACAGGGTGAATATTAACAAGAGTG 59.121 38.462 5.29 0.00 0.00 3.51
277 278 6.180472 ACAGGGTGAATATTAACAAGAGTGG 58.820 40.000 5.29 0.00 0.00 4.00
278 279 6.012858 ACAGGGTGAATATTAACAAGAGTGGA 60.013 38.462 5.29 0.00 0.00 4.02
279 280 6.316390 CAGGGTGAATATTAACAAGAGTGGAC 59.684 42.308 5.29 0.00 0.00 4.02
280 281 5.293569 GGGTGAATATTAACAAGAGTGGACG 59.706 44.000 5.29 0.00 0.00 4.79
281 282 5.293569 GGTGAATATTAACAAGAGTGGACGG 59.706 44.000 5.29 0.00 0.00 4.79
282 283 5.293569 GTGAATATTAACAAGAGTGGACGGG 59.706 44.000 0.00 0.00 0.00 5.28
283 284 2.109425 ATTAACAAGAGTGGACGGGC 57.891 50.000 0.00 0.00 0.00 6.13
284 285 1.053424 TTAACAAGAGTGGACGGGCT 58.947 50.000 0.00 0.00 0.00 5.19
285 286 0.606604 TAACAAGAGTGGACGGGCTC 59.393 55.000 0.00 0.00 0.00 4.70
286 287 2.125912 CAAGAGTGGACGGGCTCG 60.126 66.667 3.27 3.27 43.02 5.03
287 288 4.070552 AAGAGTGGACGGGCTCGC 62.071 66.667 5.51 0.00 40.63 5.03
297 298 3.785859 GGGCTCGCCTGGTCATGA 61.786 66.667 8.00 0.00 36.10 3.07
298 299 2.268920 GGCTCGCCTGGTCATGAA 59.731 61.111 0.00 0.00 0.00 2.57
299 300 1.377202 GGCTCGCCTGGTCATGAAA 60.377 57.895 0.00 0.00 0.00 2.69
300 301 0.749454 GGCTCGCCTGGTCATGAAAT 60.749 55.000 0.00 0.00 0.00 2.17
301 302 0.659957 GCTCGCCTGGTCATGAAATC 59.340 55.000 0.00 0.00 0.00 2.17
302 303 0.933097 CTCGCCTGGTCATGAAATCG 59.067 55.000 0.00 0.00 0.00 3.34
303 304 1.089481 TCGCCTGGTCATGAAATCGC 61.089 55.000 0.00 0.00 0.00 4.58
304 305 1.353103 GCCTGGTCATGAAATCGCG 59.647 57.895 0.00 0.00 0.00 5.87
305 306 1.089481 GCCTGGTCATGAAATCGCGA 61.089 55.000 13.09 13.09 0.00 5.87
306 307 0.933097 CCTGGTCATGAAATCGCGAG 59.067 55.000 16.66 0.00 0.00 5.03
307 308 0.933097 CTGGTCATGAAATCGCGAGG 59.067 55.000 16.66 0.00 0.00 4.63
308 309 1.089481 TGGTCATGAAATCGCGAGGC 61.089 55.000 16.66 6.83 0.00 4.70
333 334 3.986277 CAATTGCCTTGGGATATGAAGC 58.014 45.455 0.00 0.00 0.00 3.86
334 335 2.071778 TTGCCTTGGGATATGAAGCC 57.928 50.000 0.00 0.00 0.00 4.35
341 342 3.336122 GGATATGAAGCCCAGCAGG 57.664 57.895 0.00 0.00 39.47 4.85
342 343 0.475906 GGATATGAAGCCCAGCAGGT 59.524 55.000 0.00 0.00 38.26 4.00
343 344 1.699634 GGATATGAAGCCCAGCAGGTA 59.300 52.381 0.00 0.00 38.26 3.08
344 345 2.307098 GGATATGAAGCCCAGCAGGTAT 59.693 50.000 0.00 0.00 38.26 2.73
345 346 3.245052 GGATATGAAGCCCAGCAGGTATT 60.245 47.826 0.00 0.00 38.26 1.89
346 347 2.062971 ATGAAGCCCAGCAGGTATTG 57.937 50.000 0.00 0.00 38.26 1.90
347 348 0.698238 TGAAGCCCAGCAGGTATTGT 59.302 50.000 0.00 0.00 38.26 2.71
348 349 1.098050 GAAGCCCAGCAGGTATTGTG 58.902 55.000 0.00 0.00 38.26 3.33
349 350 0.323725 AAGCCCAGCAGGTATTGTGG 60.324 55.000 0.00 0.00 38.26 4.17
350 351 1.754234 GCCCAGCAGGTATTGTGGG 60.754 63.158 1.61 1.61 44.44 4.61
351 352 1.076777 CCCAGCAGGTATTGTGGGG 60.077 63.158 0.00 0.00 41.05 4.96
352 353 1.076777 CCAGCAGGTATTGTGGGGG 60.077 63.158 0.00 0.00 0.00 5.40
369 370 3.900966 GGGGGAGTACAATACTTCGTT 57.099 47.619 0.00 0.00 39.59 3.85
370 371 3.528532 GGGGGAGTACAATACTTCGTTG 58.471 50.000 0.00 0.00 39.59 4.10
371 372 3.528532 GGGGAGTACAATACTTCGTTGG 58.471 50.000 0.00 0.00 39.59 3.77
372 373 2.934553 GGGAGTACAATACTTCGTTGGC 59.065 50.000 0.00 0.00 39.59 4.52
373 374 3.592059 GGAGTACAATACTTCGTTGGCA 58.408 45.455 0.00 0.00 39.59 4.92
374 375 3.998341 GGAGTACAATACTTCGTTGGCAA 59.002 43.478 0.00 0.00 39.59 4.52
375 376 4.453136 GGAGTACAATACTTCGTTGGCAAA 59.547 41.667 0.00 0.00 39.59 3.68
376 377 5.049267 GGAGTACAATACTTCGTTGGCAAAA 60.049 40.000 0.00 0.00 39.59 2.44
377 378 6.380095 AGTACAATACTTCGTTGGCAAAAA 57.620 33.333 0.00 0.00 34.86 1.94
395 396 4.531659 AAAAAGAATACGACGGCATAGC 57.468 40.909 0.00 0.00 0.00 2.97
396 397 2.150397 AAGAATACGACGGCATAGCC 57.850 50.000 0.00 0.00 46.75 3.93
417 418 2.425312 CAGAGAACACGTGAGGAGCTAT 59.575 50.000 25.01 5.93 0.00 2.97
440 441 4.402474 TGGTGAATGATATGTCGTCTCACT 59.598 41.667 17.69 0.00 34.89 3.41
475 476 2.961768 GGCCGGGTCAATGTGTTG 59.038 61.111 2.18 0.00 36.65 3.33
525 526 3.963129 TGGACCTGGAATTGTGTTATCC 58.037 45.455 0.00 0.00 0.00 2.59
580 581 2.434336 TGAGGTGCTAAGTGTGTTGACT 59.566 45.455 0.00 0.00 0.00 3.41
618 619 3.954904 AGACTAGAAAGCTCGGAGCAATA 59.045 43.478 29.88 15.59 45.56 1.90
619 620 4.402793 AGACTAGAAAGCTCGGAGCAATAA 59.597 41.667 29.88 11.44 45.56 1.40
620 621 5.069781 AGACTAGAAAGCTCGGAGCAATAAT 59.930 40.000 29.88 14.67 45.56 1.28
630 631 5.938125 GCTCGGAGCAATAATTAAGGGAATA 59.062 40.000 24.42 0.00 41.89 1.75
664 665 2.009042 GCAAGTGCCAGCAGTACTAGG 61.009 57.143 0.00 0.00 41.05 3.02
690 691 2.457970 GCTACAGATCGGGTTTCGTAC 58.542 52.381 0.00 0.00 40.32 3.67
691 692 2.159338 GCTACAGATCGGGTTTCGTACA 60.159 50.000 0.00 0.00 40.32 2.90
692 693 3.674138 GCTACAGATCGGGTTTCGTACAA 60.674 47.826 0.00 0.00 40.32 2.41
693 694 2.955614 ACAGATCGGGTTTCGTACAAG 58.044 47.619 0.00 0.00 40.32 3.16
694 695 1.659098 CAGATCGGGTTTCGTACAAGC 59.341 52.381 0.00 0.00 40.32 4.01
695 696 1.004595 GATCGGGTTTCGTACAAGCC 58.995 55.000 4.48 4.48 40.40 4.35
697 698 3.569902 GGGTTTCGTACAAGCCGG 58.430 61.111 0.00 0.00 34.68 6.13
698 699 2.683859 GGGTTTCGTACAAGCCGGC 61.684 63.158 21.89 21.89 34.68 6.13
699 700 2.472934 GTTTCGTACAAGCCGGCG 59.527 61.111 23.20 10.77 0.00 6.46
700 701 2.739287 TTTCGTACAAGCCGGCGG 60.739 61.111 24.35 24.35 0.00 6.13
710 711 3.509659 GCCGGCGGCTATTTTCTT 58.490 55.556 41.44 0.00 46.69 2.52
711 712 1.355563 GCCGGCGGCTATTTTCTTC 59.644 57.895 41.44 10.56 46.69 2.87
712 713 1.095807 GCCGGCGGCTATTTTCTTCT 61.096 55.000 41.44 0.00 46.69 2.85
713 714 1.379527 CCGGCGGCTATTTTCTTCTT 58.620 50.000 15.42 0.00 0.00 2.52
714 715 2.557317 CCGGCGGCTATTTTCTTCTTA 58.443 47.619 15.42 0.00 0.00 2.10
715 716 3.139077 CCGGCGGCTATTTTCTTCTTAT 58.861 45.455 15.42 0.00 0.00 1.73
716 717 3.186613 CCGGCGGCTATTTTCTTCTTATC 59.813 47.826 15.42 0.00 0.00 1.75
717 718 4.058817 CGGCGGCTATTTTCTTCTTATCT 58.941 43.478 7.61 0.00 0.00 1.98
718 719 4.084328 CGGCGGCTATTTTCTTCTTATCTG 60.084 45.833 7.61 0.00 0.00 2.90
719 720 5.057149 GGCGGCTATTTTCTTCTTATCTGA 58.943 41.667 0.00 0.00 0.00 3.27
720 721 5.050023 GGCGGCTATTTTCTTCTTATCTGAC 60.050 44.000 0.00 0.00 0.00 3.51
721 722 5.755861 GCGGCTATTTTCTTCTTATCTGACT 59.244 40.000 0.00 0.00 0.00 3.41
722 723 6.292596 GCGGCTATTTTCTTCTTATCTGACTG 60.293 42.308 0.00 0.00 0.00 3.51
723 724 6.758886 CGGCTATTTTCTTCTTATCTGACTGT 59.241 38.462 0.00 0.00 0.00 3.55
724 725 7.921214 CGGCTATTTTCTTCTTATCTGACTGTA 59.079 37.037 0.00 0.00 0.00 2.74
725 726 9.601217 GGCTATTTTCTTCTTATCTGACTGTAA 57.399 33.333 0.00 0.00 0.00 2.41
729 730 8.539770 TTTTCTTCTTATCTGACTGTAAGCTG 57.460 34.615 0.00 0.00 37.60 4.24
730 731 5.655488 TCTTCTTATCTGACTGTAAGCTGC 58.345 41.667 0.00 0.00 37.60 5.25
731 732 5.420421 TCTTCTTATCTGACTGTAAGCTGCT 59.580 40.000 0.00 0.00 37.60 4.24
732 733 5.003692 TCTTATCTGACTGTAAGCTGCTG 57.996 43.478 1.35 0.00 37.60 4.41
733 734 2.021355 ATCTGACTGTAAGCTGCTGC 57.979 50.000 1.35 7.62 37.60 5.25
734 735 0.389037 TCTGACTGTAAGCTGCTGCG 60.389 55.000 1.35 0.00 45.42 5.18
735 736 0.668706 CTGACTGTAAGCTGCTGCGT 60.669 55.000 1.35 9.65 45.42 5.24
736 737 0.249868 TGACTGTAAGCTGCTGCGTT 60.250 50.000 9.54 7.32 45.42 4.84
737 738 0.164647 GACTGTAAGCTGCTGCGTTG 59.835 55.000 9.54 3.77 45.42 4.10
738 739 0.249868 ACTGTAAGCTGCTGCGTTGA 60.250 50.000 9.54 0.00 45.42 3.18
739 740 0.164647 CTGTAAGCTGCTGCGTTGAC 59.835 55.000 9.54 3.58 45.42 3.18
740 741 1.227999 TGTAAGCTGCTGCGTTGACC 61.228 55.000 9.54 0.00 45.42 4.02
741 742 1.671054 TAAGCTGCTGCGTTGACCC 60.671 57.895 9.54 0.00 45.42 4.46
744 745 4.680237 CTGCTGCGTTGACCCGGA 62.680 66.667 0.73 0.00 0.00 5.14
745 746 4.243008 TGCTGCGTTGACCCGGAA 62.243 61.111 0.73 0.00 0.00 4.30
746 747 2.975799 GCTGCGTTGACCCGGAAA 60.976 61.111 0.73 0.00 0.00 3.13
747 748 2.966309 GCTGCGTTGACCCGGAAAG 61.966 63.158 0.73 0.00 0.00 2.62
748 749 2.281208 TGCGTTGACCCGGAAAGG 60.281 61.111 0.73 1.13 40.63 3.11
771 772 2.098117 CCAGGTCGATGCTTCAATTTCC 59.902 50.000 0.08 0.00 0.00 3.13
827 828 3.795623 AAAATCTGCATGCATCAGGTC 57.204 42.857 22.97 0.00 32.63 3.85
830 831 0.466963 TCTGCATGCATCAGGTCGAT 59.533 50.000 22.97 0.00 33.27 3.59
836 837 3.721035 CATGCATCAGGTCGATACTTGA 58.279 45.455 0.00 0.00 44.77 3.02
864 865 2.887360 GCACCAGCAAATCCGCAT 59.113 55.556 0.00 0.00 41.58 4.73
892 893 6.588756 CAGGCAGTTCGAAATACAGTACTTAA 59.411 38.462 0.00 0.00 0.00 1.85
927 1058 3.243873 GCATGCCATGTCTAGCACTAGTA 60.244 47.826 6.36 0.00 42.84 1.82
978 1110 0.115152 TTCCCTCCACTGCTCTCTGA 59.885 55.000 0.00 0.00 0.00 3.27
1253 1410 3.823330 GAGGACGCGGACGATGGT 61.823 66.667 12.47 0.00 43.93 3.55
1286 1443 6.485648 GCTTTAGGTAAGAAACTCTGGTTTGA 59.514 38.462 0.00 0.00 44.58 2.69
1334 1491 2.600769 AGTGACCCGTCGCTCCTT 60.601 61.111 5.09 0.00 46.47 3.36
1389 1546 9.609950 GTGACTAATTTACATCCGTATCTACTC 57.390 37.037 0.00 0.00 0.00 2.59
1390 1547 8.790718 TGACTAATTTACATCCGTATCTACTCC 58.209 37.037 0.00 0.00 0.00 3.85
1391 1548 8.120140 ACTAATTTACATCCGTATCTACTCCC 57.880 38.462 0.00 0.00 0.00 4.30
1394 1551 3.157750 ACATCCGTATCTACTCCCTCC 57.842 52.381 0.00 0.00 0.00 4.30
1395 1552 2.085320 CATCCGTATCTACTCCCTCCG 58.915 57.143 0.00 0.00 0.00 4.63
1399 1556 3.136443 TCCGTATCTACTCCCTCCGTAAA 59.864 47.826 0.00 0.00 0.00 2.01
1400 1557 3.251972 CCGTATCTACTCCCTCCGTAAAC 59.748 52.174 0.00 0.00 0.00 2.01
1404 1561 6.429385 CGTATCTACTCCCTCCGTAAACTAAT 59.571 42.308 0.00 0.00 0.00 1.73
1409 1566 9.512588 TCTACTCCCTCCGTAAACTAATATAAG 57.487 37.037 0.00 0.00 0.00 1.73
1410 1567 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
1411 1568 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
1412 1569 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
1413 1570 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
1418 1575 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
1436 1612 9.086758 AGCGTTTAGGGAGTACTTGTATATAAT 57.913 33.333 0.00 0.00 0.00 1.28
1943 2247 9.569122 TTTTTACTTTTCATACTAGGCAAGACT 57.431 29.630 0.00 0.00 0.00 3.24
2085 2423 0.389166 CAATCTATCTCGGAGGGCGC 60.389 60.000 0.00 0.00 0.00 6.53
2127 2465 5.296283 GCATATGCTCTCTGAATGAACAGTT 59.704 40.000 20.64 0.00 37.34 3.16
2170 2508 8.782533 AACAAAATTCTAAAAAGTGTAGCGAG 57.217 30.769 0.00 0.00 0.00 5.03
2171 2509 7.927048 ACAAAATTCTAAAAAGTGTAGCGAGT 58.073 30.769 0.00 0.00 0.00 4.18
2191 2529 3.052414 AGTTGGGACTAAAGGTTTTGGGT 60.052 43.478 0.00 0.00 33.32 4.51
2201 2539 9.332719 GACTAAAGGTTTTGGGTTTTAGTCCCG 62.333 44.444 18.34 0.00 46.90 5.14
2245 2583 1.915983 GGGACTAAAGGCCCTCTGG 59.084 63.158 14.19 0.00 41.31 3.86
2254 2592 4.097361 GCCCTCTGGAACCGGGAC 62.097 72.222 6.32 0.00 40.55 4.46
2260 2599 2.176889 CTCTGGAACCGGGACTAAAGA 58.823 52.381 6.32 0.00 0.00 2.52
2273 2612 4.020751 GGGACTAAAGACCCGTTTTCTACT 60.021 45.833 1.70 0.00 39.99 2.57
2275 2614 6.328714 GGACTAAAGACCCGTTTTCTACTAG 58.671 44.000 0.00 0.00 0.00 2.57
2347 2686 1.238439 GCTTGGCTAGCTTCACACAA 58.762 50.000 15.72 8.10 46.77 3.33
2359 2698 2.278026 TCACACAACAGGATCGATCG 57.722 50.000 18.81 9.36 0.00 3.69
2413 2757 3.751698 GCTGTTTCAATCGGAGTACCTTT 59.248 43.478 0.00 0.00 0.00 3.11
2534 2879 0.324183 CCTGTGGGCAGAGAGAGAGA 60.324 60.000 0.00 0.00 45.28 3.10
2538 2883 1.064758 GTGGGCAGAGAGAGAGAGAGA 60.065 57.143 0.00 0.00 0.00 3.10
2542 2887 2.435805 GGCAGAGAGAGAGAGAGAGAGA 59.564 54.545 0.00 0.00 0.00 3.10
2546 2891 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
2550 2895 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2552 2897 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2560 2905 6.142498 AGAGAGAGAGAGAGAGAGAGAGAAT 58.858 44.000 0.00 0.00 0.00 2.40
2602 2961 2.616376 TCAACGGTCAAAACCATGTCAG 59.384 45.455 0.00 0.00 46.86 3.51
2628 2987 2.801342 GCACAAAATCACCCGAAGCAAA 60.801 45.455 0.00 0.00 0.00 3.68
2637 2996 1.524008 CCCGAAGCAAACCAAGGGAC 61.524 60.000 0.00 0.00 41.26 4.46
2696 3055 4.431416 TTGCTGGTTTTAGAGTTGAGGA 57.569 40.909 0.00 0.00 0.00 3.71
2714 3073 4.841813 TGAGGAACCATTTGTAGACTACCA 59.158 41.667 10.14 0.00 0.00 3.25
2846 3466 1.871418 TGCCTGAGAGTAGCATCCTT 58.129 50.000 0.00 0.00 0.00 3.36
3017 4154 2.162208 TGCCGAAGAAAATGCATGTCTC 59.838 45.455 12.33 4.59 0.00 3.36
3148 4430 0.327591 AAGGAAGCAGCTCCTGGAAG 59.672 55.000 12.60 0.00 45.59 3.46
3180 4462 0.527817 CATCTTCCTACGACACCGCC 60.528 60.000 0.00 0.00 39.95 6.13
3733 5220 4.134563 TGTACTCTTTCTTTTCTGGCCAC 58.865 43.478 0.00 0.00 0.00 5.01
3744 5231 2.335316 TCTGGCCACGTTTACACTTT 57.665 45.000 0.00 0.00 0.00 2.66
3800 5331 6.122964 GGGACTGGCTATTTTTCTCTTGTAT 58.877 40.000 0.00 0.00 0.00 2.29
3866 5416 8.924511 ATTTTCTAAGAACCATGACTTGAAGA 57.075 30.769 0.00 0.00 0.00 2.87
4178 5742 4.846779 TTTTGATGACAAAGCCCTACAC 57.153 40.909 0.00 0.00 44.97 2.90
4243 5811 5.047235 GGTCTAGCTACCTTTCTTTGTGAGA 60.047 44.000 0.00 0.00 36.53 3.27
4259 5827 8.345565 TCTTTGTGAGAAATTTGTAAGCTCTTC 58.654 33.333 0.00 0.00 0.00 2.87
4262 5830 6.205464 TGTGAGAAATTTGTAAGCTCTTCAGG 59.795 38.462 0.00 0.00 0.00 3.86
4351 5920 7.611467 ACATTGTCAGCTTTCATTGGTAGATTA 59.389 33.333 11.74 0.00 0.00 1.75
4360 5929 9.508567 GCTTTCATTGGTAGATTATCTTGAAAC 57.491 33.333 12.35 8.10 30.98 2.78
4369 5938 5.368989 AGATTATCTTGAAACCATCGGGAC 58.631 41.667 0.00 0.00 38.05 4.46
4570 6211 2.961522 TCCGTCTTTTGCGAATGAAC 57.038 45.000 3.93 0.00 0.00 3.18
5308 8735 6.207691 TGTAAAATTTATGCTCTCTTGCCC 57.792 37.500 0.00 0.00 0.00 5.36
5584 9049 0.696501 TGAGAAGTAACCCCCTTGGC 59.303 55.000 0.00 0.00 37.83 4.52
5753 9228 3.580458 ACTACAGTCAATCAGCTTGGAGT 59.420 43.478 0.00 0.00 35.43 3.85
5887 9404 0.983467 TCCATCTGCAGTGGCTACAA 59.017 50.000 22.98 9.06 41.91 2.41
6044 9561 2.354704 CCAAAGCTCTCGGGATGTGTTA 60.355 50.000 0.00 0.00 0.00 2.41
6064 9581 9.166173 TGTGTTATCCAAGATCAAGAATACAAG 57.834 33.333 0.00 0.00 0.00 3.16
6157 9675 6.091849 GGTTCCTTTTATCCTCAACTTCGTAC 59.908 42.308 0.00 0.00 0.00 3.67
6301 10530 1.981256 AATATCCCGATGGTTGCCAC 58.019 50.000 0.00 0.00 35.80 5.01
6451 11522 6.593770 CACACATCTAAGTGCTTGTATGGTAA 59.406 38.462 10.77 0.00 43.23 2.85
6637 14058 8.164733 TGTAATTTGGTACCCTGACAATCTTTA 58.835 33.333 10.07 0.00 0.00 1.85
7024 14449 3.651803 TTGCCTTGTTTTAATGGACCG 57.348 42.857 0.00 0.00 0.00 4.79
7118 14544 8.318412 TGTATGTGGTACATCAGAAACAACTAT 58.682 33.333 0.00 0.00 44.52 2.12
7250 14781 5.125257 TCACGTAAATTCCTCGTATACACCA 59.875 40.000 3.32 0.00 36.05 4.17
7252 14783 4.438797 CGTAAATTCCTCGTATACACCACG 59.561 45.833 3.32 0.00 40.72 4.94
7259 14790 1.402968 TCGTATACACCACGAAGCTCC 59.597 52.381 3.32 0.00 44.79 4.70
7267 14798 0.872021 CCACGAAGCTCCGTATCTGC 60.872 60.000 0.00 0.00 41.29 4.26
7268 14799 0.872021 CACGAAGCTCCGTATCTGCC 60.872 60.000 0.00 0.00 41.29 4.85
7304 14835 5.369833 TCTTTTCTTGTGTAAATCCCGTGA 58.630 37.500 0.00 0.00 0.00 4.35
7306 14837 3.755112 TCTTGTGTAAATCCCGTGACA 57.245 42.857 0.00 0.00 0.00 3.58
7360 14891 3.620488 TGTTGATGCAAATACTCCCTCC 58.380 45.455 0.00 0.00 0.00 4.30
7378 14909 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
7411 14942 9.851686 TGGATGCATCTAGACATATTTTAGTTT 57.148 29.630 25.28 0.00 0.00 2.66
7511 15043 6.613755 TGAAACTAGTGCTTAAACTTGTCC 57.386 37.500 0.00 0.00 35.50 4.02
7540 15072 0.974010 AATACGGTGCCTCCTTCCGA 60.974 55.000 9.75 0.00 46.05 4.55
7549 15081 1.369625 CCTCCTTCCGAATCCAAACG 58.630 55.000 0.00 0.00 0.00 3.60
7559 15091 2.669434 CGAATCCAAACGTACGTCCAAT 59.331 45.455 23.05 10.23 0.00 3.16
7630 15162 3.314357 GCGGGAAAATGTTGGGTATACTC 59.686 47.826 2.25 0.00 0.00 2.59
7632 15164 3.881089 GGGAAAATGTTGGGTATACTCCG 59.119 47.826 0.00 0.00 0.00 4.63
7657 15189 5.683743 CGCACGAGGATTCTTTTTACAAAAA 59.316 36.000 0.00 0.36 36.53 1.94
7658 15190 6.362283 CGCACGAGGATTCTTTTTACAAAAAT 59.638 34.615 0.62 0.00 37.27 1.82
7730 15262 1.811558 ATGAAGCCCCGATTCATCGTG 60.812 52.381 8.34 0.00 43.80 4.35
7807 15339 4.175787 AGACGTCTTCATTGACAGGTAC 57.824 45.455 13.58 0.00 36.82 3.34
7823 15355 0.604243 GTACAACCATGCACACGGGA 60.604 55.000 0.00 0.00 0.00 5.14
7834 15366 0.034756 CACACGGGACATCCACAGAA 59.965 55.000 0.00 0.00 37.91 3.02
7858 15390 0.396811 ACACTCTACCCCTTGTGCAC 59.603 55.000 10.75 10.75 34.14 4.57
7870 15402 3.050275 GTGCACGGGTCAAGAGGC 61.050 66.667 0.00 0.00 0.00 4.70
7871 15403 4.329545 TGCACGGGTCAAGAGGCC 62.330 66.667 0.00 0.00 0.00 5.19
7888 15420 4.769063 CCGTGCGCATGGGGTGTA 62.769 66.667 36.30 0.00 33.82 2.90
7891 15423 1.748879 GTGCGCATGGGGTGTACAT 60.749 57.895 15.91 0.00 41.57 2.29
7927 15459 4.371975 GTGCTCACGGGTTAAGCA 57.628 55.556 7.03 0.00 43.40 3.91
7952 15484 5.284582 AGAGGATACCATGAGGACTTCTTT 58.715 41.667 0.00 0.00 38.69 2.52
7955 15487 5.488919 AGGATACCATGAGGACTTCTTTGAA 59.511 40.000 0.00 0.00 38.69 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.431725 GCTGTACAGGCCGGCAAC 61.432 66.667 30.85 19.92 34.28 4.17
84 85 3.941657 GAGCAGTGGAGGCACGGTC 62.942 68.421 0.00 0.00 0.00 4.79
85 86 4.008933 GAGCAGTGGAGGCACGGT 62.009 66.667 0.00 0.00 0.00 4.83
115 116 2.894387 GATGGAGTCGCTGCTGGC 60.894 66.667 0.00 0.00 37.64 4.85
128 129 1.200483 CAATCGAACGACTCCGATGG 58.800 55.000 0.00 0.00 43.72 3.51
130 131 1.534175 GCTCAATCGAACGACTCCGAT 60.534 52.381 0.00 0.00 46.08 4.18
131 132 0.179171 GCTCAATCGAACGACTCCGA 60.179 55.000 0.00 0.00 39.50 4.55
132 133 1.464429 CGCTCAATCGAACGACTCCG 61.464 60.000 0.00 0.00 42.50 4.63
134 135 0.179171 TCCGCTCAATCGAACGACTC 60.179 55.000 0.00 0.00 32.39 3.36
135 136 0.179161 CTCCGCTCAATCGAACGACT 60.179 55.000 0.00 0.00 32.39 4.18
137 138 1.516386 GCTCCGCTCAATCGAACGA 60.516 57.895 0.00 0.00 32.39 3.85
138 139 2.517450 GGCTCCGCTCAATCGAACG 61.517 63.158 0.00 0.00 0.00 3.95
140 141 1.153568 CAGGCTCCGCTCAATCGAA 60.154 57.895 0.00 0.00 0.00 3.71
141 142 2.496341 CAGGCTCCGCTCAATCGA 59.504 61.111 0.00 0.00 0.00 3.59
142 143 2.587194 CCAGGCTCCGCTCAATCG 60.587 66.667 0.00 0.00 0.00 3.34
143 144 1.817099 CACCAGGCTCCGCTCAATC 60.817 63.158 0.00 0.00 0.00 2.67
144 145 2.270205 CACCAGGCTCCGCTCAAT 59.730 61.111 0.00 0.00 0.00 2.57
145 146 3.241530 ACACCAGGCTCCGCTCAA 61.242 61.111 0.00 0.00 0.00 3.02
150 151 2.046892 CTTCCACACCAGGCTCCG 60.047 66.667 0.00 0.00 0.00 4.63
151 152 1.298014 CTCTTCCACACCAGGCTCC 59.702 63.158 0.00 0.00 0.00 4.70
153 154 1.152030 TCCTCTTCCACACCAGGCT 60.152 57.895 0.00 0.00 0.00 4.58
154 155 1.298014 CTCCTCTTCCACACCAGGC 59.702 63.158 0.00 0.00 0.00 4.85
156 157 1.352083 TTCCTCCTCTTCCACACCAG 58.648 55.000 0.00 0.00 0.00 4.00
157 158 1.814429 TTTCCTCCTCTTCCACACCA 58.186 50.000 0.00 0.00 0.00 4.17
158 159 3.441500 AATTTCCTCCTCTTCCACACC 57.558 47.619 0.00 0.00 0.00 4.16
159 160 4.518249 CCTAATTTCCTCCTCTTCCACAC 58.482 47.826 0.00 0.00 0.00 3.82
160 161 3.054361 GCCTAATTTCCTCCTCTTCCACA 60.054 47.826 0.00 0.00 0.00 4.17
161 162 3.054361 TGCCTAATTTCCTCCTCTTCCAC 60.054 47.826 0.00 0.00 0.00 4.02
164 165 3.210227 GCTGCCTAATTTCCTCCTCTTC 58.790 50.000 0.00 0.00 0.00 2.87
165 166 2.420687 CGCTGCCTAATTTCCTCCTCTT 60.421 50.000 0.00 0.00 0.00 2.85
166 167 1.139853 CGCTGCCTAATTTCCTCCTCT 59.860 52.381 0.00 0.00 0.00 3.69
167 168 1.587547 CGCTGCCTAATTTCCTCCTC 58.412 55.000 0.00 0.00 0.00 3.71
169 170 1.448119 GCCGCTGCCTAATTTCCTCC 61.448 60.000 0.00 0.00 0.00 4.30
170 171 0.748005 TGCCGCTGCCTAATTTCCTC 60.748 55.000 0.00 0.00 36.33 3.71
171 172 0.749454 CTGCCGCTGCCTAATTTCCT 60.749 55.000 0.00 0.00 36.33 3.36
172 173 1.728490 CCTGCCGCTGCCTAATTTCC 61.728 60.000 0.00 0.00 36.33 3.13
173 174 1.728490 CCCTGCCGCTGCCTAATTTC 61.728 60.000 0.00 0.00 36.33 2.17
175 176 2.124151 CCCTGCCGCTGCCTAATT 60.124 61.111 0.00 0.00 36.33 1.40
176 177 4.195334 CCCCTGCCGCTGCCTAAT 62.195 66.667 0.00 0.00 36.33 1.73
190 191 4.791069 TAGTGTCCCGGGCTCCCC 62.791 72.222 18.49 0.98 41.09 4.81
193 194 2.772691 CGTCTAGTGTCCCGGGCTC 61.773 68.421 18.49 12.33 0.00 4.70
194 195 2.754658 CGTCTAGTGTCCCGGGCT 60.755 66.667 18.49 10.38 0.00 5.19
197 198 2.044650 TCCCGTCTAGTGTCCCGG 60.045 66.667 0.00 0.00 40.12 5.73
198 199 1.077930 TCTCCCGTCTAGTGTCCCG 60.078 63.158 0.00 0.00 0.00 5.14
199 200 0.255318 TCTCTCCCGTCTAGTGTCCC 59.745 60.000 0.00 0.00 0.00 4.46
200 201 1.744522 GTTCTCTCCCGTCTAGTGTCC 59.255 57.143 0.00 0.00 0.00 4.02
201 202 2.420722 CAGTTCTCTCCCGTCTAGTGTC 59.579 54.545 0.00 0.00 0.00 3.67
202 203 2.040012 TCAGTTCTCTCCCGTCTAGTGT 59.960 50.000 0.00 0.00 0.00 3.55
203 204 2.420722 GTCAGTTCTCTCCCGTCTAGTG 59.579 54.545 0.00 0.00 0.00 2.74
204 205 2.713877 GTCAGTTCTCTCCCGTCTAGT 58.286 52.381 0.00 0.00 0.00 2.57
205 206 1.666700 CGTCAGTTCTCTCCCGTCTAG 59.333 57.143 0.00 0.00 0.00 2.43
207 208 0.250814 ACGTCAGTTCTCTCCCGTCT 60.251 55.000 0.00 0.00 0.00 4.18
208 209 0.109689 CACGTCAGTTCTCTCCCGTC 60.110 60.000 0.00 0.00 0.00 4.79
209 210 1.957562 CACGTCAGTTCTCTCCCGT 59.042 57.895 0.00 0.00 0.00 5.28
210 211 1.444553 GCACGTCAGTTCTCTCCCG 60.445 63.158 0.00 0.00 0.00 5.14
211 212 1.444553 CGCACGTCAGTTCTCTCCC 60.445 63.158 0.00 0.00 0.00 4.30
213 214 2.429351 CGCGCACGTCAGTTCTCTC 61.429 63.158 8.75 0.00 33.53 3.20
214 215 2.429236 CGCGCACGTCAGTTCTCT 60.429 61.111 8.75 0.00 33.53 3.10
215 216 4.122515 GCGCGCACGTCAGTTCTC 62.123 66.667 29.10 0.00 42.83 2.87
216 217 4.647615 AGCGCGCACGTCAGTTCT 62.648 61.111 35.10 4.83 42.83 3.01
217 218 3.223435 AAAGCGCGCACGTCAGTTC 62.223 57.895 35.10 0.00 42.83 3.01
218 219 3.223435 GAAAGCGCGCACGTCAGTT 62.223 57.895 35.10 14.26 42.83 3.16
219 220 3.702555 GAAAGCGCGCACGTCAGT 61.703 61.111 35.10 7.55 42.83 3.41
220 221 3.620187 CTGAAAGCGCGCACGTCAG 62.620 63.158 35.10 32.43 42.83 3.51
221 222 3.701530 CTGAAAGCGCGCACGTCA 61.702 61.111 35.10 28.37 42.83 4.35
222 223 1.683790 ATACTGAAAGCGCGCACGTC 61.684 55.000 35.10 25.44 42.83 4.34
223 224 1.289109 AATACTGAAAGCGCGCACGT 61.289 50.000 35.10 22.32 42.83 4.49
224 225 0.179225 AAATACTGAAAGCGCGCACG 60.179 50.000 35.10 17.77 44.07 5.34
225 226 2.798834 TAAATACTGAAAGCGCGCAC 57.201 45.000 35.10 23.21 37.60 5.34
226 227 4.116961 ACTATAAATACTGAAAGCGCGCA 58.883 39.130 35.10 11.86 37.60 6.09
227 228 4.710528 ACTATAAATACTGAAAGCGCGC 57.289 40.909 26.66 26.66 37.60 6.86
228 229 6.635641 TCACTACTATAAATACTGAAAGCGCG 59.364 38.462 0.00 0.00 37.60 6.86
229 230 7.434307 TGTCACTACTATAAATACTGAAAGCGC 59.566 37.037 0.00 0.00 37.60 5.92
230 231 8.851960 TGTCACTACTATAAATACTGAAAGCG 57.148 34.615 0.00 0.00 37.60 4.68
231 232 9.250624 CCTGTCACTACTATAAATACTGAAAGC 57.749 37.037 0.00 0.00 37.60 3.51
232 233 9.751542 CCCTGTCACTACTATAAATACTGAAAG 57.248 37.037 0.00 0.00 42.29 2.62
233 234 9.263446 ACCCTGTCACTACTATAAATACTGAAA 57.737 33.333 0.00 0.00 0.00 2.69
234 235 8.692710 CACCCTGTCACTACTATAAATACTGAA 58.307 37.037 0.00 0.00 0.00 3.02
235 236 8.057011 TCACCCTGTCACTACTATAAATACTGA 58.943 37.037 0.00 0.00 0.00 3.41
236 237 8.234136 TCACCCTGTCACTACTATAAATACTG 57.766 38.462 0.00 0.00 0.00 2.74
237 238 8.834004 TTCACCCTGTCACTACTATAAATACT 57.166 34.615 0.00 0.00 0.00 2.12
244 245 9.209048 TGTTAATATTCACCCTGTCACTACTAT 57.791 33.333 0.00 0.00 0.00 2.12
245 246 8.598202 TGTTAATATTCACCCTGTCACTACTA 57.402 34.615 0.00 0.00 0.00 1.82
246 247 7.490657 TGTTAATATTCACCCTGTCACTACT 57.509 36.000 0.00 0.00 0.00 2.57
247 248 8.038944 TCTTGTTAATATTCACCCTGTCACTAC 58.961 37.037 0.00 0.00 0.00 2.73
248 249 8.141298 TCTTGTTAATATTCACCCTGTCACTA 57.859 34.615 0.00 0.00 0.00 2.74
249 250 7.016153 TCTTGTTAATATTCACCCTGTCACT 57.984 36.000 0.00 0.00 0.00 3.41
250 251 6.879458 ACTCTTGTTAATATTCACCCTGTCAC 59.121 38.462 0.00 0.00 0.00 3.67
251 252 6.878923 CACTCTTGTTAATATTCACCCTGTCA 59.121 38.462 0.00 0.00 0.00 3.58
252 253 6.316390 CCACTCTTGTTAATATTCACCCTGTC 59.684 42.308 0.00 0.00 0.00 3.51
253 254 6.012858 TCCACTCTTGTTAATATTCACCCTGT 60.013 38.462 0.00 0.00 0.00 4.00
254 255 6.316390 GTCCACTCTTGTTAATATTCACCCTG 59.684 42.308 0.00 0.00 0.00 4.45
255 256 6.415573 GTCCACTCTTGTTAATATTCACCCT 58.584 40.000 0.00 0.00 0.00 4.34
256 257 5.293569 CGTCCACTCTTGTTAATATTCACCC 59.706 44.000 0.00 0.00 0.00 4.61
257 258 5.293569 CCGTCCACTCTTGTTAATATTCACC 59.706 44.000 0.00 0.00 0.00 4.02
258 259 5.293569 CCCGTCCACTCTTGTTAATATTCAC 59.706 44.000 0.00 0.00 0.00 3.18
259 260 5.424757 CCCGTCCACTCTTGTTAATATTCA 58.575 41.667 0.00 0.00 0.00 2.57
260 261 4.272748 GCCCGTCCACTCTTGTTAATATTC 59.727 45.833 0.00 0.00 0.00 1.75
261 262 4.080526 AGCCCGTCCACTCTTGTTAATATT 60.081 41.667 0.00 0.00 0.00 1.28
262 263 3.454812 AGCCCGTCCACTCTTGTTAATAT 59.545 43.478 0.00 0.00 0.00 1.28
263 264 2.835764 AGCCCGTCCACTCTTGTTAATA 59.164 45.455 0.00 0.00 0.00 0.98
264 265 1.628846 AGCCCGTCCACTCTTGTTAAT 59.371 47.619 0.00 0.00 0.00 1.40
265 266 1.001633 GAGCCCGTCCACTCTTGTTAA 59.998 52.381 0.00 0.00 0.00 2.01
266 267 0.606604 GAGCCCGTCCACTCTTGTTA 59.393 55.000 0.00 0.00 0.00 2.41
267 268 1.371558 GAGCCCGTCCACTCTTGTT 59.628 57.895 0.00 0.00 0.00 2.83
268 269 2.932234 CGAGCCCGTCCACTCTTGT 61.932 63.158 0.00 0.00 0.00 3.16
269 270 2.125912 CGAGCCCGTCCACTCTTG 60.126 66.667 0.00 0.00 0.00 3.02
270 271 4.070552 GCGAGCCCGTCCACTCTT 62.071 66.667 0.00 0.00 38.24 2.85
280 281 2.819984 TTTCATGACCAGGCGAGCCC 62.820 60.000 10.95 0.00 36.58 5.19
281 282 0.749454 ATTTCATGACCAGGCGAGCC 60.749 55.000 5.89 5.89 0.00 4.70
282 283 0.659957 GATTTCATGACCAGGCGAGC 59.340 55.000 0.00 0.00 0.00 5.03
283 284 0.933097 CGATTTCATGACCAGGCGAG 59.067 55.000 0.00 0.00 0.00 5.03
284 285 1.089481 GCGATTTCATGACCAGGCGA 61.089 55.000 0.00 0.00 0.00 5.54
285 286 1.353103 GCGATTTCATGACCAGGCG 59.647 57.895 0.00 0.00 0.00 5.52
286 287 1.089481 TCGCGATTTCATGACCAGGC 61.089 55.000 3.71 0.00 0.00 4.85
287 288 0.933097 CTCGCGATTTCATGACCAGG 59.067 55.000 10.36 0.00 0.00 4.45
288 289 0.933097 CCTCGCGATTTCATGACCAG 59.067 55.000 10.36 0.00 0.00 4.00
289 290 1.089481 GCCTCGCGATTTCATGACCA 61.089 55.000 10.36 0.00 0.00 4.02
290 291 1.643832 GCCTCGCGATTTCATGACC 59.356 57.895 10.36 0.00 0.00 4.02
312 313 3.243975 GGCTTCATATCCCAAGGCAATTG 60.244 47.826 0.00 0.00 43.10 2.32
313 314 2.967887 GGCTTCATATCCCAAGGCAATT 59.032 45.455 7.09 0.00 43.10 2.32
314 315 2.601905 GGCTTCATATCCCAAGGCAAT 58.398 47.619 7.09 0.00 43.10 3.56
315 316 1.411501 GGGCTTCATATCCCAAGGCAA 60.412 52.381 11.95 0.00 44.90 4.52
316 317 0.185901 GGGCTTCATATCCCAAGGCA 59.814 55.000 11.95 0.00 44.90 4.75
317 318 3.042481 GGGCTTCATATCCCAAGGC 57.958 57.895 0.00 0.00 42.18 4.35
322 323 0.251077 CCTGCTGGGCTTCATATCCC 60.251 60.000 0.71 0.00 42.93 3.85
323 324 0.475906 ACCTGCTGGGCTTCATATCC 59.524 55.000 14.82 0.00 39.10 2.59
324 325 3.710209 ATACCTGCTGGGCTTCATATC 57.290 47.619 14.82 0.00 39.10 1.63
325 326 3.139025 ACAATACCTGCTGGGCTTCATAT 59.861 43.478 14.82 0.00 39.10 1.78
326 327 2.509548 ACAATACCTGCTGGGCTTCATA 59.490 45.455 14.82 0.00 39.10 2.15
327 328 1.285962 ACAATACCTGCTGGGCTTCAT 59.714 47.619 14.82 0.00 39.10 2.57
328 329 0.698238 ACAATACCTGCTGGGCTTCA 59.302 50.000 14.82 0.00 39.10 3.02
329 330 1.098050 CACAATACCTGCTGGGCTTC 58.902 55.000 14.82 0.00 39.10 3.86
330 331 0.323725 CCACAATACCTGCTGGGCTT 60.324 55.000 14.82 3.97 39.10 4.35
331 332 1.304282 CCACAATACCTGCTGGGCT 59.696 57.895 14.82 0.00 39.10 5.19
332 333 1.754234 CCCACAATACCTGCTGGGC 60.754 63.158 14.82 0.00 38.63 5.36
333 334 1.076777 CCCCACAATACCTGCTGGG 60.077 63.158 14.82 5.48 42.03 4.45
334 335 1.076777 CCCCCACAATACCTGCTGG 60.077 63.158 8.29 8.29 39.83 4.85
335 336 4.664062 CCCCCACAATACCTGCTG 57.336 61.111 0.00 0.00 0.00 4.41
349 350 3.528532 CAACGAAGTATTGTACTCCCCC 58.471 50.000 0.00 0.00 45.00 5.40
350 351 3.528532 CCAACGAAGTATTGTACTCCCC 58.471 50.000 0.00 0.00 45.00 4.81
351 352 2.934553 GCCAACGAAGTATTGTACTCCC 59.065 50.000 0.00 0.00 45.00 4.30
352 353 3.592059 TGCCAACGAAGTATTGTACTCC 58.408 45.455 0.00 0.00 45.00 3.85
353 354 5.600908 TTTGCCAACGAAGTATTGTACTC 57.399 39.130 0.00 0.00 45.00 2.59
354 355 6.380095 TTTTTGCCAACGAAGTATTGTACT 57.620 33.333 0.00 0.00 45.00 2.73
374 375 3.311596 GGCTATGCCGTCGTATTCTTTTT 59.688 43.478 0.00 0.00 39.62 1.94
375 376 2.870411 GGCTATGCCGTCGTATTCTTTT 59.130 45.455 0.00 0.00 39.62 2.27
376 377 2.480845 GGCTATGCCGTCGTATTCTTT 58.519 47.619 0.00 0.00 39.62 2.52
377 378 2.150397 GGCTATGCCGTCGTATTCTT 57.850 50.000 0.00 0.00 39.62 2.52
378 379 3.888093 GGCTATGCCGTCGTATTCT 57.112 52.632 0.00 0.00 39.62 2.40
389 390 1.002366 CACGTGTTCTCTGGCTATGC 58.998 55.000 7.58 0.00 0.00 3.14
390 391 2.534298 CTCACGTGTTCTCTGGCTATG 58.466 52.381 16.51 0.00 0.00 2.23
391 392 1.478510 CCTCACGTGTTCTCTGGCTAT 59.521 52.381 16.51 0.00 0.00 2.97
392 393 0.888619 CCTCACGTGTTCTCTGGCTA 59.111 55.000 16.51 0.00 0.00 3.93
393 394 0.827925 TCCTCACGTGTTCTCTGGCT 60.828 55.000 16.51 0.00 0.00 4.75
394 395 0.389166 CTCCTCACGTGTTCTCTGGC 60.389 60.000 16.51 0.00 0.00 4.85
395 396 0.389166 GCTCCTCACGTGTTCTCTGG 60.389 60.000 16.51 9.32 0.00 3.86
396 397 0.600557 AGCTCCTCACGTGTTCTCTG 59.399 55.000 16.51 3.81 0.00 3.35
397 398 2.201921 TAGCTCCTCACGTGTTCTCT 57.798 50.000 16.51 9.87 0.00 3.10
398 399 2.480416 CCATAGCTCCTCACGTGTTCTC 60.480 54.545 16.51 2.67 0.00 2.87
399 400 1.478510 CCATAGCTCCTCACGTGTTCT 59.521 52.381 16.51 8.86 0.00 3.01
400 401 1.204941 ACCATAGCTCCTCACGTGTTC 59.795 52.381 16.51 1.59 0.00 3.18
417 418 4.402474 AGTGAGACGACATATCATTCACCA 59.598 41.667 0.00 0.00 33.10 4.17
440 441 0.030504 CCGCAGCAACATGTGTTTCA 59.969 50.000 0.00 0.00 35.83 2.69
495 496 2.203139 CCAGGTCCAACACGCACA 60.203 61.111 0.00 0.00 0.00 4.57
500 501 2.306847 ACACAATTCCAGGTCCAACAC 58.693 47.619 0.00 0.00 0.00 3.32
505 506 2.943033 CGGATAACACAATTCCAGGTCC 59.057 50.000 0.00 0.00 0.00 4.46
525 526 1.597854 TGTTTGGACTGCAGAGCCG 60.598 57.895 23.35 0.00 0.00 5.52
620 621 9.303116 TGCAAAACTCTACAAATATTCCCTTAA 57.697 29.630 0.00 0.00 0.00 1.85
630 631 4.099266 TGGCACTTGCAAAACTCTACAAAT 59.901 37.500 0.00 0.00 44.36 2.32
694 695 1.379527 AAGAAGAAAATAGCCGCCGG 58.620 50.000 0.00 0.00 0.00 6.13
695 696 4.058817 AGATAAGAAGAAAATAGCCGCCG 58.941 43.478 0.00 0.00 0.00 6.46
696 697 5.050023 GTCAGATAAGAAGAAAATAGCCGCC 60.050 44.000 0.00 0.00 0.00 6.13
697 698 5.755861 AGTCAGATAAGAAGAAAATAGCCGC 59.244 40.000 0.00 0.00 0.00 6.53
698 699 6.758886 ACAGTCAGATAAGAAGAAAATAGCCG 59.241 38.462 0.00 0.00 0.00 5.52
699 700 9.601217 TTACAGTCAGATAAGAAGAAAATAGCC 57.399 33.333 0.00 0.00 0.00 3.93
703 704 9.160496 CAGCTTACAGTCAGATAAGAAGAAAAT 57.840 33.333 0.00 0.00 31.20 1.82
704 705 7.118390 GCAGCTTACAGTCAGATAAGAAGAAAA 59.882 37.037 0.00 0.00 31.20 2.29
705 706 6.591834 GCAGCTTACAGTCAGATAAGAAGAAA 59.408 38.462 0.00 0.00 31.20 2.52
706 707 6.071108 AGCAGCTTACAGTCAGATAAGAAGAA 60.071 38.462 0.00 0.00 31.20 2.52
707 708 5.420421 AGCAGCTTACAGTCAGATAAGAAGA 59.580 40.000 0.00 0.00 31.20 2.87
708 709 5.519566 CAGCAGCTTACAGTCAGATAAGAAG 59.480 44.000 0.00 0.00 31.20 2.85
709 710 5.414360 CAGCAGCTTACAGTCAGATAAGAA 58.586 41.667 0.00 0.00 31.20 2.52
710 711 4.679106 GCAGCAGCTTACAGTCAGATAAGA 60.679 45.833 0.00 0.00 37.91 2.10
711 712 3.555139 GCAGCAGCTTACAGTCAGATAAG 59.445 47.826 0.00 0.00 37.91 1.73
712 713 3.525537 GCAGCAGCTTACAGTCAGATAA 58.474 45.455 0.00 0.00 37.91 1.75
713 714 2.480244 CGCAGCAGCTTACAGTCAGATA 60.480 50.000 0.00 0.00 39.10 1.98
714 715 1.738365 CGCAGCAGCTTACAGTCAGAT 60.738 52.381 0.00 0.00 39.10 2.90
715 716 0.389037 CGCAGCAGCTTACAGTCAGA 60.389 55.000 0.00 0.00 39.10 3.27
716 717 0.668706 ACGCAGCAGCTTACAGTCAG 60.669 55.000 0.00 0.00 39.10 3.51
717 718 0.249868 AACGCAGCAGCTTACAGTCA 60.250 50.000 0.00 0.00 39.10 3.41
718 719 0.164647 CAACGCAGCAGCTTACAGTC 59.835 55.000 0.00 0.00 39.10 3.51
719 720 0.249868 TCAACGCAGCAGCTTACAGT 60.250 50.000 0.00 0.00 39.10 3.55
720 721 0.164647 GTCAACGCAGCAGCTTACAG 59.835 55.000 0.00 0.00 39.10 2.74
721 722 1.227999 GGTCAACGCAGCAGCTTACA 61.228 55.000 0.00 0.00 39.10 2.41
722 723 1.497722 GGTCAACGCAGCAGCTTAC 59.502 57.895 0.00 0.00 39.10 2.34
723 724 1.671054 GGGTCAACGCAGCAGCTTA 60.671 57.895 0.00 0.00 39.10 3.09
724 725 2.980233 GGGTCAACGCAGCAGCTT 60.980 61.111 0.00 0.00 39.10 3.74
727 728 4.680237 TCCGGGTCAACGCAGCAG 62.680 66.667 0.00 0.00 0.00 4.24
728 729 3.758973 TTTCCGGGTCAACGCAGCA 62.759 57.895 0.00 0.00 0.00 4.41
729 730 2.966309 CTTTCCGGGTCAACGCAGC 61.966 63.158 0.00 0.00 0.00 5.25
730 731 2.325082 CCTTTCCGGGTCAACGCAG 61.325 63.158 0.00 0.00 0.00 5.18
731 732 2.281208 CCTTTCCGGGTCAACGCA 60.281 61.111 0.00 0.00 0.00 5.24
732 733 2.281276 ACCTTTCCGGGTCAACGC 60.281 61.111 0.00 0.00 33.84 4.84
740 741 1.614241 ATCGACCTGGACCTTTCCGG 61.614 60.000 0.00 0.00 46.37 5.14
741 742 0.460284 CATCGACCTGGACCTTTCCG 60.460 60.000 0.00 0.00 46.37 4.30
742 743 0.744771 GCATCGACCTGGACCTTTCC 60.745 60.000 0.00 0.00 43.19 3.13
743 744 0.250513 AGCATCGACCTGGACCTTTC 59.749 55.000 0.00 0.00 0.00 2.62
744 745 0.693049 AAGCATCGACCTGGACCTTT 59.307 50.000 0.00 0.00 0.00 3.11
745 746 0.250513 GAAGCATCGACCTGGACCTT 59.749 55.000 0.00 0.00 0.00 3.50
746 747 0.904865 TGAAGCATCGACCTGGACCT 60.905 55.000 0.00 0.00 0.00 3.85
747 748 0.036388 TTGAAGCATCGACCTGGACC 60.036 55.000 0.00 0.00 0.00 4.46
748 749 2.029838 ATTGAAGCATCGACCTGGAC 57.970 50.000 0.00 0.00 0.00 4.02
771 772 0.370273 CGTGCTACGCTAAAGCCAAG 59.630 55.000 0.00 0.00 39.30 3.61
827 828 3.197434 CATGCATGCCATCAAGTATCG 57.803 47.619 14.93 0.00 29.71 2.92
864 865 1.271108 TGTATTTCGAACTGCCTGCCA 60.271 47.619 0.00 0.00 0.00 4.92
892 893 3.654178 GCATGCAGATGCGGATTTT 57.346 47.368 14.21 0.00 45.50 1.82
927 1058 5.625251 CGTCGTCTACATATTTATACGGCT 58.375 41.667 8.98 0.00 33.15 5.52
978 1110 2.036992 GGAGATGGTCGATCAGCTGAAT 59.963 50.000 23.20 8.40 33.11 2.57
1253 1410 6.762333 AGTTTCTTACCTAAAGCGGAAGTTA 58.238 36.000 0.00 0.00 34.97 2.24
1286 1443 3.473625 AGGTGACGAAAAAGGAAACGAT 58.526 40.909 0.00 0.00 0.00 3.73
1330 1487 5.741011 ACAGCAATAATTCCGACTAAAGGA 58.259 37.500 0.00 0.00 35.69 3.36
1334 1491 4.570772 GCTGACAGCAATAATTCCGACTAA 59.429 41.667 22.62 0.00 41.89 2.24
1389 1546 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
1390 1547 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
1391 1548 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
1394 1551 8.909671 CCCTAAACGCTCTTATATTAGTTTACG 58.090 37.037 0.00 0.00 34.29 3.18
1395 1552 9.971922 TCCCTAAACGCTCTTATATTAGTTTAC 57.028 33.333 0.00 0.00 34.29 2.01
1399 1556 7.836479 ACTCCCTAAACGCTCTTATATTAGT 57.164 36.000 0.00 0.00 0.00 2.24
1400 1557 9.012161 AGTACTCCCTAAACGCTCTTATATTAG 57.988 37.037 0.00 0.00 0.00 1.73
1404 1561 6.604795 ACAAGTACTCCCTAAACGCTCTTATA 59.395 38.462 0.00 0.00 0.00 0.98
1407 1564 3.577415 ACAAGTACTCCCTAAACGCTCTT 59.423 43.478 0.00 0.00 0.00 2.85
1408 1565 3.163467 ACAAGTACTCCCTAAACGCTCT 58.837 45.455 0.00 0.00 0.00 4.09
1409 1566 3.589495 ACAAGTACTCCCTAAACGCTC 57.411 47.619 0.00 0.00 0.00 5.03
1410 1567 6.973460 ATATACAAGTACTCCCTAAACGCT 57.027 37.500 0.00 0.00 0.00 5.07
1943 2247 3.194620 TGACCCTAAAATCCTAAGGCCA 58.805 45.455 5.01 0.00 0.00 5.36
1950 2254 5.734031 AAATAGCCTGACCCTAAAATCCT 57.266 39.130 0.00 0.00 0.00 3.24
2085 2423 1.519455 CTCCCGCGAGCTAAAGTGG 60.519 63.158 8.23 8.47 37.74 4.00
2170 2508 3.302161 ACCCAAAACCTTTAGTCCCAAC 58.698 45.455 0.00 0.00 0.00 3.77
2171 2509 3.691698 ACCCAAAACCTTTAGTCCCAA 57.308 42.857 0.00 0.00 0.00 4.12
2191 2529 4.263025 GGAACTAAAGGGTCGGGACTAAAA 60.263 45.833 0.00 0.00 31.06 1.52
2201 2539 3.072211 CTGAAACCGGAACTAAAGGGTC 58.928 50.000 9.46 0.00 30.99 4.46
2233 2571 2.757077 CGGTTCCAGAGGGCCTTT 59.243 61.111 7.89 0.00 0.00 3.11
2245 2583 3.849002 GGGTCTTTAGTCCCGGTTC 57.151 57.895 0.00 0.00 33.91 3.62
2253 2591 6.266330 ACACTAGTAGAAAACGGGTCTTTAGT 59.734 38.462 3.59 0.00 30.55 2.24
2254 2592 6.585322 CACACTAGTAGAAAACGGGTCTTTAG 59.415 42.308 3.59 0.00 0.00 1.85
2260 2599 3.385755 ACACACACTAGTAGAAAACGGGT 59.614 43.478 3.59 0.00 0.00 5.28
2273 2612 4.999311 ACTCTCATACACGTACACACACTA 59.001 41.667 0.00 0.00 0.00 2.74
2275 2614 4.156664 ACTCTCATACACGTACACACAC 57.843 45.455 0.00 0.00 0.00 3.82
2345 2684 1.590238 GCAACTCGATCGATCCTGTTG 59.410 52.381 32.02 32.02 38.43 3.33
2347 2686 1.107114 AGCAACTCGATCGATCCTGT 58.893 50.000 19.78 14.71 0.00 4.00
2413 2757 4.622260 TCACTCATGACAATCTTCCACA 57.378 40.909 0.00 0.00 0.00 4.17
2534 2879 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2538 2883 6.015856 CGTATTCTCTCTCTCTCTCTCTCTCT 60.016 46.154 0.00 0.00 0.00 3.10
2542 2887 6.323996 TCTTCGTATTCTCTCTCTCTCTCTCT 59.676 42.308 0.00 0.00 0.00 3.10
2546 2891 6.826668 TCATCTTCGTATTCTCTCTCTCTCT 58.173 40.000 0.00 0.00 0.00 3.10
2550 2895 5.530915 CACCTCATCTTCGTATTCTCTCTCT 59.469 44.000 0.00 0.00 0.00 3.10
2552 2897 4.582656 CCACCTCATCTTCGTATTCTCTCT 59.417 45.833 0.00 0.00 0.00 3.10
2560 2905 2.803956 ACTCACCACCTCATCTTCGTA 58.196 47.619 0.00 0.00 0.00 3.43
2602 2961 0.240945 CGGGTGATTTTGTGCTGACC 59.759 55.000 0.00 0.00 0.00 4.02
2628 2987 3.320826 CCAGAAAATTTTCGTCCCTTGGT 59.679 43.478 21.98 2.07 41.92 3.67
2846 3466 4.037803 ACATTGCTCATGTAAACACTGCAA 59.962 37.500 16.13 16.13 45.00 4.08
3017 4154 9.337396 ATGTACATACTACATACCATGTTTTGG 57.663 33.333 6.56 0.00 41.63 3.28
3590 4963 0.119155 ACCCATCTCAGTCCCAAGGA 59.881 55.000 0.00 0.00 0.00 3.36
3733 5220 8.888579 AATCATCTATCCCTAAAGTGTAAACG 57.111 34.615 0.00 0.00 0.00 3.60
3765 5253 2.807676 AGCCAGTCCCAAAAACCTATG 58.192 47.619 0.00 0.00 0.00 2.23
3800 5331 6.552859 TCGCACTGAAAAATGTTCATCTTA 57.447 33.333 0.00 0.00 0.00 2.10
3866 5416 4.278419 GTGCTAACATGTGGTCCTTTTCTT 59.722 41.667 0.00 0.00 0.00 2.52
4243 5811 4.829492 ACAGCCTGAAGAGCTTACAAATTT 59.171 37.500 0.00 0.00 38.95 1.82
4259 5827 2.717639 AGGTATTTAGCCACAGCCTG 57.282 50.000 0.00 0.00 41.25 4.85
4262 5830 7.745620 ATATTGTTAGGTATTTAGCCACAGC 57.254 36.000 0.00 0.00 40.32 4.40
4351 5920 3.200825 AGATGTCCCGATGGTTTCAAGAT 59.799 43.478 0.00 0.00 0.00 2.40
4360 5929 3.413846 AATGATGAGATGTCCCGATGG 57.586 47.619 0.00 0.00 0.00 3.51
4570 6211 2.037251 ACCCGAGGAAACATCATATCCG 59.963 50.000 0.00 0.00 38.31 4.18
4981 6658 8.831550 GGAAATTTAAGAGCATACTCAACCTAG 58.168 37.037 0.00 0.00 46.09 3.02
5407 8856 3.979495 GCAGCAGCAAGATAACAATATGC 59.021 43.478 0.00 0.00 41.58 3.14
5584 9049 5.278957 CCAACTCCACTTACAAAATGAAGGG 60.279 44.000 0.00 0.00 0.00 3.95
5753 9228 5.350365 CGGTTTTGTATTGCAGAAGCTACTA 59.650 40.000 5.86 0.00 42.74 1.82
5887 9404 5.019470 TCAGACATCATAGACCTCAACAGT 58.981 41.667 0.00 0.00 0.00 3.55
6044 9561 7.205515 ACTCCTTGTATTCTTGATCTTGGAT 57.794 36.000 0.00 0.00 0.00 3.41
6157 9675 2.503375 GACCGTGACGTGCGTAGG 60.503 66.667 3.64 4.70 0.00 3.18
6280 9807 2.293399 GTGGCAACCATCGGGATATTTC 59.707 50.000 0.00 0.00 35.28 2.17
6289 9816 1.066908 AGTTTGTTGTGGCAACCATCG 59.933 47.619 9.17 0.00 35.28 3.84
6301 10530 7.591057 CACCACATATCTGTTTACAGTTTGTTG 59.409 37.037 9.53 9.61 44.12 3.33
6451 11522 2.160721 TCGCCTGGAACTCCTAAGAT 57.839 50.000 0.00 0.00 36.82 2.40
6579 13403 6.986817 AGGTCGAAAATACATGAGACAATAGG 59.013 38.462 0.00 0.00 0.00 2.57
6637 14058 7.565398 TGCTCTCCCTCTGTAGTAAATAGATTT 59.435 37.037 0.00 0.00 0.00 2.17
6982 14404 7.314393 GCAAAATACACGGAACCCTTAATTTA 58.686 34.615 0.00 0.00 0.00 1.40
7024 14449 5.845103 TCTCAAGAGAGCATCAGATTGATC 58.155 41.667 0.00 0.00 41.81 2.92
7069 14495 3.129813 CAGTGTATCCGTACTGCTGGTTA 59.870 47.826 0.00 0.00 38.01 2.85
7250 14781 1.437986 GGCAGATACGGAGCTTCGT 59.562 57.895 25.82 25.82 45.88 3.85
7252 14783 1.951631 GCGGCAGATACGGAGCTTC 60.952 63.158 0.00 0.00 0.00 3.86
7259 14790 3.254654 CACCACGCGGCAGATACG 61.255 66.667 12.47 0.00 34.57 3.06
7267 14798 0.591170 AAAAGATCAACACCACGCGG 59.409 50.000 12.47 0.00 38.77 6.46
7268 14799 1.531149 AGAAAAGATCAACACCACGCG 59.469 47.619 3.53 3.53 0.00 6.01
7304 14835 2.540515 CGAGTACAATGCCGAGAATGT 58.459 47.619 0.00 0.00 0.00 2.71
7306 14837 1.137086 AGCGAGTACAATGCCGAGAAT 59.863 47.619 0.00 0.00 0.00 2.40
7360 14891 4.928601 TCTATGACAAGTATTTCCGGACG 58.071 43.478 1.83 0.00 0.00 4.79
7408 14939 9.143631 TCCAGCGTACTTAACTCTATTTAAAAC 57.856 33.333 0.00 0.00 0.00 2.43
7411 14942 7.123247 ACCTCCAGCGTACTTAACTCTATTTAA 59.877 37.037 0.00 0.00 0.00 1.52
7511 15043 0.179140 GCACCGTATTTGCACCATGG 60.179 55.000 11.19 11.19 39.93 3.66
7539 15071 3.930848 AGATTGGACGTACGTTTGGATTC 59.069 43.478 23.70 14.16 0.00 2.52
7540 15072 3.682858 CAGATTGGACGTACGTTTGGATT 59.317 43.478 23.70 5.82 0.00 3.01
7549 15081 1.693083 GCCACGCAGATTGGACGTAC 61.693 60.000 0.00 0.00 38.09 3.67
7574 15106 2.584608 GTGGGTCACCGCTATGCT 59.415 61.111 0.00 0.00 44.06 3.79
7630 15162 1.635663 AAAAGAATCCTCGTGCGCGG 61.636 55.000 21.04 10.43 38.89 6.46
7632 15164 2.158841 TGTAAAAAGAATCCTCGTGCGC 59.841 45.455 0.00 0.00 0.00 6.09
7730 15262 8.017946 GCTCGGATATAATTGGACAAAGATTTC 58.982 37.037 0.00 0.00 0.00 2.17
7735 15267 6.618287 TTGCTCGGATATAATTGGACAAAG 57.382 37.500 0.00 0.00 0.00 2.77
7789 15321 3.432252 GGTTGTACCTGTCAATGAAGACG 59.568 47.826 0.00 0.00 41.41 4.18
7797 15329 2.226330 GTGCATGGTTGTACCTGTCAA 58.774 47.619 0.00 0.00 39.58 3.18
7807 15339 1.243342 ATGTCCCGTGTGCATGGTTG 61.243 55.000 9.33 0.00 35.70 3.77
7823 15355 6.879458 GGTAGAGTGTTAAATTCTGTGGATGT 59.121 38.462 0.00 0.00 0.00 3.06
7834 15366 4.202524 TGCACAAGGGGTAGAGTGTTAAAT 60.203 41.667 0.00 0.00 34.59 1.40
7871 15403 4.769063 TACACCCCATGCGCACGG 62.769 66.667 17.26 17.26 0.00 4.94
7872 15404 3.496131 GTACACCCCATGCGCACG 61.496 66.667 14.90 3.27 0.00 5.34
7888 15420 3.049344 GGGGTCCAGGAAATCTCTATGT 58.951 50.000 0.00 0.00 0.00 2.29
7891 15423 1.007963 ACGGGGTCCAGGAAATCTCTA 59.992 52.381 0.00 0.00 0.00 2.43
7927 15459 4.169856 AGAAGTCCTCATGGTATCCTCTCT 59.830 45.833 0.00 0.00 34.23 3.10
7952 15484 6.461509 GGAAGAGTTTCATCAAAAGCCTTTCA 60.462 38.462 0.00 0.00 34.90 2.69
7955 15487 4.895297 TGGAAGAGTTTCATCAAAAGCCTT 59.105 37.500 0.00 0.00 34.90 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.