Multiple sequence alignment - TraesCS2B01G444700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G444700 chr2B 100.000 3762 0 0 603 4364 637571551 637575312 0.000000e+00 6948
1 TraesCS2B01G444700 chr2B 100.000 296 0 0 1 296 637570949 637571244 8.250000e-152 547
2 TraesCS2B01G444700 chr2B 87.382 317 15 11 5 296 710976104 710975788 1.500000e-89 340
3 TraesCS2B01G444700 chr2B 91.667 228 14 2 8 230 290601875 290601648 1.180000e-80 311
4 TraesCS2B01G444700 chr2B 85.149 303 24 9 5 294 642811566 642811272 1.540000e-74 291
5 TraesCS2B01G444700 chr2B 84.342 281 21 9 3 268 150988057 150988329 2.010000e-63 254
6 TraesCS2B01G444700 chr2A 91.883 1774 106 21 1957 3695 678961760 678963530 0.000000e+00 2444
7 TraesCS2B01G444700 chr2A 91.129 1116 72 19 902 1999 678960630 678961736 0.000000e+00 1487
8 TraesCS2B01G444700 chr2A 82.258 558 38 19 3828 4364 678963604 678964121 4.030000e-115 425
9 TraesCS2B01G444700 chr2A 87.541 305 17 9 5 296 72391296 72391592 2.520000e-87 333
10 TraesCS2B01G444700 chr2A 95.041 121 4 2 3687 3806 43132395 43132276 5.760000e-44 189
11 TraesCS2B01G444700 chr2D 90.698 1634 95 18 2098 3695 536149986 536151598 0.000000e+00 2122
12 TraesCS2B01G444700 chr2D 91.683 1491 83 17 621 2101 536148368 536149827 0.000000e+00 2028
13 TraesCS2B01G444700 chr2D 93.118 465 19 2 1008 1462 5146131 5145670 0.000000e+00 669
14 TraesCS2B01G444700 chr2D 90.119 506 44 4 1532 2035 5145667 5145166 0.000000e+00 652
15 TraesCS2B01G444700 chr2D 85.938 320 12 8 4071 4363 536151820 536152133 1.180000e-80 311
16 TraesCS2B01G444700 chr2D 91.429 105 5 1 3908 4008 536151723 536151827 1.640000e-29 141
17 TraesCS2B01G444700 chr6B 89.902 921 76 9 1373 2290 404363241 404362335 0.000000e+00 1170
18 TraesCS2B01G444700 chr6B 97.345 113 3 0 3693 3805 130967823 130967935 4.450000e-45 193
19 TraesCS2B01G444700 chr3B 88.720 922 86 8 1372 2290 46803080 46802174 0.000000e+00 1110
20 TraesCS2B01G444700 chr3B 88.274 921 91 9 1372 2290 158153485 158154390 0.000000e+00 1086
21 TraesCS2B01G444700 chr3B 85.174 317 22 12 5 296 761124499 761124815 7.090000e-78 302
22 TraesCS2B01G444700 chr5B 88.742 302 13 7 8 296 531335580 531335287 2.500000e-92 350
23 TraesCS2B01G444700 chr5B 87.097 279 15 9 31 296 536871414 536871684 3.300000e-76 296
24 TraesCS2B01G444700 chr5B 84.142 309 27 11 10 296 331819304 331818996 3.320000e-71 279
25 TraesCS2B01G444700 chr5B 88.966 145 12 4 3693 3836 82470122 82469981 4.490000e-40 176
26 TraesCS2B01G444700 chr7B 87.342 316 16 8 5 296 85037735 85038050 1.500000e-89 340
27 TraesCS2B01G444700 chr7B 85.333 300 25 10 7 294 673685037 673685329 4.270000e-75 292
28 TraesCS2B01G444700 chr1A 84.444 315 24 11 5 294 577584617 577584303 1.990000e-73 287
29 TraesCS2B01G444700 chr1A 85.000 300 24 8 10 296 584496340 584496631 7.140000e-73 285
30 TraesCS2B01G444700 chr5A 84.127 315 25 10 5 294 347169705 347170019 9.240000e-72 281
31 TraesCS2B01G444700 chr1B 83.810 315 26 11 5 294 63921617 63921303 4.300000e-70 276
32 TraesCS2B01G444700 chr1B 84.122 296 26 8 8 290 684835865 684836152 2.590000e-67 267
33 TraesCS2B01G444700 chr1B 81.931 321 25 14 5 296 603126077 603126393 1.570000e-59 241
34 TraesCS2B01G444700 chr6A 85.897 234 27 2 3 230 512868692 512868459 1.210000e-60 244
35 TraesCS2B01G444700 chr4B 97.368 114 2 1 3687 3800 529838364 529838252 4.450000e-45 193
36 TraesCS2B01G444700 chr3D 96.552 116 4 0 3690 3805 594424506 594424621 4.450000e-45 193
37 TraesCS2B01G444700 chr3D 95.082 122 4 2 3690 3809 490779699 490779578 1.600000e-44 191
38 TraesCS2B01G444700 chr4A 96.522 115 3 1 3694 3808 739527960 739528073 5.760000e-44 189
39 TraesCS2B01G444700 chr4A 92.248 129 6 4 3691 3817 548344071 548344197 3.470000e-41 180
40 TraesCS2B01G444700 chr4D 94.262 122 5 2 3690 3809 131123838 131123717 7.450000e-43 185


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G444700 chr2B 637570949 637575312 4363 False 3747.5 6948 100.000000 1 4364 2 chr2B.!!$F2 4363
1 TraesCS2B01G444700 chr2A 678960630 678964121 3491 False 1452.0 2444 88.423333 902 4364 3 chr2A.!!$F2 3462
2 TraesCS2B01G444700 chr2D 536148368 536152133 3765 False 1150.5 2122 89.937000 621 4363 4 chr2D.!!$F1 3742
3 TraesCS2B01G444700 chr2D 5145166 5146131 965 True 660.5 669 91.618500 1008 2035 2 chr2D.!!$R1 1027
4 TraesCS2B01G444700 chr6B 404362335 404363241 906 True 1170.0 1170 89.902000 1373 2290 1 chr6B.!!$R1 917
5 TraesCS2B01G444700 chr3B 46802174 46803080 906 True 1110.0 1110 88.720000 1372 2290 1 chr3B.!!$R1 918
6 TraesCS2B01G444700 chr3B 158153485 158154390 905 False 1086.0 1086 88.274000 1372 2290 1 chr3B.!!$F1 918

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
137 138 0.037605 GGGCTTGCACGTACAGTACT 60.038 55.0 9.10 0.00 0.00 2.73 F
259 260 0.104120 AAGTTCGGGTTTTGCAAGCC 59.896 50.0 12.17 12.17 45.82 4.35 F
759 760 0.248289 GGTAGCTGCCGAACTAACCA 59.752 55.0 4.63 0.00 0.00 3.67 F
953 956 0.645868 CGAGAAAATTCGAGGCCGAC 59.354 55.0 0.00 0.00 45.50 4.79 F
2534 2798 0.526524 GTCTGCCGATCAGTCTTCCG 60.527 60.0 0.00 0.00 43.32 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1329 1348 0.392998 AGCCGGAAATCAGCACGAAT 60.393 50.000 5.05 0.00 0.00 3.34 R
2251 2514 1.273606 CGACCTCTGTCACATTGTCCT 59.726 52.381 0.00 0.00 41.85 3.85 R
2459 2723 0.182299 AGCTTCTCCATAAGGCCAGC 59.818 55.000 5.01 0.72 33.50 4.85 R
2925 3228 1.863454 CACGAGTGCAGAATAGATGGC 59.137 52.381 0.00 0.00 0.00 4.40 R
4003 4433 0.250597 TGCTGCTGAGTGCTGACATT 60.251 50.000 0.00 0.00 42.27 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.329545 GGCCGGGCTTGACACTCA 62.330 66.667 22.87 0.00 0.00 3.41
30 31 2.743928 GCCGGGCTTGACACTCAG 60.744 66.667 12.87 0.00 0.00 3.35
31 32 2.046892 CCGGGCTTGACACTCAGG 60.047 66.667 0.00 0.00 0.00 3.86
35 36 3.978272 GCTTGACACTCAGGCCAG 58.022 61.111 5.01 0.00 42.78 4.85
36 37 1.673665 GCTTGACACTCAGGCCAGG 60.674 63.158 5.01 0.00 42.78 4.45
37 38 1.673665 CTTGACACTCAGGCCAGGC 60.674 63.158 5.01 1.26 0.00 4.85
38 39 2.121992 CTTGACACTCAGGCCAGGCT 62.122 60.000 12.43 0.00 0.00 4.58
39 40 2.116983 TTGACACTCAGGCCAGGCTC 62.117 60.000 12.43 1.02 0.00 4.70
40 41 3.655810 GACACTCAGGCCAGGCTCG 62.656 68.421 12.43 2.50 0.00 5.03
41 42 4.463879 CACTCAGGCCAGGCTCGG 62.464 72.222 12.43 2.43 0.00 4.63
49 50 2.282462 CCAGGCTCGGGCTTTGTT 60.282 61.111 7.48 0.00 35.88 2.83
50 51 1.903404 CCAGGCTCGGGCTTTGTTT 60.903 57.895 7.48 0.00 35.88 2.83
51 52 1.463553 CCAGGCTCGGGCTTTGTTTT 61.464 55.000 7.48 0.00 35.88 2.43
52 53 0.318955 CAGGCTCGGGCTTTGTTTTG 60.319 55.000 7.48 0.00 35.88 2.44
53 54 1.664649 GGCTCGGGCTTTGTTTTGC 60.665 57.895 7.48 0.00 38.73 3.68
54 55 1.067250 GCTCGGGCTTTGTTTTGCA 59.933 52.632 0.00 0.00 35.22 4.08
55 56 0.940991 GCTCGGGCTTTGTTTTGCAG 60.941 55.000 0.00 0.00 35.22 4.41
56 57 0.940991 CTCGGGCTTTGTTTTGCAGC 60.941 55.000 0.00 0.00 0.00 5.25
57 58 1.955663 CGGGCTTTGTTTTGCAGCC 60.956 57.895 2.37 2.37 44.31 4.85
58 59 4.047834 GGCTTTGTTTTGCAGCCC 57.952 55.556 0.00 0.00 39.57 5.19
59 60 1.955663 GGCTTTGTTTTGCAGCCCG 60.956 57.895 0.00 0.00 39.57 6.13
60 61 1.067250 GCTTTGTTTTGCAGCCCGA 59.933 52.632 0.00 0.00 0.00 5.14
61 62 0.529555 GCTTTGTTTTGCAGCCCGAA 60.530 50.000 0.00 0.00 0.00 4.30
62 63 1.933247 CTTTGTTTTGCAGCCCGAAA 58.067 45.000 0.00 0.00 0.00 3.46
63 64 1.860326 CTTTGTTTTGCAGCCCGAAAG 59.140 47.619 0.00 0.00 0.00 2.62
75 76 4.196965 CGAAAGGTAGTTCGGGCC 57.803 61.111 0.00 0.00 45.21 5.80
76 77 1.808390 CGAAAGGTAGTTCGGGCCG 60.808 63.158 22.51 22.51 45.21 6.13
77 78 1.449070 GAAAGGTAGTTCGGGCCGG 60.449 63.158 27.98 7.65 0.00 6.13
78 79 2.864378 GAAAGGTAGTTCGGGCCGGG 62.864 65.000 27.98 0.00 0.00 5.73
81 82 4.525949 GTAGTTCGGGCCGGGCTC 62.526 72.222 28.80 15.19 0.00 4.70
92 93 3.775654 CGGGCTCGGGCTTCTCTT 61.776 66.667 7.48 0.00 38.73 2.85
93 94 2.671682 GGGCTCGGGCTTCTCTTT 59.328 61.111 7.48 0.00 38.73 2.52
94 95 1.002011 GGGCTCGGGCTTCTCTTTT 60.002 57.895 7.48 0.00 38.73 2.27
95 96 0.609406 GGGCTCGGGCTTCTCTTTTT 60.609 55.000 7.48 0.00 38.73 1.94
96 97 0.805614 GGCTCGGGCTTCTCTTTTTC 59.194 55.000 7.48 0.00 38.73 2.29
97 98 1.611936 GGCTCGGGCTTCTCTTTTTCT 60.612 52.381 7.48 0.00 38.73 2.52
98 99 2.354805 GGCTCGGGCTTCTCTTTTTCTA 60.355 50.000 7.48 0.00 38.73 2.10
99 100 3.536570 GCTCGGGCTTCTCTTTTTCTAT 58.463 45.455 0.00 0.00 35.22 1.98
100 101 3.942115 GCTCGGGCTTCTCTTTTTCTATT 59.058 43.478 0.00 0.00 35.22 1.73
101 102 4.396478 GCTCGGGCTTCTCTTTTTCTATTT 59.604 41.667 0.00 0.00 35.22 1.40
102 103 5.106118 GCTCGGGCTTCTCTTTTTCTATTTT 60.106 40.000 0.00 0.00 35.22 1.82
103 104 6.570571 GCTCGGGCTTCTCTTTTTCTATTTTT 60.571 38.462 0.00 0.00 35.22 1.94
117 118 3.044280 TTTTTCGGCCGGGCTTTC 58.956 55.556 27.83 0.76 0.00 2.62
118 119 2.910345 TTTTTCGGCCGGGCTTTCG 61.910 57.895 27.83 14.28 0.00 3.46
127 128 4.056125 GGGCTTTCGGGCTTGCAC 62.056 66.667 0.00 0.00 40.65 4.57
128 129 4.404654 GGCTTTCGGGCTTGCACG 62.405 66.667 11.34 11.34 37.53 5.34
129 130 3.660111 GCTTTCGGGCTTGCACGT 61.660 61.111 16.92 0.00 0.00 4.49
130 131 2.322081 GCTTTCGGGCTTGCACGTA 61.322 57.895 16.92 4.69 0.00 3.57
131 132 1.495951 CTTTCGGGCTTGCACGTAC 59.504 57.895 16.92 0.00 0.00 3.67
132 133 1.225376 CTTTCGGGCTTGCACGTACA 61.225 55.000 16.92 0.11 0.00 2.90
133 134 1.225376 TTTCGGGCTTGCACGTACAG 61.225 55.000 16.92 0.00 0.00 2.74
134 135 2.357034 CGGGCTTGCACGTACAGT 60.357 61.111 9.28 0.00 0.00 3.55
135 136 1.080366 CGGGCTTGCACGTACAGTA 60.080 57.895 9.28 0.00 0.00 2.74
136 137 1.349259 CGGGCTTGCACGTACAGTAC 61.349 60.000 9.28 0.00 0.00 2.73
137 138 0.037605 GGGCTTGCACGTACAGTACT 60.038 55.000 9.10 0.00 0.00 2.73
138 139 1.203052 GGGCTTGCACGTACAGTACTA 59.797 52.381 9.10 0.00 0.00 1.82
139 140 2.353011 GGGCTTGCACGTACAGTACTAA 60.353 50.000 9.10 0.00 0.00 2.24
140 141 3.319755 GGCTTGCACGTACAGTACTAAA 58.680 45.455 9.10 0.00 0.00 1.85
141 142 3.742369 GGCTTGCACGTACAGTACTAAAA 59.258 43.478 9.10 0.00 0.00 1.52
142 143 4.211794 GGCTTGCACGTACAGTACTAAAAA 59.788 41.667 9.10 0.00 0.00 1.94
158 159 3.666253 AAAAAGCGTTCGGGCCGG 61.666 61.111 27.98 11.59 0.00 6.13
177 178 2.359975 CTTTCGGGCTTCGGGCTT 60.360 61.111 1.83 0.00 41.46 4.35
178 179 2.671619 TTTCGGGCTTCGGGCTTG 60.672 61.111 1.83 0.00 41.46 4.01
179 180 3.185299 TTTCGGGCTTCGGGCTTGA 62.185 57.895 1.83 0.00 41.46 3.02
180 181 2.478335 TTTCGGGCTTCGGGCTTGAT 62.478 55.000 1.83 0.00 41.46 2.57
181 182 2.438434 CGGGCTTCGGGCTTGATT 60.438 61.111 1.83 0.00 41.46 2.57
182 183 2.046285 CGGGCTTCGGGCTTGATTT 61.046 57.895 1.83 0.00 41.46 2.17
183 184 1.595093 CGGGCTTCGGGCTTGATTTT 61.595 55.000 1.83 0.00 41.46 1.82
184 185 0.108662 GGGCTTCGGGCTTGATTTTG 60.109 55.000 1.83 0.00 41.46 2.44
185 186 0.108662 GGCTTCGGGCTTGATTTTGG 60.109 55.000 1.83 0.00 41.46 3.28
186 187 0.887933 GCTTCGGGCTTGATTTTGGA 59.112 50.000 0.00 0.00 38.06 3.53
187 188 1.402852 GCTTCGGGCTTGATTTTGGAC 60.403 52.381 0.00 0.00 38.06 4.02
188 189 1.202348 CTTCGGGCTTGATTTTGGACC 59.798 52.381 0.00 0.00 0.00 4.46
189 190 1.506262 CGGGCTTGATTTTGGACCG 59.494 57.895 0.00 0.00 45.36 4.79
190 191 1.890174 GGGCTTGATTTTGGACCGG 59.110 57.895 0.00 0.00 0.00 5.28
191 192 1.604147 GGGCTTGATTTTGGACCGGG 61.604 60.000 6.32 0.00 0.00 5.73
192 193 1.215382 GCTTGATTTTGGACCGGGC 59.785 57.895 6.32 0.21 0.00 6.13
193 194 1.250840 GCTTGATTTTGGACCGGGCT 61.251 55.000 7.57 0.00 0.00 5.19
194 195 0.811281 CTTGATTTTGGACCGGGCTC 59.189 55.000 7.57 0.00 0.00 4.70
195 196 0.958382 TTGATTTTGGACCGGGCTCG 60.958 55.000 7.57 0.00 0.00 5.03
205 206 2.438434 CGGGCTCGGGCTTGAAAT 60.438 61.111 7.48 0.00 38.73 2.17
206 207 2.472909 CGGGCTCGGGCTTGAAATC 61.473 63.158 7.48 0.00 38.73 2.17
207 208 1.378514 GGGCTCGGGCTTGAAATCA 60.379 57.895 7.48 0.00 38.73 2.57
208 209 0.965363 GGGCTCGGGCTTGAAATCAA 60.965 55.000 7.48 0.00 38.73 2.57
222 223 6.515272 TTGAAATCAAGGAGTATTTCTGGC 57.485 37.500 8.69 0.00 40.92 4.85
223 224 5.819991 TGAAATCAAGGAGTATTTCTGGCT 58.180 37.500 8.69 0.00 40.92 4.75
224 225 6.248433 TGAAATCAAGGAGTATTTCTGGCTT 58.752 36.000 8.69 0.00 40.92 4.35
225 226 6.375455 TGAAATCAAGGAGTATTTCTGGCTTC 59.625 38.462 8.69 0.00 40.92 3.86
226 227 3.861840 TCAAGGAGTATTTCTGGCTTCG 58.138 45.455 0.00 0.00 0.00 3.79
227 228 2.939103 CAAGGAGTATTTCTGGCTTCGG 59.061 50.000 0.00 0.00 0.00 4.30
228 229 1.486726 AGGAGTATTTCTGGCTTCGGG 59.513 52.381 0.00 0.00 0.00 5.14
229 230 1.300481 GAGTATTTCTGGCTTCGGGC 58.700 55.000 0.00 0.00 41.26 6.13
230 231 0.912486 AGTATTTCTGGCTTCGGGCT 59.088 50.000 1.83 0.00 41.46 5.19
231 232 1.282157 AGTATTTCTGGCTTCGGGCTT 59.718 47.619 1.83 0.00 41.46 4.35
232 233 2.504175 AGTATTTCTGGCTTCGGGCTTA 59.496 45.455 1.83 0.00 41.46 3.09
233 234 2.507407 ATTTCTGGCTTCGGGCTTAA 57.493 45.000 1.83 0.00 41.46 1.85
234 235 1.821216 TTTCTGGCTTCGGGCTTAAG 58.179 50.000 0.00 0.00 41.46 1.85
235 236 0.981183 TTCTGGCTTCGGGCTTAAGA 59.019 50.000 6.67 1.30 41.46 2.10
236 237 0.981183 TCTGGCTTCGGGCTTAAGAA 59.019 50.000 6.67 0.00 41.46 2.52
237 238 1.349688 TCTGGCTTCGGGCTTAAGAAA 59.650 47.619 6.67 0.00 41.46 2.52
238 239 2.026262 TCTGGCTTCGGGCTTAAGAAAT 60.026 45.455 6.67 0.00 41.46 2.17
239 240 2.091541 TGGCTTCGGGCTTAAGAAATG 58.908 47.619 6.67 0.00 41.46 2.32
240 241 2.290641 TGGCTTCGGGCTTAAGAAATGA 60.291 45.455 6.67 0.00 41.46 2.57
241 242 2.752903 GGCTTCGGGCTTAAGAAATGAA 59.247 45.455 6.67 3.49 41.46 2.57
242 243 3.181496 GGCTTCGGGCTTAAGAAATGAAG 60.181 47.826 6.67 13.26 41.46 3.02
243 244 3.440522 GCTTCGGGCTTAAGAAATGAAGT 59.559 43.478 19.37 0.00 38.06 3.01
244 245 4.082733 GCTTCGGGCTTAAGAAATGAAGTT 60.083 41.667 19.37 0.00 38.06 2.66
245 246 5.622770 TTCGGGCTTAAGAAATGAAGTTC 57.377 39.130 6.67 0.00 0.00 3.01
246 247 3.682858 TCGGGCTTAAGAAATGAAGTTCG 59.317 43.478 6.67 0.00 32.50 3.95
247 248 3.181510 CGGGCTTAAGAAATGAAGTTCGG 60.182 47.826 6.67 0.00 32.50 4.30
248 249 3.128764 GGGCTTAAGAAATGAAGTTCGGG 59.871 47.826 6.67 0.00 32.50 5.14
249 250 3.756963 GGCTTAAGAAATGAAGTTCGGGT 59.243 43.478 6.67 0.00 32.50 5.28
250 251 4.217767 GGCTTAAGAAATGAAGTTCGGGTT 59.782 41.667 6.67 0.00 32.50 4.11
251 252 5.278808 GGCTTAAGAAATGAAGTTCGGGTTT 60.279 40.000 6.67 0.00 32.50 3.27
252 253 6.213677 GCTTAAGAAATGAAGTTCGGGTTTT 58.786 36.000 6.67 0.00 32.50 2.43
253 254 6.143919 GCTTAAGAAATGAAGTTCGGGTTTTG 59.856 38.462 6.67 0.00 32.50 2.44
254 255 3.977427 AGAAATGAAGTTCGGGTTTTGC 58.023 40.909 0.00 0.00 32.50 3.68
255 256 3.383185 AGAAATGAAGTTCGGGTTTTGCA 59.617 39.130 0.00 0.00 32.50 4.08
256 257 3.810310 AATGAAGTTCGGGTTTTGCAA 57.190 38.095 0.00 0.00 0.00 4.08
257 258 2.861462 TGAAGTTCGGGTTTTGCAAG 57.139 45.000 0.00 0.00 0.00 4.01
258 259 1.202359 TGAAGTTCGGGTTTTGCAAGC 60.202 47.619 0.00 0.00 0.00 4.01
259 260 0.104120 AAGTTCGGGTTTTGCAAGCC 59.896 50.000 12.17 12.17 45.82 4.35
260 261 1.300620 GTTCGGGTTTTGCAAGCCC 60.301 57.895 23.66 23.66 46.47 5.19
263 264 4.680237 GGGTTTTGCAAGCCCGGC 62.680 66.667 20.69 0.00 43.84 6.13
264 265 4.680237 GGTTTTGCAAGCCCGGCC 62.680 66.667 5.55 0.00 0.00 6.13
265 266 3.615709 GTTTTGCAAGCCCGGCCT 61.616 61.111 5.55 0.00 0.00 5.19
266 267 3.614698 TTTTGCAAGCCCGGCCTG 61.615 61.111 5.55 4.37 0.00 4.85
267 268 4.594854 TTTGCAAGCCCGGCCTGA 62.595 61.111 12.50 0.00 0.00 3.86
268 269 4.594854 TTGCAAGCCCGGCCTGAA 62.595 61.111 12.50 0.00 0.00 3.02
269 270 4.594854 TGCAAGCCCGGCCTGAAA 62.595 61.111 12.50 0.00 0.00 2.69
270 271 4.056125 GCAAGCCCGGCCTGAAAC 62.056 66.667 12.50 0.00 0.00 2.78
271 272 3.373565 CAAGCCCGGCCTGAAACC 61.374 66.667 5.55 0.00 0.00 3.27
272 273 4.678743 AAGCCCGGCCTGAAACCC 62.679 66.667 5.55 0.00 0.00 4.11
621 622 2.445682 TTTTGGCTGTGTACAGGGTT 57.554 45.000 13.41 0.00 43.94 4.11
622 623 2.445682 TTTGGCTGTGTACAGGGTTT 57.554 45.000 13.41 0.00 43.94 3.27
623 624 2.445682 TTGGCTGTGTACAGGGTTTT 57.554 45.000 13.41 0.00 43.94 2.43
624 625 1.975660 TGGCTGTGTACAGGGTTTTC 58.024 50.000 13.41 0.00 43.94 2.29
627 628 3.244422 TGGCTGTGTACAGGGTTTTCTAG 60.244 47.826 13.41 0.00 43.94 2.43
648 649 4.552166 GCAAGCGCTAAATAGGAAATCA 57.448 40.909 12.05 0.00 34.30 2.57
675 676 2.227194 AGAAAACGATTTGCTTCCGGT 58.773 42.857 0.00 0.00 0.00 5.28
697 698 1.463553 AAAGGCCAGCTTTGTTCCCG 61.464 55.000 5.01 0.00 0.00 5.14
701 702 1.898574 CCAGCTTTGTTCCCGCACT 60.899 57.895 0.00 0.00 0.00 4.40
702 703 0.605319 CCAGCTTTGTTCCCGCACTA 60.605 55.000 0.00 0.00 0.00 2.74
746 747 4.410400 GCCAGCCCAACGGTAGCT 62.410 66.667 0.00 0.00 37.32 3.32
758 759 3.061093 GGTAGCTGCCGAACTAACC 57.939 57.895 4.63 0.00 0.00 2.85
759 760 0.248289 GGTAGCTGCCGAACTAACCA 59.752 55.000 4.63 0.00 0.00 3.67
837 838 1.172180 CCGTTTGCTCCTGCTTTCCA 61.172 55.000 0.00 0.00 40.48 3.53
848 850 2.373224 CTGCTTTCCATCCCTCTTTCC 58.627 52.381 0.00 0.00 0.00 3.13
942 945 0.991920 TGCTTCCTCCCCGAGAAAAT 59.008 50.000 0.00 0.00 0.00 1.82
953 956 0.645868 CGAGAAAATTCGAGGCCGAC 59.354 55.000 0.00 0.00 45.50 4.79
1258 1262 2.279469 GACCTCGTCGAAATCTGCG 58.721 57.895 0.00 0.00 0.00 5.18
1329 1348 2.091885 GGATTGGATGGGTCCTGCTAAA 60.092 50.000 0.00 0.00 45.32 1.85
1474 1493 2.173669 GGACATCGCCACCATCGTG 61.174 63.158 0.00 0.00 39.91 4.35
1619 1640 2.294512 TGCACTCTGCTCTGGATATACG 59.705 50.000 0.00 0.00 45.31 3.06
1631 1653 6.331577 TCTGGATATACGGCCCTTAGTATA 57.668 41.667 9.74 9.74 39.30 1.47
1644 1668 8.463607 CGGCCCTTAGTATATTTTTCTTTTTGA 58.536 33.333 0.00 0.00 0.00 2.69
1702 1735 5.010820 TGTCATTTTCATTCATCACCTGCAA 59.989 36.000 0.00 0.00 0.00 4.08
1714 1747 4.339872 TCACCTGCAATGCATTTTCTTT 57.660 36.364 8.91 0.00 38.13 2.52
1717 1750 6.465948 TCACCTGCAATGCATTTTCTTTAAT 58.534 32.000 8.91 0.00 38.13 1.40
1810 1843 5.440610 ACAGGAGTATTAGGAAATTGCCAG 58.559 41.667 4.92 0.00 0.00 4.85
1834 1867 4.513318 GCTAGCTTAGAATAGTTTGCCTGG 59.487 45.833 7.70 0.00 0.00 4.45
1939 1972 1.035139 CTTGCCAGGACAGCAACTTT 58.965 50.000 0.00 0.00 44.95 2.66
1943 1976 2.230660 GCCAGGACAGCAACTTTAGTT 58.769 47.619 0.00 0.00 39.12 2.24
1985 2084 7.944554 TGAATAATCTTTCTGGGGATATTCACC 59.055 37.037 0.00 0.00 41.45 4.02
2108 2370 3.911894 TGTTTGGGCTACCCTAGTTAACT 59.088 43.478 13.68 13.68 45.70 2.24
2109 2371 4.019950 TGTTTGGGCTACCCTAGTTAACTC 60.020 45.833 12.39 0.00 45.70 3.01
2113 2375 4.016292 TGGGCTACCCTAGTTAACTCCTTA 60.016 45.833 12.39 0.00 45.70 2.69
2251 2514 8.086143 ACCTTAGTTATTATTACCTGCACTCA 57.914 34.615 0.00 0.00 0.00 3.41
2337 2601 4.739587 ATCTACTCCCGTTCCTCTTTTC 57.260 45.455 0.00 0.00 0.00 2.29
2345 2609 5.001232 TCCCGTTCCTCTTTTCATTTGTAG 58.999 41.667 0.00 0.00 0.00 2.74
2389 2653 8.760569 GCACTGAGAGTTATTAAGAAGCTAATC 58.239 37.037 0.00 0.00 0.00 1.75
2405 2669 6.726490 AGCTAATCGAGAACCCTAAATACA 57.274 37.500 0.00 0.00 0.00 2.29
2406 2670 7.120923 AGCTAATCGAGAACCCTAAATACAA 57.879 36.000 0.00 0.00 0.00 2.41
2459 2723 4.701651 TCATTGCACCTAAGTCCAATCTTG 59.298 41.667 0.00 0.00 0.00 3.02
2515 2779 6.218019 TGCAATTGTTCTTTCAAAGGATGAG 58.782 36.000 7.40 0.00 39.77 2.90
2534 2798 0.526524 GTCTGCCGATCAGTCTTCCG 60.527 60.000 0.00 0.00 43.32 4.30
2544 2808 3.655276 TCAGTCTTCCGTTGTAAGTCC 57.345 47.619 0.00 0.00 0.00 3.85
2570 2834 9.525409 CTTTAGATTATCTTTTCCAAGCCATTG 57.475 33.333 0.00 0.00 36.09 2.82
2571 2835 8.593945 TTAGATTATCTTTTCCAAGCCATTGT 57.406 30.769 0.00 0.00 34.39 2.71
2598 2862 8.970020 TGTGTTGCCTGATTATGATTTTCTATT 58.030 29.630 0.00 0.00 0.00 1.73
2738 3014 3.774766 TCTATTACTGAGAAGCTTGCCCA 59.225 43.478 2.10 0.00 0.00 5.36
2765 3041 4.039973 TCTCCTTTTGTACCGTTCAGTCAT 59.960 41.667 0.00 0.00 0.00 3.06
2781 3057 7.849515 CGTTCAGTCATAATGATCTCAACATTG 59.150 37.037 0.00 0.00 38.25 2.82
2794 3096 8.253810 TGATCTCAACATTGAAGTCTACTTAGG 58.746 37.037 0.00 0.00 36.64 2.69
2795 3097 6.398918 TCTCAACATTGAAGTCTACTTAGGC 58.601 40.000 0.00 0.00 36.64 3.93
2796 3098 6.211584 TCTCAACATTGAAGTCTACTTAGGCT 59.788 38.462 0.00 0.00 40.61 4.58
2797 3099 6.166279 TCAACATTGAAGTCTACTTAGGCTG 58.834 40.000 0.00 0.00 38.47 4.85
2798 3100 5.746990 ACATTGAAGTCTACTTAGGCTGT 57.253 39.130 0.00 0.00 38.47 4.40
2799 3101 6.115448 ACATTGAAGTCTACTTAGGCTGTT 57.885 37.500 0.00 0.00 38.47 3.16
2800 3102 6.534634 ACATTGAAGTCTACTTAGGCTGTTT 58.465 36.000 0.00 0.00 38.47 2.83
2801 3103 6.651225 ACATTGAAGTCTACTTAGGCTGTTTC 59.349 38.462 0.00 0.00 38.47 2.78
2802 3104 6.420913 TTGAAGTCTACTTAGGCTGTTTCT 57.579 37.500 0.00 0.00 38.47 2.52
2803 3105 6.026947 TGAAGTCTACTTAGGCTGTTTCTC 57.973 41.667 0.00 0.00 38.47 2.87
2804 3106 5.775701 TGAAGTCTACTTAGGCTGTTTCTCT 59.224 40.000 0.00 0.00 38.47 3.10
2805 3107 6.267928 TGAAGTCTACTTAGGCTGTTTCTCTT 59.732 38.462 0.00 0.00 38.47 2.85
2806 3108 6.275494 AGTCTACTTAGGCTGTTTCTCTTC 57.725 41.667 0.00 0.00 36.79 2.87
2807 3109 6.014012 AGTCTACTTAGGCTGTTTCTCTTCT 58.986 40.000 0.00 0.00 36.79 2.85
2808 3110 6.495526 AGTCTACTTAGGCTGTTTCTCTTCTT 59.504 38.462 0.00 0.00 36.79 2.52
2809 3111 7.015779 AGTCTACTTAGGCTGTTTCTCTTCTTT 59.984 37.037 0.00 0.00 36.79 2.52
2810 3112 7.117092 GTCTACTTAGGCTGTTTCTCTTCTTTG 59.883 40.741 0.00 0.00 0.00 2.77
2811 3113 5.685728 ACTTAGGCTGTTTCTCTTCTTTGT 58.314 37.500 0.00 0.00 0.00 2.83
2812 3114 5.529060 ACTTAGGCTGTTTCTCTTCTTTGTG 59.471 40.000 0.00 0.00 0.00 3.33
2824 3126 3.811497 TCTTCTTTGTGACACTGATGCAG 59.189 43.478 7.20 0.00 37.52 4.41
2830 3132 5.611796 TTGTGACACTGATGCAGTTATTC 57.388 39.130 7.20 0.00 42.59 1.75
2837 3139 5.769662 ACACTGATGCAGTTATTCTCCAAAA 59.230 36.000 0.00 0.00 42.59 2.44
2838 3140 6.088824 CACTGATGCAGTTATTCTCCAAAAC 58.911 40.000 0.00 0.00 42.59 2.43
2842 3144 6.211184 TGATGCAGTTATTCTCCAAAACCATT 59.789 34.615 0.00 0.00 0.00 3.16
2894 3196 8.930846 TTAGTTGGTGTACTCTACTTAACTCT 57.069 34.615 8.46 0.00 32.96 3.24
2925 3228 6.709397 ACATATTGCAGGTATGTGAGATTGAG 59.291 38.462 19.85 0.00 40.32 3.02
2932 3235 5.011431 CAGGTATGTGAGATTGAGCCATCTA 59.989 44.000 0.00 0.00 0.00 1.98
3285 3588 1.607801 GCCACAAGAATGGGCTTCCC 61.608 60.000 0.00 0.00 45.71 3.97
3402 3705 2.583441 CCCTCTCACCACGCCTTCA 61.583 63.158 0.00 0.00 0.00 3.02
3417 3720 0.539051 CTTCAAGGCCGAGAGATGGT 59.461 55.000 0.00 0.00 0.00 3.55
3501 3804 1.282157 GCTGGTATGAAGTGGGGAACT 59.718 52.381 0.00 0.00 42.60 3.01
3511 3814 0.879090 GTGGGGAACTAGTTTTGCGG 59.121 55.000 10.02 0.00 0.00 5.69
3540 3843 9.929722 CGCTAGCAAGTTTATAAAATGTAATCA 57.070 29.630 16.45 0.00 0.00 2.57
3634 3960 5.731278 CATGAACTGTAACGTGATGCTATG 58.269 41.667 0.00 0.00 0.00 2.23
3677 4003 3.129287 GCCTGTTATGGATGTGAACCAAG 59.871 47.826 0.00 0.00 40.93 3.61
3692 4018 7.089538 TGTGAACCAAGTTAATGCAACATATG 58.910 34.615 0.00 0.00 39.81 1.78
3693 4019 7.090173 GTGAACCAAGTTAATGCAACATATGT 58.910 34.615 1.41 1.41 39.81 2.29
3694 4020 8.240682 GTGAACCAAGTTAATGCAACATATGTA 58.759 33.333 9.21 0.00 39.81 2.29
3695 4021 8.240682 TGAACCAAGTTAATGCAACATATGTAC 58.759 33.333 9.21 5.32 39.81 2.90
3696 4022 7.938140 ACCAAGTTAATGCAACATATGTACT 57.062 32.000 9.21 4.06 39.81 2.73
3697 4023 7.985476 ACCAAGTTAATGCAACATATGTACTC 58.015 34.615 9.21 2.07 39.81 2.59
3698 4024 7.067008 ACCAAGTTAATGCAACATATGTACTCC 59.933 37.037 9.21 0.00 39.81 3.85
3699 4025 7.417612 CAAGTTAATGCAACATATGTACTCCC 58.582 38.462 9.21 0.00 39.81 4.30
3700 4026 6.900194 AGTTAATGCAACATATGTACTCCCT 58.100 36.000 9.21 0.00 39.81 4.20
3701 4027 6.992715 AGTTAATGCAACATATGTACTCCCTC 59.007 38.462 9.21 0.00 39.81 4.30
3702 4028 3.838244 TGCAACATATGTACTCCCTCC 57.162 47.619 9.21 0.00 0.00 4.30
3703 4029 2.102420 TGCAACATATGTACTCCCTCCG 59.898 50.000 9.21 0.00 0.00 4.63
3704 4030 2.102588 GCAACATATGTACTCCCTCCGT 59.897 50.000 9.21 0.00 0.00 4.69
3705 4031 3.431766 GCAACATATGTACTCCCTCCGTT 60.432 47.826 9.21 0.00 0.00 4.44
3706 4032 4.369182 CAACATATGTACTCCCTCCGTTC 58.631 47.826 9.21 0.00 0.00 3.95
3707 4033 2.963782 ACATATGTACTCCCTCCGTTCC 59.036 50.000 6.56 0.00 0.00 3.62
3708 4034 2.832643 TATGTACTCCCTCCGTTCCA 57.167 50.000 0.00 0.00 0.00 3.53
3709 4035 1.946984 ATGTACTCCCTCCGTTCCAA 58.053 50.000 0.00 0.00 0.00 3.53
3710 4036 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
3711 4037 2.262637 TGTACTCCCTCCGTTCCAAAT 58.737 47.619 0.00 0.00 0.00 2.32
3712 4038 2.640826 TGTACTCCCTCCGTTCCAAATT 59.359 45.455 0.00 0.00 0.00 1.82
3713 4039 3.839490 TGTACTCCCTCCGTTCCAAATTA 59.161 43.478 0.00 0.00 0.00 1.40
3714 4040 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
3715 4041 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
3716 4042 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
3717 4043 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
3718 4044 3.073356 TCCCTCCGTTCCAAATTACTTGT 59.927 43.478 0.00 0.00 32.65 3.16
3719 4045 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
3720 4046 4.324267 CCTCCGTTCCAAATTACTTGTCT 58.676 43.478 0.00 0.00 32.65 3.41
3721 4047 4.392138 CCTCCGTTCCAAATTACTTGTCTC 59.608 45.833 0.00 0.00 32.65 3.36
3722 4048 3.991773 TCCGTTCCAAATTACTTGTCTCG 59.008 43.478 0.00 0.00 32.65 4.04
3723 4049 3.124636 CCGTTCCAAATTACTTGTCTCGG 59.875 47.826 0.00 0.00 35.08 4.63
3724 4050 3.991773 CGTTCCAAATTACTTGTCTCGGA 59.008 43.478 0.00 0.00 32.65 4.55
3725 4051 4.449743 CGTTCCAAATTACTTGTCTCGGAA 59.550 41.667 0.00 0.00 32.65 4.30
3726 4052 5.049954 CGTTCCAAATTACTTGTCTCGGAAA 60.050 40.000 0.00 0.00 32.65 3.13
3727 4053 6.348213 CGTTCCAAATTACTTGTCTCGGAAAT 60.348 38.462 0.00 0.00 32.65 2.17
3728 4054 6.494893 TCCAAATTACTTGTCTCGGAAATG 57.505 37.500 0.00 0.00 32.65 2.32
3729 4055 5.414454 TCCAAATTACTTGTCTCGGAAATGG 59.586 40.000 0.00 0.00 32.65 3.16
3730 4056 5.414454 CCAAATTACTTGTCTCGGAAATGGA 59.586 40.000 0.00 0.00 32.65 3.41
3731 4057 6.095440 CCAAATTACTTGTCTCGGAAATGGAT 59.905 38.462 0.00 0.00 32.65 3.41
3732 4058 6.683974 AATTACTTGTCTCGGAAATGGATG 57.316 37.500 0.00 0.00 0.00 3.51
3733 4059 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
3734 4060 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
3735 4061 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
3736 4062 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
3737 4063 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
3738 4064 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
3739 4065 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
3740 4066 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
3741 4067 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
3742 4068 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
3743 4069 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
3744 4070 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
3745 4071 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
3746 4072 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
3747 4073 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
3772 4098 8.709386 ATACATCTAGATACATCCATTTTCGC 57.291 34.615 4.54 0.00 0.00 4.70
3773 4099 5.635280 ACATCTAGATACATCCATTTTCGCG 59.365 40.000 4.54 0.00 0.00 5.87
3774 4100 5.447624 TCTAGATACATCCATTTTCGCGA 57.552 39.130 3.71 3.71 0.00 5.87
3775 4101 5.220381 TCTAGATACATCCATTTTCGCGAC 58.780 41.667 9.15 0.00 0.00 5.19
3776 4102 3.792401 AGATACATCCATTTTCGCGACA 58.208 40.909 9.15 0.00 0.00 4.35
3777 4103 4.188462 AGATACATCCATTTTCGCGACAA 58.812 39.130 9.15 9.93 0.00 3.18
3778 4104 2.900122 ACATCCATTTTCGCGACAAG 57.100 45.000 9.15 2.84 0.00 3.16
3779 4105 2.151202 ACATCCATTTTCGCGACAAGT 58.849 42.857 9.15 0.00 0.00 3.16
3780 4106 3.331150 ACATCCATTTTCGCGACAAGTA 58.669 40.909 9.15 0.00 0.00 2.24
3781 4107 3.749088 ACATCCATTTTCGCGACAAGTAA 59.251 39.130 9.15 0.00 0.00 2.24
3782 4108 4.394920 ACATCCATTTTCGCGACAAGTAAT 59.605 37.500 9.15 0.42 0.00 1.89
3783 4109 5.106317 ACATCCATTTTCGCGACAAGTAATT 60.106 36.000 9.15 0.00 0.00 1.40
3784 4110 4.965062 TCCATTTTCGCGACAAGTAATTC 58.035 39.130 9.15 0.00 0.00 2.17
3785 4111 4.095610 CCATTTTCGCGACAAGTAATTCC 58.904 43.478 9.15 0.00 0.00 3.01
3786 4112 3.443054 TTTTCGCGACAAGTAATTCCG 57.557 42.857 9.15 0.00 0.00 4.30
3787 4113 2.350899 TTCGCGACAAGTAATTCCGA 57.649 45.000 9.15 0.00 0.00 4.55
3788 4114 2.350899 TCGCGACAAGTAATTCCGAA 57.649 45.000 3.71 0.00 0.00 4.30
3789 4115 1.987770 TCGCGACAAGTAATTCCGAAC 59.012 47.619 3.71 0.00 0.00 3.95
3790 4116 1.266211 CGCGACAAGTAATTCCGAACG 60.266 52.381 0.00 0.00 0.00 3.95
3791 4117 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
3792 4118 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
3793 4119 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
3794 4120 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
3795 4121 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
3796 4122 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
3808 4134 4.672024 CGAACGGAGGGAGTATATCGATTG 60.672 50.000 1.71 0.00 0.00 2.67
3833 4209 1.202976 ACTTGATGTTGCTCTGGCCTT 60.203 47.619 3.32 0.00 37.74 4.35
3853 4229 5.067283 GCCTTCTGTAGGTGAAAACAAAAGA 59.933 40.000 2.16 0.00 46.61 2.52
3882 4258 1.086696 CCGGTATCAGCCAGTTGTTG 58.913 55.000 0.00 0.00 0.00 3.33
3894 4270 2.482721 CCAGTTGTTGGGTACGTTGATC 59.517 50.000 0.00 0.00 43.75 2.92
3899 4275 0.390603 TTGGGTACGTTGATCAGGCG 60.391 55.000 16.68 16.68 0.00 5.52
3905 4281 1.710013 ACGTTGATCAGGCGTGTAAG 58.290 50.000 21.17 0.56 37.47 2.34
3916 4293 1.781555 CGTGTAAGAGCGTGCAAGG 59.218 57.895 0.79 0.00 0.00 3.61
3935 4312 4.937201 AGGTGATGACATATCGCACTAA 57.063 40.909 5.32 0.00 34.72 2.24
4003 4433 2.732282 CGTGAAAGAGAGCAGCGATGTA 60.732 50.000 1.22 0.00 0.00 2.29
4008 4438 3.090952 AGAGAGCAGCGATGTAATGTC 57.909 47.619 1.22 0.00 0.00 3.06
4009 4439 2.428530 AGAGAGCAGCGATGTAATGTCA 59.571 45.455 1.22 0.00 0.00 3.58
4012 4442 1.009078 GCAGCGATGTAATGTCAGCA 58.991 50.000 1.22 0.00 0.00 4.41
4013 4443 1.267732 GCAGCGATGTAATGTCAGCAC 60.268 52.381 1.22 0.00 0.00 4.40
4014 4444 2.274437 CAGCGATGTAATGTCAGCACT 58.726 47.619 0.00 0.00 0.00 4.40
4016 4446 2.094026 AGCGATGTAATGTCAGCACTCA 60.094 45.455 0.00 0.00 0.00 3.41
4017 4447 2.283617 GCGATGTAATGTCAGCACTCAG 59.716 50.000 0.00 0.00 0.00 3.35
4018 4448 2.283617 CGATGTAATGTCAGCACTCAGC 59.716 50.000 0.00 0.00 46.19 4.26
4027 4457 3.576004 GCACTCAGCAGCAAGGAG 58.424 61.111 0.00 0.89 44.79 3.69
4028 4458 1.004080 GCACTCAGCAGCAAGGAGA 60.004 57.895 13.78 0.00 44.79 3.71
4029 4459 0.392729 GCACTCAGCAGCAAGGAGAT 60.393 55.000 13.78 0.00 44.79 2.75
4030 4460 1.134580 GCACTCAGCAGCAAGGAGATA 60.135 52.381 13.78 0.00 44.79 1.98
4031 4461 2.548875 CACTCAGCAGCAAGGAGATAC 58.451 52.381 13.78 0.00 33.00 2.24
4032 4462 1.135915 ACTCAGCAGCAAGGAGATACG 59.864 52.381 13.78 0.00 33.00 3.06
4033 4463 1.135915 CTCAGCAGCAAGGAGATACGT 59.864 52.381 0.00 0.00 0.00 3.57
4034 4464 2.359214 CTCAGCAGCAAGGAGATACGTA 59.641 50.000 0.00 0.00 0.00 3.57
4035 4465 2.359214 TCAGCAGCAAGGAGATACGTAG 59.641 50.000 0.08 0.00 0.00 3.51
4037 4467 2.761208 AGCAGCAAGGAGATACGTAGTT 59.239 45.455 0.08 0.00 37.78 2.24
4038 4468 3.195825 AGCAGCAAGGAGATACGTAGTTT 59.804 43.478 0.08 0.00 37.78 2.66
4039 4469 3.552294 GCAGCAAGGAGATACGTAGTTTC 59.448 47.826 0.08 0.00 37.78 2.78
4049 4479 6.092955 AGATACGTAGTTTCTTGGAACACA 57.907 37.500 0.08 0.00 46.13 3.72
4050 4480 6.698380 AGATACGTAGTTTCTTGGAACACAT 58.302 36.000 0.08 0.00 46.13 3.21
4051 4481 6.590292 AGATACGTAGTTTCTTGGAACACATG 59.410 38.462 0.08 0.00 46.13 3.21
4052 4482 4.699637 ACGTAGTTTCTTGGAACACATGA 58.300 39.130 0.00 0.00 37.78 3.07
4053 4483 5.120399 ACGTAGTTTCTTGGAACACATGAA 58.880 37.500 0.00 0.00 37.78 2.57
4054 4484 5.236478 ACGTAGTTTCTTGGAACACATGAAG 59.764 40.000 0.00 0.00 37.78 3.02
4055 4485 5.236478 CGTAGTTTCTTGGAACACATGAAGT 59.764 40.000 0.00 0.00 42.15 3.01
4056 4486 5.757850 AGTTTCTTGGAACACATGAAGTC 57.242 39.130 0.00 0.00 42.15 3.01
4057 4487 5.192927 AGTTTCTTGGAACACATGAAGTCA 58.807 37.500 0.00 0.00 42.15 3.41
4058 4488 5.829924 AGTTTCTTGGAACACATGAAGTCAT 59.170 36.000 0.00 0.00 42.15 3.06
4072 4502 7.048629 CATGAAGTCATGTAGATACCTCTGT 57.951 40.000 12.30 0.00 46.40 3.41
4073 4503 6.701145 TGAAGTCATGTAGATACCTCTGTC 57.299 41.667 0.00 0.00 32.66 3.51
4074 4504 5.594725 TGAAGTCATGTAGATACCTCTGTCC 59.405 44.000 0.00 0.00 32.66 4.02
4075 4505 5.130705 AGTCATGTAGATACCTCTGTCCA 57.869 43.478 0.00 0.00 32.66 4.02
4076 4506 5.710646 AGTCATGTAGATACCTCTGTCCAT 58.289 41.667 0.00 0.00 32.66 3.41
4077 4507 5.538053 AGTCATGTAGATACCTCTGTCCATG 59.462 44.000 0.00 0.00 36.16 3.66
4078 4508 4.835056 TCATGTAGATACCTCTGTCCATGG 59.165 45.833 4.97 4.97 35.87 3.66
4079 4509 4.265856 TGTAGATACCTCTGTCCATGGT 57.734 45.455 12.58 0.00 37.83 3.55
4080 4510 4.215908 TGTAGATACCTCTGTCCATGGTC 58.784 47.826 12.58 6.87 35.48 4.02
4081 4511 2.311463 AGATACCTCTGTCCATGGTCG 58.689 52.381 12.58 3.18 35.48 4.79
4082 4512 0.753262 ATACCTCTGTCCATGGTCGC 59.247 55.000 12.58 4.25 35.48 5.19
4083 4513 0.324368 TACCTCTGTCCATGGTCGCT 60.324 55.000 12.58 0.00 35.48 4.93
4084 4514 1.142748 CCTCTGTCCATGGTCGCTC 59.857 63.158 12.58 0.00 0.00 5.03
4085 4515 1.607801 CCTCTGTCCATGGTCGCTCA 61.608 60.000 12.58 4.20 0.00 4.26
4086 4516 0.459237 CTCTGTCCATGGTCGCTCAC 60.459 60.000 12.58 1.42 0.00 3.51
4087 4517 1.807165 CTGTCCATGGTCGCTCACG 60.807 63.158 12.58 0.00 42.01 4.35
4257 4699 2.614987 GCAGAAGAGCATCAGTTCACCT 60.615 50.000 0.00 0.00 37.82 4.00
4260 4702 3.326006 AGAAGAGCATCAGTTCACCTTCA 59.674 43.478 0.00 0.00 37.82 3.02
4287 4729 1.272490 TGGCACAGCACACTAGTACTC 59.728 52.381 0.00 0.00 0.00 2.59
4289 4731 1.546476 GCACAGCACACTAGTACTCCT 59.454 52.381 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.329545 TGAGTGTCAAGCCCGGCC 62.330 66.667 5.55 0.00 0.00 6.13
13 14 2.743928 CTGAGTGTCAAGCCCGGC 60.744 66.667 0.00 0.00 0.00 6.13
14 15 2.046892 CCTGAGTGTCAAGCCCGG 60.047 66.667 0.00 0.00 0.00 5.73
15 16 2.743928 GCCTGAGTGTCAAGCCCG 60.744 66.667 0.00 0.00 27.82 6.13
16 17 2.360475 GGCCTGAGTGTCAAGCCC 60.360 66.667 5.37 0.00 45.87 5.19
18 19 1.673665 CCTGGCCTGAGTGTCAAGC 60.674 63.158 11.88 0.00 33.23 4.01
19 20 1.673665 GCCTGGCCTGAGTGTCAAG 60.674 63.158 11.88 0.00 0.00 3.02
20 21 2.116983 GAGCCTGGCCTGAGTGTCAA 62.117 60.000 16.57 0.00 0.00 3.18
21 22 2.527624 AGCCTGGCCTGAGTGTCA 60.528 61.111 16.57 0.00 0.00 3.58
22 23 2.267324 GAGCCTGGCCTGAGTGTC 59.733 66.667 16.57 0.00 0.00 3.67
23 24 3.699894 CGAGCCTGGCCTGAGTGT 61.700 66.667 16.57 0.00 0.00 3.55
24 25 4.463879 CCGAGCCTGGCCTGAGTG 62.464 72.222 16.57 0.00 0.00 3.51
32 33 1.463553 AAAACAAAGCCCGAGCCTGG 61.464 55.000 0.00 0.00 41.25 4.45
33 34 0.318955 CAAAACAAAGCCCGAGCCTG 60.319 55.000 0.00 0.00 41.25 4.85
34 35 2.041153 CAAAACAAAGCCCGAGCCT 58.959 52.632 0.00 0.00 41.25 4.58
35 36 1.664649 GCAAAACAAAGCCCGAGCC 60.665 57.895 0.00 0.00 41.25 4.70
36 37 0.940991 CTGCAAAACAAAGCCCGAGC 60.941 55.000 0.00 0.00 40.32 5.03
37 38 0.940991 GCTGCAAAACAAAGCCCGAG 60.941 55.000 0.00 0.00 0.00 4.63
38 39 1.067250 GCTGCAAAACAAAGCCCGA 59.933 52.632 0.00 0.00 0.00 5.14
39 40 3.628958 GCTGCAAAACAAAGCCCG 58.371 55.556 0.00 0.00 0.00 6.13
42 43 0.529555 TTCGGGCTGCAAAACAAAGC 60.530 50.000 0.50 0.00 36.17 3.51
43 44 1.860326 CTTTCGGGCTGCAAAACAAAG 59.140 47.619 0.50 0.00 0.00 2.77
44 45 1.472376 CCTTTCGGGCTGCAAAACAAA 60.472 47.619 0.50 0.00 0.00 2.83
45 46 0.103937 CCTTTCGGGCTGCAAAACAA 59.896 50.000 0.50 0.00 0.00 2.83
46 47 1.040339 ACCTTTCGGGCTGCAAAACA 61.040 50.000 0.50 0.00 39.10 2.83
47 48 0.955905 TACCTTTCGGGCTGCAAAAC 59.044 50.000 0.50 0.00 39.10 2.43
48 49 1.243902 CTACCTTTCGGGCTGCAAAA 58.756 50.000 0.50 0.00 39.10 2.44
49 50 0.109723 ACTACCTTTCGGGCTGCAAA 59.890 50.000 0.50 0.00 39.10 3.68
50 51 0.109723 AACTACCTTTCGGGCTGCAA 59.890 50.000 0.50 0.00 39.10 4.08
51 52 0.321298 GAACTACCTTTCGGGCTGCA 60.321 55.000 0.50 0.00 39.10 4.41
52 53 1.359459 CGAACTACCTTTCGGGCTGC 61.359 60.000 0.00 0.00 43.79 5.25
53 54 2.750815 CGAACTACCTTTCGGGCTG 58.249 57.895 0.00 0.00 43.79 4.85
58 59 1.808390 CGGCCCGAACTACCTTTCG 60.808 63.158 0.00 0.00 46.46 3.46
59 60 1.449070 CCGGCCCGAACTACCTTTC 60.449 63.158 3.71 0.00 0.00 2.62
60 61 2.666812 CCGGCCCGAACTACCTTT 59.333 61.111 3.71 0.00 0.00 3.11
61 62 3.396570 CCCGGCCCGAACTACCTT 61.397 66.667 3.71 0.00 0.00 3.50
64 65 4.525949 GAGCCCGGCCCGAACTAC 62.526 72.222 3.71 0.00 0.00 2.73
75 76 2.804828 AAAAGAGAAGCCCGAGCCCG 62.805 60.000 0.00 0.00 41.25 6.13
76 77 0.609406 AAAAAGAGAAGCCCGAGCCC 60.609 55.000 0.00 0.00 41.25 5.19
77 78 0.805614 GAAAAAGAGAAGCCCGAGCC 59.194 55.000 0.00 0.00 41.25 4.70
78 79 1.814793 AGAAAAAGAGAAGCCCGAGC 58.185 50.000 0.00 0.00 40.32 5.03
79 80 6.502136 AAAATAGAAAAAGAGAAGCCCGAG 57.498 37.500 0.00 0.00 0.00 4.63
80 81 6.894339 AAAAATAGAAAAAGAGAAGCCCGA 57.106 33.333 0.00 0.00 0.00 5.14
100 101 2.910345 CGAAAGCCCGGCCGAAAAA 61.910 57.895 30.73 0.00 0.00 1.94
101 102 3.358707 CGAAAGCCCGGCCGAAAA 61.359 61.111 30.73 0.00 0.00 2.29
110 111 4.056125 GTGCAAGCCCGAAAGCCC 62.056 66.667 0.00 0.00 0.00 5.19
111 112 4.404654 CGTGCAAGCCCGAAAGCC 62.405 66.667 0.00 0.00 0.00 4.35
112 113 2.322081 TACGTGCAAGCCCGAAAGC 61.322 57.895 3.55 0.00 0.00 3.51
113 114 1.225376 TGTACGTGCAAGCCCGAAAG 61.225 55.000 3.02 0.00 0.00 2.62
114 115 1.225376 CTGTACGTGCAAGCCCGAAA 61.225 55.000 7.96 0.00 0.00 3.46
115 116 1.666553 CTGTACGTGCAAGCCCGAA 60.667 57.895 7.96 0.00 0.00 4.30
116 117 1.525718 TACTGTACGTGCAAGCCCGA 61.526 55.000 7.96 0.00 0.00 5.14
117 118 1.080366 TACTGTACGTGCAAGCCCG 60.080 57.895 7.96 0.00 0.00 6.13
118 119 0.037605 AGTACTGTACGTGCAAGCCC 60.038 55.000 7.96 0.00 0.00 5.19
119 120 2.642139 TAGTACTGTACGTGCAAGCC 57.358 50.000 7.96 0.00 0.00 4.35
120 121 4.977741 TTTTAGTACTGTACGTGCAAGC 57.022 40.909 7.96 0.91 0.00 4.01
141 142 3.666253 CCGGCCCGAACGCTTTTT 61.666 61.111 3.71 0.00 0.00 1.94
160 161 2.359975 AAGCCCGAAGCCCGAAAG 60.360 61.111 0.00 0.00 45.47 2.62
161 162 2.478335 ATCAAGCCCGAAGCCCGAAA 62.478 55.000 0.00 0.00 45.47 3.46
162 163 2.478335 AATCAAGCCCGAAGCCCGAA 62.478 55.000 0.00 0.00 45.47 4.30
163 164 2.478335 AAATCAAGCCCGAAGCCCGA 62.478 55.000 0.00 0.00 45.47 5.14
164 165 1.595093 AAAATCAAGCCCGAAGCCCG 61.595 55.000 0.00 0.00 45.47 6.13
165 166 0.108662 CAAAATCAAGCCCGAAGCCC 60.109 55.000 0.00 0.00 45.47 5.19
166 167 0.108662 CCAAAATCAAGCCCGAAGCC 60.109 55.000 0.00 0.00 45.47 4.35
167 168 0.887933 TCCAAAATCAAGCCCGAAGC 59.112 50.000 0.00 0.00 44.25 3.86
168 169 1.202348 GGTCCAAAATCAAGCCCGAAG 59.798 52.381 0.00 0.00 0.00 3.79
169 170 1.253100 GGTCCAAAATCAAGCCCGAA 58.747 50.000 0.00 0.00 0.00 4.30
170 171 0.958382 CGGTCCAAAATCAAGCCCGA 60.958 55.000 0.00 0.00 36.12 5.14
171 172 1.506262 CGGTCCAAAATCAAGCCCG 59.494 57.895 0.00 0.00 0.00 6.13
172 173 1.604147 CCCGGTCCAAAATCAAGCCC 61.604 60.000 0.00 0.00 0.00 5.19
173 174 1.890174 CCCGGTCCAAAATCAAGCC 59.110 57.895 0.00 0.00 0.00 4.35
174 175 1.215382 GCCCGGTCCAAAATCAAGC 59.785 57.895 0.00 0.00 0.00 4.01
175 176 0.811281 GAGCCCGGTCCAAAATCAAG 59.189 55.000 0.00 0.00 0.00 3.02
176 177 0.958382 CGAGCCCGGTCCAAAATCAA 60.958 55.000 0.00 0.00 0.00 2.57
177 178 1.376683 CGAGCCCGGTCCAAAATCA 60.377 57.895 0.00 0.00 0.00 2.57
178 179 3.497879 CGAGCCCGGTCCAAAATC 58.502 61.111 0.00 0.00 0.00 2.17
188 189 2.438434 ATTTCAAGCCCGAGCCCG 60.438 61.111 0.00 0.00 41.25 6.13
189 190 0.965363 TTGATTTCAAGCCCGAGCCC 60.965 55.000 0.00 0.00 41.25 5.19
190 191 0.453390 CTTGATTTCAAGCCCGAGCC 59.547 55.000 7.34 0.00 45.59 4.70
199 200 6.248433 AGCCAGAAATACTCCTTGATTTCAA 58.752 36.000 9.35 0.00 42.18 2.69
200 201 5.819991 AGCCAGAAATACTCCTTGATTTCA 58.180 37.500 9.35 0.00 42.18 2.69
201 202 6.457528 CGAAGCCAGAAATACTCCTTGATTTC 60.458 42.308 0.00 0.00 40.74 2.17
202 203 5.355350 CGAAGCCAGAAATACTCCTTGATTT 59.645 40.000 0.00 0.00 0.00 2.17
203 204 4.878397 CGAAGCCAGAAATACTCCTTGATT 59.122 41.667 0.00 0.00 0.00 2.57
204 205 4.446371 CGAAGCCAGAAATACTCCTTGAT 58.554 43.478 0.00 0.00 0.00 2.57
205 206 3.369471 CCGAAGCCAGAAATACTCCTTGA 60.369 47.826 0.00 0.00 0.00 3.02
206 207 2.939103 CCGAAGCCAGAAATACTCCTTG 59.061 50.000 0.00 0.00 0.00 3.61
207 208 2.092914 CCCGAAGCCAGAAATACTCCTT 60.093 50.000 0.00 0.00 0.00 3.36
208 209 1.486726 CCCGAAGCCAGAAATACTCCT 59.513 52.381 0.00 0.00 0.00 3.69
209 210 1.954927 CCCGAAGCCAGAAATACTCC 58.045 55.000 0.00 0.00 0.00 3.85
210 211 1.134371 AGCCCGAAGCCAGAAATACTC 60.134 52.381 0.00 0.00 45.47 2.59
211 212 0.912486 AGCCCGAAGCCAGAAATACT 59.088 50.000 0.00 0.00 45.47 2.12
212 213 1.751437 AAGCCCGAAGCCAGAAATAC 58.249 50.000 0.00 0.00 45.47 1.89
213 214 3.199071 TCTTAAGCCCGAAGCCAGAAATA 59.801 43.478 0.00 0.00 45.47 1.40
214 215 2.026262 TCTTAAGCCCGAAGCCAGAAAT 60.026 45.455 0.00 0.00 45.47 2.17
215 216 1.349688 TCTTAAGCCCGAAGCCAGAAA 59.650 47.619 0.00 0.00 45.47 2.52
216 217 0.981183 TCTTAAGCCCGAAGCCAGAA 59.019 50.000 0.00 0.00 45.47 3.02
217 218 0.981183 TTCTTAAGCCCGAAGCCAGA 59.019 50.000 0.00 0.00 45.47 3.86
218 219 1.821216 TTTCTTAAGCCCGAAGCCAG 58.179 50.000 0.00 0.00 45.47 4.85
219 220 2.091541 CATTTCTTAAGCCCGAAGCCA 58.908 47.619 0.00 0.00 45.47 4.75
220 221 2.365582 TCATTTCTTAAGCCCGAAGCC 58.634 47.619 0.00 0.00 45.47 4.35
221 222 3.440522 ACTTCATTTCTTAAGCCCGAAGC 59.559 43.478 16.84 0.00 44.25 3.86
222 223 5.629079 AACTTCATTTCTTAAGCCCGAAG 57.371 39.130 15.97 15.97 35.61 3.79
223 224 4.153475 CGAACTTCATTTCTTAAGCCCGAA 59.847 41.667 0.00 0.00 0.00 4.30
224 225 3.682858 CGAACTTCATTTCTTAAGCCCGA 59.317 43.478 0.00 0.00 0.00 5.14
225 226 3.181510 CCGAACTTCATTTCTTAAGCCCG 60.182 47.826 0.00 0.00 0.00 6.13
226 227 3.128764 CCCGAACTTCATTTCTTAAGCCC 59.871 47.826 0.00 0.00 0.00 5.19
227 228 3.756963 ACCCGAACTTCATTTCTTAAGCC 59.243 43.478 0.00 0.00 0.00 4.35
228 229 5.372547 AACCCGAACTTCATTTCTTAAGC 57.627 39.130 0.00 0.00 0.00 3.09
229 230 6.143919 GCAAAACCCGAACTTCATTTCTTAAG 59.856 38.462 0.00 0.00 0.00 1.85
230 231 5.980715 GCAAAACCCGAACTTCATTTCTTAA 59.019 36.000 0.00 0.00 0.00 1.85
231 232 5.067936 TGCAAAACCCGAACTTCATTTCTTA 59.932 36.000 0.00 0.00 0.00 2.10
232 233 4.142049 TGCAAAACCCGAACTTCATTTCTT 60.142 37.500 0.00 0.00 0.00 2.52
233 234 3.383185 TGCAAAACCCGAACTTCATTTCT 59.617 39.130 0.00 0.00 0.00 2.52
234 235 3.712187 TGCAAAACCCGAACTTCATTTC 58.288 40.909 0.00 0.00 0.00 2.17
235 236 3.810310 TGCAAAACCCGAACTTCATTT 57.190 38.095 0.00 0.00 0.00 2.32
236 237 3.716601 CTTGCAAAACCCGAACTTCATT 58.283 40.909 0.00 0.00 0.00 2.57
237 238 2.545742 GCTTGCAAAACCCGAACTTCAT 60.546 45.455 0.00 0.00 0.00 2.57
238 239 1.202359 GCTTGCAAAACCCGAACTTCA 60.202 47.619 0.00 0.00 0.00 3.02
239 240 1.487482 GCTTGCAAAACCCGAACTTC 58.513 50.000 0.00 0.00 0.00 3.01
240 241 0.104120 GGCTTGCAAAACCCGAACTT 59.896 50.000 0.00 0.00 0.00 2.66
241 242 1.739667 GGCTTGCAAAACCCGAACT 59.260 52.632 0.00 0.00 0.00 3.01
242 243 1.300620 GGGCTTGCAAAACCCGAAC 60.301 57.895 18.78 0.08 32.92 3.95
243 244 3.133946 GGGCTTGCAAAACCCGAA 58.866 55.556 18.78 0.00 32.92 4.30
246 247 4.680237 GCCGGGCTTGCAAAACCC 62.680 66.667 22.16 22.16 40.51 4.11
247 248 4.680237 GGCCGGGCTTGCAAAACC 62.680 66.667 22.87 9.26 0.00 3.27
248 249 3.615709 AGGCCGGGCTTGCAAAAC 61.616 61.111 27.45 0.00 0.00 2.43
249 250 3.614698 CAGGCCGGGCTTGCAAAA 61.615 61.111 30.73 0.00 0.00 2.44
250 251 4.594854 TCAGGCCGGGCTTGCAAA 62.595 61.111 30.73 8.78 35.58 3.68
251 252 4.594854 TTCAGGCCGGGCTTGCAA 62.595 61.111 30.73 18.28 35.58 4.08
252 253 4.594854 TTTCAGGCCGGGCTTGCA 62.595 61.111 30.73 13.04 35.58 4.08
253 254 4.056125 GTTTCAGGCCGGGCTTGC 62.056 66.667 30.73 14.59 35.58 4.01
254 255 3.373565 GGTTTCAGGCCGGGCTTG 61.374 66.667 30.73 23.89 36.97 4.01
255 256 4.678743 GGGTTTCAGGCCGGGCTT 62.679 66.667 30.73 8.82 0.00 4.35
602 603 2.445682 AACCCTGTACACAGCCAAAA 57.554 45.000 3.75 0.00 42.47 2.44
603 604 2.445682 AAACCCTGTACACAGCCAAA 57.554 45.000 3.75 0.00 42.47 3.28
604 605 2.092103 AGAAAACCCTGTACACAGCCAA 60.092 45.455 3.75 0.00 42.47 4.52
605 606 1.493022 AGAAAACCCTGTACACAGCCA 59.507 47.619 3.75 0.00 42.47 4.75
606 607 2.271944 AGAAAACCCTGTACACAGCC 57.728 50.000 3.75 0.00 42.47 4.85
607 608 2.742589 GCTAGAAAACCCTGTACACAGC 59.257 50.000 3.75 0.00 42.47 4.40
608 609 4.002906 TGCTAGAAAACCCTGTACACAG 57.997 45.455 2.23 2.23 43.40 3.66
609 610 4.385825 CTTGCTAGAAAACCCTGTACACA 58.614 43.478 0.00 0.00 0.00 3.72
610 611 3.188667 GCTTGCTAGAAAACCCTGTACAC 59.811 47.826 0.00 0.00 0.00 2.90
611 612 3.408634 GCTTGCTAGAAAACCCTGTACA 58.591 45.455 0.00 0.00 0.00 2.90
612 613 2.415512 CGCTTGCTAGAAAACCCTGTAC 59.584 50.000 0.00 0.00 0.00 2.90
613 614 2.695359 CGCTTGCTAGAAAACCCTGTA 58.305 47.619 0.00 0.00 0.00 2.74
614 615 1.523758 CGCTTGCTAGAAAACCCTGT 58.476 50.000 0.00 0.00 0.00 4.00
615 616 0.169009 GCGCTTGCTAGAAAACCCTG 59.831 55.000 0.00 0.00 35.07 4.45
616 617 2.556286 GCGCTTGCTAGAAAACCCT 58.444 52.632 0.00 0.00 35.07 4.34
627 628 4.035675 AGTGATTTCCTATTTAGCGCTTGC 59.964 41.667 18.68 0.00 39.58 4.01
648 649 2.650608 GCAAATCGTTTTCTTGCGAGT 58.349 42.857 0.00 0.00 40.56 4.18
657 658 2.359531 TCAACCGGAAGCAAATCGTTTT 59.640 40.909 9.46 0.00 0.00 2.43
664 665 0.387565 GCCTTTCAACCGGAAGCAAA 59.612 50.000 9.46 0.12 36.72 3.68
665 666 1.460273 GGCCTTTCAACCGGAAGCAA 61.460 55.000 9.46 0.00 36.72 3.91
675 676 1.412343 GGAACAAAGCTGGCCTTTCAA 59.588 47.619 3.32 0.00 41.75 2.69
697 698 2.585247 GATGTCGCCCGGTAGTGC 60.585 66.667 0.00 0.00 0.00 4.40
701 702 3.845259 GCCTGATGTCGCCCGGTA 61.845 66.667 0.00 0.00 0.00 4.02
746 747 2.875933 CAGAAAACTGGTTAGTTCGGCA 59.124 45.455 0.00 0.00 46.14 5.69
758 759 4.597051 GGGAACCGACAGTCAGAAAACTG 61.597 52.174 0.41 2.62 45.99 3.16
759 760 2.484947 GGGAACCGACAGTCAGAAAACT 60.485 50.000 0.41 0.00 40.86 2.66
828 829 2.373224 GGAAAGAGGGATGGAAAGCAG 58.627 52.381 0.00 0.00 0.00 4.24
953 956 3.626924 CGCTCGGGGATTAGGGGG 61.627 72.222 0.00 0.00 0.00 5.40
1258 1262 4.570663 AGCGGCGCATACCTCGAC 62.571 66.667 35.02 0.00 0.00 4.20
1289 1293 2.970639 CGGCAGGAGTCGGAGAAA 59.029 61.111 0.00 0.00 39.69 2.52
1329 1348 0.392998 AGCCGGAAATCAGCACGAAT 60.393 50.000 5.05 0.00 0.00 3.34
1474 1493 6.995686 TCTCAGTACTGATAGTCTTCTCCATC 59.004 42.308 25.35 0.00 39.13 3.51
1601 1620 1.889829 GCCGTATATCCAGAGCAGAGT 59.110 52.381 0.00 0.00 0.00 3.24
1644 1668 3.931907 TCGTGATCCTCCATTGGATTT 57.068 42.857 5.70 0.00 46.00 2.17
1714 1747 8.589338 TGGCCTAAAGCAACATTTCTTTAATTA 58.411 29.630 3.32 0.00 46.50 1.40
1717 1750 6.412362 TGGCCTAAAGCAACATTTCTTTAA 57.588 33.333 3.32 0.00 46.50 1.52
1766 1799 6.867519 TGTAATACAGGAATCAGAAGGTCA 57.132 37.500 0.00 0.00 0.00 4.02
1803 1836 3.872459 ATTCTAAGCTAGCCTGGCAAT 57.128 42.857 22.65 6.12 0.00 3.56
1810 1843 4.513318 CAGGCAAACTATTCTAAGCTAGCC 59.487 45.833 12.13 0.00 38.65 3.93
1857 1890 7.293828 TGGGACCAATGCAGATAATTACATTA 58.706 34.615 0.00 0.00 31.75 1.90
1861 1894 6.655078 ATTGGGACCAATGCAGATAATTAC 57.345 37.500 15.41 0.00 44.05 1.89
2108 2370 4.851843 TGAGTGACTCTACCGAATAAGGA 58.148 43.478 14.42 0.00 34.73 3.36
2109 2371 5.578005 TTGAGTGACTCTACCGAATAAGG 57.422 43.478 14.42 0.00 37.30 2.69
2113 2375 3.430929 GGCATTGAGTGACTCTACCGAAT 60.431 47.826 14.42 1.81 31.05 3.34
2251 2514 1.273606 CGACCTCTGTCACATTGTCCT 59.726 52.381 0.00 0.00 41.85 3.85
2307 2570 5.954150 AGGAACGGGAGTAGATAACAAGTTA 59.046 40.000 0.00 0.00 46.69 2.24
2308 2571 4.776308 AGGAACGGGAGTAGATAACAAGTT 59.224 41.667 0.00 0.00 46.69 2.66
2337 2601 9.655769 CCTGAAATATCGATGAAACTACAAATG 57.344 33.333 8.54 0.00 0.00 2.32
2345 2609 5.294306 TCAGTGCCTGAAATATCGATGAAAC 59.706 40.000 8.54 0.00 37.57 2.78
2389 2653 7.306632 CGCTTTATCTTGTATTTAGGGTTCTCG 60.307 40.741 0.00 0.00 0.00 4.04
2405 2669 3.081061 TCAATGGTGCACGCTTTATCTT 58.919 40.909 11.45 0.00 0.00 2.40
2406 2670 2.420022 GTCAATGGTGCACGCTTTATCT 59.580 45.455 11.45 0.00 0.00 1.98
2459 2723 0.182299 AGCTTCTCCATAAGGCCAGC 59.818 55.000 5.01 0.72 33.50 4.85
2544 2808 9.525409 CAATGGCTTGGAAAAGATAATCTAAAG 57.475 33.333 0.00 0.00 0.00 1.85
2570 2834 7.092716 AGAAAATCATAATCAGGCAACACAAC 58.907 34.615 0.00 0.00 41.41 3.32
2571 2835 7.230849 AGAAAATCATAATCAGGCAACACAA 57.769 32.000 0.00 0.00 41.41 3.33
2677 2947 3.445096 AGCATAAACCATTCACCAGCTTC 59.555 43.478 0.00 0.00 0.00 3.86
2678 2948 3.434309 AGCATAAACCATTCACCAGCTT 58.566 40.909 0.00 0.00 0.00 3.74
2712 2983 6.407074 GGGCAAGCTTCTCAGTAATAGAACTA 60.407 42.308 0.00 0.00 0.00 2.24
2738 3014 4.710324 TGAACGGTACAAAAGGAGACAAT 58.290 39.130 0.00 0.00 0.00 2.71
2781 3057 6.275494 AGAGAAACAGCCTAAGTAGACTTC 57.725 41.667 0.00 0.00 37.40 3.01
2794 3096 4.333926 AGTGTCACAAAGAAGAGAAACAGC 59.666 41.667 5.62 0.00 0.00 4.40
2795 3097 5.582269 TCAGTGTCACAAAGAAGAGAAACAG 59.418 40.000 5.62 0.00 0.00 3.16
2796 3098 5.487433 TCAGTGTCACAAAGAAGAGAAACA 58.513 37.500 5.62 0.00 0.00 2.83
2797 3099 6.425504 CATCAGTGTCACAAAGAAGAGAAAC 58.574 40.000 5.62 0.00 0.00 2.78
2798 3100 5.008019 GCATCAGTGTCACAAAGAAGAGAAA 59.992 40.000 5.62 0.00 0.00 2.52
2799 3101 4.512944 GCATCAGTGTCACAAAGAAGAGAA 59.487 41.667 5.62 0.00 0.00 2.87
2800 3102 4.060900 GCATCAGTGTCACAAAGAAGAGA 58.939 43.478 5.62 0.00 0.00 3.10
2801 3103 3.811497 TGCATCAGTGTCACAAAGAAGAG 59.189 43.478 5.62 0.00 0.00 2.85
2802 3104 3.807553 TGCATCAGTGTCACAAAGAAGA 58.192 40.909 5.62 0.00 0.00 2.87
2803 3105 3.562973 ACTGCATCAGTGTCACAAAGAAG 59.437 43.478 5.62 0.00 43.63 2.85
2804 3106 3.544684 ACTGCATCAGTGTCACAAAGAA 58.455 40.909 5.62 0.00 43.63 2.52
2805 3107 3.198409 ACTGCATCAGTGTCACAAAGA 57.802 42.857 5.62 0.54 43.63 2.52
2806 3108 3.976793 AACTGCATCAGTGTCACAAAG 57.023 42.857 5.62 0.00 44.62 2.77
2807 3109 5.764686 AGAATAACTGCATCAGTGTCACAAA 59.235 36.000 5.62 0.00 44.62 2.83
2808 3110 5.308014 AGAATAACTGCATCAGTGTCACAA 58.692 37.500 5.62 0.00 44.62 3.33
2809 3111 4.898320 AGAATAACTGCATCAGTGTCACA 58.102 39.130 5.62 0.00 44.62 3.58
2810 3112 4.331168 GGAGAATAACTGCATCAGTGTCAC 59.669 45.833 0.00 0.00 44.62 3.67
2811 3113 4.020307 TGGAGAATAACTGCATCAGTGTCA 60.020 41.667 0.00 0.00 44.62 3.58
2812 3114 4.507710 TGGAGAATAACTGCATCAGTGTC 58.492 43.478 0.00 0.00 44.62 3.67
2830 3132 9.123902 TGACATGAAGATATAATGGTTTTGGAG 57.876 33.333 0.00 0.00 0.00 3.86
2837 3139 9.631257 TGAAACATGACATGAAGATATAATGGT 57.369 29.630 22.19 0.00 0.00 3.55
2838 3140 9.888878 GTGAAACATGACATGAAGATATAATGG 57.111 33.333 22.19 0.00 36.32 3.16
2842 3144 7.805163 AGGGTGAAACATGACATGAAGATATA 58.195 34.615 22.19 0.00 39.98 0.86
2894 3196 8.210265 TCTCACATACCTGCAATATGTTATTCA 58.790 33.333 16.87 2.41 40.51 2.57
2925 3228 1.863454 CACGAGTGCAGAATAGATGGC 59.137 52.381 0.00 0.00 0.00 4.40
2932 3235 2.297315 TCTCTTCACACGAGTGCAGAAT 59.703 45.455 15.06 0.00 45.18 2.40
3111 3414 1.202976 AGGCTCTGTTTCTGCATGGTT 60.203 47.619 0.00 0.00 0.00 3.67
3285 3588 1.197430 ACTCCTCTTGGCTGAGTGGG 61.197 60.000 8.83 3.63 37.92 4.61
3288 3591 0.835543 AGCACTCCTCTTGGCTGAGT 60.836 55.000 7.17 0.00 39.86 3.41
3402 3705 0.394565 GCATACCATCTCTCGGCCTT 59.605 55.000 0.00 0.00 0.00 4.35
3540 3843 3.799366 TCACATTCACACAACGTAACCT 58.201 40.909 0.00 0.00 0.00 3.50
3547 3850 4.097714 CACACAGTTCACATTCACACAAC 58.902 43.478 0.00 0.00 0.00 3.32
3634 3960 2.537401 GCATACTCAAGACCGTACCAC 58.463 52.381 0.00 0.00 0.00 4.16
3677 4003 6.204882 GGAGGGAGTACATATGTTGCATTAAC 59.795 42.308 14.77 4.09 39.80 2.01
3692 4018 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
3693 4019 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
3694 4020 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
3695 4021 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
3696 4022 3.073356 ACAAGTAATTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 41.25 4.20
3697 4023 3.418047 ACAAGTAATTTGGAACGGAGGG 58.582 45.455 0.00 0.00 41.25 4.30
3698 4024 4.324267 AGACAAGTAATTTGGAACGGAGG 58.676 43.478 0.00 0.00 41.25 4.30
3699 4025 4.091509 CGAGACAAGTAATTTGGAACGGAG 59.908 45.833 0.00 0.00 41.25 4.63
3700 4026 3.991773 CGAGACAAGTAATTTGGAACGGA 59.008 43.478 0.00 0.00 41.25 4.69
3701 4027 3.124636 CCGAGACAAGTAATTTGGAACGG 59.875 47.826 0.00 0.00 41.25 4.44
3702 4028 3.991773 TCCGAGACAAGTAATTTGGAACG 59.008 43.478 0.00 0.00 41.25 3.95
3703 4029 5.934935 TTCCGAGACAAGTAATTTGGAAC 57.065 39.130 0.00 0.00 41.25 3.62
3704 4030 6.072175 CCATTTCCGAGACAAGTAATTTGGAA 60.072 38.462 0.00 0.00 41.25 3.53
3705 4031 5.414454 CCATTTCCGAGACAAGTAATTTGGA 59.586 40.000 0.00 0.00 41.25 3.53
3706 4032 5.414454 TCCATTTCCGAGACAAGTAATTTGG 59.586 40.000 0.00 0.00 41.25 3.28
3707 4033 6.494893 TCCATTTCCGAGACAAGTAATTTG 57.505 37.500 0.00 0.00 42.68 2.32
3708 4034 6.659242 ACATCCATTTCCGAGACAAGTAATTT 59.341 34.615 0.00 0.00 0.00 1.82
3709 4035 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
3710 4036 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
3711 4037 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
3712 4038 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
3713 4039 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
3714 4040 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
3715 4041 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
3716 4042 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
3717 4043 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
3718 4044 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
3719 4045 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
3720 4046 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
3721 4047 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
3746 4072 9.155975 GCGAAAATGGATGTATCTAGATGTATT 57.844 33.333 15.79 4.32 0.00 1.89
3747 4073 7.489435 CGCGAAAATGGATGTATCTAGATGTAT 59.511 37.037 15.79 9.11 0.00 2.29
3748 4074 6.806739 CGCGAAAATGGATGTATCTAGATGTA 59.193 38.462 15.79 4.44 0.00 2.29
3749 4075 5.635280 CGCGAAAATGGATGTATCTAGATGT 59.365 40.000 15.79 1.25 0.00 3.06
3750 4076 5.863935 TCGCGAAAATGGATGTATCTAGATG 59.136 40.000 15.79 0.00 0.00 2.90
3751 4077 5.864474 GTCGCGAAAATGGATGTATCTAGAT 59.136 40.000 12.06 10.73 0.00 1.98
3752 4078 5.220381 GTCGCGAAAATGGATGTATCTAGA 58.780 41.667 12.06 0.00 0.00 2.43
3753 4079 4.982295 TGTCGCGAAAATGGATGTATCTAG 59.018 41.667 12.06 0.00 0.00 2.43
3754 4080 4.939271 TGTCGCGAAAATGGATGTATCTA 58.061 39.130 12.06 0.00 0.00 1.98
3755 4081 3.792401 TGTCGCGAAAATGGATGTATCT 58.208 40.909 12.06 0.00 0.00 1.98
3756 4082 4.034048 ACTTGTCGCGAAAATGGATGTATC 59.966 41.667 13.05 0.00 0.00 2.24
3757 4083 3.938963 ACTTGTCGCGAAAATGGATGTAT 59.061 39.130 13.05 0.00 0.00 2.29
3758 4084 3.331150 ACTTGTCGCGAAAATGGATGTA 58.669 40.909 13.05 0.00 0.00 2.29
3759 4085 2.151202 ACTTGTCGCGAAAATGGATGT 58.849 42.857 13.05 3.46 0.00 3.06
3760 4086 2.900122 ACTTGTCGCGAAAATGGATG 57.100 45.000 13.05 2.76 0.00 3.51
3761 4087 5.448632 GGAATTACTTGTCGCGAAAATGGAT 60.449 40.000 13.05 3.91 0.00 3.41
3762 4088 4.142773 GGAATTACTTGTCGCGAAAATGGA 60.143 41.667 13.05 0.56 0.00 3.41
3763 4089 4.095610 GGAATTACTTGTCGCGAAAATGG 58.904 43.478 13.05 4.35 0.00 3.16
3764 4090 3.778718 CGGAATTACTTGTCGCGAAAATG 59.221 43.478 13.05 9.32 0.00 2.32
3765 4091 3.680937 TCGGAATTACTTGTCGCGAAAAT 59.319 39.130 13.05 5.74 0.00 1.82
3766 4092 3.058450 TCGGAATTACTTGTCGCGAAAA 58.942 40.909 12.06 12.01 0.00 2.29
3767 4093 2.674954 TCGGAATTACTTGTCGCGAAA 58.325 42.857 12.06 0.54 0.00 3.46
3768 4094 2.350899 TCGGAATTACTTGTCGCGAA 57.649 45.000 12.06 0.00 0.00 4.70
3769 4095 1.987770 GTTCGGAATTACTTGTCGCGA 59.012 47.619 3.71 3.71 0.00 5.87
3770 4096 1.266211 CGTTCGGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 0.00 5.87
3771 4097 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
3772 4098 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
3773 4099 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
3774 4100 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
3775 4101 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
3776 4102 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
3777 4103 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
3778 4104 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
3779 4105 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
3780 4106 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
3781 4107 2.083628 ATACTCCCTCCGTTCGGAAT 57.916 50.000 14.79 2.14 33.41 3.01
3782 4108 2.734755 TATACTCCCTCCGTTCGGAA 57.265 50.000 14.79 0.00 33.41 4.30
3783 4109 2.787994 GATATACTCCCTCCGTTCGGA 58.212 52.381 13.34 13.34 0.00 4.55
3784 4110 1.467734 CGATATACTCCCTCCGTTCGG 59.532 57.143 4.74 4.74 0.00 4.30
3785 4111 2.420642 TCGATATACTCCCTCCGTTCG 58.579 52.381 0.00 0.00 0.00 3.95
3786 4112 4.217983 ACAATCGATATACTCCCTCCGTTC 59.782 45.833 0.00 0.00 0.00 3.95
3787 4113 4.022242 CACAATCGATATACTCCCTCCGTT 60.022 45.833 0.00 0.00 0.00 4.44
3788 4114 3.506455 CACAATCGATATACTCCCTCCGT 59.494 47.826 0.00 0.00 0.00 4.69
3789 4115 3.673594 GCACAATCGATATACTCCCTCCG 60.674 52.174 0.00 0.00 0.00 4.63
3790 4116 3.258372 TGCACAATCGATATACTCCCTCC 59.742 47.826 0.00 0.00 0.00 4.30
3791 4117 4.521130 TGCACAATCGATATACTCCCTC 57.479 45.455 0.00 0.00 0.00 4.30
3792 4118 4.345257 AGTTGCACAATCGATATACTCCCT 59.655 41.667 0.00 0.00 0.00 4.20
3793 4119 4.632153 AGTTGCACAATCGATATACTCCC 58.368 43.478 0.00 0.00 0.00 4.30
3794 4120 5.753438 TCAAGTTGCACAATCGATATACTCC 59.247 40.000 0.00 0.00 0.00 3.85
3795 4121 6.828502 TCAAGTTGCACAATCGATATACTC 57.171 37.500 0.00 0.00 0.00 2.59
3796 4122 6.763135 ACATCAAGTTGCACAATCGATATACT 59.237 34.615 0.00 0.00 0.00 2.12
3833 4209 6.411376 TCTGTCTTTTGTTTTCACCTACAGA 58.589 36.000 0.00 0.00 38.68 3.41
3882 4258 1.082117 CACGCCTGATCAACGTACCC 61.082 60.000 19.54 0.00 38.09 3.69
3886 4262 1.271379 TCTTACACGCCTGATCAACGT 59.729 47.619 15.58 15.58 41.45 3.99
3894 4270 2.730672 GCACGCTCTTACACGCCTG 61.731 63.158 0.00 0.00 0.00 4.85
3899 4275 0.512952 CACCTTGCACGCTCTTACAC 59.487 55.000 0.00 0.00 0.00 2.90
3905 4281 0.950555 TGTCATCACCTTGCACGCTC 60.951 55.000 0.00 0.00 0.00 5.03
3916 4293 6.697455 TCTTTCTTAGTGCGATATGTCATCAC 59.303 38.462 0.00 4.39 0.00 3.06
4003 4433 0.250597 TGCTGCTGAGTGCTGACATT 60.251 50.000 0.00 0.00 42.27 2.71
4008 4438 1.299562 CTCCTTGCTGCTGAGTGCTG 61.300 60.000 0.00 0.00 43.37 4.41
4009 4439 1.003597 CTCCTTGCTGCTGAGTGCT 60.004 57.895 0.00 0.00 43.37 4.40
4012 4442 1.135915 CGTATCTCCTTGCTGCTGAGT 59.864 52.381 0.00 0.00 0.00 3.41
4013 4443 1.135915 ACGTATCTCCTTGCTGCTGAG 59.864 52.381 0.00 4.73 0.00 3.35
4014 4444 1.186200 ACGTATCTCCTTGCTGCTGA 58.814 50.000 0.00 0.00 0.00 4.26
4016 4446 2.379972 ACTACGTATCTCCTTGCTGCT 58.620 47.619 0.00 0.00 0.00 4.24
4017 4447 2.873133 ACTACGTATCTCCTTGCTGC 57.127 50.000 0.00 0.00 0.00 5.25
4018 4448 5.000012 AGAAACTACGTATCTCCTTGCTG 58.000 43.478 0.00 0.00 0.00 4.41
4019 4449 5.411781 CAAGAAACTACGTATCTCCTTGCT 58.588 41.667 0.00 0.00 0.00 3.91
4020 4450 4.567159 CCAAGAAACTACGTATCTCCTTGC 59.433 45.833 16.08 0.00 0.00 4.01
4021 4451 5.962433 TCCAAGAAACTACGTATCTCCTTG 58.038 41.667 15.21 15.21 0.00 3.61
4022 4452 6.014840 TGTTCCAAGAAACTACGTATCTCCTT 60.015 38.462 0.00 0.00 0.00 3.36
4023 4453 5.479375 TGTTCCAAGAAACTACGTATCTCCT 59.521 40.000 0.00 0.00 0.00 3.69
4024 4454 5.575995 GTGTTCCAAGAAACTACGTATCTCC 59.424 44.000 0.00 0.00 0.00 3.71
4025 4455 6.154445 TGTGTTCCAAGAAACTACGTATCTC 58.846 40.000 0.00 0.00 0.00 2.75
4026 4456 6.092955 TGTGTTCCAAGAAACTACGTATCT 57.907 37.500 0.00 0.00 0.00 1.98
4027 4457 6.588756 TCATGTGTTCCAAGAAACTACGTATC 59.411 38.462 0.00 0.00 0.00 2.24
4028 4458 6.460781 TCATGTGTTCCAAGAAACTACGTAT 58.539 36.000 0.00 0.00 0.00 3.06
4029 4459 5.845103 TCATGTGTTCCAAGAAACTACGTA 58.155 37.500 0.00 0.00 0.00 3.57
4030 4460 4.699637 TCATGTGTTCCAAGAAACTACGT 58.300 39.130 0.00 0.00 0.00 3.57
4031 4461 5.236478 ACTTCATGTGTTCCAAGAAACTACG 59.764 40.000 0.00 0.00 30.94 3.51
4032 4462 6.260050 TGACTTCATGTGTTCCAAGAAACTAC 59.740 38.462 0.00 0.00 30.94 2.73
4033 4463 6.353323 TGACTTCATGTGTTCCAAGAAACTA 58.647 36.000 0.00 0.00 30.94 2.24
4034 4464 5.192927 TGACTTCATGTGTTCCAAGAAACT 58.807 37.500 0.00 0.00 30.94 2.66
4035 4465 5.499139 TGACTTCATGTGTTCCAAGAAAC 57.501 39.130 0.00 0.00 30.94 2.78
4036 4466 6.075762 CATGACTTCATGTGTTCCAAGAAA 57.924 37.500 10.57 0.00 46.40 2.52
4037 4467 5.694231 CATGACTTCATGTGTTCCAAGAA 57.306 39.130 10.57 0.00 46.40 2.52
4048 4478 7.048629 ACAGAGGTATCTACATGACTTCATG 57.951 40.000 16.17 16.17 45.55 3.07
4049 4479 6.266558 GGACAGAGGTATCTACATGACTTCAT 59.733 42.308 0.00 0.00 33.42 2.57
4050 4480 5.594725 GGACAGAGGTATCTACATGACTTCA 59.405 44.000 0.00 0.00 33.22 3.02
4051 4481 5.594725 TGGACAGAGGTATCTACATGACTTC 59.405 44.000 0.00 0.00 33.22 3.01
4052 4482 5.519808 TGGACAGAGGTATCTACATGACTT 58.480 41.667 0.00 0.00 33.22 3.01
4053 4483 5.130705 TGGACAGAGGTATCTACATGACT 57.869 43.478 0.00 0.00 33.22 3.41
4054 4484 5.279206 CCATGGACAGAGGTATCTACATGAC 60.279 48.000 5.56 0.00 40.36 3.06
4055 4485 4.835056 CCATGGACAGAGGTATCTACATGA 59.165 45.833 5.56 0.00 40.36 3.07
4056 4486 4.590647 ACCATGGACAGAGGTATCTACATG 59.409 45.833 21.47 0.00 39.09 3.21
4057 4487 4.820775 ACCATGGACAGAGGTATCTACAT 58.179 43.478 21.47 0.00 33.22 2.29
4058 4488 4.215908 GACCATGGACAGAGGTATCTACA 58.784 47.826 21.47 0.00 35.36 2.74
4059 4489 3.253677 CGACCATGGACAGAGGTATCTAC 59.746 52.174 21.47 0.00 35.36 2.59
4060 4490 3.487372 CGACCATGGACAGAGGTATCTA 58.513 50.000 21.47 0.00 35.36 1.98
4061 4491 2.311463 CGACCATGGACAGAGGTATCT 58.689 52.381 21.47 0.00 35.36 1.98
4062 4492 1.269831 GCGACCATGGACAGAGGTATC 60.270 57.143 21.47 0.35 35.36 2.24
4063 4493 0.753262 GCGACCATGGACAGAGGTAT 59.247 55.000 21.47 0.00 35.36 2.73
4064 4494 0.324368 AGCGACCATGGACAGAGGTA 60.324 55.000 21.47 0.00 35.36 3.08
4065 4495 1.608717 GAGCGACCATGGACAGAGGT 61.609 60.000 21.47 9.75 38.63 3.85
4066 4496 1.142748 GAGCGACCATGGACAGAGG 59.857 63.158 21.47 0.08 0.00 3.69
4067 4497 0.459237 GTGAGCGACCATGGACAGAG 60.459 60.000 21.47 5.56 0.00 3.35
4068 4498 1.591703 GTGAGCGACCATGGACAGA 59.408 57.895 21.47 0.00 0.00 3.41
4069 4499 1.807165 CGTGAGCGACCATGGACAG 60.807 63.158 21.47 10.09 41.33 3.51
4070 4500 2.261361 CGTGAGCGACCATGGACA 59.739 61.111 21.47 7.44 41.33 4.02
4071 4501 2.571757 TCGTGAGCGACCATGGAC 59.428 61.111 21.47 12.21 42.81 4.02
4083 4513 2.677199 GCAGTGTTTCTCAGATCGTGA 58.323 47.619 0.00 0.00 0.00 4.35
4084 4514 1.388093 CGCAGTGTTTCTCAGATCGTG 59.612 52.381 0.00 0.00 0.00 4.35
4085 4515 1.702886 CGCAGTGTTTCTCAGATCGT 58.297 50.000 0.00 0.00 0.00 3.73
4086 4516 0.368227 GCGCAGTGTTTCTCAGATCG 59.632 55.000 0.30 0.00 0.00 3.69
4087 4517 0.368227 CGCGCAGTGTTTCTCAGATC 59.632 55.000 8.75 0.00 0.00 2.75
4088 4518 1.630244 GCGCGCAGTGTTTCTCAGAT 61.630 55.000 29.10 0.00 41.96 2.90
4089 4519 2.310233 GCGCGCAGTGTTTCTCAGA 61.310 57.895 29.10 0.00 41.96 3.27
4090 4520 1.835483 AAGCGCGCAGTGTTTCTCAG 61.835 55.000 35.10 0.00 36.57 3.35
4155 4590 0.538057 CCAACTGATGCCACCACACT 60.538 55.000 0.00 0.00 0.00 3.55
4156 4591 1.959085 CCAACTGATGCCACCACAC 59.041 57.895 0.00 0.00 0.00 3.82
4177 4619 4.192453 ACCGGGGCAAACGACCAA 62.192 61.111 6.32 0.00 30.27 3.67
4202 4644 4.378874 GCTCAGTTTTGGTATCTGTGCTTC 60.379 45.833 9.96 0.00 41.96 3.86
4284 4726 4.098501 CCAACTCTTTTTGCTTTCAGGAGT 59.901 41.667 0.00 0.00 34.60 3.85
4287 4729 3.126073 GCCAACTCTTTTTGCTTTCAGG 58.874 45.455 0.00 0.00 0.00 3.86
4289 4731 3.446873 TGAGCCAACTCTTTTTGCTTTCA 59.553 39.130 0.00 0.00 43.85 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.