Multiple sequence alignment - TraesCS2B01G438200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G438200 chr2B 100.000 7916 0 0 1 7916 630142704 630134789 0.000000e+00 14619.0
1 TraesCS2B01G438200 chr2B 89.320 1030 101 7 5807 6833 631102872 631101849 0.000000e+00 1284.0
2 TraesCS2B01G438200 chr2B 80.530 1546 201 58 2399 3888 631106358 631104857 0.000000e+00 1096.0
3 TraesCS2B01G438200 chr2B 97.423 388 9 1 1 388 683096425 683096039 0.000000e+00 660.0
4 TraesCS2B01G438200 chr2B 97.416 387 10 0 1 387 699182050 699182436 0.000000e+00 660.0
5 TraesCS2B01G438200 chr2B 97.638 381 9 0 1 381 123108845 123108465 0.000000e+00 654.0
6 TraesCS2B01G438200 chr2B 78.000 1050 198 27 5796 6833 631203831 631202803 5.210000e-176 628.0
7 TraesCS2B01G438200 chr2B 91.736 363 25 3 2037 2398 631106684 631106326 4.270000e-137 499.0
8 TraesCS2B01G438200 chr2B 80.350 514 70 15 3265 3760 631106630 631106130 2.100000e-95 361.0
9 TraesCS2B01G438200 chr2B 83.884 242 26 8 6983 7218 631101630 631101396 1.340000e-52 219.0
10 TraesCS2B01G438200 chr2B 97.500 120 2 1 7778 7896 90192263 90192382 3.750000e-48 204.0
11 TraesCS2B01G438200 chr2B 92.958 142 3 6 7772 7908 666102785 666102924 4.840000e-47 200.0
12 TraesCS2B01G438200 chr2B 80.851 141 22 4 7211 7347 749803202 749803341 1.090000e-18 106.0
13 TraesCS2B01G438200 chr2B 86.792 53 7 0 1792 1844 631105995 631105943 8.580000e-05 60.2
14 TraesCS2B01G438200 chr2D 94.407 3558 104 22 378 3888 530265480 530261971 0.000000e+00 5380.0
15 TraesCS2B01G438200 chr2D 94.583 3249 142 8 3881 7107 530261947 530258711 0.000000e+00 4994.0
16 TraesCS2B01G438200 chr2D 88.835 1039 82 11 5807 6842 531264048 531263041 0.000000e+00 1245.0
17 TraesCS2B01G438200 chr2D 92.566 834 20 8 6983 7780 530258791 530257964 0.000000e+00 1158.0
18 TraesCS2B01G438200 chr2D 80.577 1524 194 49 2401 3869 531267448 531265972 0.000000e+00 1081.0
19 TraesCS2B01G438200 chr2D 77.355 1051 203 28 5796 6833 531349075 531348047 2.460000e-164 590.0
20 TraesCS2B01G438200 chr2D 92.973 370 24 2 2030 2398 531267786 531267418 9.040000e-149 538.0
21 TraesCS2B01G438200 chr2D 79.831 590 78 21 3189 3760 531267786 531267220 7.450000e-105 392.0
22 TraesCS2B01G438200 chr2D 73.908 870 193 23 4141 4990 531265767 531264912 1.280000e-82 318.0
23 TraesCS2B01G438200 chr2D 81.282 390 51 7 3187 3574 530263828 530263459 6.010000e-76 296.0
24 TraesCS2B01G438200 chr2D 84.298 242 27 7 6983 7218 531262785 531262549 7.990000e-55 226.0
25 TraesCS2B01G438200 chr2D 83.884 242 17 10 1786 2005 531268024 531267783 2.240000e-50 211.0
26 TraesCS2B01G438200 chr2D 86.667 60 7 1 1792 1850 531267084 531267025 1.840000e-06 65.8
27 TraesCS2B01G438200 chr2D 100.000 34 0 0 2365 2398 530263459 530263426 6.630000e-06 63.9
28 TraesCS2B01G438200 chr2D 93.023 43 1 2 7351 7391 615384244 615384286 2.390000e-05 62.1
29 TraesCS2B01G438200 chr2A 94.378 3504 145 13 3881 7353 675083048 675079566 0.000000e+00 5332.0
30 TraesCS2B01G438200 chr2A 95.970 3102 83 13 809 3888 675086153 675083072 0.000000e+00 4998.0
31 TraesCS2B01G438200 chr2A 91.250 1040 82 5 5806 6842 675747930 675746897 0.000000e+00 1408.0
32 TraesCS2B01G438200 chr2A 80.762 1523 195 47 2401 3869 675751340 675749862 0.000000e+00 1099.0
33 TraesCS2B01G438200 chr2A 77.660 1034 200 24 5811 6833 675897503 675896490 1.140000e-167 601.0
34 TraesCS2B01G438200 chr2A 92.562 363 25 2 2037 2398 675751671 675751310 3.270000e-143 520.0
35 TraesCS2B01G438200 chr2A 96.516 287 6 1 7464 7750 675079514 675079232 9.300000e-129 472.0
36 TraesCS2B01G438200 chr2A 80.000 585 70 19 3197 3760 675751670 675751112 9.630000e-104 388.0
37 TraesCS2B01G438200 chr2A 73.124 1053 225 39 4141 5153 675749658 675748624 2.760000e-84 324.0
38 TraesCS2B01G438200 chr2A 81.282 390 51 7 3187 3574 675084925 675084556 6.010000e-76 296.0
39 TraesCS2B01G438200 chr2A 81.532 222 29 9 1786 1996 675751890 675751670 1.060000e-38 172.0
40 TraesCS2B01G438200 chr2A 85.185 162 15 3 449 610 675088290 675088138 2.960000e-34 158.0
41 TraesCS2B01G438200 chr2A 81.884 138 22 3 7211 7347 745392777 745392912 6.490000e-21 113.0
42 TraesCS2B01G438200 chr2A 86.667 60 7 1 1792 1850 675750976 675750917 1.840000e-06 65.8
43 TraesCS2B01G438200 chr4D 94.952 1050 47 4 2841 3888 410440054 410439009 0.000000e+00 1640.0
44 TraesCS2B01G438200 chr4D 94.089 203 11 1 3881 4083 410438985 410438784 2.770000e-79 307.0
45 TraesCS2B01G438200 chr3D 95.469 927 36 4 2842 3766 554513152 554514074 0.000000e+00 1474.0
46 TraesCS2B01G438200 chr3D 94.712 208 10 1 3878 4085 554514185 554514391 9.910000e-84 322.0
47 TraesCS2B01G438200 chr3D 92.857 140 9 1 7756 7894 489175782 489175921 1.350000e-47 202.0
48 TraesCS2B01G438200 chr3D 90.566 106 8 2 3785 3889 554514061 554514165 1.070000e-28 139.0
49 TraesCS2B01G438200 chr3B 98.421 380 6 0 1 380 171120455 171120076 0.000000e+00 669.0
50 TraesCS2B01G438200 chr3B 98.408 377 6 0 1 377 247809350 247808974 0.000000e+00 664.0
51 TraesCS2B01G438200 chr3B 84.821 112 10 3 6615 6720 732058711 732058601 1.090000e-18 106.0
52 TraesCS2B01G438200 chr7B 97.884 378 8 0 1 378 552549091 552549468 0.000000e+00 654.0
53 TraesCS2B01G438200 chrUn 97.632 380 9 0 3 382 240107797 240108176 0.000000e+00 652.0
54 TraesCS2B01G438200 chrUn 94.574 129 3 3 7779 7906 88642581 88642456 6.270000e-46 196.0
55 TraesCS2B01G438200 chrUn 94.574 129 3 3 7779 7906 283732672 283732547 6.270000e-46 196.0
56 TraesCS2B01G438200 chr3A 96.907 388 11 1 1 388 522043758 522043372 0.000000e+00 649.0
57 TraesCS2B01G438200 chr3A 96.694 121 3 1 7778 7897 702912139 702912259 4.840000e-47 200.0
58 TraesCS2B01G438200 chr5B 96.632 386 12 1 1 386 587467566 587467950 2.410000e-179 640.0
59 TraesCS2B01G438200 chr5B 96.800 125 2 2 7776 7899 79817873 79817996 2.900000e-49 207.0
60 TraesCS2B01G438200 chr6B 96.000 125 3 2 7776 7899 267021771 267021894 1.350000e-47 202.0
61 TraesCS2B01G438200 chr5D 92.806 139 7 2 7779 7914 30459188 30459050 1.740000e-46 198.0
62 TraesCS2B01G438200 chr4B 85.906 149 17 4 3609 3756 58060771 58060626 1.060000e-33 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G438200 chr2B 630134789 630142704 7915 True 14619.000000 14619 100.000000 1 7916 1 chr2B.!!$R2 7915
1 TraesCS2B01G438200 chr2B 631202803 631203831 1028 True 628.000000 628 78.000000 5796 6833 1 chr2B.!!$R3 1037
2 TraesCS2B01G438200 chr2B 631101396 631106684 5288 True 586.533333 1284 85.435333 1792 7218 6 chr2B.!!$R5 5426
3 TraesCS2B01G438200 chr2D 530257964 530265480 7516 True 2378.380000 5380 92.567600 378 7780 5 chr2D.!!$R2 7402
4 TraesCS2B01G438200 chr2D 531348047 531349075 1028 True 590.000000 590 77.355000 5796 6833 1 chr2D.!!$R1 1037
5 TraesCS2B01G438200 chr2D 531262549 531268024 5475 True 509.600000 1245 83.871625 1786 7218 8 chr2D.!!$R3 5432
6 TraesCS2B01G438200 chr2A 675079232 675088290 9058 True 2251.200000 5332 90.666200 449 7750 5 chr2A.!!$R2 7301
7 TraesCS2B01G438200 chr2A 675896490 675897503 1013 True 601.000000 601 77.660000 5811 6833 1 chr2A.!!$R1 1022
8 TraesCS2B01G438200 chr2A 675746897 675751890 4993 True 568.114286 1408 83.699571 1786 6842 7 chr2A.!!$R3 5056
9 TraesCS2B01G438200 chr4D 410438784 410440054 1270 True 973.500000 1640 94.520500 2841 4083 2 chr4D.!!$R1 1242
10 TraesCS2B01G438200 chr3D 554513152 554514391 1239 False 645.000000 1474 93.582333 2842 4085 3 chr3D.!!$F2 1243

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
311 312 0.316442 CATGCGATGACGTGGCAATC 60.316 55.000 8.50 0.00 44.94 2.67 F
339 340 0.386476 TTAGAGACGTGTGGTGCGTT 59.614 50.000 0.00 0.00 43.04 4.84 F
1634 3560 0.400594 GACAAGTACCCCCAGCAGTT 59.599 55.000 0.00 0.00 0.00 3.16 F
1858 3785 0.517316 GGCGTGCTGTTTACCTTCTG 59.483 55.000 0.00 0.00 0.00 3.02 F
2206 4155 0.950836 TGTGGTGTTGAATTCGCCTG 59.049 50.000 0.04 0.00 36.54 4.85 F
2255 4205 1.270839 TGGTAGCCTCTGTTCTGCAAC 60.271 52.381 0.00 0.00 0.00 4.17 F
2853 4832 1.670811 CTACGGGCCTGTAATTGCAAG 59.329 52.381 24.58 9.83 0.00 4.01 F
4304 6350 0.249398 ACGGACCTACAATGCCTCAC 59.751 55.000 0.00 0.00 0.00 3.51 F
4937 6995 1.134220 AGAGAACGGACAAGCCAAACA 60.134 47.619 0.00 0.00 35.94 2.83 F
6248 8427 0.172578 CAGTACGTGCCGAGAATCCA 59.827 55.000 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2199 4148 0.036483 TCAGTTAGCATGCAGGCGAA 60.036 50.000 21.98 16.77 39.27 4.70 R
2223 4172 4.819630 CAGAGGCTACCAACAACAGTTTAA 59.180 41.667 0.00 0.00 0.00 1.52 R
3126 5112 0.940126 GGAGCACACATAGGCATTCG 59.060 55.000 0.00 0.00 0.00 3.34 R
3815 5827 4.537015 GGAAATCACTCAACGTTTCCAAG 58.463 43.478 0.00 0.00 45.57 3.61 R
4003 6049 3.519510 TGACTTCTACCTCTTCAATGGGG 59.480 47.826 0.00 0.00 0.00 4.96 R
4244 6290 3.017442 GGGATAAACCTTCTGGCAGTTC 58.983 50.000 15.27 0.00 38.98 3.01 R
4332 6378 0.180642 AGGCACATGCTCATCAGAGG 59.819 55.000 3.48 0.00 42.33 3.69 R
5853 8029 1.023513 CAGCCTCCTTCGCTTTCCTG 61.024 60.000 0.00 0.00 33.17 3.86 R
6429 8608 0.107116 AGTCGTCCTCGCAGATACCT 60.107 55.000 0.00 0.00 33.89 3.08 R
7871 10254 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.463902 TCTTAATTCCCCGTTTTATAAATGTCA 57.536 29.630 0.00 0.00 0.00 3.58
34 35 9.952030 AATTCCCCGTTTTATAAATGTCAAAAT 57.048 25.926 0.00 0.00 0.00 1.82
35 36 9.952030 ATTCCCCGTTTTATAAATGTCAAAATT 57.048 25.926 0.00 0.00 0.00 1.82
36 37 9.780186 TTCCCCGTTTTATAAATGTCAAAATTT 57.220 25.926 0.00 0.00 34.24 1.82
76 77 9.674824 GAAGAAAATAGCTGAAACATATCATGG 57.325 33.333 0.00 0.00 33.60 3.66
77 78 7.655490 AGAAAATAGCTGAAACATATCATGGC 58.345 34.615 0.00 0.00 33.60 4.40
78 79 6.964807 AAATAGCTGAAACATATCATGGCA 57.035 33.333 0.00 0.00 33.60 4.92
81 82 4.275810 AGCTGAAACATATCATGGCAACT 58.724 39.130 0.00 0.00 37.61 3.16
82 83 4.708421 AGCTGAAACATATCATGGCAACTT 59.292 37.500 0.00 0.00 37.61 2.66
83 84 5.039333 GCTGAAACATATCATGGCAACTTC 58.961 41.667 0.00 0.00 37.61 3.01
84 85 5.393352 GCTGAAACATATCATGGCAACTTCA 60.393 40.000 0.00 0.00 37.61 3.02
85 86 6.198650 TGAAACATATCATGGCAACTTCAG 57.801 37.500 0.00 0.00 37.61 3.02
89 90 5.744171 ACATATCATGGCAACTTCAGTGTA 58.256 37.500 0.00 0.00 37.61 2.90
91 92 6.658816 ACATATCATGGCAACTTCAGTGTAAA 59.341 34.615 0.00 0.00 37.61 2.01
92 93 4.829064 TCATGGCAACTTCAGTGTAAAC 57.171 40.909 0.00 0.00 37.61 2.01
93 94 4.460263 TCATGGCAACTTCAGTGTAAACT 58.540 39.130 0.00 0.00 37.61 2.66
94 95 4.887071 TCATGGCAACTTCAGTGTAAACTT 59.113 37.500 0.00 0.00 37.61 2.66
95 96 4.893424 TGGCAACTTCAGTGTAAACTTC 57.107 40.909 0.00 0.00 37.61 3.01
97 98 4.887071 TGGCAACTTCAGTGTAAACTTCAT 59.113 37.500 0.00 0.00 37.61 2.57
98 99 5.215160 GGCAACTTCAGTGTAAACTTCATG 58.785 41.667 0.00 0.00 0.00 3.07
99 100 5.215160 GCAACTTCAGTGTAAACTTCATGG 58.785 41.667 0.00 0.00 0.00 3.66
100 101 5.215160 CAACTTCAGTGTAAACTTCATGGC 58.785 41.667 0.00 0.00 0.00 4.40
101 102 4.460263 ACTTCAGTGTAAACTTCATGGCA 58.540 39.130 0.00 0.00 0.00 4.92
102 103 4.887071 ACTTCAGTGTAAACTTCATGGCAA 59.113 37.500 0.00 0.00 0.00 4.52
106 107 5.534278 TCAGTGTAAACTTCATGGCAATTCA 59.466 36.000 0.00 0.00 0.00 2.57
107 108 6.209192 TCAGTGTAAACTTCATGGCAATTCAT 59.791 34.615 0.00 0.00 0.00 2.57
108 109 7.392953 TCAGTGTAAACTTCATGGCAATTCATA 59.607 33.333 0.00 0.00 0.00 2.15
109 110 8.192774 CAGTGTAAACTTCATGGCAATTCATAT 58.807 33.333 0.00 0.00 0.00 1.78
110 111 8.192774 AGTGTAAACTTCATGGCAATTCATATG 58.807 33.333 0.00 0.00 0.00 1.78
111 112 7.975616 GTGTAAACTTCATGGCAATTCATATGT 59.024 33.333 1.90 0.00 0.00 2.29
112 113 9.183368 TGTAAACTTCATGGCAATTCATATGTA 57.817 29.630 1.90 0.00 0.00 2.29
119 120 9.571816 TTCATGGCAATTCATATGTAATAGACA 57.428 29.630 1.90 0.00 43.97 3.41
135 136 8.682710 TGTAATAGACATGGCAACTTTTAATCC 58.317 33.333 0.00 0.00 31.20 3.01
136 137 7.716799 AATAGACATGGCAACTTTTAATCCA 57.283 32.000 0.00 0.00 37.61 3.41
137 138 7.716799 ATAGACATGGCAACTTTTAATCCAA 57.283 32.000 0.00 0.00 37.61 3.53
138 139 6.418057 AGACATGGCAACTTTTAATCCAAA 57.582 33.333 0.00 0.00 37.61 3.28
139 140 6.825610 AGACATGGCAACTTTTAATCCAAAA 58.174 32.000 0.00 0.00 34.89 2.44
140 141 7.278875 AGACATGGCAACTTTTAATCCAAAAA 58.721 30.769 0.00 0.00 35.71 1.94
168 169 8.951787 ATTTCATCAAAACATATCAACATGGG 57.048 30.769 0.00 0.00 0.00 4.00
169 170 7.715266 TTCATCAAAACATATCAACATGGGA 57.285 32.000 0.00 0.00 0.00 4.37
171 172 7.944061 TCATCAAAACATATCAACATGGGATC 58.056 34.615 5.52 0.00 0.00 3.36
172 173 7.781219 TCATCAAAACATATCAACATGGGATCT 59.219 33.333 5.52 0.00 0.00 2.75
173 174 9.070179 CATCAAAACATATCAACATGGGATCTA 57.930 33.333 5.52 0.00 0.00 1.98
174 175 8.681486 TCAAAACATATCAACATGGGATCTAG 57.319 34.615 5.52 0.00 0.00 2.43
175 176 8.274322 TCAAAACATATCAACATGGGATCTAGT 58.726 33.333 5.52 1.99 0.00 2.57
176 177 8.906867 CAAAACATATCAACATGGGATCTAGTT 58.093 33.333 5.52 6.83 0.00 2.24
177 178 9.479549 AAAACATATCAACATGGGATCTAGTTT 57.520 29.630 5.52 11.05 30.93 2.66
178 179 8.682936 AACATATCAACATGGGATCTAGTTTC 57.317 34.615 5.52 0.00 0.00 2.78
179 180 6.931281 ACATATCAACATGGGATCTAGTTTCG 59.069 38.462 5.52 0.00 0.00 3.46
181 182 5.414789 TCAACATGGGATCTAGTTTCGAA 57.585 39.130 0.00 0.00 0.00 3.71
182 183 5.419542 TCAACATGGGATCTAGTTTCGAAG 58.580 41.667 0.00 0.00 0.00 3.79
183 184 5.186992 TCAACATGGGATCTAGTTTCGAAGA 59.813 40.000 0.00 0.00 0.00 2.87
184 185 5.878406 ACATGGGATCTAGTTTCGAAGAT 57.122 39.130 0.00 0.00 35.04 2.40
185 186 5.848406 ACATGGGATCTAGTTTCGAAGATC 58.152 41.667 14.01 14.01 44.88 2.75
186 187 5.600484 ACATGGGATCTAGTTTCGAAGATCT 59.400 40.000 19.29 12.50 44.94 2.75
187 188 5.776173 TGGGATCTAGTTTCGAAGATCTC 57.224 43.478 19.29 17.27 45.96 2.75
188 189 5.776173 GGGATCTAGTTTCGAAGATCTCA 57.224 43.478 19.29 0.00 45.36 3.27
190 191 6.386654 GGGATCTAGTTTCGAAGATCTCATC 58.613 44.000 19.29 13.26 45.36 2.92
191 192 6.083630 GGATCTAGTTTCGAAGATCTCATCG 58.916 44.000 19.29 10.02 44.94 3.84
192 193 4.849883 TCTAGTTTCGAAGATCTCATCGC 58.150 43.478 11.22 0.00 37.05 4.58
193 194 2.455032 AGTTTCGAAGATCTCATCGCG 58.545 47.619 11.22 0.00 37.05 5.87
195 196 2.391322 TTCGAAGATCTCATCGCGAG 57.609 50.000 16.66 7.11 43.80 5.03
198 199 0.955178 GAAGATCTCATCGCGAGGGA 59.045 55.000 21.76 16.72 42.55 4.20
200 201 1.626686 AGATCTCATCGCGAGGGATT 58.373 50.000 21.76 5.43 42.55 3.01
202 203 3.157881 AGATCTCATCGCGAGGGATTTA 58.842 45.455 21.76 0.00 42.55 1.40
203 204 3.574396 AGATCTCATCGCGAGGGATTTAA 59.426 43.478 21.76 0.00 42.55 1.52
206 207 2.738846 CTCATCGCGAGGGATTTAATGG 59.261 50.000 21.76 0.53 38.18 3.16
207 208 2.104111 TCATCGCGAGGGATTTAATGGT 59.896 45.455 21.76 0.00 0.00 3.55
209 210 1.483004 TCGCGAGGGATTTAATGGTGA 59.517 47.619 3.71 0.00 0.00 4.02
211 212 2.680841 CGCGAGGGATTTAATGGTGAAA 59.319 45.455 0.00 0.00 0.00 2.69
212 213 3.127895 CGCGAGGGATTTAATGGTGAAAA 59.872 43.478 0.00 0.00 0.00 2.29
213 214 4.421058 GCGAGGGATTTAATGGTGAAAAC 58.579 43.478 0.00 0.00 0.00 2.43
214 215 4.658071 CGAGGGATTTAATGGTGAAAACG 58.342 43.478 0.00 0.00 0.00 3.60
217 218 5.269189 AGGGATTTAATGGTGAAAACGGAT 58.731 37.500 0.00 0.00 0.00 4.18
218 219 5.719563 AGGGATTTAATGGTGAAAACGGATT 59.280 36.000 0.00 0.00 0.00 3.01
220 221 6.876789 GGGATTTAATGGTGAAAACGGATTTT 59.123 34.615 0.00 0.00 40.83 1.82
233 234 7.722795 AAAACGGATTTTCAATCGGATTTTT 57.277 28.000 0.00 5.70 32.29 1.94
234 235 6.944557 AACGGATTTTCAATCGGATTTTTC 57.055 33.333 0.00 0.00 0.00 2.29
235 236 6.019779 ACGGATTTTCAATCGGATTTTTCA 57.980 33.333 0.00 0.00 0.00 2.69
236 237 6.630071 ACGGATTTTCAATCGGATTTTTCAT 58.370 32.000 0.00 0.00 0.00 2.57
237 238 7.096551 ACGGATTTTCAATCGGATTTTTCATT 58.903 30.769 0.00 0.00 0.00 2.57
238 239 7.602265 ACGGATTTTCAATCGGATTTTTCATTT 59.398 29.630 0.00 0.00 0.00 2.32
239 240 9.081997 CGGATTTTCAATCGGATTTTTCATTTA 57.918 29.630 0.00 0.00 0.00 1.40
282 283 9.685276 AAAAACTGAAAATCCAAAAAGATTCCT 57.315 25.926 0.00 0.00 35.40 3.36
283 284 8.667076 AAACTGAAAATCCAAAAAGATTCCTG 57.333 30.769 0.00 0.00 35.40 3.86
284 285 6.226052 ACTGAAAATCCAAAAAGATTCCTGC 58.774 36.000 0.00 0.00 35.40 4.85
285 286 6.172136 TGAAAATCCAAAAAGATTCCTGCA 57.828 33.333 0.00 0.00 35.40 4.41
286 287 6.771573 TGAAAATCCAAAAAGATTCCTGCAT 58.228 32.000 0.00 0.00 35.40 3.96
287 288 6.651643 TGAAAATCCAAAAAGATTCCTGCATG 59.348 34.615 0.00 0.00 35.40 4.06
288 289 3.598019 TCCAAAAAGATTCCTGCATGC 57.402 42.857 11.82 11.82 0.00 4.06
289 290 2.898612 TCCAAAAAGATTCCTGCATGCA 59.101 40.909 21.29 21.29 0.00 3.96
290 291 3.516300 TCCAAAAAGATTCCTGCATGCAT 59.484 39.130 22.97 5.92 0.00 3.96
291 292 3.621268 CCAAAAAGATTCCTGCATGCATG 59.379 43.478 22.97 22.70 0.00 4.06
304 305 2.711311 GCATGCATGCGATGACGT 59.289 55.556 33.99 0.00 44.67 4.34
305 306 1.653232 GCATGCATGCGATGACGTG 60.653 57.895 33.99 3.92 44.67 4.49
306 307 1.010462 CATGCATGCGATGACGTGG 60.010 57.895 14.93 0.00 41.98 4.94
307 308 2.827051 ATGCATGCGATGACGTGGC 61.827 57.895 14.09 0.00 41.98 5.01
308 309 3.498834 GCATGCGATGACGTGGCA 61.499 61.111 0.00 6.82 45.88 4.92
309 310 3.037992 GCATGCGATGACGTGGCAA 62.038 57.895 8.50 0.00 44.94 4.52
310 311 1.723273 CATGCGATGACGTGGCAAT 59.277 52.632 8.50 0.00 44.94 3.56
311 312 0.316442 CATGCGATGACGTGGCAATC 60.316 55.000 8.50 0.00 44.94 2.67
312 313 0.462581 ATGCGATGACGTGGCAATCT 60.463 50.000 8.50 0.00 44.94 2.40
313 314 1.349627 GCGATGACGTGGCAATCTG 59.650 57.895 0.00 0.00 41.98 2.90
314 315 1.361668 GCGATGACGTGGCAATCTGT 61.362 55.000 0.00 0.00 41.98 3.41
315 316 1.078709 CGATGACGTGGCAATCTGTT 58.921 50.000 0.00 0.00 34.56 3.16
316 317 1.464608 CGATGACGTGGCAATCTGTTT 59.535 47.619 0.00 0.00 34.56 2.83
317 318 2.670905 CGATGACGTGGCAATCTGTTTA 59.329 45.455 0.00 0.00 34.56 2.01
318 319 3.483574 CGATGACGTGGCAATCTGTTTAC 60.484 47.826 0.00 0.00 34.56 2.01
319 320 2.839975 TGACGTGGCAATCTGTTTACA 58.160 42.857 0.00 0.00 0.00 2.41
320 321 3.407698 TGACGTGGCAATCTGTTTACAT 58.592 40.909 0.00 0.00 0.00 2.29
321 322 3.818210 TGACGTGGCAATCTGTTTACATT 59.182 39.130 0.00 0.00 0.00 2.71
322 323 4.998033 TGACGTGGCAATCTGTTTACATTA 59.002 37.500 0.00 0.00 0.00 1.90
323 324 5.121611 TGACGTGGCAATCTGTTTACATTAG 59.878 40.000 0.00 0.00 0.00 1.73
324 325 5.242434 ACGTGGCAATCTGTTTACATTAGA 58.758 37.500 0.00 0.00 0.00 2.10
325 326 5.351465 ACGTGGCAATCTGTTTACATTAGAG 59.649 40.000 0.00 0.00 0.00 2.43
326 327 5.580691 CGTGGCAATCTGTTTACATTAGAGA 59.419 40.000 0.00 0.00 0.00 3.10
327 328 6.455646 CGTGGCAATCTGTTTACATTAGAGAC 60.456 42.308 0.00 0.00 0.00 3.36
328 329 5.580691 TGGCAATCTGTTTACATTAGAGACG 59.419 40.000 0.00 0.00 0.00 4.18
329 330 5.581085 GGCAATCTGTTTACATTAGAGACGT 59.419 40.000 0.00 0.00 0.00 4.34
330 331 6.455646 GGCAATCTGTTTACATTAGAGACGTG 60.456 42.308 0.00 0.00 0.00 4.49
331 332 6.090898 GCAATCTGTTTACATTAGAGACGTGT 59.909 38.462 0.00 0.00 0.00 4.49
332 333 7.448228 CAATCTGTTTACATTAGAGACGTGTG 58.552 38.462 0.00 0.00 0.00 3.82
333 334 5.466819 TCTGTTTACATTAGAGACGTGTGG 58.533 41.667 0.00 0.00 0.00 4.17
334 335 5.010314 TCTGTTTACATTAGAGACGTGTGGT 59.990 40.000 0.00 0.00 0.00 4.16
335 336 4.986034 TGTTTACATTAGAGACGTGTGGTG 59.014 41.667 0.00 0.00 0.00 4.17
336 337 2.080286 ACATTAGAGACGTGTGGTGC 57.920 50.000 0.00 0.00 0.00 5.01
337 338 0.992072 CATTAGAGACGTGTGGTGCG 59.008 55.000 0.00 0.00 0.00 5.34
338 339 0.601558 ATTAGAGACGTGTGGTGCGT 59.398 50.000 0.00 0.00 45.86 5.24
339 340 0.386476 TTAGAGACGTGTGGTGCGTT 59.614 50.000 0.00 0.00 43.04 4.84
340 341 0.386476 TAGAGACGTGTGGTGCGTTT 59.614 50.000 0.00 0.00 43.04 3.60
341 342 0.874607 AGAGACGTGTGGTGCGTTTC 60.875 55.000 0.00 0.00 43.04 2.78
342 343 1.828331 GAGACGTGTGGTGCGTTTCC 61.828 60.000 0.00 0.00 43.04 3.13
343 344 2.888998 GACGTGTGGTGCGTTTCCC 61.889 63.158 0.00 0.00 43.04 3.97
344 345 2.590575 CGTGTGGTGCGTTTCCCT 60.591 61.111 0.00 0.00 0.00 4.20
345 346 2.184167 CGTGTGGTGCGTTTCCCTT 61.184 57.895 0.00 0.00 0.00 3.95
346 347 1.652563 GTGTGGTGCGTTTCCCTTC 59.347 57.895 0.00 0.00 0.00 3.46
347 348 1.890041 TGTGGTGCGTTTCCCTTCG 60.890 57.895 0.00 0.00 0.00 3.79
348 349 1.890510 GTGGTGCGTTTCCCTTCGT 60.891 57.895 0.00 0.00 0.00 3.85
349 350 1.890041 TGGTGCGTTTCCCTTCGTG 60.890 57.895 0.00 0.00 0.00 4.35
350 351 2.251371 GTGCGTTTCCCTTCGTGC 59.749 61.111 0.00 0.00 0.00 5.34
351 352 2.975799 TGCGTTTCCCTTCGTGCC 60.976 61.111 0.00 0.00 0.00 5.01
352 353 2.975799 GCGTTTCCCTTCGTGCCA 60.976 61.111 0.00 0.00 0.00 4.92
353 354 2.943653 CGTTTCCCTTCGTGCCAC 59.056 61.111 0.00 0.00 0.00 5.01
354 355 1.890041 CGTTTCCCTTCGTGCCACA 60.890 57.895 0.00 0.00 0.00 4.17
355 356 1.652563 GTTTCCCTTCGTGCCACAC 59.347 57.895 0.00 0.00 0.00 3.82
369 370 1.569493 CACACGTGTGGCAGTTAGC 59.431 57.895 35.65 0.00 42.10 3.09
378 379 2.434359 GCAGTTAGCGCGACCCTT 60.434 61.111 12.10 0.00 0.00 3.95
379 380 2.033194 GCAGTTAGCGCGACCCTTT 61.033 57.895 12.10 0.00 0.00 3.11
380 381 1.574702 GCAGTTAGCGCGACCCTTTT 61.575 55.000 12.10 0.00 0.00 2.27
381 382 0.872388 CAGTTAGCGCGACCCTTTTT 59.128 50.000 12.10 0.00 0.00 1.94
393 394 4.320935 GCGACCCTTTTTCTTAATGAAGCA 60.321 41.667 0.00 0.00 35.89 3.91
400 401 3.829886 TTCTTAATGAAGCAAGGCACG 57.170 42.857 0.00 0.00 32.21 5.34
410 411 3.550437 AGCAAGGCACGATTCTCTTAT 57.450 42.857 0.00 0.00 0.00 1.73
421 422 4.804139 ACGATTCTCTTATGCGTTACCAAG 59.196 41.667 0.00 0.00 0.00 3.61
425 426 6.476243 TTCTCTTATGCGTTACCAAGAAAC 57.524 37.500 0.00 0.00 0.00 2.78
428 429 5.064558 TCTTATGCGTTACCAAGAAACCAA 58.935 37.500 0.00 0.00 0.00 3.67
438 439 5.061721 ACCAAGAAACCAAGGTATTCTGT 57.938 39.130 13.58 8.30 33.86 3.41
439 440 4.827284 ACCAAGAAACCAAGGTATTCTGTG 59.173 41.667 13.58 12.94 33.86 3.66
446 447 3.139397 ACCAAGGTATTCTGTGGACCAAA 59.861 43.478 0.00 0.00 35.56 3.28
527 528 3.245122 TGGTAAGATCCAAACCCAACTCC 60.245 47.826 6.33 0.00 34.24 3.85
531 532 2.716424 AGATCCAAACCCAACTCCAGAA 59.284 45.455 0.00 0.00 0.00 3.02
532 533 3.140144 AGATCCAAACCCAACTCCAGAAA 59.860 43.478 0.00 0.00 0.00 2.52
533 534 2.944129 TCCAAACCCAACTCCAGAAAG 58.056 47.619 0.00 0.00 0.00 2.62
534 535 2.512056 TCCAAACCCAACTCCAGAAAGA 59.488 45.455 0.00 0.00 0.00 2.52
535 536 3.053245 TCCAAACCCAACTCCAGAAAGAA 60.053 43.478 0.00 0.00 0.00 2.52
536 537 3.704061 CCAAACCCAACTCCAGAAAGAAA 59.296 43.478 0.00 0.00 0.00 2.52
537 538 4.441495 CCAAACCCAACTCCAGAAAGAAAC 60.441 45.833 0.00 0.00 0.00 2.78
540 541 4.546674 ACCCAACTCCAGAAAGAAACAAT 58.453 39.130 0.00 0.00 0.00 2.71
577 578 8.166422 TGTCGATCAACAGATACATATACAGT 57.834 34.615 0.00 0.00 0.00 3.55
672 683 6.931281 TCGATGATGATCTTGAGGGTTATTTC 59.069 38.462 0.00 0.00 0.00 2.17
679 697 5.477607 TCTTGAGGGTTATTTCGACAAGA 57.522 39.130 0.00 0.00 39.46 3.02
720 745 6.062258 TCTTGAGGGGTAAGATGGTAAAAG 57.938 41.667 0.00 0.00 29.68 2.27
785 810 2.351447 GGCTTTTTCGAAACTGGTAGCC 60.351 50.000 21.24 21.24 39.99 3.93
792 817 1.657822 GAAACTGGTAGCCTGCTAGC 58.342 55.000 18.78 18.78 44.56 3.42
794 819 1.280457 AACTGGTAGCCTGCTAGCTT 58.720 50.000 23.96 11.88 41.41 3.74
909 2834 3.090532 GTTCCATCCCCGCCTCCT 61.091 66.667 0.00 0.00 0.00 3.69
926 2851 0.482887 CCTCCCCCTTCCACAAGTTT 59.517 55.000 0.00 0.00 0.00 2.66
967 2893 0.970427 ACCCAATTCCACCAATCGGC 60.970 55.000 0.00 0.00 34.57 5.54
1422 3348 1.304052 TGGTTCGGGAAGCAATGGG 60.304 57.895 10.57 0.00 44.63 4.00
1542 3468 0.822944 GCGGAGGGGAGGACTACTAC 60.823 65.000 0.00 0.00 0.00 2.73
1585 3511 4.729856 GCGGTTCGTGCGGGTACT 62.730 66.667 0.00 0.00 0.00 2.73
1634 3560 0.400594 GACAAGTACCCCCAGCAGTT 59.599 55.000 0.00 0.00 0.00 3.16
1753 3679 3.272574 TCTGAACTCTGGCATGATTCC 57.727 47.619 0.00 0.00 0.00 3.01
1762 3688 1.837439 TGGCATGATTCCGTAGTTCCT 59.163 47.619 0.00 0.00 0.00 3.36
1768 3694 3.964411 TGATTCCGTAGTTCCTCTCTGA 58.036 45.455 0.00 0.00 0.00 3.27
1782 3709 4.991056 TCCTCTCTGAAATGTTCGAAACAG 59.009 41.667 0.00 5.44 45.95 3.16
1858 3785 0.517316 GGCGTGCTGTTTACCTTCTG 59.483 55.000 0.00 0.00 0.00 3.02
1891 3838 3.991773 CCTGTGATTGCAATTTTGGAGTG 59.008 43.478 14.33 0.00 0.00 3.51
2083 4032 6.639563 TGCATTGTCTGTATTAGAGCTGTAA 58.360 36.000 5.70 5.70 35.70 2.41
2084 4033 7.102993 TGCATTGTCTGTATTAGAGCTGTAAA 58.897 34.615 7.48 0.00 35.70 2.01
2129 4078 6.876789 TCTTGAATCCATAGTAAGCGTTTGAA 59.123 34.615 0.00 0.00 0.00 2.69
2138 4087 7.306866 CCATAGTAAGCGTTTGAATCTTAGCTC 60.307 40.741 0.00 0.00 33.42 4.09
2161 4110 5.905331 TCTGATAGGGTCATTACAATCCTGT 59.095 40.000 0.00 0.00 36.50 4.00
2162 4111 6.386927 TCTGATAGGGTCATTACAATCCTGTT 59.613 38.462 0.00 0.00 35.04 3.16
2166 4115 5.393866 AGGGTCATTACAATCCTGTTTTGT 58.606 37.500 0.00 0.00 40.30 2.83
2199 4148 4.019174 GGGATGAAGATGTGGTGTTGAAT 58.981 43.478 0.00 0.00 0.00 2.57
2206 4155 0.950836 TGTGGTGTTGAATTCGCCTG 59.049 50.000 0.04 0.00 36.54 4.85
2223 4172 2.938756 GCCTGCATGCTAACTGAACTCT 60.939 50.000 20.33 0.00 0.00 3.24
2255 4205 1.270839 TGGTAGCCTCTGTTCTGCAAC 60.271 52.381 0.00 0.00 0.00 4.17
2265 4215 4.454678 TCTGTTCTGCAACTTTGAGATGT 58.545 39.130 0.00 0.00 33.17 3.06
2408 4359 9.590451 TTTAACTACTGTATCCGAACATTTAGG 57.410 33.333 0.00 0.00 0.00 2.69
2479 4430 7.340256 TCAGAGTTTTCACCAGTAAAAACCTA 58.660 34.615 5.80 0.00 43.25 3.08
2853 4832 1.670811 CTACGGGCCTGTAATTGCAAG 59.329 52.381 24.58 9.83 0.00 4.01
2907 4886 5.750067 GCATTTGCATTGGTGTAATCTTAGG 59.250 40.000 0.00 0.00 41.59 2.69
2978 4962 9.672086 TGTATGTTTCTGTTTGTAGTATTTTGC 57.328 29.630 0.00 0.00 0.00 3.68
2985 4969 4.526262 TGTTTGTAGTATTTTGCATGCCCT 59.474 37.500 16.68 3.96 0.00 5.19
3030 5014 8.687242 TGGATCTAGATATATTGGAATGACGAC 58.313 37.037 4.89 0.00 0.00 4.34
3054 5040 6.038825 ACTGTCTCTCTGTATGATAAGTTCCG 59.961 42.308 0.00 0.00 0.00 4.30
3090 5076 3.878699 TGCATTGTCTCATGATTATGCGT 59.121 39.130 18.43 0.00 41.01 5.24
3098 5084 5.009010 GTCTCATGATTATGCGTTTTCCCAT 59.991 40.000 0.00 0.00 34.21 4.00
3126 5112 6.494842 TCATACGGTTCGGTTGTAGTATTAC 58.505 40.000 0.00 0.00 0.00 1.89
3162 5148 5.007682 GTGCTCCAAGGTTTATAGGTTGAA 58.992 41.667 0.00 0.00 0.00 2.69
3622 5629 7.117812 TCGGTTTTCACTGTATCTGATTCTTTC 59.882 37.037 0.00 0.00 0.00 2.62
3815 5827 2.303311 GGGGGCCATCTACTATCTGAAC 59.697 54.545 4.39 0.00 0.00 3.18
3973 6018 7.581011 AAAACTTTGCTGTTTCTAACTGTTG 57.419 32.000 2.69 0.00 38.98 3.33
4003 6049 3.573967 TCCCTTCAGTCAGAAAAATTGGC 59.426 43.478 0.00 0.00 35.40 4.52
4068 6114 3.512724 AGCATCAAGTTTGGGGAATCAAG 59.487 43.478 0.00 0.00 0.00 3.02
4244 6290 1.398390 GCAATCTGTACTCCTTTGCCG 59.602 52.381 10.36 0.00 37.34 5.69
4304 6350 0.249398 ACGGACCTACAATGCCTCAC 59.751 55.000 0.00 0.00 0.00 3.51
4307 6353 2.481449 CGGACCTACAATGCCTCACTAC 60.481 54.545 0.00 0.00 0.00 2.73
4319 6365 2.037251 GCCTCACTACAGTTCAAGGACA 59.963 50.000 6.45 0.00 0.00 4.02
4332 6378 1.537202 CAAGGACAAGCTGCAGTTACC 59.463 52.381 16.64 13.44 0.00 2.85
4340 6386 1.209019 AGCTGCAGTTACCCTCTGATG 59.791 52.381 16.64 0.00 35.20 3.07
4360 6412 2.025981 TGAGCATGTGCCTAGGAATGTT 60.026 45.455 14.75 10.57 43.38 2.71
4384 6436 2.097142 GCAGGCTCTTGATGTCATTGTC 59.903 50.000 0.00 0.00 0.00 3.18
4390 6442 3.996363 CTCTTGATGTCATTGTCCGTCAA 59.004 43.478 10.88 10.88 40.53 3.18
4420 6472 7.449395 TCCAGCTATGAAAAGATTATCATTGGG 59.551 37.037 0.00 0.00 37.46 4.12
4426 6478 5.066375 TGAAAAGATTATCATTGGGCAGACG 59.934 40.000 0.00 0.00 0.00 4.18
4458 6510 3.071023 CCACACTGGTTAGTTCTTGAGGA 59.929 47.826 0.00 0.00 34.07 3.71
4937 6995 1.134220 AGAGAACGGACAAGCCAAACA 60.134 47.619 0.00 0.00 35.94 2.83
5104 7180 5.203060 GGTAACTATTTTGTGTTTGGGCA 57.797 39.130 0.00 0.00 0.00 5.36
5297 7431 6.864685 CAGCAGAACATGTGTGTGAAATAAAT 59.135 34.615 0.00 0.00 38.92 1.40
5298 7432 7.061441 CAGCAGAACATGTGTGTGAAATAAATC 59.939 37.037 0.00 0.00 38.92 2.17
5677 7826 2.393271 ATTTGAAGGCCAGTCTCTCG 57.607 50.000 5.01 0.00 0.00 4.04
5717 7872 2.685106 TTCAGTGGACAGGAGACTCT 57.315 50.000 1.74 0.00 40.21 3.24
5775 7951 6.918022 GCAAGTGCAATAATCTTGGTATTACC 59.082 38.462 13.89 5.87 41.59 2.85
5853 8029 2.159268 GGACAAACTACGTAGGGAGCTC 60.159 54.545 25.63 4.71 0.00 4.09
5856 8032 1.765230 AACTACGTAGGGAGCTCAGG 58.235 55.000 25.63 3.28 0.00 3.86
6141 8320 1.337728 ACACGCTTCATGTTCATCGGA 60.338 47.619 0.00 0.00 0.00 4.55
6248 8427 0.172578 CAGTACGTGCCGAGAATCCA 59.827 55.000 0.00 0.00 0.00 3.41
6401 8580 1.772182 GAGCAGTTCGATATGGTCCG 58.228 55.000 15.14 0.00 37.85 4.79
6405 8584 1.860950 CAGTTCGATATGGTCCGCAAG 59.139 52.381 0.00 0.00 0.00 4.01
6429 8608 3.840666 AGGAGCTAGTGTCCATGAAGAAA 59.159 43.478 13.86 0.00 36.43 2.52
6486 8665 2.357034 GTCGTGGCCAAGAAGCGA 60.357 61.111 23.53 16.97 0.00 4.93
6519 8698 2.158519 ACTGTTCCCCAAGGACGAAAAT 60.159 45.455 0.00 0.00 43.90 1.82
6597 8779 1.736586 CGACCAATCGGAGGAGGAG 59.263 63.158 0.00 0.00 44.99 3.69
6598 8780 1.739338 CGACCAATCGGAGGAGGAGG 61.739 65.000 0.00 0.00 44.99 4.30
6599 8781 0.397254 GACCAATCGGAGGAGGAGGA 60.397 60.000 0.00 0.00 35.59 3.71
6600 8782 0.266152 ACCAATCGGAGGAGGAGGAT 59.734 55.000 0.00 0.00 35.59 3.24
6664 8846 1.280982 CACGCACTACTACATGCTGG 58.719 55.000 0.00 0.00 39.79 4.85
6673 8855 2.945456 ACTACATGCTGGAGGACGATA 58.055 47.619 0.00 0.00 30.79 2.92
6809 8991 4.514577 CCGCGGCAGGGACTACTG 62.515 72.222 14.67 0.00 41.41 2.74
6955 9173 4.087892 CCCTGGAGCACGGTGAGG 62.088 72.222 13.29 9.39 0.00 3.86
7012 9315 2.095263 GTGTACATGCTCGCCAAATTGT 60.095 45.455 0.00 0.00 0.00 2.71
7023 9326 2.605823 CGCCAAATTGTTTCTTACGGCA 60.606 45.455 0.00 0.00 38.20 5.69
7123 9480 7.378728 GCTTGTTACAAACTCATTCTTGTTACC 59.621 37.037 0.00 0.00 35.33 2.85
7251 9609 6.205658 GTGCTGGGAAAGGATATGAGAAATAC 59.794 42.308 0.00 0.00 0.00 1.89
7253 9611 6.429385 GCTGGGAAAGGATATGAGAAATACAG 59.571 42.308 0.00 0.00 0.00 2.74
7484 9867 2.137528 TGACAGGTTGCGGTCAGGA 61.138 57.895 0.00 0.00 39.00 3.86
7731 10114 6.238648 AGTCCGGACTTCAGAATTAAACAAT 58.761 36.000 31.69 3.01 38.83 2.71
7780 10163 8.593492 AAAGGTCAAATGCTTCAAAAAGATAC 57.407 30.769 0.00 0.00 34.14 2.24
7781 10164 7.530426 AGGTCAAATGCTTCAAAAAGATACT 57.470 32.000 0.00 0.00 34.14 2.12
7782 10165 7.597386 AGGTCAAATGCTTCAAAAAGATACTC 58.403 34.615 0.00 0.00 34.14 2.59
7783 10166 6.808704 GGTCAAATGCTTCAAAAAGATACTCC 59.191 38.462 0.00 0.00 34.14 3.85
7784 10167 6.808704 GTCAAATGCTTCAAAAAGATACTCCC 59.191 38.462 0.00 0.00 34.14 4.30
7785 10168 6.721208 TCAAATGCTTCAAAAAGATACTCCCT 59.279 34.615 0.00 0.00 34.14 4.20
7786 10169 7.888021 TCAAATGCTTCAAAAAGATACTCCCTA 59.112 33.333 0.00 0.00 34.14 3.53
7787 10170 7.631717 AATGCTTCAAAAAGATACTCCCTAC 57.368 36.000 0.00 0.00 34.14 3.18
7788 10171 5.175859 TGCTTCAAAAAGATACTCCCTACG 58.824 41.667 0.00 0.00 34.14 3.51
7789 10172 5.176592 GCTTCAAAAAGATACTCCCTACGT 58.823 41.667 0.00 0.00 34.14 3.57
7790 10173 5.291371 GCTTCAAAAAGATACTCCCTACGTC 59.709 44.000 0.00 0.00 34.14 4.34
7791 10174 5.334724 TCAAAAAGATACTCCCTACGTCC 57.665 43.478 0.00 0.00 0.00 4.79
7792 10175 4.110482 CAAAAAGATACTCCCTACGTCCG 58.890 47.826 0.00 0.00 0.00 4.79
7793 10176 3.287867 AAAGATACTCCCTACGTCCGA 57.712 47.619 0.00 0.00 0.00 4.55
7794 10177 3.287867 AAGATACTCCCTACGTCCGAA 57.712 47.619 0.00 0.00 0.00 4.30
7795 10178 3.287867 AGATACTCCCTACGTCCGAAA 57.712 47.619 0.00 0.00 0.00 3.46
7796 10179 3.624777 AGATACTCCCTACGTCCGAAAA 58.375 45.455 0.00 0.00 0.00 2.29
7797 10180 4.213513 AGATACTCCCTACGTCCGAAAAT 58.786 43.478 0.00 0.00 0.00 1.82
7798 10181 5.380043 AGATACTCCCTACGTCCGAAAATA 58.620 41.667 0.00 0.00 0.00 1.40
7799 10182 3.790152 ACTCCCTACGTCCGAAAATAC 57.210 47.619 0.00 0.00 0.00 1.89
7800 10183 3.359950 ACTCCCTACGTCCGAAAATACT 58.640 45.455 0.00 0.00 0.00 2.12
7801 10184 3.379688 ACTCCCTACGTCCGAAAATACTC 59.620 47.826 0.00 0.00 0.00 2.59
7802 10185 2.355756 TCCCTACGTCCGAAAATACTCG 59.644 50.000 0.00 0.00 38.58 4.18
7803 10186 2.098117 CCCTACGTCCGAAAATACTCGT 59.902 50.000 0.00 0.00 37.11 4.18
7804 10187 3.357897 CCTACGTCCGAAAATACTCGTC 58.642 50.000 0.00 0.00 37.11 4.20
7805 10188 1.887320 ACGTCCGAAAATACTCGTCG 58.113 50.000 0.00 0.00 38.89 5.12
7810 10193 2.838386 CGAAAATACTCGTCGGAGGA 57.162 50.000 0.00 0.00 44.93 3.71
7811 10194 3.141002 CGAAAATACTCGTCGGAGGAA 57.859 47.619 1.73 0.00 44.93 3.36
7812 10195 3.703420 CGAAAATACTCGTCGGAGGAAT 58.297 45.455 1.73 0.00 44.93 3.01
7813 10196 3.486108 CGAAAATACTCGTCGGAGGAATG 59.514 47.826 1.73 0.00 44.93 2.67
7814 10197 3.454371 AAATACTCGTCGGAGGAATGG 57.546 47.619 1.73 0.00 44.93 3.16
7815 10198 2.359981 ATACTCGTCGGAGGAATGGA 57.640 50.000 1.73 0.00 44.93 3.41
7816 10199 2.359981 TACTCGTCGGAGGAATGGAT 57.640 50.000 1.73 0.00 44.93 3.41
7817 10200 0.747255 ACTCGTCGGAGGAATGGATG 59.253 55.000 1.73 0.00 44.93 3.51
7818 10201 0.747255 CTCGTCGGAGGAATGGATGT 59.253 55.000 1.73 0.00 36.61 3.06
7819 10202 1.954382 CTCGTCGGAGGAATGGATGTA 59.046 52.381 1.73 0.00 36.61 2.29
7820 10203 2.558795 CTCGTCGGAGGAATGGATGTAT 59.441 50.000 1.73 0.00 36.61 2.29
7821 10204 2.557056 TCGTCGGAGGAATGGATGTATC 59.443 50.000 0.00 0.00 0.00 2.24
7822 10205 2.558795 CGTCGGAGGAATGGATGTATCT 59.441 50.000 0.00 0.00 0.00 1.98
7823 10206 3.756963 CGTCGGAGGAATGGATGTATCTA 59.243 47.826 0.00 0.00 0.00 1.98
7824 10207 4.142578 CGTCGGAGGAATGGATGTATCTAG 60.143 50.000 0.00 0.00 0.00 2.43
7825 10208 5.010933 GTCGGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
7826 10209 5.654650 GTCGGAGGAATGGATGTATCTAGAT 59.345 44.000 10.73 10.73 0.00 1.98
7827 10210 5.654209 TCGGAGGAATGGATGTATCTAGATG 59.346 44.000 15.79 0.00 0.00 2.90
7828 10211 5.420421 CGGAGGAATGGATGTATCTAGATGT 59.580 44.000 15.79 1.25 0.00 3.06
7829 10212 6.603599 CGGAGGAATGGATGTATCTAGATGTA 59.396 42.308 15.79 4.44 0.00 2.29
7830 10213 7.286546 CGGAGGAATGGATGTATCTAGATGTAT 59.713 40.741 15.79 9.11 0.00 2.29
7831 10214 8.986991 GGAGGAATGGATGTATCTAGATGTATT 58.013 37.037 15.79 6.57 0.00 1.89
7867 10250 9.679596 GAACATTCATTTTTATGCATTTCTTCG 57.320 29.630 3.54 0.00 0.00 3.79
7868 10251 8.984891 ACATTCATTTTTATGCATTTCTTCGA 57.015 26.923 3.54 0.00 0.00 3.71
7869 10252 8.863049 ACATTCATTTTTATGCATTTCTTCGAC 58.137 29.630 3.54 0.00 0.00 4.20
7870 10253 8.862074 CATTCATTTTTATGCATTTCTTCGACA 58.138 29.630 3.54 0.00 0.00 4.35
7871 10254 8.809159 TTCATTTTTATGCATTTCTTCGACAA 57.191 26.923 3.54 0.00 0.00 3.18
7872 10255 8.451687 TCATTTTTATGCATTTCTTCGACAAG 57.548 30.769 3.54 0.00 0.00 3.16
7873 10256 8.081633 TCATTTTTATGCATTTCTTCGACAAGT 58.918 29.630 3.54 0.00 0.00 3.16
7874 10257 9.340695 CATTTTTATGCATTTCTTCGACAAGTA 57.659 29.630 3.54 0.00 0.00 2.24
7876 10259 9.906660 TTTTTATGCATTTCTTCGACAAGTATT 57.093 25.926 3.54 0.00 0.00 1.89
7877 10260 9.906660 TTTTATGCATTTCTTCGACAAGTATTT 57.093 25.926 3.54 0.00 0.00 1.40
7878 10261 9.554724 TTTATGCATTTCTTCGACAAGTATTTC 57.445 29.630 3.54 0.00 0.00 2.17
7879 10262 5.938322 TGCATTTCTTCGACAAGTATTTCC 58.062 37.500 0.00 0.00 0.00 3.13
7880 10263 5.022021 GCATTTCTTCGACAAGTATTTCCG 58.978 41.667 0.00 0.00 0.00 4.30
7881 10264 5.560148 CATTTCTTCGACAAGTATTTCCGG 58.440 41.667 0.00 0.00 0.00 5.14
7882 10265 4.524316 TTCTTCGACAAGTATTTCCGGA 57.476 40.909 0.00 0.00 0.00 5.14
7883 10266 3.841643 TCTTCGACAAGTATTTCCGGAC 58.158 45.455 1.83 0.00 0.00 4.79
7884 10267 2.267188 TCGACAAGTATTTCCGGACG 57.733 50.000 1.83 0.27 0.00 4.79
7885 10268 1.135315 TCGACAAGTATTTCCGGACGG 60.135 52.381 1.83 3.96 0.00 4.79
7886 10269 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
7887 10270 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
7888 10271 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
7889 10272 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
7890 10273 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
7891 10274 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
7892 10275 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
7893 10276 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
7894 10277 0.032813 TTTCCGGACGGAGGGAGTAT 60.033 55.000 13.64 0.00 46.06 2.12
7895 10278 0.466922 TTCCGGACGGAGGGAGTATC 60.467 60.000 13.64 0.00 46.06 2.24
7896 10279 1.152819 CCGGACGGAGGGAGTATCA 60.153 63.158 4.40 0.00 34.77 2.15
7897 10280 0.754217 CCGGACGGAGGGAGTATCAA 60.754 60.000 4.40 0.00 34.77 2.57
7898 10281 1.108776 CGGACGGAGGGAGTATCAAA 58.891 55.000 0.00 0.00 36.25 2.69
7899 10282 1.202382 CGGACGGAGGGAGTATCAAAC 60.202 57.143 0.00 0.00 36.25 2.93
7900 10283 1.829222 GGACGGAGGGAGTATCAAACA 59.171 52.381 0.00 0.00 36.25 2.83
7901 10284 2.434702 GGACGGAGGGAGTATCAAACAT 59.565 50.000 0.00 0.00 36.25 2.71
7902 10285 3.640029 GGACGGAGGGAGTATCAAACATA 59.360 47.826 0.00 0.00 36.25 2.29
7903 10286 4.100498 GGACGGAGGGAGTATCAAACATAA 59.900 45.833 0.00 0.00 36.25 1.90
7904 10287 5.277857 ACGGAGGGAGTATCAAACATAAG 57.722 43.478 0.00 0.00 36.25 1.73
7905 10288 4.715297 ACGGAGGGAGTATCAAACATAAGT 59.285 41.667 0.00 0.00 36.25 2.24
7906 10289 5.189145 ACGGAGGGAGTATCAAACATAAGTT 59.811 40.000 0.00 0.00 40.40 2.66
7908 10291 6.258068 CGGAGGGAGTATCAAACATAAGTTTC 59.742 42.308 0.00 0.00 45.80 2.78
7909 10292 7.339482 GGAGGGAGTATCAAACATAAGTTTCT 58.661 38.462 0.00 0.00 45.80 2.52
7910 10293 7.496263 GGAGGGAGTATCAAACATAAGTTTCTC 59.504 40.741 0.00 0.00 45.80 2.87
7911 10294 8.152023 AGGGAGTATCAAACATAAGTTTCTCT 57.848 34.615 8.83 0.00 45.80 3.10
7912 10295 8.606830 AGGGAGTATCAAACATAAGTTTCTCTT 58.393 33.333 8.83 0.00 45.80 2.85
7913 10296 9.232473 GGGAGTATCAAACATAAGTTTCTCTTT 57.768 33.333 8.83 0.00 45.80 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.952030 ATTTTGACATTTATAAAACGGGGAATT 57.048 25.926 1.21 0.00 0.00 2.17
9 10 9.952030 AATTTTGACATTTATAAAACGGGGAAT 57.048 25.926 1.21 0.00 0.00 3.01
50 51 9.674824 CCATGATATGTTTCAGCTATTTTCTTC 57.325 33.333 0.00 0.00 0.00 2.87
51 52 8.139989 GCCATGATATGTTTCAGCTATTTTCTT 58.860 33.333 0.00 0.00 0.00 2.52
52 53 7.286087 TGCCATGATATGTTTCAGCTATTTTCT 59.714 33.333 0.00 0.00 0.00 2.52
53 54 7.428020 TGCCATGATATGTTTCAGCTATTTTC 58.572 34.615 0.00 0.00 0.00 2.29
54 55 7.350744 TGCCATGATATGTTTCAGCTATTTT 57.649 32.000 0.00 0.00 0.00 1.82
55 56 6.964807 TGCCATGATATGTTTCAGCTATTT 57.035 33.333 0.00 0.00 0.00 1.40
56 57 6.548622 AGTTGCCATGATATGTTTCAGCTATT 59.451 34.615 0.00 0.00 0.00 1.73
57 58 6.066690 AGTTGCCATGATATGTTTCAGCTAT 58.933 36.000 0.00 0.00 0.00 2.97
60 61 4.644103 AGTTGCCATGATATGTTTCAGC 57.356 40.909 0.00 0.00 0.00 4.26
61 62 6.127814 ACTGAAGTTGCCATGATATGTTTCAG 60.128 38.462 16.88 16.88 42.68 3.02
62 63 5.711506 ACTGAAGTTGCCATGATATGTTTCA 59.288 36.000 0.00 0.00 0.00 2.69
63 64 6.032094 CACTGAAGTTGCCATGATATGTTTC 58.968 40.000 0.00 0.00 0.00 2.78
64 65 5.477984 ACACTGAAGTTGCCATGATATGTTT 59.522 36.000 0.00 0.00 0.00 2.83
65 66 5.012239 ACACTGAAGTTGCCATGATATGTT 58.988 37.500 0.00 0.00 0.00 2.71
68 69 6.886459 AGTTTACACTGAAGTTGCCATGATAT 59.114 34.615 0.00 0.00 0.00 1.63
70 71 5.072741 AGTTTACACTGAAGTTGCCATGAT 58.927 37.500 0.00 0.00 0.00 2.45
72 73 4.836125 AGTTTACACTGAAGTTGCCATG 57.164 40.909 0.00 0.00 0.00 3.66
73 74 4.887071 TGAAGTTTACACTGAAGTTGCCAT 59.113 37.500 0.00 0.00 31.60 4.40
74 75 4.265893 TGAAGTTTACACTGAAGTTGCCA 58.734 39.130 0.00 0.00 31.60 4.92
75 76 4.893424 TGAAGTTTACACTGAAGTTGCC 57.107 40.909 0.00 0.00 31.60 4.52
76 77 5.215160 CCATGAAGTTTACACTGAAGTTGC 58.785 41.667 0.00 0.00 31.60 4.17
77 78 5.215160 GCCATGAAGTTTACACTGAAGTTG 58.785 41.667 0.00 0.00 31.60 3.16
78 79 4.887071 TGCCATGAAGTTTACACTGAAGTT 59.113 37.500 0.00 0.00 31.60 2.66
81 82 6.040278 TGAATTGCCATGAAGTTTACACTGAA 59.960 34.615 0.00 0.00 31.60 3.02
82 83 5.534278 TGAATTGCCATGAAGTTTACACTGA 59.466 36.000 0.00 0.00 31.60 3.41
83 84 5.771469 TGAATTGCCATGAAGTTTACACTG 58.229 37.500 0.00 0.00 31.60 3.66
84 85 6.594788 ATGAATTGCCATGAAGTTTACACT 57.405 33.333 0.00 0.00 33.11 3.55
85 86 7.975616 ACATATGAATTGCCATGAAGTTTACAC 59.024 33.333 10.38 0.00 0.00 2.90
91 92 9.797642 TCTATTACATATGAATTGCCATGAAGT 57.202 29.630 10.38 0.00 0.00 3.01
93 94 9.571816 TGTCTATTACATATGAATTGCCATGAA 57.428 29.630 10.38 0.00 31.43 2.57
109 110 8.682710 GGATTAAAAGTTGCCATGTCTATTACA 58.317 33.333 0.00 0.00 43.86 2.41
110 111 8.682710 TGGATTAAAAGTTGCCATGTCTATTAC 58.317 33.333 0.00 0.00 0.00 1.89
111 112 8.815565 TGGATTAAAAGTTGCCATGTCTATTA 57.184 30.769 0.00 0.00 0.00 0.98
112 113 7.716799 TGGATTAAAAGTTGCCATGTCTATT 57.283 32.000 0.00 0.00 0.00 1.73
113 114 7.716799 TTGGATTAAAAGTTGCCATGTCTAT 57.283 32.000 0.00 0.00 0.00 1.98
115 116 6.418057 TTTGGATTAAAAGTTGCCATGTCT 57.582 33.333 0.00 0.00 0.00 3.41
142 143 9.386010 CCCATGTTGATATGTTTTGATGAAATT 57.614 29.630 0.00 0.00 0.00 1.82
143 144 8.760735 TCCCATGTTGATATGTTTTGATGAAAT 58.239 29.630 0.00 0.00 0.00 2.17
144 145 8.131847 TCCCATGTTGATATGTTTTGATGAAA 57.868 30.769 0.00 0.00 0.00 2.69
146 147 7.781219 AGATCCCATGTTGATATGTTTTGATGA 59.219 33.333 0.00 0.00 0.00 2.92
147 148 7.948357 AGATCCCATGTTGATATGTTTTGATG 58.052 34.615 0.00 0.00 0.00 3.07
148 149 9.293404 CTAGATCCCATGTTGATATGTTTTGAT 57.707 33.333 0.00 0.00 0.00 2.57
149 150 8.274322 ACTAGATCCCATGTTGATATGTTTTGA 58.726 33.333 0.00 0.00 0.00 2.69
150 151 8.455903 ACTAGATCCCATGTTGATATGTTTTG 57.544 34.615 0.00 0.00 0.00 2.44
151 152 9.479549 AAACTAGATCCCATGTTGATATGTTTT 57.520 29.630 0.00 0.00 0.00 2.43
152 153 9.125026 GAAACTAGATCCCATGTTGATATGTTT 57.875 33.333 0.00 13.42 0.00 2.83
153 154 7.442364 CGAAACTAGATCCCATGTTGATATGTT 59.558 37.037 0.00 0.00 0.00 2.71
154 155 6.931281 CGAAACTAGATCCCATGTTGATATGT 59.069 38.462 0.00 0.00 0.00 2.29
155 156 7.154656 TCGAAACTAGATCCCATGTTGATATG 58.845 38.462 0.00 0.00 0.00 1.78
156 157 7.303182 TCGAAACTAGATCCCATGTTGATAT 57.697 36.000 0.00 0.00 0.00 1.63
158 159 5.614324 TCGAAACTAGATCCCATGTTGAT 57.386 39.130 0.00 0.00 0.00 2.57
160 161 5.419542 TCTTCGAAACTAGATCCCATGTTG 58.580 41.667 0.00 0.00 0.00 3.33
161 162 5.677319 TCTTCGAAACTAGATCCCATGTT 57.323 39.130 0.00 0.00 0.00 2.71
162 163 5.600484 AGATCTTCGAAACTAGATCCCATGT 59.400 40.000 17.33 1.02 45.05 3.21
163 164 6.095432 AGATCTTCGAAACTAGATCCCATG 57.905 41.667 17.33 0.00 45.05 3.66
164 165 5.835819 TGAGATCTTCGAAACTAGATCCCAT 59.164 40.000 17.33 3.79 45.05 4.00
165 166 5.201243 TGAGATCTTCGAAACTAGATCCCA 58.799 41.667 17.33 11.57 45.05 4.37
166 167 5.776173 TGAGATCTTCGAAACTAGATCCC 57.224 43.478 17.33 9.47 45.05 3.85
168 169 5.567534 GCGATGAGATCTTCGAAACTAGATC 59.432 44.000 18.67 14.39 44.54 2.75
169 170 5.457140 GCGATGAGATCTTCGAAACTAGAT 58.543 41.667 18.67 0.00 43.48 1.98
171 172 3.661728 CGCGATGAGATCTTCGAAACTAG 59.338 47.826 18.67 0.00 43.48 2.57
172 173 3.311596 TCGCGATGAGATCTTCGAAACTA 59.688 43.478 18.67 0.00 43.48 2.24
173 174 2.097629 TCGCGATGAGATCTTCGAAACT 59.902 45.455 18.67 0.00 43.48 2.66
174 175 2.451132 TCGCGATGAGATCTTCGAAAC 58.549 47.619 18.67 2.75 43.48 2.78
175 176 2.844122 TCGCGATGAGATCTTCGAAA 57.156 45.000 18.67 4.66 43.48 3.46
185 186 2.738846 CCATTAAATCCCTCGCGATGAG 59.261 50.000 10.36 0.80 44.83 2.90
186 187 2.104111 ACCATTAAATCCCTCGCGATGA 59.896 45.455 10.36 10.40 0.00 2.92
187 188 2.224079 CACCATTAAATCCCTCGCGATG 59.776 50.000 10.36 6.89 0.00 3.84
188 189 2.104111 TCACCATTAAATCCCTCGCGAT 59.896 45.455 10.36 0.00 0.00 4.58
190 191 1.948104 TCACCATTAAATCCCTCGCG 58.052 50.000 0.00 0.00 0.00 5.87
191 192 4.421058 GTTTTCACCATTAAATCCCTCGC 58.579 43.478 0.00 0.00 0.00 5.03
192 193 4.438200 CCGTTTTCACCATTAAATCCCTCG 60.438 45.833 0.00 0.00 0.00 4.63
193 194 4.703093 TCCGTTTTCACCATTAAATCCCTC 59.297 41.667 0.00 0.00 0.00 4.30
195 196 5.592104 ATCCGTTTTCACCATTAAATCCC 57.408 39.130 0.00 0.00 0.00 3.85
209 210 7.439655 TGAAAAATCCGATTGAAAATCCGTTTT 59.560 29.630 0.00 0.00 40.13 2.43
211 212 6.451393 TGAAAAATCCGATTGAAAATCCGTT 58.549 32.000 0.00 0.00 0.00 4.44
212 213 6.019779 TGAAAAATCCGATTGAAAATCCGT 57.980 33.333 0.00 0.00 0.00 4.69
213 214 7.524294 AATGAAAAATCCGATTGAAAATCCG 57.476 32.000 0.00 0.00 0.00 4.18
256 257 9.685276 AGGAATCTTTTTGGATTTTCAGTTTTT 57.315 25.926 0.00 0.00 36.24 1.94
257 258 9.112725 CAGGAATCTTTTTGGATTTTCAGTTTT 57.887 29.630 0.00 0.00 36.24 2.43
258 259 7.227314 GCAGGAATCTTTTTGGATTTTCAGTTT 59.773 33.333 0.00 0.00 36.24 2.66
259 260 6.707608 GCAGGAATCTTTTTGGATTTTCAGTT 59.292 34.615 0.00 0.00 36.24 3.16
260 261 6.183360 TGCAGGAATCTTTTTGGATTTTCAGT 60.183 34.615 0.00 0.00 36.24 3.41
261 262 6.225318 TGCAGGAATCTTTTTGGATTTTCAG 58.775 36.000 0.00 0.00 36.24 3.02
262 263 6.172136 TGCAGGAATCTTTTTGGATTTTCA 57.828 33.333 0.00 0.00 36.24 2.69
263 264 6.402875 GCATGCAGGAATCTTTTTGGATTTTC 60.403 38.462 14.21 0.00 36.24 2.29
264 265 5.413523 GCATGCAGGAATCTTTTTGGATTTT 59.586 36.000 14.21 0.00 36.24 1.82
265 266 4.939439 GCATGCAGGAATCTTTTTGGATTT 59.061 37.500 14.21 0.00 36.24 2.17
266 267 4.020039 TGCATGCAGGAATCTTTTTGGATT 60.020 37.500 18.46 0.00 38.47 3.01
267 268 3.516300 TGCATGCAGGAATCTTTTTGGAT 59.484 39.130 18.46 0.00 0.00 3.41
268 269 2.898612 TGCATGCAGGAATCTTTTTGGA 59.101 40.909 18.46 0.00 0.00 3.53
269 270 3.322211 TGCATGCAGGAATCTTTTTGG 57.678 42.857 18.46 0.00 0.00 3.28
270 271 4.857871 CATGCATGCAGGAATCTTTTTG 57.142 40.909 27.49 11.28 0.00 2.44
288 289 1.010462 CCACGTCATCGCATGCATG 60.010 57.895 22.70 22.70 41.18 4.06
289 290 2.827051 GCCACGTCATCGCATGCAT 61.827 57.895 19.57 7.64 41.18 3.96
290 291 3.498834 GCCACGTCATCGCATGCA 61.499 61.111 19.57 5.34 41.18 3.96
291 292 2.327002 ATTGCCACGTCATCGCATGC 62.327 55.000 7.91 7.91 41.18 4.06
292 293 0.316442 GATTGCCACGTCATCGCATG 60.316 55.000 0.00 0.00 41.18 4.06
293 294 0.462581 AGATTGCCACGTCATCGCAT 60.463 50.000 0.00 0.00 41.18 4.73
294 295 1.079197 AGATTGCCACGTCATCGCA 60.079 52.632 0.00 0.00 41.18 5.10
295 296 1.349627 CAGATTGCCACGTCATCGC 59.650 57.895 0.00 0.00 41.18 4.58
296 297 1.078709 AACAGATTGCCACGTCATCG 58.921 50.000 0.00 0.00 43.34 3.84
297 298 3.435327 TGTAAACAGATTGCCACGTCATC 59.565 43.478 0.00 0.00 0.00 2.92
298 299 3.407698 TGTAAACAGATTGCCACGTCAT 58.592 40.909 0.00 0.00 0.00 3.06
299 300 2.839975 TGTAAACAGATTGCCACGTCA 58.160 42.857 0.00 0.00 0.00 4.35
300 301 4.419522 AATGTAAACAGATTGCCACGTC 57.580 40.909 0.00 0.00 0.00 4.34
301 302 5.242434 TCTAATGTAAACAGATTGCCACGT 58.758 37.500 0.00 0.00 0.00 4.49
302 303 5.580691 TCTCTAATGTAAACAGATTGCCACG 59.419 40.000 0.00 0.00 0.00 4.94
303 304 6.455646 CGTCTCTAATGTAAACAGATTGCCAC 60.456 42.308 0.00 0.00 0.00 5.01
304 305 5.580691 CGTCTCTAATGTAAACAGATTGCCA 59.419 40.000 0.00 0.00 0.00 4.92
305 306 5.581085 ACGTCTCTAATGTAAACAGATTGCC 59.419 40.000 0.00 0.00 0.00 4.52
306 307 6.090898 ACACGTCTCTAATGTAAACAGATTGC 59.909 38.462 0.00 0.00 0.00 3.56
307 308 7.411912 CCACACGTCTCTAATGTAAACAGATTG 60.412 40.741 0.00 0.00 0.00 2.67
308 309 6.590292 CCACACGTCTCTAATGTAAACAGATT 59.410 38.462 0.00 0.00 0.00 2.40
309 310 6.100004 CCACACGTCTCTAATGTAAACAGAT 58.900 40.000 0.00 0.00 0.00 2.90
310 311 5.010314 ACCACACGTCTCTAATGTAAACAGA 59.990 40.000 0.00 0.00 0.00 3.41
311 312 5.118664 CACCACACGTCTCTAATGTAAACAG 59.881 44.000 0.00 0.00 0.00 3.16
312 313 4.986034 CACCACACGTCTCTAATGTAAACA 59.014 41.667 0.00 0.00 0.00 2.83
313 314 4.143179 GCACCACACGTCTCTAATGTAAAC 60.143 45.833 0.00 0.00 0.00 2.01
314 315 3.991773 GCACCACACGTCTCTAATGTAAA 59.008 43.478 0.00 0.00 0.00 2.01
315 316 3.581755 GCACCACACGTCTCTAATGTAA 58.418 45.455 0.00 0.00 0.00 2.41
316 317 2.414957 CGCACCACACGTCTCTAATGTA 60.415 50.000 0.00 0.00 0.00 2.29
317 318 1.668919 CGCACCACACGTCTCTAATGT 60.669 52.381 0.00 0.00 0.00 2.71
318 319 0.992072 CGCACCACACGTCTCTAATG 59.008 55.000 0.00 0.00 0.00 1.90
319 320 0.601558 ACGCACCACACGTCTCTAAT 59.398 50.000 0.00 0.00 40.28 1.73
320 321 0.386476 AACGCACCACACGTCTCTAA 59.614 50.000 0.00 0.00 44.30 2.10
321 322 0.386476 AAACGCACCACACGTCTCTA 59.614 50.000 0.00 0.00 44.30 2.43
322 323 0.874607 GAAACGCACCACACGTCTCT 60.875 55.000 0.00 0.00 44.30 3.10
323 324 1.563173 GAAACGCACCACACGTCTC 59.437 57.895 0.00 0.00 44.30 3.36
324 325 1.885850 GGAAACGCACCACACGTCT 60.886 57.895 0.00 0.00 44.30 4.18
325 326 2.629763 GGAAACGCACCACACGTC 59.370 61.111 0.00 0.00 44.30 4.34
327 328 2.113131 GAAGGGAAACGCACCACACG 62.113 60.000 0.00 0.00 0.00 4.49
328 329 1.652563 GAAGGGAAACGCACCACAC 59.347 57.895 0.00 0.00 0.00 3.82
329 330 1.890041 CGAAGGGAAACGCACCACA 60.890 57.895 0.00 0.00 0.00 4.17
330 331 1.890510 ACGAAGGGAAACGCACCAC 60.891 57.895 0.00 0.00 0.00 4.16
331 332 1.890041 CACGAAGGGAAACGCACCA 60.890 57.895 0.00 0.00 0.00 4.17
332 333 2.943653 CACGAAGGGAAACGCACC 59.056 61.111 0.00 0.00 0.00 5.01
333 334 2.251371 GCACGAAGGGAAACGCAC 59.749 61.111 0.00 0.00 0.00 5.34
334 335 2.975799 GGCACGAAGGGAAACGCA 60.976 61.111 0.00 0.00 0.00 5.24
335 336 2.975799 TGGCACGAAGGGAAACGC 60.976 61.111 0.00 0.00 0.00 4.84
336 337 1.890041 TGTGGCACGAAGGGAAACG 60.890 57.895 13.77 0.00 0.00 3.60
337 338 1.652563 GTGTGGCACGAAGGGAAAC 59.347 57.895 13.77 0.00 0.00 2.78
338 339 4.150994 GTGTGGCACGAAGGGAAA 57.849 55.556 13.77 0.00 0.00 3.13
351 352 1.569493 GCTAACTGCCACACGTGTG 59.431 57.895 36.13 36.13 45.23 3.82
352 353 1.954146 CGCTAACTGCCACACGTGT 60.954 57.895 17.22 17.22 38.78 4.49
353 354 2.853210 CGCTAACTGCCACACGTG 59.147 61.111 15.48 15.48 38.78 4.49
354 355 3.041940 GCGCTAACTGCCACACGT 61.042 61.111 0.00 0.00 38.78 4.49
355 356 4.134187 CGCGCTAACTGCCACACG 62.134 66.667 5.56 0.00 38.78 4.49
356 357 2.736995 TCGCGCTAACTGCCACAC 60.737 61.111 5.56 0.00 38.78 3.82
357 358 2.736995 GTCGCGCTAACTGCCACA 60.737 61.111 5.56 0.00 38.78 4.17
358 359 3.488090 GGTCGCGCTAACTGCCAC 61.488 66.667 5.56 0.00 38.78 5.01
359 360 4.752879 GGGTCGCGCTAACTGCCA 62.753 66.667 5.56 0.00 38.78 4.92
360 361 3.952628 AAGGGTCGCGCTAACTGCC 62.953 63.158 5.56 1.49 38.78 4.85
361 362 1.574702 AAAAGGGTCGCGCTAACTGC 61.575 55.000 5.56 0.00 38.57 4.40
362 363 0.872388 AAAAAGGGTCGCGCTAACTG 59.128 50.000 5.56 0.00 0.00 3.16
363 364 1.154197 GAAAAAGGGTCGCGCTAACT 58.846 50.000 5.56 0.00 0.00 2.24
364 365 1.154197 AGAAAAAGGGTCGCGCTAAC 58.846 50.000 5.56 3.16 0.00 2.34
365 366 1.886886 AAGAAAAAGGGTCGCGCTAA 58.113 45.000 5.56 0.00 0.00 3.09
366 367 2.747396 TAAGAAAAAGGGTCGCGCTA 57.253 45.000 5.56 0.00 0.00 4.26
367 368 1.886886 TTAAGAAAAAGGGTCGCGCT 58.113 45.000 5.56 0.00 0.00 5.92
368 369 2.160813 TCATTAAGAAAAAGGGTCGCGC 59.839 45.455 0.00 0.00 0.00 6.86
369 370 4.403453 CTTCATTAAGAAAAAGGGTCGCG 58.597 43.478 0.00 0.00 35.40 5.87
370 371 4.166523 GCTTCATTAAGAAAAAGGGTCGC 58.833 43.478 0.00 0.00 35.40 5.19
371 372 5.371115 TGCTTCATTAAGAAAAAGGGTCG 57.629 39.130 0.00 0.00 35.40 4.79
372 373 6.159293 CCTTGCTTCATTAAGAAAAAGGGTC 58.841 40.000 13.84 0.00 41.79 4.46
373 374 5.511373 GCCTTGCTTCATTAAGAAAAAGGGT 60.511 40.000 18.22 0.00 43.68 4.34
374 375 4.931601 GCCTTGCTTCATTAAGAAAAAGGG 59.068 41.667 18.22 1.16 43.68 3.95
375 376 5.406477 GTGCCTTGCTTCATTAAGAAAAAGG 59.594 40.000 15.52 15.52 44.95 3.11
376 377 5.117592 CGTGCCTTGCTTCATTAAGAAAAAG 59.882 40.000 0.00 0.00 35.40 2.27
377 378 4.981674 CGTGCCTTGCTTCATTAAGAAAAA 59.018 37.500 0.00 0.00 35.40 1.94
378 379 4.277174 TCGTGCCTTGCTTCATTAAGAAAA 59.723 37.500 0.00 0.00 35.40 2.29
379 380 3.818210 TCGTGCCTTGCTTCATTAAGAAA 59.182 39.130 0.00 0.00 35.40 2.52
380 381 3.407698 TCGTGCCTTGCTTCATTAAGAA 58.592 40.909 0.00 0.00 34.37 2.52
381 382 3.052455 TCGTGCCTTGCTTCATTAAGA 57.948 42.857 0.00 0.00 34.37 2.10
393 394 2.205074 CGCATAAGAGAATCGTGCCTT 58.795 47.619 0.00 0.00 42.67 4.35
400 401 6.903883 TTCTTGGTAACGCATAAGAGAATC 57.096 37.500 0.00 0.00 42.51 2.52
410 411 1.950909 CCTTGGTTTCTTGGTAACGCA 59.049 47.619 0.00 0.00 42.51 5.24
421 422 3.756963 GGTCCACAGAATACCTTGGTTTC 59.243 47.826 0.00 2.67 0.00 2.78
425 426 3.433306 TTGGTCCACAGAATACCTTGG 57.567 47.619 0.00 0.00 34.23 3.61
428 429 4.042809 TGATGTTTGGTCCACAGAATACCT 59.957 41.667 0.00 0.00 34.23 3.08
438 439 2.916269 TGGTCCTATGATGTTTGGTCCA 59.084 45.455 0.00 0.00 35.91 4.02
439 440 3.644966 TGGTCCTATGATGTTTGGTCC 57.355 47.619 0.00 0.00 0.00 4.46
446 447 6.329986 TCAAAGGTCATATGGTCCTATGATGT 59.670 38.462 16.64 2.71 39.60 3.06
672 683 5.986135 TCCTCTTCTTTCTTTTCTCTTGTCG 59.014 40.000 0.00 0.00 0.00 4.35
679 697 7.167535 CCTCAAGATCCTCTTCTTTCTTTTCT 58.832 38.462 0.00 0.00 33.78 2.52
720 745 3.467119 CGCGTACACACAGACCGC 61.467 66.667 0.00 0.00 40.87 5.68
755 780 1.337118 TCGAAAAAGCCCATTTGCCT 58.663 45.000 0.00 0.00 0.00 4.75
767 792 2.292292 GCAGGCTACCAGTTTCGAAAAA 59.708 45.455 13.10 0.00 0.00 1.94
768 793 1.877443 GCAGGCTACCAGTTTCGAAAA 59.123 47.619 13.10 0.00 0.00 2.29
769 794 1.071699 AGCAGGCTACCAGTTTCGAAA 59.928 47.619 6.47 6.47 0.00 3.46
770 795 0.685097 AGCAGGCTACCAGTTTCGAA 59.315 50.000 0.00 0.00 0.00 3.71
785 810 2.369394 CCCCTGGTTTTAAGCTAGCAG 58.631 52.381 18.83 6.46 39.08 4.24
909 2834 0.187361 CCAAACTTGTGGAAGGGGGA 59.813 55.000 0.00 0.00 41.65 4.81
1059 2985 3.234730 CCGCCGCCCCTCTTATCT 61.235 66.667 0.00 0.00 0.00 1.98
1487 3413 4.929707 CATAAGGCCCGCCGACCC 62.930 72.222 0.00 0.00 41.95 4.46
1490 3416 3.546543 CTCCATAAGGCCCGCCGA 61.547 66.667 0.00 0.00 41.95 5.54
1503 3429 2.445845 CGGCCCTGGTATCCTCCA 60.446 66.667 0.00 0.00 36.00 3.86
1542 3468 3.136123 CCGTGCCATCTGCTTGGG 61.136 66.667 3.61 0.00 42.00 4.12
1753 3679 4.559251 CGAACATTTCAGAGAGGAACTACG 59.441 45.833 0.00 0.00 41.55 3.51
1762 3688 4.065088 CCCTGTTTCGAACATTTCAGAGA 58.935 43.478 0.00 0.00 41.26 3.10
1768 3694 0.966179 GGCCCCTGTTTCGAACATTT 59.034 50.000 0.00 0.00 41.26 2.32
1858 3785 2.479560 GCAATCACAGGCCCGTAATTTC 60.480 50.000 0.00 0.00 0.00 2.17
1891 3838 1.922135 ATCACACCGACGCAAATGCC 61.922 55.000 0.00 0.00 37.91 4.40
2118 4067 5.720202 TCAGAGCTAAGATTCAAACGCTTA 58.280 37.500 0.00 0.00 0.00 3.09
2129 4078 7.013220 TGTAATGACCCTATCAGAGCTAAGAT 58.987 38.462 5.77 5.77 41.91 2.40
2138 4087 6.179906 ACAGGATTGTAATGACCCTATCAG 57.820 41.667 0.00 0.00 36.84 2.90
2161 4110 7.390027 TCTTCATCCCAGTTTTTCAAACAAAA 58.610 30.769 2.38 0.00 0.00 2.44
2162 4111 6.940739 TCTTCATCCCAGTTTTTCAAACAAA 58.059 32.000 2.38 0.00 0.00 2.83
2166 4115 6.462768 CCACATCTTCATCCCAGTTTTTCAAA 60.463 38.462 0.00 0.00 0.00 2.69
2175 4124 2.751259 CAACACCACATCTTCATCCCAG 59.249 50.000 0.00 0.00 0.00 4.45
2199 4148 0.036483 TCAGTTAGCATGCAGGCGAA 60.036 50.000 21.98 16.77 39.27 4.70
2206 4155 6.073003 ACAGTTTAAGAGTTCAGTTAGCATGC 60.073 38.462 10.51 10.51 0.00 4.06
2223 4172 4.819630 CAGAGGCTACCAACAACAGTTTAA 59.180 41.667 0.00 0.00 0.00 1.52
2265 4215 5.477637 TGCATCCTCTCAAACAATCATTTGA 59.522 36.000 1.36 1.36 44.40 2.69
2853 4832 2.548875 TCAGCATGCAACCAACAAAAC 58.451 42.857 21.98 0.00 34.76 2.43
2907 4886 9.643693 ATGACCATGATCAAAATAAGAAACAAC 57.356 29.630 0.00 0.00 30.82 3.32
2978 4962 1.766494 TTGGAGCACATTAGGGCATG 58.234 50.000 0.00 0.00 0.00 4.06
3027 5011 6.612247 ACTTATCATACAGAGAGACAGTCG 57.388 41.667 0.00 0.00 0.00 4.18
3030 5014 6.038825 ACGGAACTTATCATACAGAGAGACAG 59.961 42.308 0.00 0.00 0.00 3.51
3090 5076 4.083217 CGAACCGTATGAAACATGGGAAAA 60.083 41.667 0.00 0.00 0.00 2.29
3098 5084 2.836262 ACAACCGAACCGTATGAAACA 58.164 42.857 0.00 0.00 0.00 2.83
3126 5112 0.940126 GGAGCACACATAGGCATTCG 59.060 55.000 0.00 0.00 0.00 3.34
3263 5249 6.881065 TGGATTCAAGACACAAGAGAATAAGG 59.119 38.462 0.00 0.00 0.00 2.69
3395 5383 8.456471 GGAACAGAGTTTACTAACAACAGTTTT 58.544 33.333 0.00 0.00 36.70 2.43
3676 5686 4.735578 GCATGAAGCAACCGATCAATTGAT 60.736 41.667 20.85 20.85 44.79 2.57
3815 5827 4.537015 GGAAATCACTCAACGTTTCCAAG 58.463 43.478 0.00 0.00 45.57 3.61
3973 6018 4.086706 TCTGACTGAAGGGAGGAAAAAC 57.913 45.455 0.00 0.00 0.00 2.43
4003 6049 3.519510 TGACTTCTACCTCTTCAATGGGG 59.480 47.826 0.00 0.00 0.00 4.96
4193 6239 6.405508 CCATCAGAAGCAACAGCTAATGAATT 60.406 38.462 8.11 0.00 37.72 2.17
4244 6290 3.017442 GGGATAAACCTTCTGGCAGTTC 58.983 50.000 15.27 0.00 38.98 3.01
4304 6350 2.481952 GCAGCTTGTCCTTGAACTGTAG 59.518 50.000 0.00 0.00 0.00 2.74
4307 6353 1.266175 CTGCAGCTTGTCCTTGAACTG 59.734 52.381 0.00 0.00 0.00 3.16
4319 6365 1.352083 TCAGAGGGTAACTGCAGCTT 58.648 50.000 15.27 10.05 35.61 3.74
4332 6378 0.180642 AGGCACATGCTCATCAGAGG 59.819 55.000 3.48 0.00 42.33 3.69
4340 6386 2.338577 ACATTCCTAGGCACATGCTC 57.661 50.000 2.96 0.00 41.70 4.26
4360 6412 2.275134 TGACATCAAGAGCCTGCAAA 57.725 45.000 0.00 0.00 0.00 3.68
4420 6472 4.032900 CAGTGTGGTGAATATAACGTCTGC 59.967 45.833 0.00 0.00 0.00 4.26
4458 6510 4.305539 TGGACATGAACATGATTGGAGT 57.694 40.909 19.56 0.00 41.20 3.85
4937 6995 2.795329 ACAAAGCTCAATCGGGACATT 58.205 42.857 0.00 0.00 0.00 2.71
5104 7180 2.159085 GCGTATGCAGAAGTAGAAGGGT 60.159 50.000 0.89 0.00 42.15 4.34
5247 7324 9.268268 TGTAGAGGTATTGTTAACACAGAAAAG 57.732 33.333 8.07 0.00 33.22 2.27
5258 7337 6.599356 TGTTCTGCTGTAGAGGTATTGTTA 57.401 37.500 0.00 0.00 36.61 2.41
5457 7594 8.037758 TCGTTAGTACCCCGTAATAAAAATGAA 58.962 33.333 0.00 0.00 31.93 2.57
5597 7734 7.995463 AGACGAATACTCAATTCTTTAGAGC 57.005 36.000 0.00 0.00 41.68 4.09
5717 7872 3.837146 TGCAATAAAGGCATCCCTGAAAA 59.163 39.130 0.00 0.00 41.90 2.29
5775 7951 1.142465 AGGCTTGGCTCATAGGACATG 59.858 52.381 0.00 0.00 0.00 3.21
5783 7959 1.228644 TGCACAAGGCTTGGCTCAT 60.229 52.632 29.26 6.83 45.15 2.90
5853 8029 1.023513 CAGCCTCCTTCGCTTTCCTG 61.024 60.000 0.00 0.00 33.17 3.86
5856 8032 2.744768 CGCAGCCTCCTTCGCTTTC 61.745 63.158 0.00 0.00 33.17 2.62
6115 8294 2.133742 AACATGAAGCGTGTGCCAGC 62.134 55.000 0.00 0.00 44.31 4.85
6141 8320 4.309950 GGGTGGTTCACGTCCGCT 62.310 66.667 5.43 0.00 34.83 5.52
6401 8580 0.176910 GGACACTAGCTCCTCCTTGC 59.823 60.000 0.00 0.00 0.00 4.01
6405 8584 1.781786 TCATGGACACTAGCTCCTCC 58.218 55.000 8.23 0.00 0.00 4.30
6429 8608 0.107116 AGTCGTCCTCGCAGATACCT 60.107 55.000 0.00 0.00 33.89 3.08
6486 8665 1.881252 GAACAGTCGCGTGTGGTGT 60.881 57.895 5.77 0.67 0.00 4.16
6498 8677 0.841289 TTTCGTCCTTGGGGAACAGT 59.159 50.000 0.00 0.00 44.15 3.55
6519 8698 1.150827 CATTCGTTGTCTGCAGCTCA 58.849 50.000 9.47 8.10 0.00 4.26
6585 8767 2.785357 AGAAATCCTCCTCCTCCGAT 57.215 50.000 0.00 0.00 0.00 4.18
6598 8780 1.742268 GTGGCTGCAGAGGAAGAAATC 59.258 52.381 20.43 0.00 0.00 2.17
6599 8781 1.831580 GTGGCTGCAGAGGAAGAAAT 58.168 50.000 20.43 0.00 0.00 2.17
6600 8782 0.603707 CGTGGCTGCAGAGGAAGAAA 60.604 55.000 20.43 0.00 0.00 2.52
6664 8846 2.194271 CTTGAAGCCGTTATCGTCCTC 58.806 52.381 0.00 0.00 35.01 3.71
6673 8855 4.012895 CACGCGCTTGAAGCCGTT 62.013 61.111 23.93 11.79 42.42 4.44
6955 9173 0.040958 CACACAAGAAGCAGAACGCC 60.041 55.000 0.00 0.00 44.04 5.68
7012 9315 2.226330 ACACAGCAATGCCGTAAGAAA 58.774 42.857 0.00 0.00 43.02 2.52
7023 9326 2.886523 AGCATGTACACAACACAGCAAT 59.113 40.909 0.00 0.00 42.09 3.56
7034 9337 2.518949 CAATTTGGCGAGCATGTACAC 58.481 47.619 0.00 0.00 0.00 2.90
7063 9366 0.941542 TGTACGAACACAGCAAAGCC 59.058 50.000 0.00 0.00 0.00 4.35
7123 9480 2.360483 ACAGTGATCAGCAGTATCTCCG 59.640 50.000 0.00 0.00 0.00 4.63
7251 9609 6.293027 GGAATGCCAAAGAAATGTCAAAACTG 60.293 38.462 0.00 0.00 0.00 3.16
7253 9611 5.333263 CGGAATGCCAAAGAAATGTCAAAAC 60.333 40.000 0.00 0.00 0.00 2.43
7484 9867 6.323225 ACCACTACGGCTATTACTAGTGATTT 59.677 38.462 5.39 0.00 38.86 2.17
7539 9922 3.181473 CGATACCGGTGTGGGATTTTCTA 60.181 47.826 19.93 0.00 43.52 2.10
7780 10163 3.547613 CGAGTATTTTCGGACGTAGGGAG 60.548 52.174 0.00 0.00 36.95 4.30
7781 10164 2.355756 CGAGTATTTTCGGACGTAGGGA 59.644 50.000 0.00 0.00 36.95 4.20
7782 10165 2.098117 ACGAGTATTTTCGGACGTAGGG 59.902 50.000 0.00 0.00 44.57 3.53
7783 10166 3.357897 GACGAGTATTTTCGGACGTAGG 58.642 50.000 0.00 0.00 44.57 3.18
7784 10167 3.024991 CGACGAGTATTTTCGGACGTAG 58.975 50.000 0.00 0.00 44.57 3.51
7785 10168 3.038352 CGACGAGTATTTTCGGACGTA 57.962 47.619 0.00 0.00 44.57 3.57
7786 10169 1.887320 CGACGAGTATTTTCGGACGT 58.113 50.000 0.00 0.00 44.57 4.34
7791 10174 2.838386 TCCTCCGACGAGTATTTTCG 57.162 50.000 0.00 0.00 45.70 3.46
7792 10175 3.802685 CCATTCCTCCGACGAGTATTTTC 59.197 47.826 0.00 0.00 33.93 2.29
7793 10176 3.449737 TCCATTCCTCCGACGAGTATTTT 59.550 43.478 0.00 0.00 33.93 1.82
7794 10177 3.028850 TCCATTCCTCCGACGAGTATTT 58.971 45.455 0.00 0.00 33.93 1.40
7795 10178 2.662866 TCCATTCCTCCGACGAGTATT 58.337 47.619 0.00 0.00 33.93 1.89
7796 10179 2.359981 TCCATTCCTCCGACGAGTAT 57.640 50.000 0.00 0.00 33.93 2.12
7797 10180 1.954382 CATCCATTCCTCCGACGAGTA 59.046 52.381 0.00 0.00 33.93 2.59
7798 10181 0.747255 CATCCATTCCTCCGACGAGT 59.253 55.000 0.00 0.00 33.93 4.18
7799 10182 0.747255 ACATCCATTCCTCCGACGAG 59.253 55.000 0.00 0.00 35.72 4.18
7800 10183 2.061509 TACATCCATTCCTCCGACGA 57.938 50.000 0.00 0.00 0.00 4.20
7801 10184 2.558795 AGATACATCCATTCCTCCGACG 59.441 50.000 0.00 0.00 0.00 5.12
7802 10185 5.010933 TCTAGATACATCCATTCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
7803 10186 5.256806 TCTAGATACATCCATTCCTCCGA 57.743 43.478 0.00 0.00 0.00 4.55
7804 10187 5.420421 ACATCTAGATACATCCATTCCTCCG 59.580 44.000 4.54 0.00 0.00 4.63
7805 10188 6.865834 ACATCTAGATACATCCATTCCTCC 57.134 41.667 4.54 0.00 0.00 4.30
7841 10224 9.679596 CGAAGAAATGCATAAAAATGAATGTTC 57.320 29.630 0.00 0.00 0.00 3.18
7842 10225 9.421806 TCGAAGAAATGCATAAAAATGAATGTT 57.578 25.926 0.00 0.00 0.00 2.71
7843 10226 8.863049 GTCGAAGAAATGCATAAAAATGAATGT 58.137 29.630 0.00 0.00 39.69 2.71
7844 10227 8.862074 TGTCGAAGAAATGCATAAAAATGAATG 58.138 29.630 0.00 0.00 39.69 2.67
7845 10228 8.984891 TGTCGAAGAAATGCATAAAAATGAAT 57.015 26.923 0.00 0.00 39.69 2.57
7846 10229 8.809159 TTGTCGAAGAAATGCATAAAAATGAA 57.191 26.923 0.00 0.00 39.69 2.57
7847 10230 8.081633 ACTTGTCGAAGAAATGCATAAAAATGA 58.918 29.630 0.00 0.00 39.69 2.57
7848 10231 8.231304 ACTTGTCGAAGAAATGCATAAAAATG 57.769 30.769 0.00 0.00 39.69 2.32
7850 10233 9.906660 AATACTTGTCGAAGAAATGCATAAAAA 57.093 25.926 0.00 0.00 39.69 1.94
7851 10234 9.906660 AAATACTTGTCGAAGAAATGCATAAAA 57.093 25.926 0.00 0.00 39.69 1.52
7852 10235 9.554724 GAAATACTTGTCGAAGAAATGCATAAA 57.445 29.630 0.00 0.00 39.69 1.40
7853 10236 8.181573 GGAAATACTTGTCGAAGAAATGCATAA 58.818 33.333 0.00 0.00 39.69 1.90
7854 10237 7.465379 CGGAAATACTTGTCGAAGAAATGCATA 60.465 37.037 0.00 0.00 39.69 3.14
7855 10238 6.555315 GGAAATACTTGTCGAAGAAATGCAT 58.445 36.000 0.00 0.00 39.69 3.96
7856 10239 5.390461 CGGAAATACTTGTCGAAGAAATGCA 60.390 40.000 0.00 0.00 39.69 3.96
7857 10240 5.022021 CGGAAATACTTGTCGAAGAAATGC 58.978 41.667 0.00 0.00 39.69 3.56
7858 10241 5.350365 TCCGGAAATACTTGTCGAAGAAATG 59.650 40.000 0.00 0.00 39.69 2.32
7859 10242 5.350640 GTCCGGAAATACTTGTCGAAGAAAT 59.649 40.000 5.23 0.00 39.69 2.17
7860 10243 4.687483 GTCCGGAAATACTTGTCGAAGAAA 59.313 41.667 5.23 0.00 39.69 2.52
7861 10244 4.240096 GTCCGGAAATACTTGTCGAAGAA 58.760 43.478 5.23 0.00 39.69 2.52
7862 10245 3.671433 CGTCCGGAAATACTTGTCGAAGA 60.671 47.826 5.23 0.00 32.98 2.87
7863 10246 2.597305 CGTCCGGAAATACTTGTCGAAG 59.403 50.000 5.23 0.00 35.07 3.79
7864 10247 2.598589 CGTCCGGAAATACTTGTCGAA 58.401 47.619 5.23 0.00 0.00 3.71
7865 10248 1.135315 CCGTCCGGAAATACTTGTCGA 60.135 52.381 5.23 0.00 37.50 4.20
7866 10249 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
7867 10250 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
7868 10251 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
7869 10252 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
7870 10253 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
7871 10254 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
7872 10255 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
7873 10256 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
7874 10257 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
7875 10258 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
7876 10259 0.466922 GATACTCCCTCCGTCCGGAA 60.467 60.000 5.23 0.00 44.66 4.30
7877 10260 1.150081 GATACTCCCTCCGTCCGGA 59.850 63.158 0.00 0.00 42.90 5.14
7878 10261 0.754217 TTGATACTCCCTCCGTCCGG 60.754 60.000 0.00 0.00 0.00 5.14
7879 10262 1.108776 TTTGATACTCCCTCCGTCCG 58.891 55.000 0.00 0.00 0.00 4.79
7880 10263 1.829222 TGTTTGATACTCCCTCCGTCC 59.171 52.381 0.00 0.00 0.00 4.79
7881 10264 3.821421 ATGTTTGATACTCCCTCCGTC 57.179 47.619 0.00 0.00 0.00 4.79
7882 10265 4.715297 ACTTATGTTTGATACTCCCTCCGT 59.285 41.667 0.00 0.00 0.00 4.69
7883 10266 5.277857 ACTTATGTTTGATACTCCCTCCG 57.722 43.478 0.00 0.00 0.00 4.63
7884 10267 7.339482 AGAAACTTATGTTTGATACTCCCTCC 58.661 38.462 11.15 0.00 45.36 4.30
7885 10268 8.261522 AGAGAAACTTATGTTTGATACTCCCTC 58.738 37.037 11.15 8.65 45.36 4.30
7886 10269 8.152023 AGAGAAACTTATGTTTGATACTCCCT 57.848 34.615 11.15 0.54 45.36 4.20
7887 10270 8.794335 AAGAGAAACTTATGTTTGATACTCCC 57.206 34.615 11.15 0.00 45.36 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.