Multiple sequence alignment - TraesCS2B01G437100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G437100 chr2B 100.000 3737 0 0 1 3737 628917466 628913730 0.000000e+00 6902.0
1 TraesCS2B01G437100 chr2B 93.651 126 7 1 25 150 512346128 512346004 1.770000e-43 187.0
2 TraesCS2B01G437100 chr2A 85.904 1660 116 54 781 2395 674017683 674016097 0.000000e+00 1661.0
3 TraesCS2B01G437100 chr2A 91.614 954 58 9 2662 3601 674015797 674014852 0.000000e+00 1299.0
4 TraesCS2B01G437100 chr2A 88.158 76 7 2 3662 3737 674014860 674014787 5.140000e-14 89.8
5 TraesCS2B01G437100 chr2D 88.267 1304 102 27 2460 3736 529350996 529349717 0.000000e+00 1513.0
6 TraesCS2B01G437100 chr2D 92.099 810 41 8 791 1581 529352588 529351783 0.000000e+00 1120.0
7 TraesCS2B01G437100 chr2D 87.008 839 66 28 1616 2444 529351785 529350980 0.000000e+00 905.0
8 TraesCS2B01G437100 chr1B 93.147 715 47 2 1223 1935 563483115 563482401 0.000000e+00 1048.0
9 TraesCS2B01G437100 chr1B 92.373 708 51 2 1223 1929 35728554 35729259 0.000000e+00 1005.0
10 TraesCS2B01G437100 chr1B 92.157 714 53 2 1223 1935 35808822 35809533 0.000000e+00 1005.0
11 TraesCS2B01G437100 chr1B 94.167 120 7 0 31 150 526343502 526343621 2.290000e-42 183.0
12 TraesCS2B01G437100 chr7B 92.577 714 45 6 1223 1935 594099545 594100251 0.000000e+00 1018.0
13 TraesCS2B01G437100 chr7B 91.877 714 48 7 1223 1935 594077312 594078016 0.000000e+00 989.0
14 TraesCS2B01G437100 chr7B 89.975 399 30 3 3210 3600 9799199 9799595 1.200000e-139 507.0
15 TraesCS2B01G437100 chr7B 92.308 39 3 0 162 200 161632274 161632236 5.210000e-04 56.5
16 TraesCS2B01G437100 chr7B 94.444 36 1 1 235 270 161632265 161632231 2.000000e-03 54.7
17 TraesCS2B01G437100 chr3B 92.168 715 52 3 1223 1935 796766868 796766156 0.000000e+00 1007.0
18 TraesCS2B01G437100 chr3B 88.350 412 35 5 3200 3601 784585001 784585409 2.020000e-132 483.0
19 TraesCS2B01G437100 chr3B 89.130 138 13 2 25 162 188595238 188595103 1.780000e-38 171.0
20 TraesCS2B01G437100 chr3B 88.489 139 10 2 1 133 479986690 479986552 2.990000e-36 163.0
21 TraesCS2B01G437100 chr3B 94.872 39 2 0 409 447 808473099 808473137 1.120000e-05 62.1
22 TraesCS2B01G437100 chr5A 93.968 431 25 1 1506 1935 49651968 49651538 0.000000e+00 651.0
23 TraesCS2B01G437100 chr5A 87.561 410 31 8 3209 3601 400423517 400423111 1.220000e-124 457.0
24 TraesCS2B01G437100 chr5A 87.112 419 34 8 3200 3601 400490088 400490503 1.220000e-124 457.0
25 TraesCS2B01G437100 chr6B 88.750 400 32 6 3210 3600 611900716 611900321 9.390000e-131 477.0
26 TraesCS2B01G437100 chr6B 93.421 152 10 0 1 152 471171651 471171500 3.760000e-55 226.0
27 TraesCS2B01G437100 chr6B 91.339 127 10 1 25 151 504606937 504606812 4.960000e-39 172.0
28 TraesCS2B01G437100 chr6B 84.375 160 15 1 1 150 479784307 479784466 8.360000e-32 148.0
29 TraesCS2B01G437100 chr6B 86.719 128 7 1 1 118 75642208 75642335 2.340000e-27 134.0
30 TraesCS2B01G437100 chr6B 84.615 143 10 3 1 132 570748834 570748693 8.420000e-27 132.0
31 TraesCS2B01G437100 chr1A 87.073 410 31 9 3209 3601 563789917 563789513 9.520000e-121 444.0
32 TraesCS2B01G437100 chr3D 91.518 224 18 1 3379 3601 19019131 19018908 1.300000e-79 307.0
33 TraesCS2B01G437100 chr6A 89.744 156 9 4 1 150 74500993 74501147 3.810000e-45 193.0
34 TraesCS2B01G437100 chr5B 87.898 157 13 2 1 151 492082124 492081968 2.970000e-41 180.0
35 TraesCS2B01G437100 chr5B 77.273 286 48 16 235 515 31438039 31438312 6.460000e-33 152.0
36 TraesCS2B01G437100 chr5B 73.832 214 42 11 238 446 31438126 31438330 5.180000e-09 73.1
37 TraesCS2B01G437100 chr4B 88.125 160 5 5 1 150 358485416 358485571 1.070000e-40 178.0
38 TraesCS2B01G437100 chr4B 89.362 47 5 0 231 277 442962047 442962001 4.030000e-05 60.2
39 TraesCS2B01G437100 chr4B 90.244 41 4 0 173 213 442962041 442962001 2.000000e-03 54.7
40 TraesCS2B01G437100 chr3A 90.625 64 6 0 3674 3737 26500364 26500301 6.650000e-13 86.1
41 TraesCS2B01G437100 chr5D 86.765 68 9 0 2775 2842 251312182 251312115 4.000000e-10 76.8
42 TraesCS2B01G437100 chr5D 86.765 68 9 0 2775 2842 251426939 251426872 4.000000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G437100 chr2B 628913730 628917466 3736 True 6902.000000 6902 100.000000 1 3737 1 chr2B.!!$R2 3736
1 TraesCS2B01G437100 chr2A 674014787 674017683 2896 True 1016.600000 1661 88.558667 781 3737 3 chr2A.!!$R1 2956
2 TraesCS2B01G437100 chr2D 529349717 529352588 2871 True 1179.333333 1513 89.124667 791 3736 3 chr2D.!!$R1 2945
3 TraesCS2B01G437100 chr1B 563482401 563483115 714 True 1048.000000 1048 93.147000 1223 1935 1 chr1B.!!$R1 712
4 TraesCS2B01G437100 chr1B 35728554 35729259 705 False 1005.000000 1005 92.373000 1223 1929 1 chr1B.!!$F1 706
5 TraesCS2B01G437100 chr1B 35808822 35809533 711 False 1005.000000 1005 92.157000 1223 1935 1 chr1B.!!$F2 712
6 TraesCS2B01G437100 chr7B 594099545 594100251 706 False 1018.000000 1018 92.577000 1223 1935 1 chr7B.!!$F3 712
7 TraesCS2B01G437100 chr7B 594077312 594078016 704 False 989.000000 989 91.877000 1223 1935 1 chr7B.!!$F2 712
8 TraesCS2B01G437100 chr3B 796766156 796766868 712 True 1007.000000 1007 92.168000 1223 1935 1 chr3B.!!$R3 712

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
815 816 0.033601 TGGACTTGTGGTTTGGTGCT 60.034 50.0 0.00 0.0 0.0 4.40 F
1265 1314 0.170561 GCACTTGATTCAGGCTGCTG 59.829 55.0 10.34 0.0 0.0 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2682 2829 0.171455 TTGCGTTTTCGGTTTGCTGT 59.829 45.000 0.0 0.0 44.29 4.40 R
2938 3092 1.278985 ACGTGCAAAGGATGGATCAGA 59.721 47.619 0.0 0.0 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.315118 CTTCAGAAAATGGCAAAAACGAC 57.685 39.130 0.00 0.00 0.00 4.34
23 24 3.367607 TCAGAAAATGGCAAAAACGACG 58.632 40.909 0.00 0.00 0.00 5.12
24 25 2.470999 CAGAAAATGGCAAAAACGACGG 59.529 45.455 0.00 0.00 0.00 4.79
25 26 1.790043 GAAAATGGCAAAAACGACGGG 59.210 47.619 0.00 0.00 0.00 5.28
26 27 0.598942 AAATGGCAAAAACGACGGGC 60.599 50.000 0.00 0.00 0.00 6.13
27 28 2.428960 AATGGCAAAAACGACGGGCC 62.429 55.000 0.00 0.00 44.82 5.80
28 29 4.351938 GGCAAAAACGACGGGCCC 62.352 66.667 13.57 13.57 38.70 5.80
29 30 3.292159 GCAAAAACGACGGGCCCT 61.292 61.111 22.43 6.87 0.00 5.19
30 31 2.642700 CAAAAACGACGGGCCCTG 59.357 61.111 22.43 16.23 0.00 4.45
31 32 2.596338 AAAAACGACGGGCCCTGG 60.596 61.111 22.43 11.29 0.00 4.45
57 58 2.084546 CCTTCGGGCTCAAAAACTAGG 58.915 52.381 0.00 0.00 0.00 3.02
58 59 1.468914 CTTCGGGCTCAAAAACTAGGC 59.531 52.381 0.00 0.00 37.55 3.93
61 62 2.180674 GGCTCAAAAACTAGGCCCG 58.819 57.895 0.00 0.00 37.12 6.13
62 63 0.322187 GGCTCAAAAACTAGGCCCGA 60.322 55.000 0.00 0.00 37.12 5.14
63 64 1.087501 GCTCAAAAACTAGGCCCGAG 58.912 55.000 0.00 0.00 0.00 4.63
64 65 1.087501 CTCAAAAACTAGGCCCGAGC 58.912 55.000 0.00 0.00 38.76 5.03
110 111 2.098293 CCAGATCGGGCTTTTTCGG 58.902 57.895 0.00 0.00 0.00 4.30
111 112 1.376609 CCAGATCGGGCTTTTTCGGG 61.377 60.000 0.00 0.00 0.00 5.14
112 113 1.749258 AGATCGGGCTTTTTCGGGC 60.749 57.895 0.00 0.00 0.00 6.13
113 114 2.754254 ATCGGGCTTTTTCGGGCC 60.754 61.111 0.00 0.00 46.89 5.80
143 144 3.727258 CCGGCCTTCCCATGGTCA 61.727 66.667 11.73 0.00 0.00 4.02
144 145 2.124570 CGGCCTTCCCATGGTCAG 60.125 66.667 11.73 5.70 0.00 3.51
145 146 2.276740 GGCCTTCCCATGGTCAGG 59.723 66.667 18.56 18.56 0.00 3.86
146 147 2.308722 GGCCTTCCCATGGTCAGGA 61.309 63.158 24.70 7.41 0.00 3.86
147 148 1.077429 GCCTTCCCATGGTCAGGAC 60.077 63.158 24.70 14.59 0.00 3.85
148 149 1.566298 GCCTTCCCATGGTCAGGACT 61.566 60.000 24.70 0.00 0.00 3.85
149 150 1.879575 CCTTCCCATGGTCAGGACTA 58.120 55.000 18.18 0.00 0.00 2.59
150 151 1.765314 CCTTCCCATGGTCAGGACTAG 59.235 57.143 18.18 1.53 0.00 2.57
151 152 1.765314 CTTCCCATGGTCAGGACTAGG 59.235 57.143 11.73 0.00 0.00 3.02
152 153 0.691078 TCCCATGGTCAGGACTAGGC 60.691 60.000 11.73 0.00 0.00 3.93
153 154 0.982852 CCCATGGTCAGGACTAGGCA 60.983 60.000 11.73 0.00 0.00 4.75
154 155 0.179000 CCATGGTCAGGACTAGGCAC 59.821 60.000 2.57 0.00 0.00 5.01
155 156 0.179100 CATGGTCAGGACTAGGCACG 60.179 60.000 0.00 0.00 0.00 5.34
156 157 0.324368 ATGGTCAGGACTAGGCACGA 60.324 55.000 0.00 0.00 0.00 4.35
157 158 1.248785 TGGTCAGGACTAGGCACGAC 61.249 60.000 7.88 7.88 0.00 4.34
158 159 1.511768 GTCAGGACTAGGCACGACC 59.488 63.158 0.00 0.00 39.61 4.79
159 160 1.076014 TCAGGACTAGGCACGACCA 59.924 57.895 0.00 0.00 43.14 4.02
160 161 0.965866 TCAGGACTAGGCACGACCAG 60.966 60.000 0.00 0.00 43.14 4.00
161 162 2.184579 GGACTAGGCACGACCAGC 59.815 66.667 0.00 0.00 43.14 4.85
162 163 2.646175 GGACTAGGCACGACCAGCA 61.646 63.158 0.00 0.00 43.14 4.41
163 164 1.292223 GACTAGGCACGACCAGCAA 59.708 57.895 0.00 0.00 43.14 3.91
164 165 0.320421 GACTAGGCACGACCAGCAAA 60.320 55.000 0.00 0.00 43.14 3.68
165 166 0.324943 ACTAGGCACGACCAGCAAAT 59.675 50.000 0.00 0.00 43.14 2.32
166 167 1.009829 CTAGGCACGACCAGCAAATC 58.990 55.000 0.00 0.00 43.14 2.17
167 168 0.392461 TAGGCACGACCAGCAAATCC 60.392 55.000 0.00 0.00 43.14 3.01
168 169 2.480555 GCACGACCAGCAAATCCG 59.519 61.111 0.00 0.00 0.00 4.18
169 170 2.480555 CACGACCAGCAAATCCGC 59.519 61.111 0.00 0.00 0.00 5.54
170 171 3.118454 ACGACCAGCAAATCCGCG 61.118 61.111 0.00 0.00 36.85 6.46
171 172 3.118454 CGACCAGCAAATCCGCGT 61.118 61.111 4.92 0.00 36.85 6.01
172 173 2.785258 GACCAGCAAATCCGCGTC 59.215 61.111 4.92 0.00 36.85 5.19
173 174 1.741770 GACCAGCAAATCCGCGTCT 60.742 57.895 4.92 0.00 36.85 4.18
174 175 1.696832 GACCAGCAAATCCGCGTCTC 61.697 60.000 4.92 0.00 36.85 3.36
175 176 1.448540 CCAGCAAATCCGCGTCTCT 60.449 57.895 4.92 0.00 36.85 3.10
176 177 1.424493 CCAGCAAATCCGCGTCTCTC 61.424 60.000 4.92 0.00 36.85 3.20
177 178 0.737367 CAGCAAATCCGCGTCTCTCA 60.737 55.000 4.92 0.00 36.85 3.27
178 179 0.737715 AGCAAATCCGCGTCTCTCAC 60.738 55.000 4.92 0.00 36.85 3.51
191 192 3.604392 GTCTCTCACGAAAACAAAACCG 58.396 45.455 0.00 0.00 0.00 4.44
192 193 3.063045 GTCTCTCACGAAAACAAAACCGT 59.937 43.478 0.00 0.00 35.46 4.83
195 196 0.917939 CACGAAAACAAAACCGTGCC 59.082 50.000 0.00 0.00 44.24 5.01
196 197 0.812549 ACGAAAACAAAACCGTGCCT 59.187 45.000 0.00 0.00 33.69 4.75
197 198 1.202211 ACGAAAACAAAACCGTGCCTC 60.202 47.619 0.00 0.00 33.69 4.70
198 199 1.064952 CGAAAACAAAACCGTGCCTCT 59.935 47.619 0.00 0.00 0.00 3.69
199 200 2.727777 GAAAACAAAACCGTGCCTCTC 58.272 47.619 0.00 0.00 0.00 3.20
200 201 1.757682 AAACAAAACCGTGCCTCTCA 58.242 45.000 0.00 0.00 0.00 3.27
201 202 1.981256 AACAAAACCGTGCCTCTCAT 58.019 45.000 0.00 0.00 0.00 2.90
202 203 2.851263 ACAAAACCGTGCCTCTCATA 57.149 45.000 0.00 0.00 0.00 2.15
203 204 3.134574 ACAAAACCGTGCCTCTCATAA 57.865 42.857 0.00 0.00 0.00 1.90
204 205 3.482436 ACAAAACCGTGCCTCTCATAAA 58.518 40.909 0.00 0.00 0.00 1.40
205 206 3.886505 ACAAAACCGTGCCTCTCATAAAA 59.113 39.130 0.00 0.00 0.00 1.52
206 207 4.023193 ACAAAACCGTGCCTCTCATAAAAG 60.023 41.667 0.00 0.00 0.00 2.27
207 208 3.695830 AACCGTGCCTCTCATAAAAGA 57.304 42.857 0.00 0.00 0.00 2.52
208 209 3.695830 ACCGTGCCTCTCATAAAAGAA 57.304 42.857 0.00 0.00 0.00 2.52
209 210 4.015872 ACCGTGCCTCTCATAAAAGAAA 57.984 40.909 0.00 0.00 0.00 2.52
210 211 4.394729 ACCGTGCCTCTCATAAAAGAAAA 58.605 39.130 0.00 0.00 0.00 2.29
211 212 4.825085 ACCGTGCCTCTCATAAAAGAAAAA 59.175 37.500 0.00 0.00 0.00 1.94
243 244 3.240203 TTTTTCGCGCCTCTCACG 58.760 55.556 0.00 0.00 0.00 4.35
244 245 1.300311 TTTTTCGCGCCTCTCACGA 60.300 52.632 0.00 0.00 0.00 4.35
245 246 0.876777 TTTTTCGCGCCTCTCACGAA 60.877 50.000 0.00 0.00 43.42 3.85
246 247 2.337170 TTCGCGCCTCTCACGAAA 59.663 55.556 0.00 0.00 42.30 3.46
247 248 1.300311 TTCGCGCCTCTCACGAAAA 60.300 52.632 0.00 0.00 42.30 2.29
248 249 1.554042 TTCGCGCCTCTCACGAAAAC 61.554 55.000 0.00 0.00 42.30 2.43
249 250 2.307309 CGCGCCTCTCACGAAAACA 61.307 57.895 0.00 0.00 0.00 2.83
250 251 1.827315 CGCGCCTCTCACGAAAACAA 61.827 55.000 0.00 0.00 0.00 2.83
251 252 0.306533 GCGCCTCTCACGAAAACAAA 59.693 50.000 0.00 0.00 0.00 2.83
252 253 1.268335 GCGCCTCTCACGAAAACAAAA 60.268 47.619 0.00 0.00 0.00 2.44
253 254 2.372350 CGCCTCTCACGAAAACAAAAC 58.628 47.619 0.00 0.00 0.00 2.43
254 255 2.727777 GCCTCTCACGAAAACAAAACC 58.272 47.619 0.00 0.00 0.00 3.27
255 256 2.853281 GCCTCTCACGAAAACAAAACCG 60.853 50.000 0.00 0.00 0.00 4.44
256 257 2.353579 CCTCTCACGAAAACAAAACCGT 59.646 45.455 0.00 0.00 35.46 4.83
259 260 0.917939 CACGAAAACAAAACCGTGCC 59.082 50.000 0.00 0.00 44.24 5.01
260 261 0.812549 ACGAAAACAAAACCGTGCCT 59.187 45.000 0.00 0.00 33.69 4.75
261 262 1.202211 ACGAAAACAAAACCGTGCCTC 60.202 47.619 0.00 0.00 33.69 4.70
262 263 1.064952 CGAAAACAAAACCGTGCCTCT 59.935 47.619 0.00 0.00 0.00 3.69
263 264 2.478879 CGAAAACAAAACCGTGCCTCTT 60.479 45.455 0.00 0.00 0.00 2.85
264 265 2.577449 AAACAAAACCGTGCCTCTTG 57.423 45.000 0.00 0.00 0.00 3.02
265 266 0.102300 AACAAAACCGTGCCTCTTGC 59.898 50.000 0.00 0.00 41.77 4.01
275 276 3.346426 GCCTCTTGCAGAAGGGAAA 57.654 52.632 15.89 0.00 40.77 3.13
276 277 1.620822 GCCTCTTGCAGAAGGGAAAA 58.379 50.000 15.89 0.00 40.77 2.29
277 278 2.174360 GCCTCTTGCAGAAGGGAAAAT 58.826 47.619 15.89 0.00 40.77 1.82
278 279 3.356290 GCCTCTTGCAGAAGGGAAAATA 58.644 45.455 15.89 0.00 40.77 1.40
279 280 3.763897 GCCTCTTGCAGAAGGGAAAATAA 59.236 43.478 15.89 0.00 40.77 1.40
280 281 4.142293 GCCTCTTGCAGAAGGGAAAATAAG 60.142 45.833 15.89 0.00 40.77 1.73
281 282 5.256474 CCTCTTGCAGAAGGGAAAATAAGA 58.744 41.667 8.27 0.00 30.10 2.10
282 283 5.711976 CCTCTTGCAGAAGGGAAAATAAGAA 59.288 40.000 8.27 0.00 30.10 2.52
283 284 6.209391 CCTCTTGCAGAAGGGAAAATAAGAAA 59.791 38.462 8.27 0.00 30.10 2.52
284 285 7.255942 CCTCTTGCAGAAGGGAAAATAAGAAAA 60.256 37.037 8.27 0.00 30.10 2.29
285 286 7.433680 TCTTGCAGAAGGGAAAATAAGAAAAC 58.566 34.615 0.00 0.00 0.00 2.43
286 287 5.768317 TGCAGAAGGGAAAATAAGAAAACG 58.232 37.500 0.00 0.00 0.00 3.60
287 288 5.533154 TGCAGAAGGGAAAATAAGAAAACGA 59.467 36.000 0.00 0.00 0.00 3.85
288 289 5.856986 GCAGAAGGGAAAATAAGAAAACGAC 59.143 40.000 0.00 0.00 0.00 4.34
289 290 6.294010 GCAGAAGGGAAAATAAGAAAACGACT 60.294 38.462 0.00 0.00 0.00 4.18
290 291 7.649057 CAGAAGGGAAAATAAGAAAACGACTT 58.351 34.615 0.00 0.00 0.00 3.01
291 292 7.803659 CAGAAGGGAAAATAAGAAAACGACTTC 59.196 37.037 0.00 0.00 0.00 3.01
292 293 7.720074 AGAAGGGAAAATAAGAAAACGACTTCT 59.280 33.333 0.00 0.00 37.24 2.85
293 294 8.913487 AAGGGAAAATAAGAAAACGACTTCTA 57.087 30.769 0.00 0.00 34.49 2.10
294 295 9.516546 AAGGGAAAATAAGAAAACGACTTCTAT 57.483 29.630 0.00 0.00 34.49 1.98
295 296 9.516546 AGGGAAAATAAGAAAACGACTTCTATT 57.483 29.630 0.00 0.00 34.49 1.73
304 305 9.678941 AAGAAAACGACTTCTATTTTCCATTTC 57.321 29.630 5.33 0.00 41.29 2.17
305 306 8.297426 AGAAAACGACTTCTATTTTCCATTTCC 58.703 33.333 5.33 0.00 41.29 3.13
306 307 5.796350 ACGACTTCTATTTTCCATTTCCG 57.204 39.130 0.00 0.00 0.00 4.30
307 308 5.484715 ACGACTTCTATTTTCCATTTCCGA 58.515 37.500 0.00 0.00 0.00 4.55
308 309 5.581085 ACGACTTCTATTTTCCATTTCCGAG 59.419 40.000 0.00 0.00 0.00 4.63
309 310 5.810587 CGACTTCTATTTTCCATTTCCGAGA 59.189 40.000 0.00 0.00 0.00 4.04
310 311 6.312918 CGACTTCTATTTTCCATTTCCGAGAA 59.687 38.462 0.00 0.00 0.00 2.87
311 312 7.148474 CGACTTCTATTTTCCATTTCCGAGAAA 60.148 37.037 2.25 2.25 0.00 2.52
312 313 7.817641 ACTTCTATTTTCCATTTCCGAGAAAC 58.182 34.615 1.85 0.00 0.00 2.78
313 314 7.447238 ACTTCTATTTTCCATTTCCGAGAAACA 59.553 33.333 1.85 0.00 0.00 2.83
314 315 7.141100 TCTATTTTCCATTTCCGAGAAACAC 57.859 36.000 1.85 0.00 0.00 3.32
315 316 3.889196 TTTCCATTTCCGAGAAACACG 57.111 42.857 1.85 0.00 0.00 4.49
333 334 4.373116 GCCGTGCCTCTCGTGGAA 62.373 66.667 0.00 0.00 0.00 3.53
334 335 2.125912 CCGTGCCTCTCGTGGAAG 60.126 66.667 0.00 0.00 0.00 3.46
335 336 2.125912 CGTGCCTCTCGTGGAAGG 60.126 66.667 0.00 0.00 0.00 3.46
336 337 2.636412 CGTGCCTCTCGTGGAAGGA 61.636 63.158 0.00 0.00 0.00 3.36
337 338 1.671742 GTGCCTCTCGTGGAAGGAA 59.328 57.895 0.00 0.00 0.00 3.36
338 339 0.250513 GTGCCTCTCGTGGAAGGAAT 59.749 55.000 0.00 0.00 0.00 3.01
339 340 0.984230 TGCCTCTCGTGGAAGGAATT 59.016 50.000 0.00 0.00 0.00 2.17
340 341 1.066143 TGCCTCTCGTGGAAGGAATTC 60.066 52.381 0.00 0.00 0.00 2.17
341 342 1.927895 CCTCTCGTGGAAGGAATTCG 58.072 55.000 0.00 0.00 0.00 3.34
342 343 1.204941 CCTCTCGTGGAAGGAATTCGT 59.795 52.381 0.00 0.00 0.00 3.85
343 344 2.263077 CTCTCGTGGAAGGAATTCGTG 58.737 52.381 0.58 0.00 0.00 4.35
344 345 0.721718 CTCGTGGAAGGAATTCGTGC 59.278 55.000 0.58 0.00 0.00 5.34
345 346 0.672401 TCGTGGAAGGAATTCGTGCC 60.672 55.000 17.04 17.04 0.00 5.01
346 347 0.673644 CGTGGAAGGAATTCGTGCCT 60.674 55.000 22.83 2.23 35.61 4.75
347 348 1.087501 GTGGAAGGAATTCGTGCCTC 58.912 55.000 22.83 16.82 32.07 4.70
348 349 0.035439 TGGAAGGAATTCGTGCCTCC 60.035 55.000 22.83 15.92 32.07 4.30
349 350 0.748367 GGAAGGAATTCGTGCCTCCC 60.748 60.000 16.68 0.00 32.07 4.30
350 351 0.035439 GAAGGAATTCGTGCCTCCCA 60.035 55.000 0.58 0.00 32.07 4.37
351 352 0.322546 AAGGAATTCGTGCCTCCCAC 60.323 55.000 0.58 0.00 41.15 4.61
352 353 1.002624 GGAATTCGTGCCTCCCACA 60.003 57.895 0.00 0.00 44.91 4.17
353 354 1.026718 GGAATTCGTGCCTCCCACAG 61.027 60.000 0.00 0.00 44.91 3.66
354 355 0.036388 GAATTCGTGCCTCCCACAGA 60.036 55.000 0.00 0.00 44.91 3.41
355 356 0.400213 AATTCGTGCCTCCCACAGAA 59.600 50.000 0.00 0.00 44.91 3.02
356 357 0.036010 ATTCGTGCCTCCCACAGAAG 60.036 55.000 0.00 0.00 44.91 2.85
357 358 1.118965 TTCGTGCCTCCCACAGAAGA 61.119 55.000 0.00 0.00 44.91 2.87
358 359 1.118965 TCGTGCCTCCCACAGAAGAA 61.119 55.000 0.00 0.00 44.91 2.52
359 360 0.250295 CGTGCCTCCCACAGAAGAAA 60.250 55.000 0.00 0.00 44.91 2.52
360 361 1.813862 CGTGCCTCCCACAGAAGAAAA 60.814 52.381 0.00 0.00 44.91 2.29
361 362 1.882623 GTGCCTCCCACAGAAGAAAAG 59.117 52.381 0.00 0.00 44.06 2.27
362 363 1.774254 TGCCTCCCACAGAAGAAAAGA 59.226 47.619 0.00 0.00 0.00 2.52
363 364 2.174639 TGCCTCCCACAGAAGAAAAGAA 59.825 45.455 0.00 0.00 0.00 2.52
364 365 2.816672 GCCTCCCACAGAAGAAAAGAAG 59.183 50.000 0.00 0.00 0.00 2.85
365 366 3.496870 GCCTCCCACAGAAGAAAAGAAGA 60.497 47.826 0.00 0.00 0.00 2.87
366 367 4.718961 CCTCCCACAGAAGAAAAGAAGAA 58.281 43.478 0.00 0.00 0.00 2.52
367 368 4.759183 CCTCCCACAGAAGAAAAGAAGAAG 59.241 45.833 0.00 0.00 0.00 2.85
368 369 5.372373 CTCCCACAGAAGAAAAGAAGAAGT 58.628 41.667 0.00 0.00 0.00 3.01
369 370 6.464465 CCTCCCACAGAAGAAAAGAAGAAGTA 60.464 42.308 0.00 0.00 0.00 2.24
370 371 6.525629 TCCCACAGAAGAAAAGAAGAAGTAG 58.474 40.000 0.00 0.00 0.00 2.57
371 372 6.326583 TCCCACAGAAGAAAAGAAGAAGTAGA 59.673 38.462 0.00 0.00 0.00 2.59
372 373 6.648725 CCCACAGAAGAAAAGAAGAAGTAGAG 59.351 42.308 0.00 0.00 0.00 2.43
373 374 7.437748 CCACAGAAGAAAAGAAGAAGTAGAGA 58.562 38.462 0.00 0.00 0.00 3.10
374 375 7.928706 CCACAGAAGAAAAGAAGAAGTAGAGAA 59.071 37.037 0.00 0.00 0.00 2.87
375 376 9.319143 CACAGAAGAAAAGAAGAAGTAGAGAAA 57.681 33.333 0.00 0.00 0.00 2.52
376 377 9.892130 ACAGAAGAAAAGAAGAAGTAGAGAAAA 57.108 29.630 0.00 0.00 0.00 2.29
379 380 9.605955 GAAGAAAAGAAGAAGTAGAGAAAATGC 57.394 33.333 0.00 0.00 0.00 3.56
380 381 7.801752 AGAAAAGAAGAAGTAGAGAAAATGCG 58.198 34.615 0.00 0.00 0.00 4.73
381 382 7.442666 AGAAAAGAAGAAGTAGAGAAAATGCGT 59.557 33.333 0.00 0.00 0.00 5.24
382 383 7.497925 AAAGAAGAAGTAGAGAAAATGCGTT 57.502 32.000 0.00 0.00 0.00 4.84
383 384 7.497925 AAGAAGAAGTAGAGAAAATGCGTTT 57.502 32.000 0.00 0.00 0.00 3.60
384 385 7.497925 AGAAGAAGTAGAGAAAATGCGTTTT 57.502 32.000 16.39 16.39 40.13 2.43
385 386 7.931275 AGAAGAAGTAGAGAAAATGCGTTTTT 58.069 30.769 17.39 7.44 40.25 1.94
403 404 2.031465 TCGGTTTTCGAGGGGCAC 59.969 61.111 0.00 0.00 43.74 5.01
404 405 3.053896 CGGTTTTCGAGGGGCACC 61.054 66.667 0.00 0.00 46.49 5.01
418 419 4.027755 CACCGTTGTGCTTCTCGT 57.972 55.556 0.00 0.00 35.31 4.18
419 420 1.564622 CACCGTTGTGCTTCTCGTG 59.435 57.895 0.00 0.00 35.31 4.35
420 421 1.594293 ACCGTTGTGCTTCTCGTGG 60.594 57.895 0.00 0.00 0.00 4.94
421 422 1.300620 CCGTTGTGCTTCTCGTGGA 60.301 57.895 0.00 0.00 0.00 4.02
422 423 0.878523 CCGTTGTGCTTCTCGTGGAA 60.879 55.000 0.00 0.00 0.00 3.53
431 432 1.394917 CTTCTCGTGGAAGCAAATCCG 59.605 52.381 7.65 0.00 43.88 4.18
432 433 0.320374 TCTCGTGGAAGCAAATCCGT 59.680 50.000 0.00 0.00 42.76 4.69
433 434 1.546923 TCTCGTGGAAGCAAATCCGTA 59.453 47.619 0.00 0.00 42.76 4.02
434 435 1.659098 CTCGTGGAAGCAAATCCGTAC 59.341 52.381 0.00 0.00 42.76 3.67
435 436 0.725117 CGTGGAAGCAAATCCGTACC 59.275 55.000 0.00 0.00 42.76 3.34
436 437 1.674817 CGTGGAAGCAAATCCGTACCT 60.675 52.381 0.00 0.00 42.76 3.08
437 438 2.007608 GTGGAAGCAAATCCGTACCTC 58.992 52.381 0.00 0.00 42.76 3.85
438 439 1.906574 TGGAAGCAAATCCGTACCTCT 59.093 47.619 0.00 0.00 42.76 3.69
439 440 2.093658 TGGAAGCAAATCCGTACCTCTC 60.094 50.000 0.00 0.00 42.76 3.20
440 441 2.168728 GGAAGCAAATCCGTACCTCTCT 59.831 50.000 0.00 0.00 0.00 3.10
441 442 3.449632 GAAGCAAATCCGTACCTCTCTC 58.550 50.000 0.00 0.00 0.00 3.20
442 443 1.405821 AGCAAATCCGTACCTCTCTCG 59.594 52.381 0.00 0.00 0.00 4.04
443 444 1.404391 GCAAATCCGTACCTCTCTCGA 59.596 52.381 0.00 0.00 0.00 4.04
444 445 2.159282 GCAAATCCGTACCTCTCTCGAA 60.159 50.000 0.00 0.00 0.00 3.71
445 446 3.675228 GCAAATCCGTACCTCTCTCGAAA 60.675 47.826 0.00 0.00 0.00 3.46
446 447 4.106197 CAAATCCGTACCTCTCTCGAAAG 58.894 47.826 0.00 0.00 0.00 2.62
447 448 1.093159 TCCGTACCTCTCTCGAAAGC 58.907 55.000 0.00 0.00 0.00 3.51
448 449 0.809385 CCGTACCTCTCTCGAAAGCA 59.191 55.000 0.00 0.00 0.00 3.91
449 450 1.201647 CCGTACCTCTCTCGAAAGCAA 59.798 52.381 0.00 0.00 0.00 3.91
450 451 2.352421 CCGTACCTCTCTCGAAAGCAAA 60.352 50.000 0.00 0.00 0.00 3.68
451 452 3.314553 CGTACCTCTCTCGAAAGCAAAA 58.685 45.455 0.00 0.00 0.00 2.44
452 453 3.365220 CGTACCTCTCTCGAAAGCAAAAG 59.635 47.826 0.00 0.00 0.00 2.27
453 454 3.753294 ACCTCTCTCGAAAGCAAAAGA 57.247 42.857 0.00 0.00 0.00 2.52
454 455 4.073293 ACCTCTCTCGAAAGCAAAAGAA 57.927 40.909 0.00 0.00 0.00 2.52
455 456 4.451900 ACCTCTCTCGAAAGCAAAAGAAA 58.548 39.130 0.00 0.00 0.00 2.52
456 457 4.881850 ACCTCTCTCGAAAGCAAAAGAAAA 59.118 37.500 0.00 0.00 0.00 2.29
457 458 5.357032 ACCTCTCTCGAAAGCAAAAGAAAAA 59.643 36.000 0.00 0.00 0.00 1.94
458 459 5.911838 CCTCTCTCGAAAGCAAAAGAAAAAG 59.088 40.000 0.00 0.00 0.00 2.27
459 460 6.238484 CCTCTCTCGAAAGCAAAAGAAAAAGA 60.238 38.462 0.00 0.00 0.00 2.52
460 461 7.083875 TCTCTCGAAAGCAAAAGAAAAAGAA 57.916 32.000 0.00 0.00 0.00 2.52
461 462 7.535139 TCTCTCGAAAGCAAAAGAAAAAGAAA 58.465 30.769 0.00 0.00 0.00 2.52
462 463 8.026607 TCTCTCGAAAGCAAAAGAAAAAGAAAA 58.973 29.630 0.00 0.00 0.00 2.29
463 464 8.527567 TCTCGAAAGCAAAAGAAAAAGAAAAA 57.472 26.923 0.00 0.00 0.00 1.94
464 465 8.432359 TCTCGAAAGCAAAAGAAAAAGAAAAAC 58.568 29.630 0.00 0.00 0.00 2.43
465 466 8.077836 TCGAAAGCAAAAGAAAAAGAAAAACA 57.922 26.923 0.00 0.00 0.00 2.83
466 467 8.007152 TCGAAAGCAAAAGAAAAAGAAAAACAC 58.993 29.630 0.00 0.00 0.00 3.32
467 468 8.009409 CGAAAGCAAAAGAAAAAGAAAAACACT 58.991 29.630 0.00 0.00 0.00 3.55
468 469 9.663904 GAAAGCAAAAGAAAAAGAAAAACACTT 57.336 25.926 0.00 0.00 0.00 3.16
500 501 3.305398 CGAGAGGCATGGTTATACCTC 57.695 52.381 6.68 6.68 44.23 3.85
504 505 3.142174 GAGGCATGGTTATACCTCTTGC 58.858 50.000 7.37 9.16 41.74 4.01
505 506 1.873591 GGCATGGTTATACCTCTTGCG 59.126 52.381 0.00 0.00 38.95 4.85
506 507 1.873591 GCATGGTTATACCTCTTGCGG 59.126 52.381 0.00 0.00 39.58 5.69
507 508 2.484770 GCATGGTTATACCTCTTGCGGA 60.485 50.000 0.00 0.00 39.58 5.54
508 509 3.804036 CATGGTTATACCTCTTGCGGAA 58.196 45.455 0.00 0.00 39.58 4.30
509 510 3.536956 TGGTTATACCTCTTGCGGAAG 57.463 47.619 10.87 10.87 39.58 3.46
555 556 3.626028 TTTCTTTTCCGAGAGCAAAGC 57.374 42.857 0.00 0.00 32.74 3.51
556 557 2.254546 TCTTTTCCGAGAGCAAAGCA 57.745 45.000 0.00 0.00 32.74 3.91
557 558 2.571212 TCTTTTCCGAGAGCAAAGCAA 58.429 42.857 0.00 0.00 32.74 3.91
558 559 2.948979 TCTTTTCCGAGAGCAAAGCAAA 59.051 40.909 0.00 0.00 32.74 3.68
559 560 3.569701 TCTTTTCCGAGAGCAAAGCAAAT 59.430 39.130 0.00 0.00 32.74 2.32
560 561 3.559238 TTTCCGAGAGCAAAGCAAATC 57.441 42.857 0.00 0.00 0.00 2.17
561 562 1.453155 TCCGAGAGCAAAGCAAATCC 58.547 50.000 0.00 0.00 0.00 3.01
562 563 1.003580 TCCGAGAGCAAAGCAAATCCT 59.996 47.619 0.00 0.00 0.00 3.24
563 564 1.815003 CCGAGAGCAAAGCAAATCCTT 59.185 47.619 0.00 0.00 0.00 3.36
564 565 3.009723 CCGAGAGCAAAGCAAATCCTTA 58.990 45.455 0.00 0.00 0.00 2.69
565 566 3.181506 CCGAGAGCAAAGCAAATCCTTAC 60.182 47.826 0.00 0.00 0.00 2.34
566 567 3.181506 CGAGAGCAAAGCAAATCCTTACC 60.182 47.826 0.00 0.00 0.00 2.85
567 568 4.013050 GAGAGCAAAGCAAATCCTTACCT 58.987 43.478 0.00 0.00 0.00 3.08
568 569 4.013050 AGAGCAAAGCAAATCCTTACCTC 58.987 43.478 0.00 0.00 0.00 3.85
569 570 4.013050 GAGCAAAGCAAATCCTTACCTCT 58.987 43.478 0.00 0.00 0.00 3.69
570 571 4.013050 AGCAAAGCAAATCCTTACCTCTC 58.987 43.478 0.00 0.00 0.00 3.20
571 572 3.181506 GCAAAGCAAATCCTTACCTCTCG 60.182 47.826 0.00 0.00 0.00 4.04
572 573 2.317530 AGCAAATCCTTACCTCTCGC 57.682 50.000 0.00 0.00 0.00 5.03
573 574 0.931005 GCAAATCCTTACCTCTCGCG 59.069 55.000 0.00 0.00 0.00 5.87
574 575 1.571919 CAAATCCTTACCTCTCGCGG 58.428 55.000 6.13 0.00 0.00 6.46
575 576 1.136305 CAAATCCTTACCTCTCGCGGA 59.864 52.381 6.13 1.01 0.00 5.54
576 577 1.481871 AATCCTTACCTCTCGCGGAA 58.518 50.000 6.13 0.00 0.00 4.30
577 578 1.033574 ATCCTTACCTCTCGCGGAAG 58.966 55.000 6.13 3.71 0.00 3.46
622 623 2.478547 TTTTCTTTTCCGAACGGCAC 57.521 45.000 8.48 0.00 34.68 5.01
640 641 2.345991 GGCCGTGCCTACTGTGAA 59.654 61.111 7.58 0.00 46.69 3.18
641 642 1.302192 GGCCGTGCCTACTGTGAAA 60.302 57.895 7.58 0.00 46.69 2.69
642 643 1.298859 GGCCGTGCCTACTGTGAAAG 61.299 60.000 7.58 0.00 46.69 2.62
643 644 1.912371 GCCGTGCCTACTGTGAAAGC 61.912 60.000 0.00 0.00 0.00 3.51
644 645 0.602638 CCGTGCCTACTGTGAAAGCA 60.603 55.000 0.00 0.00 0.00 3.91
645 646 1.225855 CGTGCCTACTGTGAAAGCAA 58.774 50.000 0.00 0.00 34.79 3.91
646 647 1.601903 CGTGCCTACTGTGAAAGCAAA 59.398 47.619 0.00 0.00 34.79 3.68
647 648 2.032799 CGTGCCTACTGTGAAAGCAAAA 59.967 45.455 0.00 0.00 34.79 2.44
648 649 3.488384 CGTGCCTACTGTGAAAGCAAAAA 60.488 43.478 0.00 0.00 34.79 1.94
671 672 8.882278 AAAAACACATTTTTCGCGTAATTTTT 57.118 23.077 5.77 8.81 43.10 1.94
691 692 6.561945 TTTTTCCTCGATTTTGTTTTGTCG 57.438 33.333 0.00 0.00 35.55 4.35
692 693 5.487153 TTTCCTCGATTTTGTTTTGTCGA 57.513 34.783 0.00 0.00 40.38 4.20
693 694 5.487153 TTCCTCGATTTTGTTTTGTCGAA 57.513 34.783 0.00 0.00 41.83 3.71
694 695 5.487153 TCCTCGATTTTGTTTTGTCGAAA 57.513 34.783 0.00 0.00 41.83 3.46
695 696 5.881447 TCCTCGATTTTGTTTTGTCGAAAA 58.119 33.333 0.00 0.00 41.83 2.29
696 697 5.968848 TCCTCGATTTTGTTTTGTCGAAAAG 59.031 36.000 0.00 0.00 41.83 2.27
697 698 5.741982 CCTCGATTTTGTTTTGTCGAAAAGT 59.258 36.000 0.00 0.00 41.83 2.66
698 699 6.075572 CCTCGATTTTGTTTTGTCGAAAAGTC 60.076 38.462 0.00 0.00 41.83 3.01
699 700 6.315551 TCGATTTTGTTTTGTCGAAAAGTCA 58.684 32.000 0.00 0.00 39.80 3.41
700 701 6.802348 TCGATTTTGTTTTGTCGAAAAGTCAA 59.198 30.769 0.00 0.00 39.80 3.18
701 702 7.007905 TCGATTTTGTTTTGTCGAAAAGTCAAG 59.992 33.333 0.00 0.00 39.80 3.02
702 703 7.007905 CGATTTTGTTTTGTCGAAAAGTCAAGA 59.992 33.333 0.00 0.00 36.25 3.02
703 704 7.932120 TTTTGTTTTGTCGAAAAGTCAAGAA 57.068 28.000 0.00 0.00 31.57 2.52
704 705 7.932120 TTTGTTTTGTCGAAAAGTCAAGAAA 57.068 28.000 0.00 0.00 31.57 2.52
705 706 7.561237 TTGTTTTGTCGAAAAGTCAAGAAAG 57.439 32.000 0.00 0.00 31.57 2.62
706 707 6.904498 TGTTTTGTCGAAAAGTCAAGAAAGA 58.096 32.000 0.00 0.00 31.57 2.52
707 708 6.799925 TGTTTTGTCGAAAAGTCAAGAAAGAC 59.200 34.615 0.00 0.00 38.81 3.01
708 709 5.479716 TTGTCGAAAAGTCAAGAAAGACC 57.520 39.130 0.00 0.00 39.34 3.85
709 710 3.554324 TGTCGAAAAGTCAAGAAAGACCG 59.446 43.478 0.00 0.00 39.34 4.79
710 711 3.800506 GTCGAAAAGTCAAGAAAGACCGA 59.199 43.478 0.00 0.00 39.34 4.69
711 712 4.269363 GTCGAAAAGTCAAGAAAGACCGAA 59.731 41.667 0.00 0.00 39.34 4.30
712 713 4.871557 TCGAAAAGTCAAGAAAGACCGAAA 59.128 37.500 0.00 0.00 39.34 3.46
713 714 5.352016 TCGAAAAGTCAAGAAAGACCGAAAA 59.648 36.000 0.00 0.00 39.34 2.29
714 715 5.677178 CGAAAAGTCAAGAAAGACCGAAAAG 59.323 40.000 0.00 0.00 39.34 2.27
715 716 4.553756 AAGTCAAGAAAGACCGAAAAGC 57.446 40.909 0.00 0.00 39.34 3.51
716 717 2.879026 AGTCAAGAAAGACCGAAAAGCC 59.121 45.455 0.00 0.00 39.34 4.35
717 718 2.616842 GTCAAGAAAGACCGAAAAGCCA 59.383 45.455 0.00 0.00 32.36 4.75
718 719 3.066203 GTCAAGAAAGACCGAAAAGCCAA 59.934 43.478 0.00 0.00 32.36 4.52
719 720 3.697045 TCAAGAAAGACCGAAAAGCCAAA 59.303 39.130 0.00 0.00 0.00 3.28
720 721 4.158764 TCAAGAAAGACCGAAAAGCCAAAA 59.841 37.500 0.00 0.00 0.00 2.44
721 722 4.729227 AGAAAGACCGAAAAGCCAAAAA 57.271 36.364 0.00 0.00 0.00 1.94
722 723 4.430007 AGAAAGACCGAAAAGCCAAAAAC 58.570 39.130 0.00 0.00 0.00 2.43
723 724 3.878160 AAGACCGAAAAGCCAAAAACA 57.122 38.095 0.00 0.00 0.00 2.83
724 725 3.878160 AGACCGAAAAGCCAAAAACAA 57.122 38.095 0.00 0.00 0.00 2.83
725 726 3.517602 AGACCGAAAAGCCAAAAACAAC 58.482 40.909 0.00 0.00 0.00 3.32
726 727 3.056465 AGACCGAAAAGCCAAAAACAACA 60.056 39.130 0.00 0.00 0.00 3.33
727 728 3.665190 ACCGAAAAGCCAAAAACAACAA 58.335 36.364 0.00 0.00 0.00 2.83
728 729 4.065789 ACCGAAAAGCCAAAAACAACAAA 58.934 34.783 0.00 0.00 0.00 2.83
729 730 4.515567 ACCGAAAAGCCAAAAACAACAAAA 59.484 33.333 0.00 0.00 0.00 2.44
730 731 5.008712 ACCGAAAAGCCAAAAACAACAAAAA 59.991 32.000 0.00 0.00 0.00 1.94
759 760 9.590451 AATCATCTAAAAAGCCATAAACATGTG 57.410 29.630 0.00 0.00 0.00 3.21
760 761 7.035004 TCATCTAAAAAGCCATAAACATGTGC 58.965 34.615 0.00 0.00 0.00 4.57
761 762 5.398169 TCTAAAAAGCCATAAACATGTGCG 58.602 37.500 0.00 0.00 0.00 5.34
762 763 2.652941 AAAGCCATAAACATGTGCGG 57.347 45.000 0.00 0.00 0.00 5.69
763 764 1.832883 AAGCCATAAACATGTGCGGA 58.167 45.000 0.00 0.00 0.00 5.54
764 765 1.832883 AGCCATAAACATGTGCGGAA 58.167 45.000 0.00 0.00 0.00 4.30
765 766 2.166829 AGCCATAAACATGTGCGGAAA 58.833 42.857 0.00 0.00 0.00 3.13
766 767 2.560542 AGCCATAAACATGTGCGGAAAA 59.439 40.909 0.00 0.00 0.00 2.29
767 768 3.006323 AGCCATAAACATGTGCGGAAAAA 59.994 39.130 0.00 0.00 0.00 1.94
768 769 3.932089 GCCATAAACATGTGCGGAAAAAT 59.068 39.130 0.00 0.00 0.00 1.82
769 770 5.105554 AGCCATAAACATGTGCGGAAAAATA 60.106 36.000 0.00 0.00 0.00 1.40
770 771 5.231991 GCCATAAACATGTGCGGAAAAATAG 59.768 40.000 0.00 0.00 0.00 1.73
771 772 6.559810 CCATAAACATGTGCGGAAAAATAGA 58.440 36.000 0.00 0.00 0.00 1.98
772 773 7.032580 CCATAAACATGTGCGGAAAAATAGAA 58.967 34.615 0.00 0.00 0.00 2.10
773 774 7.543868 CCATAAACATGTGCGGAAAAATAGAAA 59.456 33.333 0.00 0.00 0.00 2.52
774 775 8.920665 CATAAACATGTGCGGAAAAATAGAAAA 58.079 29.630 0.00 0.00 0.00 2.29
775 776 7.778470 AAACATGTGCGGAAAAATAGAAAAA 57.222 28.000 0.00 0.00 0.00 1.94
815 816 0.033601 TGGACTTGTGGTTTGGTGCT 60.034 50.000 0.00 0.00 0.00 4.40
835 844 4.373771 GAGCCGTCGAACCCTTTT 57.626 55.556 0.00 0.00 0.00 2.27
944 987 2.561478 CCAGGATTTATACCGGGGTG 57.439 55.000 6.32 0.00 38.70 4.61
974 1017 3.426309 ATCAGCCCCAGCAATCCCG 62.426 63.158 0.00 0.00 43.56 5.14
1092 1136 1.602237 CCTGGAGTACCCATGCGTT 59.398 57.895 3.86 0.00 45.57 4.84
1175 1219 3.273434 TCCAAGCGTACGTATCAGTACT 58.727 45.455 17.90 0.00 43.42 2.73
1195 1239 0.179056 ATCACCACGCCTAAATCCCG 60.179 55.000 0.00 0.00 0.00 5.14
1200 1244 2.353610 ACGCCTAAATCCCGTCGGT 61.354 57.895 11.06 0.00 0.00 4.69
1201 1245 1.153509 CGCCTAAATCCCGTCGGTT 60.154 57.895 11.06 0.30 0.00 4.44
1202 1246 0.741927 CGCCTAAATCCCGTCGGTTT 60.742 55.000 11.06 7.77 0.00 3.27
1203 1247 1.012086 GCCTAAATCCCGTCGGTTTC 58.988 55.000 11.06 0.00 0.00 2.78
1204 1248 1.406477 GCCTAAATCCCGTCGGTTTCT 60.406 52.381 11.06 0.00 0.00 2.52
1220 1264 1.334992 TTCTTTCTTCGCGTCGCTCG 61.335 55.000 16.36 0.08 43.12 5.03
1248 1297 0.515127 CAATCCTTTGCACGTACGCA 59.485 50.000 16.72 2.78 41.03 5.24
1265 1314 0.170561 GCACTTGATTCAGGCTGCTG 59.829 55.000 10.34 0.00 0.00 4.41
1394 1443 4.841617 ATGCTCGGCGAGGAGGGA 62.842 66.667 35.03 14.65 32.71 4.20
1700 1753 5.411053 GGTTTTGAACATCTCTTCCTCTGAG 59.589 44.000 0.00 0.00 0.00 3.35
1843 1897 1.103398 CAACATTCTCCCCATCCGGC 61.103 60.000 0.00 0.00 0.00 6.13
1873 1927 6.155475 GCAGGTATATATGCTCCTTCCTAG 57.845 45.833 0.62 0.00 39.38 3.02
1931 1986 2.977772 TGGTTTTCAGTTTTGCTGGG 57.022 45.000 0.00 0.00 45.08 4.45
1947 2002 2.417719 CTGGGCACTGTTCTGACTTAC 58.582 52.381 0.00 0.00 0.00 2.34
1960 2015 5.864418 TCTGACTTACTGTACCTTGTGTT 57.136 39.130 0.00 0.00 0.00 3.32
1961 2016 5.597806 TCTGACTTACTGTACCTTGTGTTG 58.402 41.667 0.00 0.00 0.00 3.33
1965 2021 6.757947 TGACTTACTGTACCTTGTGTTGTAAC 59.242 38.462 0.00 0.00 0.00 2.50
1992 2048 1.215382 CTCATCGGAGGCGTCACAA 59.785 57.895 8.91 0.00 37.51 3.33
2034 2090 3.378427 GCAGCTTCCGATCTTACCAAATT 59.622 43.478 0.00 0.00 0.00 1.82
2038 2094 6.018669 CAGCTTCCGATCTTACCAAATTCTAC 60.019 42.308 0.00 0.00 0.00 2.59
2057 2113 0.324830 CCTCCGGAAGAAGAGGAGGT 60.325 60.000 18.82 0.00 41.50 3.85
2058 2114 1.063867 CCTCCGGAAGAAGAGGAGGTA 60.064 57.143 18.82 0.00 41.50 3.08
2059 2115 2.025898 CTCCGGAAGAAGAGGAGGTAC 58.974 57.143 5.23 0.00 41.50 3.34
2093 2149 6.147985 GGTTCTCATGTCTCTGGTTTCTAAAC 59.852 42.308 0.00 0.00 38.17 2.01
2094 2150 6.419484 TCTCATGTCTCTGGTTTCTAAACA 57.581 37.500 7.80 0.00 40.63 2.83
2095 2151 7.009179 TCTCATGTCTCTGGTTTCTAAACAT 57.991 36.000 7.80 0.00 40.63 2.71
2096 2152 7.099764 TCTCATGTCTCTGGTTTCTAAACATC 58.900 38.462 7.80 0.00 40.63 3.06
2101 2157 5.639931 GTCTCTGGTTTCTAAACATCCAGAC 59.360 44.000 7.94 8.47 46.20 3.51
2102 2158 5.306937 TCTCTGGTTTCTAAACATCCAGACA 59.693 40.000 7.94 0.00 46.20 3.41
2104 2160 5.071788 TCTGGTTTCTAAACATCCAGACACT 59.928 40.000 7.94 0.00 46.20 3.55
2105 2161 5.305585 TGGTTTCTAAACATCCAGACACTC 58.694 41.667 7.80 0.00 40.63 3.51
2107 2163 5.940470 GGTTTCTAAACATCCAGACACTCAT 59.060 40.000 7.80 0.00 40.63 2.90
2108 2164 6.128172 GGTTTCTAAACATCCAGACACTCATG 60.128 42.308 7.80 0.00 40.63 3.07
2134 2190 2.936050 GCAATGTGCTTTGCTTTGTC 57.064 45.000 13.34 0.00 46.66 3.18
2135 2191 1.528161 GCAATGTGCTTTGCTTTGTCC 59.472 47.619 13.34 0.00 46.66 4.02
2136 2192 2.823984 CAATGTGCTTTGCTTTGTCCA 58.176 42.857 0.00 0.00 0.00 4.02
2137 2193 2.798283 CAATGTGCTTTGCTTTGTCCAG 59.202 45.455 0.00 0.00 0.00 3.86
2138 2194 1.473258 TGTGCTTTGCTTTGTCCAGT 58.527 45.000 0.00 0.00 0.00 4.00
2172 2228 4.692625 TGCTATCTTCAAGTCACTTTGAGC 59.307 41.667 0.00 0.00 38.25 4.26
2173 2229 4.934602 GCTATCTTCAAGTCACTTTGAGCT 59.065 41.667 0.00 0.00 38.25 4.09
2174 2230 5.163874 GCTATCTTCAAGTCACTTTGAGCTG 60.164 44.000 0.00 0.00 38.25 4.24
2175 2231 3.470709 TCTTCAAGTCACTTTGAGCTGG 58.529 45.455 0.00 0.00 38.25 4.85
2176 2232 2.260844 TCAAGTCACTTTGAGCTGGG 57.739 50.000 0.00 0.00 32.39 4.45
2179 2235 0.398318 AGTCACTTTGAGCTGGGGAC 59.602 55.000 0.00 0.00 0.00 4.46
2185 2241 2.224646 ACTTTGAGCTGGGGACTTCTTC 60.225 50.000 0.00 0.00 0.00 2.87
2197 2253 5.491078 TGGGGACTTCTTCAGGTATATTGTT 59.509 40.000 0.00 0.00 0.00 2.83
2198 2254 5.823045 GGGGACTTCTTCAGGTATATTGTTG 59.177 44.000 0.00 0.00 0.00 3.33
2199 2255 5.823045 GGGACTTCTTCAGGTATATTGTTGG 59.177 44.000 0.00 0.00 0.00 3.77
2200 2256 6.352737 GGGACTTCTTCAGGTATATTGTTGGA 60.353 42.308 0.00 0.00 0.00 3.53
2201 2257 7.283329 GGACTTCTTCAGGTATATTGTTGGAT 58.717 38.462 0.00 0.00 0.00 3.41
2202 2258 8.429641 GGACTTCTTCAGGTATATTGTTGGATA 58.570 37.037 0.00 0.00 0.00 2.59
2203 2259 9.482627 GACTTCTTCAGGTATATTGTTGGATAG 57.517 37.037 0.00 0.00 0.00 2.08
2204 2260 7.934120 ACTTCTTCAGGTATATTGTTGGATAGC 59.066 37.037 0.00 0.00 0.00 2.97
2227 2283 8.845413 AGCATCTTATGATCTTCCTTACATTC 57.155 34.615 0.00 0.00 0.00 2.67
2228 2284 8.435187 AGCATCTTATGATCTTCCTTACATTCA 58.565 33.333 0.00 0.00 0.00 2.57
2263 2330 6.682423 ATGATTAAACAGCATGATTCGTGA 57.318 33.333 10.09 0.00 39.69 4.35
2273 2340 4.692625 AGCATGATTCGTGATTATAGGCAC 59.307 41.667 10.09 0.00 0.00 5.01
2274 2341 4.692625 GCATGATTCGTGATTATAGGCACT 59.307 41.667 10.09 0.00 46.37 4.40
2275 2342 5.163913 GCATGATTCGTGATTATAGGCACTC 60.164 44.000 10.09 0.00 41.75 3.51
2276 2343 4.883083 TGATTCGTGATTATAGGCACTCC 58.117 43.478 0.00 0.00 41.75 3.85
2277 2344 4.343814 TGATTCGTGATTATAGGCACTCCA 59.656 41.667 0.00 0.00 41.75 3.86
2278 2345 4.955811 TTCGTGATTATAGGCACTCCAT 57.044 40.909 0.00 0.00 41.75 3.41
2279 2346 4.257267 TCGTGATTATAGGCACTCCATG 57.743 45.455 0.00 0.00 41.75 3.66
2280 2347 3.641436 TCGTGATTATAGGCACTCCATGT 59.359 43.478 0.00 0.00 41.75 3.21
2281 2348 4.100963 TCGTGATTATAGGCACTCCATGTT 59.899 41.667 0.00 0.00 41.75 2.71
2282 2349 4.816385 CGTGATTATAGGCACTCCATGTTT 59.184 41.667 0.00 0.00 41.75 2.83
2283 2350 5.989168 CGTGATTATAGGCACTCCATGTTTA 59.011 40.000 0.00 0.00 41.75 2.01
2284 2351 6.073765 CGTGATTATAGGCACTCCATGTTTAC 60.074 42.308 0.00 0.00 41.75 2.01
2288 2355 0.811281 GGCACTCCATGTTTACCAGC 59.189 55.000 0.00 0.00 0.00 4.85
2309 2376 1.678101 GTCAGGGTTATCATGCAAGGC 59.322 52.381 0.00 0.00 0.00 4.35
2346 2413 5.692654 GGCAGATATTCTCGGTAAACTTCTC 59.307 44.000 0.00 0.00 0.00 2.87
2395 2462 6.260050 TGTTAACTTCCTGCTTTCACTTACAG 59.740 38.462 7.22 0.00 0.00 2.74
2408 2521 9.057089 GCTTTCACTTACAGGCTATTTGTATAT 57.943 33.333 0.00 0.00 31.60 0.86
2413 2526 8.499162 CACTTACAGGCTATTTGTATATTGCTC 58.501 37.037 0.00 0.00 31.60 4.26
2446 2559 9.369904 CTCTCCTAATCGTCTACTAATAGTACC 57.630 40.741 0.00 0.00 0.00 3.34
2447 2560 9.099071 TCTCCTAATCGTCTACTAATAGTACCT 57.901 37.037 0.00 0.00 0.00 3.08
2448 2561 9.369904 CTCCTAATCGTCTACTAATAGTACCTC 57.630 40.741 0.00 0.00 0.00 3.85
2449 2562 8.031864 TCCTAATCGTCTACTAATAGTACCTCG 58.968 40.741 0.00 2.73 0.00 4.63
2450 2563 6.479095 AATCGTCTACTAATAGTACCTCGC 57.521 41.667 0.00 0.00 0.00 5.03
2451 2564 4.948847 TCGTCTACTAATAGTACCTCGCA 58.051 43.478 0.00 0.00 0.00 5.10
2452 2565 5.359756 TCGTCTACTAATAGTACCTCGCAA 58.640 41.667 0.00 0.00 0.00 4.85
2453 2566 5.817296 TCGTCTACTAATAGTACCTCGCAAA 59.183 40.000 0.00 0.00 0.00 3.68
2454 2567 6.316140 TCGTCTACTAATAGTACCTCGCAAAA 59.684 38.462 0.00 0.00 0.00 2.44
2455 2568 6.968904 CGTCTACTAATAGTACCTCGCAAAAA 59.031 38.462 0.00 0.00 0.00 1.94
2484 2597 4.158949 TCGTCTACTAATAGTGGCTGCAAA 59.841 41.667 2.68 0.00 0.00 3.68
2496 2609 9.586435 AATAGTGGCTGCAAATTCTTTTAATAC 57.414 29.630 0.50 0.00 0.00 1.89
2520 2633 4.298103 AGATGAATCTGTCAAAGCTGGT 57.702 40.909 0.00 0.00 40.50 4.00
2526 2639 0.590195 CTGTCAAAGCTGGTCTGTGC 59.410 55.000 0.00 0.00 29.78 4.57
2527 2640 0.819259 TGTCAAAGCTGGTCTGTGCC 60.819 55.000 0.00 0.00 29.78 5.01
2528 2641 1.597854 TCAAAGCTGGTCTGTGCCG 60.598 57.895 0.00 0.00 29.78 5.69
2529 2642 2.281761 AAAGCTGGTCTGTGCCGG 60.282 61.111 0.00 0.00 37.94 6.13
2530 2643 2.818169 AAAGCTGGTCTGTGCCGGA 61.818 57.895 5.05 0.00 37.06 5.14
2531 2644 3.537206 AAGCTGGTCTGTGCCGGAC 62.537 63.158 5.05 0.46 38.88 4.79
2532 2645 4.008933 GCTGGTCTGTGCCGGACT 62.009 66.667 5.05 0.00 39.49 3.85
2533 2646 2.047844 CTGGTCTGTGCCGGACTG 60.048 66.667 5.05 5.08 39.49 3.51
2565 2678 3.511146 TCAAGATGGGCATCCTTTTGAAC 59.489 43.478 0.00 0.00 38.58 3.18
2585 2698 5.048083 TGAACATTCCTGCAATGAAGGTAAC 60.048 40.000 7.24 12.04 44.40 2.50
2628 2741 4.623886 GCTCCAAGATATCACACACTGGAA 60.624 45.833 5.32 0.00 0.00 3.53
2631 2744 5.705441 TCCAAGATATCACACACTGGAAAAC 59.295 40.000 5.32 0.00 0.00 2.43
2639 2755 4.097741 TCACACACTGGAAAACAAATGAGG 59.902 41.667 0.00 0.00 0.00 3.86
2642 2758 5.043248 CACACTGGAAAACAAATGAGGTTC 58.957 41.667 0.00 0.00 0.00 3.62
2647 2763 4.340950 TGGAAAACAAATGAGGTTCAGGAC 59.659 41.667 0.00 0.00 0.00 3.85
2648 2764 4.584743 GGAAAACAAATGAGGTTCAGGACT 59.415 41.667 0.00 0.00 0.00 3.85
2649 2765 5.507985 GGAAAACAAATGAGGTTCAGGACTG 60.508 44.000 0.00 0.00 0.00 3.51
2650 2766 4.437682 AACAAATGAGGTTCAGGACTGA 57.562 40.909 0.00 0.00 37.91 3.41
2651 2767 3.744660 ACAAATGAGGTTCAGGACTGAC 58.255 45.455 0.67 0.00 39.66 3.51
2652 2768 2.738846 CAAATGAGGTTCAGGACTGACG 59.261 50.000 0.67 0.00 39.66 4.35
2654 2801 1.248486 TGAGGTTCAGGACTGACGAG 58.752 55.000 0.67 0.00 39.66 4.18
2657 2804 0.244178 GGTTCAGGACTGACGAGACC 59.756 60.000 0.67 3.50 39.66 3.85
2660 2807 2.361357 AGGACTGACGAGACCCCG 60.361 66.667 0.00 0.00 34.81 5.73
2663 2810 1.321074 GGACTGACGAGACCCCGAAT 61.321 60.000 0.00 0.00 0.00 3.34
2665 2812 0.246635 ACTGACGAGACCCCGAATTG 59.753 55.000 0.00 0.00 0.00 2.32
2667 2814 1.814169 GACGAGACCCCGAATTGGC 60.814 63.158 0.00 0.00 35.87 4.52
2669 2816 2.674754 GAGACCCCGAATTGGCCA 59.325 61.111 0.00 0.00 35.87 5.36
2672 2819 1.605165 GACCCCGAATTGGCCAACA 60.605 57.895 23.27 0.00 35.87 3.33
2674 2821 1.905843 CCCCGAATTGGCCAACACA 60.906 57.895 23.27 0.00 35.87 3.72
2675 2822 1.288752 CCCGAATTGGCCAACACAC 59.711 57.895 23.27 11.32 35.87 3.82
2679 2826 0.318120 GAATTGGCCAACACACCCTG 59.682 55.000 23.27 0.00 0.00 4.45
2682 2829 4.912395 GGCCAACACACCCTGCCA 62.912 66.667 0.00 0.00 41.76 4.92
2730 2877 3.309954 GTCATCGGCATCTTGTAACCTTC 59.690 47.826 0.00 0.00 0.00 3.46
2746 2893 0.803768 CTTCGCGTGATGGAGGTCTG 60.804 60.000 5.77 0.00 0.00 3.51
2762 2909 4.340246 TGCAGCTCCACCAGGCAG 62.340 66.667 0.00 0.00 33.74 4.85
2771 2918 1.739562 CACCAGGCAGAAGCGAGTC 60.740 63.158 0.00 0.00 43.41 3.36
2801 2948 2.181021 GAGTACCCCTGCGTGTCG 59.819 66.667 0.00 0.00 0.00 4.35
2880 3030 0.242825 CTTCGAAGCGTAGGACCACA 59.757 55.000 13.09 0.00 0.00 4.17
2884 3034 0.389948 GAAGCGTAGGACCACACCTG 60.390 60.000 0.00 0.00 40.81 4.00
2889 3039 2.346803 CGTAGGACCACACCTGAATTG 58.653 52.381 0.00 0.00 40.81 2.32
2920 3074 4.913924 CAGTTTCTTGCTTGCTAACACATC 59.086 41.667 0.00 0.00 0.00 3.06
2936 3090 3.244665 ACACATCTCTGCATGGTTCTGAA 60.245 43.478 0.00 0.00 0.00 3.02
2937 3091 3.945921 CACATCTCTGCATGGTTCTGAAT 59.054 43.478 0.00 0.00 0.00 2.57
2938 3092 4.398358 CACATCTCTGCATGGTTCTGAATT 59.602 41.667 0.00 0.00 0.00 2.17
2939 3093 4.639310 ACATCTCTGCATGGTTCTGAATTC 59.361 41.667 0.00 0.00 0.00 2.17
2940 3094 4.564782 TCTCTGCATGGTTCTGAATTCT 57.435 40.909 7.05 0.00 0.00 2.40
2941 3095 4.259356 TCTCTGCATGGTTCTGAATTCTG 58.741 43.478 7.05 6.50 0.00 3.02
2942 3096 4.019950 TCTCTGCATGGTTCTGAATTCTGA 60.020 41.667 10.68 10.68 0.00 3.27
2945 3099 3.949754 TGCATGGTTCTGAATTCTGATCC 59.050 43.478 24.88 24.88 35.50 3.36
2947 3101 4.583489 GCATGGTTCTGAATTCTGATCCAT 59.417 41.667 32.14 32.14 46.32 3.41
2960 3114 3.134623 TCTGATCCATCCTTTGCACGTAT 59.865 43.478 0.00 0.00 0.00 3.06
3163 3317 3.751246 CAACTGCATGGCCACCGG 61.751 66.667 8.16 10.38 0.00 5.28
3192 3346 1.298014 GGAGTTCTGCTGGTGGAGG 59.702 63.158 0.00 0.00 32.15 4.30
3278 3432 2.154567 AGATGTTTCTGGCCATGCAT 57.845 45.000 5.51 8.57 0.00 3.96
3376 3534 9.118236 GTAGCATTATTTTCAAGTTCTGAACAC 57.882 33.333 21.50 2.61 43.90 3.32
3389 3547 3.728845 TCTGAACACCTCTTGCTGTAAC 58.271 45.455 0.00 0.00 0.00 2.50
3406 3570 1.136329 AACACAGGGCCTCCATCAGT 61.136 55.000 0.95 0.00 34.83 3.41
3410 3574 1.542375 AGGGCCTCCATCAGTTGGT 60.542 57.895 0.00 0.00 46.52 3.67
3411 3575 1.379044 GGGCCTCCATCAGTTGGTG 60.379 63.158 0.84 0.00 46.52 4.17
3413 3577 0.251341 GGCCTCCATCAGTTGGTGTT 60.251 55.000 0.00 0.00 46.52 3.32
3523 3687 0.108585 ACAGGCCACACGACATTCTT 59.891 50.000 5.01 0.00 0.00 2.52
3573 3737 7.388776 TCCTACTTCAAATTCTCACTCATGTTG 59.611 37.037 0.00 0.00 0.00 3.33
3580 3744 4.422073 TTCTCACTCATGTTGTGAACCT 57.578 40.909 19.07 0.00 42.85 3.50
3617 3782 6.824704 TCATCACACTATTGAATTCATGCTCA 59.175 34.615 9.40 0.00 0.00 4.26
3640 3813 2.614057 GCCAATAAGTCCGAACTGATGG 59.386 50.000 0.00 0.00 36.82 3.51
3650 3823 1.532921 CGAACTGATGGAGAGAGACGC 60.533 57.143 0.00 0.00 0.00 5.19
3663 3836 4.871513 AGAGAGACGCGCAATATATTTCA 58.128 39.130 5.73 0.00 0.00 2.69
3672 3845 3.414101 CGCAATATATTTCAACACACGCG 59.586 43.478 3.53 3.53 0.00 6.01
3711 3884 6.753279 ACAAGTGTGTGATTGATTTTCAGTTG 59.247 34.615 0.00 0.00 39.27 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.085619 CGTCGTTTTTGCCATTTTCTGAAG 60.086 41.667 0.00 0.00 0.00 3.02
1 2 3.794028 CGTCGTTTTTGCCATTTTCTGAA 59.206 39.130 0.00 0.00 0.00 3.02
2 3 3.367607 CGTCGTTTTTGCCATTTTCTGA 58.632 40.909 0.00 0.00 0.00 3.27
3 4 2.470999 CCGTCGTTTTTGCCATTTTCTG 59.529 45.455 0.00 0.00 0.00 3.02
4 5 2.544903 CCCGTCGTTTTTGCCATTTTCT 60.545 45.455 0.00 0.00 0.00 2.52
5 6 1.790043 CCCGTCGTTTTTGCCATTTTC 59.210 47.619 0.00 0.00 0.00 2.29
6 7 1.859383 CCCGTCGTTTTTGCCATTTT 58.141 45.000 0.00 0.00 0.00 1.82
7 8 0.598942 GCCCGTCGTTTTTGCCATTT 60.599 50.000 0.00 0.00 0.00 2.32
8 9 1.006688 GCCCGTCGTTTTTGCCATT 60.007 52.632 0.00 0.00 0.00 3.16
9 10 2.648454 GCCCGTCGTTTTTGCCAT 59.352 55.556 0.00 0.00 0.00 4.40
10 11 3.597728 GGCCCGTCGTTTTTGCCA 61.598 61.111 0.00 0.00 41.76 4.92
11 12 4.351938 GGGCCCGTCGTTTTTGCC 62.352 66.667 5.69 0.00 41.42 4.52
12 13 3.292159 AGGGCCCGTCGTTTTTGC 61.292 61.111 18.44 0.00 0.00 3.68
13 14 2.642700 CAGGGCCCGTCGTTTTTG 59.357 61.111 18.44 1.82 0.00 2.44
14 15 2.596338 CCAGGGCCCGTCGTTTTT 60.596 61.111 18.44 0.00 0.00 1.94
38 39 1.468914 GCCTAGTTTTTGAGCCCGAAG 59.531 52.381 0.00 0.00 0.00 3.79
39 40 1.530323 GCCTAGTTTTTGAGCCCGAA 58.470 50.000 0.00 0.00 0.00 4.30
40 41 0.322187 GGCCTAGTTTTTGAGCCCGA 60.322 55.000 0.00 0.00 37.66 5.14
41 42 2.180674 GGCCTAGTTTTTGAGCCCG 58.819 57.895 0.00 0.00 37.66 6.13
43 44 0.322187 TCGGGCCTAGTTTTTGAGCC 60.322 55.000 0.84 0.00 43.09 4.70
44 45 1.087501 CTCGGGCCTAGTTTTTGAGC 58.912 55.000 0.84 0.00 0.00 4.26
45 46 1.087501 GCTCGGGCCTAGTTTTTGAG 58.912 55.000 0.84 1.81 0.00 3.02
46 47 3.243128 GCTCGGGCCTAGTTTTTGA 57.757 52.632 0.84 0.00 0.00 2.69
92 93 1.376609 CCCGAAAAAGCCCGATCTGG 61.377 60.000 0.00 0.00 37.55 3.86
93 94 1.993369 GCCCGAAAAAGCCCGATCTG 61.993 60.000 0.00 0.00 0.00 2.90
94 95 1.749258 GCCCGAAAAAGCCCGATCT 60.749 57.895 0.00 0.00 0.00 2.75
95 96 2.771639 GGCCCGAAAAAGCCCGATC 61.772 63.158 0.00 0.00 43.76 3.69
96 97 2.754254 GGCCCGAAAAAGCCCGAT 60.754 61.111 0.00 0.00 43.76 4.18
126 127 3.704231 CTGACCATGGGAAGGCCGG 62.704 68.421 18.09 0.00 33.83 6.13
127 128 2.124570 CTGACCATGGGAAGGCCG 60.125 66.667 18.09 0.00 33.83 6.13
128 129 2.276740 CCTGACCATGGGAAGGCC 59.723 66.667 18.09 0.00 0.00 5.19
129 130 1.077429 GTCCTGACCATGGGAAGGC 60.077 63.158 23.88 17.04 32.75 4.35
130 131 1.765314 CTAGTCCTGACCATGGGAAGG 59.235 57.143 23.07 23.07 33.01 3.46
131 132 1.765314 CCTAGTCCTGACCATGGGAAG 59.235 57.143 18.09 12.66 33.01 3.46
132 133 1.879575 CCTAGTCCTGACCATGGGAA 58.120 55.000 18.09 2.17 33.01 3.97
133 134 0.691078 GCCTAGTCCTGACCATGGGA 60.691 60.000 18.09 0.00 0.00 4.37
134 135 0.982852 TGCCTAGTCCTGACCATGGG 60.983 60.000 18.09 0.00 0.00 4.00
135 136 0.179000 GTGCCTAGTCCTGACCATGG 59.821 60.000 11.19 11.19 0.00 3.66
136 137 0.179100 CGTGCCTAGTCCTGACCATG 60.179 60.000 0.00 0.00 0.00 3.66
137 138 0.324368 TCGTGCCTAGTCCTGACCAT 60.324 55.000 0.00 0.00 0.00 3.55
138 139 1.076014 TCGTGCCTAGTCCTGACCA 59.924 57.895 0.00 0.00 0.00 4.02
139 140 1.511768 GTCGTGCCTAGTCCTGACC 59.488 63.158 0.00 0.00 0.00 4.02
140 141 1.248785 TGGTCGTGCCTAGTCCTGAC 61.249 60.000 0.00 0.00 38.35 3.51
141 142 0.965866 CTGGTCGTGCCTAGTCCTGA 60.966 60.000 0.00 0.00 38.35 3.86
142 143 1.513158 CTGGTCGTGCCTAGTCCTG 59.487 63.158 0.00 0.00 38.35 3.86
143 144 2.352032 GCTGGTCGTGCCTAGTCCT 61.352 63.158 0.00 0.00 38.35 3.85
144 145 2.167398 TTGCTGGTCGTGCCTAGTCC 62.167 60.000 0.00 0.00 38.35 3.85
145 146 0.320421 TTTGCTGGTCGTGCCTAGTC 60.320 55.000 0.00 0.00 38.35 2.59
146 147 0.324943 ATTTGCTGGTCGTGCCTAGT 59.675 50.000 0.00 0.00 38.35 2.57
147 148 1.009829 GATTTGCTGGTCGTGCCTAG 58.990 55.000 1.06 0.00 38.35 3.02
148 149 0.392461 GGATTTGCTGGTCGTGCCTA 60.392 55.000 1.06 0.00 38.35 3.93
149 150 1.675641 GGATTTGCTGGTCGTGCCT 60.676 57.895 1.06 0.00 38.35 4.75
150 151 2.877691 GGATTTGCTGGTCGTGCC 59.122 61.111 0.00 0.00 37.90 5.01
151 152 2.480555 CGGATTTGCTGGTCGTGC 59.519 61.111 0.00 0.00 0.00 5.34
152 153 2.480555 GCGGATTTGCTGGTCGTG 59.519 61.111 0.00 0.00 0.00 4.35
153 154 3.118454 CGCGGATTTGCTGGTCGT 61.118 61.111 0.00 0.00 0.00 4.34
154 155 3.083600 GACGCGGATTTGCTGGTCG 62.084 63.158 12.47 0.00 0.00 4.79
155 156 1.696832 GAGACGCGGATTTGCTGGTC 61.697 60.000 12.47 0.00 0.00 4.02
156 157 1.741770 GAGACGCGGATTTGCTGGT 60.742 57.895 12.47 0.00 0.00 4.00
157 158 1.424493 GAGAGACGCGGATTTGCTGG 61.424 60.000 12.47 0.00 0.00 4.85
158 159 0.737367 TGAGAGACGCGGATTTGCTG 60.737 55.000 12.47 0.00 0.00 4.41
159 160 0.737715 GTGAGAGACGCGGATTTGCT 60.738 55.000 12.47 0.00 0.00 3.91
160 161 1.710339 GTGAGAGACGCGGATTTGC 59.290 57.895 12.47 0.00 0.00 3.68
161 162 1.991430 CGTGAGAGACGCGGATTTG 59.009 57.895 12.47 0.00 46.86 2.32
162 163 4.478195 CGTGAGAGACGCGGATTT 57.522 55.556 12.47 0.00 46.86 2.17
170 171 3.063045 ACGGTTTTGTTTTCGTGAGAGAC 59.937 43.478 0.00 0.00 43.69 3.36
171 172 3.264104 ACGGTTTTGTTTTCGTGAGAGA 58.736 40.909 0.00 0.00 43.69 3.10
172 173 3.668596 ACGGTTTTGTTTTCGTGAGAG 57.331 42.857 0.00 0.00 43.69 3.20
177 178 0.812549 AGGCACGGTTTTGTTTTCGT 59.187 45.000 0.00 0.00 36.19 3.85
178 179 1.064952 AGAGGCACGGTTTTGTTTTCG 59.935 47.619 0.00 0.00 0.00 3.46
179 180 2.098443 TGAGAGGCACGGTTTTGTTTTC 59.902 45.455 0.00 0.00 0.00 2.29
180 181 2.096248 TGAGAGGCACGGTTTTGTTTT 58.904 42.857 0.00 0.00 0.00 2.43
181 182 1.757682 TGAGAGGCACGGTTTTGTTT 58.242 45.000 0.00 0.00 0.00 2.83
182 183 1.981256 ATGAGAGGCACGGTTTTGTT 58.019 45.000 0.00 0.00 0.00 2.83
183 184 2.851263 TATGAGAGGCACGGTTTTGT 57.149 45.000 0.00 0.00 0.00 2.83
184 185 4.215399 TCTTTTATGAGAGGCACGGTTTTG 59.785 41.667 0.00 0.00 0.00 2.44
185 186 4.394729 TCTTTTATGAGAGGCACGGTTTT 58.605 39.130 0.00 0.00 0.00 2.43
186 187 4.015872 TCTTTTATGAGAGGCACGGTTT 57.984 40.909 0.00 0.00 0.00 3.27
187 188 3.695830 TCTTTTATGAGAGGCACGGTT 57.304 42.857 0.00 0.00 0.00 4.44
188 189 3.695830 TTCTTTTATGAGAGGCACGGT 57.304 42.857 0.00 0.00 0.00 4.83
189 190 5.371115 TTTTTCTTTTATGAGAGGCACGG 57.629 39.130 0.00 0.00 0.00 4.94
232 233 0.306533 TTTGTTTTCGTGAGAGGCGC 59.693 50.000 0.00 0.00 43.69 6.53
233 234 2.372350 GTTTTGTTTTCGTGAGAGGCG 58.628 47.619 0.00 0.00 43.69 5.52
234 235 2.727777 GGTTTTGTTTTCGTGAGAGGC 58.272 47.619 0.00 0.00 43.69 4.70
235 236 2.353579 ACGGTTTTGTTTTCGTGAGAGG 59.646 45.455 0.00 0.00 43.69 3.69
236 237 3.668596 ACGGTTTTGTTTTCGTGAGAG 57.331 42.857 0.00 0.00 43.69 3.20
241 242 0.812549 AGGCACGGTTTTGTTTTCGT 59.187 45.000 0.00 0.00 36.19 3.85
242 243 1.064952 AGAGGCACGGTTTTGTTTTCG 59.935 47.619 0.00 0.00 0.00 3.46
243 244 2.857748 CAAGAGGCACGGTTTTGTTTTC 59.142 45.455 0.00 0.00 0.00 2.29
244 245 2.887337 CAAGAGGCACGGTTTTGTTTT 58.113 42.857 0.00 0.00 0.00 2.43
245 246 1.470805 GCAAGAGGCACGGTTTTGTTT 60.471 47.619 0.00 0.00 43.97 2.83
246 247 0.102300 GCAAGAGGCACGGTTTTGTT 59.898 50.000 0.00 0.00 43.97 2.83
247 248 1.733526 GCAAGAGGCACGGTTTTGT 59.266 52.632 0.00 0.00 43.97 2.83
248 249 4.633980 GCAAGAGGCACGGTTTTG 57.366 55.556 0.00 0.00 43.97 2.44
260 261 7.433680 GTTTTCTTATTTTCCCTTCTGCAAGA 58.566 34.615 0.00 0.00 44.68 3.02
261 262 6.363357 CGTTTTCTTATTTTCCCTTCTGCAAG 59.637 38.462 0.00 0.00 0.00 4.01
262 263 6.039941 TCGTTTTCTTATTTTCCCTTCTGCAA 59.960 34.615 0.00 0.00 0.00 4.08
263 264 5.533154 TCGTTTTCTTATTTTCCCTTCTGCA 59.467 36.000 0.00 0.00 0.00 4.41
264 265 5.856986 GTCGTTTTCTTATTTTCCCTTCTGC 59.143 40.000 0.00 0.00 0.00 4.26
265 266 7.203255 AGTCGTTTTCTTATTTTCCCTTCTG 57.797 36.000 0.00 0.00 0.00 3.02
266 267 7.720074 AGAAGTCGTTTTCTTATTTTCCCTTCT 59.280 33.333 0.00 0.00 33.74 2.85
267 268 7.872881 AGAAGTCGTTTTCTTATTTTCCCTTC 58.127 34.615 0.00 0.00 33.74 3.46
268 269 7.818997 AGAAGTCGTTTTCTTATTTTCCCTT 57.181 32.000 0.00 0.00 33.74 3.95
269 270 9.516546 AATAGAAGTCGTTTTCTTATTTTCCCT 57.483 29.630 8.92 0.00 38.35 4.20
278 279 9.678941 GAAATGGAAAATAGAAGTCGTTTTCTT 57.321 29.630 16.97 9.28 40.14 2.52
279 280 8.297426 GGAAATGGAAAATAGAAGTCGTTTTCT 58.703 33.333 16.97 8.71 40.14 2.52
280 281 7.270579 CGGAAATGGAAAATAGAAGTCGTTTTC 59.729 37.037 12.59 12.59 39.76 2.29
281 282 7.040961 TCGGAAATGGAAAATAGAAGTCGTTTT 60.041 33.333 0.00 0.00 0.00 2.43
282 283 6.428771 TCGGAAATGGAAAATAGAAGTCGTTT 59.571 34.615 0.00 0.00 0.00 3.60
283 284 5.935789 TCGGAAATGGAAAATAGAAGTCGTT 59.064 36.000 0.00 0.00 0.00 3.85
284 285 5.484715 TCGGAAATGGAAAATAGAAGTCGT 58.515 37.500 0.00 0.00 0.00 4.34
285 286 5.810587 TCTCGGAAATGGAAAATAGAAGTCG 59.189 40.000 0.00 0.00 0.00 4.18
286 287 7.611213 TTCTCGGAAATGGAAAATAGAAGTC 57.389 36.000 0.00 0.00 0.00 3.01
287 288 7.447238 TGTTTCTCGGAAATGGAAAATAGAAGT 59.553 33.333 3.00 0.00 32.00 3.01
288 289 7.750903 GTGTTTCTCGGAAATGGAAAATAGAAG 59.249 37.037 3.00 0.00 32.00 2.85
289 290 7.572353 CGTGTTTCTCGGAAATGGAAAATAGAA 60.572 37.037 3.00 0.00 32.00 2.10
290 291 6.128391 CGTGTTTCTCGGAAATGGAAAATAGA 60.128 38.462 3.00 0.00 32.00 1.98
291 292 6.021596 CGTGTTTCTCGGAAATGGAAAATAG 58.978 40.000 3.00 0.00 32.00 1.73
292 293 5.933790 CGTGTTTCTCGGAAATGGAAAATA 58.066 37.500 3.00 0.00 32.00 1.40
293 294 4.794169 CGTGTTTCTCGGAAATGGAAAAT 58.206 39.130 3.00 0.00 32.00 1.82
294 295 4.217754 CGTGTTTCTCGGAAATGGAAAA 57.782 40.909 3.00 0.00 32.00 2.29
295 296 3.889196 CGTGTTTCTCGGAAATGGAAA 57.111 42.857 3.00 0.00 0.00 3.13
316 317 4.373116 TTCCACGAGAGGCACGGC 62.373 66.667 0.00 0.00 34.93 5.68
317 318 2.125912 CTTCCACGAGAGGCACGG 60.126 66.667 0.00 0.00 34.93 4.94
318 319 2.125912 CCTTCCACGAGAGGCACG 60.126 66.667 0.00 0.00 0.00 5.34
319 320 0.250513 ATTCCTTCCACGAGAGGCAC 59.749 55.000 0.00 0.00 0.00 5.01
320 321 0.984230 AATTCCTTCCACGAGAGGCA 59.016 50.000 0.00 0.00 0.00 4.75
321 322 1.657822 GAATTCCTTCCACGAGAGGC 58.342 55.000 0.00 0.00 0.00 4.70
322 323 1.204941 ACGAATTCCTTCCACGAGAGG 59.795 52.381 0.00 0.00 0.00 3.69
323 324 2.263077 CACGAATTCCTTCCACGAGAG 58.737 52.381 0.00 0.00 0.00 3.20
324 325 1.671850 GCACGAATTCCTTCCACGAGA 60.672 52.381 0.00 0.00 0.00 4.04
325 326 0.721718 GCACGAATTCCTTCCACGAG 59.278 55.000 0.00 0.00 0.00 4.18
326 327 0.672401 GGCACGAATTCCTTCCACGA 60.672 55.000 0.00 0.00 0.00 4.35
327 328 0.673644 AGGCACGAATTCCTTCCACG 60.674 55.000 0.00 0.00 0.00 4.94
328 329 1.087501 GAGGCACGAATTCCTTCCAC 58.912 55.000 0.00 0.00 31.71 4.02
329 330 0.035439 GGAGGCACGAATTCCTTCCA 60.035 55.000 0.00 0.00 31.71 3.53
330 331 0.748367 GGGAGGCACGAATTCCTTCC 60.748 60.000 0.00 1.56 40.76 3.46
331 332 0.035439 TGGGAGGCACGAATTCCTTC 60.035 55.000 0.00 0.00 31.71 3.46
332 333 0.322546 GTGGGAGGCACGAATTCCTT 60.323 55.000 0.00 0.00 31.71 3.36
333 334 1.299976 GTGGGAGGCACGAATTCCT 59.700 57.895 0.00 0.00 34.90 3.36
334 335 1.002624 TGTGGGAGGCACGAATTCC 60.003 57.895 0.00 0.00 0.00 3.01
335 336 0.036388 TCTGTGGGAGGCACGAATTC 60.036 55.000 0.00 0.00 0.00 2.17
336 337 0.400213 TTCTGTGGGAGGCACGAATT 59.600 50.000 0.00 0.00 0.00 2.17
337 338 0.036010 CTTCTGTGGGAGGCACGAAT 60.036 55.000 0.00 0.00 0.00 3.34
338 339 1.118965 TCTTCTGTGGGAGGCACGAA 61.119 55.000 0.00 0.00 0.00 3.85
339 340 1.118965 TTCTTCTGTGGGAGGCACGA 61.119 55.000 0.00 0.00 0.00 4.35
340 341 0.250295 TTTCTTCTGTGGGAGGCACG 60.250 55.000 0.00 0.00 0.00 5.34
341 342 1.882623 CTTTTCTTCTGTGGGAGGCAC 59.117 52.381 0.00 0.00 0.00 5.01
342 343 1.774254 TCTTTTCTTCTGTGGGAGGCA 59.226 47.619 0.00 0.00 0.00 4.75
343 344 2.568623 TCTTTTCTTCTGTGGGAGGC 57.431 50.000 0.00 0.00 0.00 4.70
344 345 4.357918 TCTTCTTTTCTTCTGTGGGAGG 57.642 45.455 0.00 0.00 0.00 4.30
345 346 5.372373 ACTTCTTCTTTTCTTCTGTGGGAG 58.628 41.667 0.00 0.00 0.00 4.30
346 347 5.373812 ACTTCTTCTTTTCTTCTGTGGGA 57.626 39.130 0.00 0.00 0.00 4.37
347 348 6.525629 TCTACTTCTTCTTTTCTTCTGTGGG 58.474 40.000 0.00 0.00 0.00 4.61
348 349 7.437748 TCTCTACTTCTTCTTTTCTTCTGTGG 58.562 38.462 0.00 0.00 0.00 4.17
349 350 8.879342 TTCTCTACTTCTTCTTTTCTTCTGTG 57.121 34.615 0.00 0.00 0.00 3.66
350 351 9.892130 TTTTCTCTACTTCTTCTTTTCTTCTGT 57.108 29.630 0.00 0.00 0.00 3.41
353 354 9.605955 GCATTTTCTCTACTTCTTCTTTTCTTC 57.394 33.333 0.00 0.00 0.00 2.87
354 355 8.286097 CGCATTTTCTCTACTTCTTCTTTTCTT 58.714 33.333 0.00 0.00 0.00 2.52
355 356 7.442666 ACGCATTTTCTCTACTTCTTCTTTTCT 59.557 33.333 0.00 0.00 0.00 2.52
356 357 7.577107 ACGCATTTTCTCTACTTCTTCTTTTC 58.423 34.615 0.00 0.00 0.00 2.29
357 358 7.497925 ACGCATTTTCTCTACTTCTTCTTTT 57.502 32.000 0.00 0.00 0.00 2.27
358 359 7.497925 AACGCATTTTCTCTACTTCTTCTTT 57.502 32.000 0.00 0.00 0.00 2.52
359 360 7.497925 AAACGCATTTTCTCTACTTCTTCTT 57.502 32.000 0.00 0.00 0.00 2.52
360 361 7.497925 AAAACGCATTTTCTCTACTTCTTCT 57.502 32.000 0.00 0.00 32.29 2.85
386 387 2.031465 GTGCCCCTCGAAAACCGA 59.969 61.111 0.00 0.00 46.35 4.69
387 388 3.053896 GGTGCCCCTCGAAAACCG 61.054 66.667 0.00 0.00 40.25 4.44
388 389 3.053896 CGGTGCCCCTCGAAAACC 61.054 66.667 0.00 0.00 0.00 3.27
389 390 1.895231 AACGGTGCCCCTCGAAAAC 60.895 57.895 0.00 0.00 0.00 2.43
390 391 1.894756 CAACGGTGCCCCTCGAAAA 60.895 57.895 0.00 0.00 0.00 2.29
391 392 2.281208 CAACGGTGCCCCTCGAAA 60.281 61.111 0.00 0.00 0.00 3.46
392 393 3.552384 ACAACGGTGCCCCTCGAA 61.552 61.111 0.00 0.00 0.00 3.71
393 394 4.308458 CACAACGGTGCCCCTCGA 62.308 66.667 0.00 0.00 38.37 4.04
402 403 1.594293 CCACGAGAAGCACAACGGT 60.594 57.895 0.00 0.00 0.00 4.83
403 404 0.878523 TTCCACGAGAAGCACAACGG 60.879 55.000 0.00 0.00 0.00 4.44
404 405 0.508641 CTTCCACGAGAAGCACAACG 59.491 55.000 6.95 0.00 45.38 4.10
412 413 1.270625 ACGGATTTGCTTCCACGAGAA 60.271 47.619 0.00 0.00 35.34 2.87
413 414 0.320374 ACGGATTTGCTTCCACGAGA 59.680 50.000 0.00 0.00 35.34 4.04
414 415 1.659098 GTACGGATTTGCTTCCACGAG 59.341 52.381 0.00 0.00 35.34 4.18
415 416 1.673626 GGTACGGATTTGCTTCCACGA 60.674 52.381 0.00 0.00 35.34 4.35
416 417 0.725117 GGTACGGATTTGCTTCCACG 59.275 55.000 0.00 0.00 35.34 4.94
417 418 2.007608 GAGGTACGGATTTGCTTCCAC 58.992 52.381 0.00 0.00 35.34 4.02
418 419 1.906574 AGAGGTACGGATTTGCTTCCA 59.093 47.619 0.00 0.00 35.34 3.53
419 420 2.168728 AGAGAGGTACGGATTTGCTTCC 59.831 50.000 0.00 0.00 0.00 3.46
420 421 3.449632 GAGAGAGGTACGGATTTGCTTC 58.550 50.000 0.00 0.00 0.00 3.86
421 422 2.159226 CGAGAGAGGTACGGATTTGCTT 60.159 50.000 0.00 0.00 0.00 3.91
422 423 1.405821 CGAGAGAGGTACGGATTTGCT 59.594 52.381 0.00 0.00 0.00 3.91
423 424 1.404391 TCGAGAGAGGTACGGATTTGC 59.596 52.381 0.00 0.00 34.84 3.68
424 425 3.777465 TTCGAGAGAGGTACGGATTTG 57.223 47.619 0.00 0.00 43.69 2.32
425 426 3.429135 GCTTTCGAGAGAGGTACGGATTT 60.429 47.826 7.23 0.00 43.69 2.17
426 427 2.099427 GCTTTCGAGAGAGGTACGGATT 59.901 50.000 7.23 0.00 43.69 3.01
427 428 1.677052 GCTTTCGAGAGAGGTACGGAT 59.323 52.381 7.23 0.00 43.69 4.18
428 429 1.093159 GCTTTCGAGAGAGGTACGGA 58.907 55.000 7.23 0.00 43.69 4.69
429 430 0.809385 TGCTTTCGAGAGAGGTACGG 59.191 55.000 7.23 0.00 43.69 4.02
430 431 2.631418 TTGCTTTCGAGAGAGGTACG 57.369 50.000 7.23 0.00 43.69 3.67
431 432 4.557205 TCTTTTGCTTTCGAGAGAGGTAC 58.443 43.478 7.23 0.00 43.69 3.34
432 433 4.866508 TCTTTTGCTTTCGAGAGAGGTA 57.133 40.909 7.23 0.00 43.69 3.08
433 434 3.753294 TCTTTTGCTTTCGAGAGAGGT 57.247 42.857 7.23 0.00 43.69 3.85
434 435 5.424121 TTTTCTTTTGCTTTCGAGAGAGG 57.576 39.130 7.23 0.00 43.69 3.69
435 436 6.719365 TCTTTTTCTTTTGCTTTCGAGAGAG 58.281 36.000 7.23 0.00 43.69 3.20
436 437 6.677781 TCTTTTTCTTTTGCTTTCGAGAGA 57.322 33.333 7.23 0.00 39.20 3.10
437 438 7.740519 TTTCTTTTTCTTTTGCTTTCGAGAG 57.259 32.000 0.00 0.00 0.00 3.20
438 439 8.432359 GTTTTTCTTTTTCTTTTGCTTTCGAGA 58.568 29.630 0.00 0.00 0.00 4.04
439 440 8.220434 TGTTTTTCTTTTTCTTTTGCTTTCGAG 58.780 29.630 0.00 0.00 0.00 4.04
440 441 8.007152 GTGTTTTTCTTTTTCTTTTGCTTTCGA 58.993 29.630 0.00 0.00 0.00 3.71
441 442 8.009409 AGTGTTTTTCTTTTTCTTTTGCTTTCG 58.991 29.630 0.00 0.00 0.00 3.46
442 443 9.663904 AAGTGTTTTTCTTTTTCTTTTGCTTTC 57.336 25.926 0.00 0.00 0.00 2.62
469 470 3.255642 CCATGCCTCTCGGAAAAGAAAAA 59.744 43.478 0.00 0.00 0.00 1.94
470 471 2.819608 CCATGCCTCTCGGAAAAGAAAA 59.180 45.455 0.00 0.00 0.00 2.29
471 472 2.224769 ACCATGCCTCTCGGAAAAGAAA 60.225 45.455 0.00 0.00 0.00 2.52
472 473 1.351017 ACCATGCCTCTCGGAAAAGAA 59.649 47.619 0.00 0.00 0.00 2.52
473 474 0.984230 ACCATGCCTCTCGGAAAAGA 59.016 50.000 0.00 0.00 0.00 2.52
474 475 1.826385 AACCATGCCTCTCGGAAAAG 58.174 50.000 0.00 0.00 0.00 2.27
475 476 3.644966 ATAACCATGCCTCTCGGAAAA 57.355 42.857 0.00 0.00 0.00 2.29
476 477 3.181458 GGTATAACCATGCCTCTCGGAAA 60.181 47.826 0.00 0.00 38.42 3.13
477 478 2.367567 GGTATAACCATGCCTCTCGGAA 59.632 50.000 0.00 0.00 38.42 4.30
478 479 1.968493 GGTATAACCATGCCTCTCGGA 59.032 52.381 0.00 0.00 38.42 4.55
479 480 1.971357 AGGTATAACCATGCCTCTCGG 59.029 52.381 0.00 0.00 43.17 4.63
485 486 1.873591 CGCAAGAGGTATAACCATGCC 59.126 52.381 12.78 0.00 41.95 4.40
486 487 1.873591 CCGCAAGAGGTATAACCATGC 59.126 52.381 9.95 9.95 41.95 4.06
487 488 3.469008 TCCGCAAGAGGTATAACCATG 57.531 47.619 0.00 0.00 41.95 3.66
488 489 3.744530 GCTTCCGCAAGAGGTATAACCAT 60.745 47.826 0.00 0.00 37.73 3.55
489 490 2.419574 GCTTCCGCAAGAGGTATAACCA 60.420 50.000 0.00 0.00 37.73 3.67
490 491 2.210961 GCTTCCGCAAGAGGTATAACC 58.789 52.381 0.00 0.00 43.02 2.85
491 492 2.901249 TGCTTCCGCAAGAGGTATAAC 58.099 47.619 0.00 0.00 44.62 1.89
533 534 4.142271 TGCTTTGCTCTCGGAAAAGAAAAA 60.142 37.500 4.51 0.00 41.91 1.94
534 535 3.380004 TGCTTTGCTCTCGGAAAAGAAAA 59.620 39.130 4.51 0.10 41.91 2.29
535 536 2.948979 TGCTTTGCTCTCGGAAAAGAAA 59.051 40.909 4.51 0.00 41.91 2.52
536 537 2.571212 TGCTTTGCTCTCGGAAAAGAA 58.429 42.857 4.51 0.00 41.91 2.52
537 538 2.254546 TGCTTTGCTCTCGGAAAAGA 57.745 45.000 4.51 0.00 41.91 2.52
538 539 3.354089 TTTGCTTTGCTCTCGGAAAAG 57.646 42.857 0.00 0.00 42.17 2.27
539 540 3.305335 GGATTTGCTTTGCTCTCGGAAAA 60.305 43.478 0.00 0.00 29.77 2.29
540 541 2.228822 GGATTTGCTTTGCTCTCGGAAA 59.771 45.455 0.00 0.00 0.00 3.13
541 542 1.812571 GGATTTGCTTTGCTCTCGGAA 59.187 47.619 0.00 0.00 0.00 4.30
542 543 1.003580 AGGATTTGCTTTGCTCTCGGA 59.996 47.619 0.00 0.00 0.00 4.55
543 544 1.457346 AGGATTTGCTTTGCTCTCGG 58.543 50.000 0.00 0.00 0.00 4.63
544 545 3.181506 GGTAAGGATTTGCTTTGCTCTCG 60.182 47.826 0.00 0.00 0.00 4.04
545 546 4.013050 AGGTAAGGATTTGCTTTGCTCTC 58.987 43.478 0.00 0.00 0.00 3.20
546 547 4.013050 GAGGTAAGGATTTGCTTTGCTCT 58.987 43.478 0.00 0.00 0.00 4.09
547 548 4.013050 AGAGGTAAGGATTTGCTTTGCTC 58.987 43.478 0.00 0.00 0.00 4.26
548 549 4.013050 GAGAGGTAAGGATTTGCTTTGCT 58.987 43.478 0.00 0.00 0.00 3.91
549 550 3.181506 CGAGAGGTAAGGATTTGCTTTGC 60.182 47.826 0.00 0.00 0.00 3.68
550 551 3.181506 GCGAGAGGTAAGGATTTGCTTTG 60.182 47.826 0.00 0.00 0.00 2.77
551 552 3.010420 GCGAGAGGTAAGGATTTGCTTT 58.990 45.455 0.00 0.00 0.00 3.51
552 553 2.633488 GCGAGAGGTAAGGATTTGCTT 58.367 47.619 0.00 0.00 0.00 3.91
553 554 1.471676 CGCGAGAGGTAAGGATTTGCT 60.472 52.381 0.00 0.00 0.00 3.91
554 555 0.931005 CGCGAGAGGTAAGGATTTGC 59.069 55.000 0.00 0.00 0.00 3.68
555 556 1.136305 TCCGCGAGAGGTAAGGATTTG 59.864 52.381 8.23 0.00 0.00 2.32
556 557 1.481871 TCCGCGAGAGGTAAGGATTT 58.518 50.000 8.23 0.00 0.00 2.17
557 558 1.409427 CTTCCGCGAGAGGTAAGGATT 59.591 52.381 8.23 0.00 0.00 3.01
558 559 1.033574 CTTCCGCGAGAGGTAAGGAT 58.966 55.000 8.23 0.00 0.00 3.24
559 560 1.664321 GCTTCCGCGAGAGGTAAGGA 61.664 60.000 8.23 0.00 0.00 3.36
560 561 1.227002 GCTTCCGCGAGAGGTAAGG 60.227 63.158 8.23 0.00 0.00 2.69
561 562 0.108804 TTGCTTCCGCGAGAGGTAAG 60.109 55.000 8.23 2.34 39.65 2.34
562 563 0.319083 TTTGCTTCCGCGAGAGGTAA 59.681 50.000 8.23 6.91 39.65 2.85
563 564 0.319083 TTTTGCTTCCGCGAGAGGTA 59.681 50.000 8.23 0.00 39.65 3.08
564 565 0.534203 TTTTTGCTTCCGCGAGAGGT 60.534 50.000 8.23 0.00 39.65 3.85
565 566 0.166814 CTTTTTGCTTCCGCGAGAGG 59.833 55.000 8.23 4.88 39.65 3.69
566 567 0.166814 CCTTTTTGCTTCCGCGAGAG 59.833 55.000 8.23 5.93 39.65 3.20
567 568 0.250124 TCCTTTTTGCTTCCGCGAGA 60.250 50.000 8.23 0.00 39.65 4.04
568 569 0.591170 TTCCTTTTTGCTTCCGCGAG 59.409 50.000 8.23 0.00 39.65 5.03
569 570 1.025812 TTTCCTTTTTGCTTCCGCGA 58.974 45.000 8.23 0.00 39.65 5.87
570 571 1.846541 TTTTCCTTTTTGCTTCCGCG 58.153 45.000 0.00 0.00 39.65 6.46
602 603 2.791849 CGTGCCGTTCGGAAAAGAAAAA 60.792 45.455 15.69 0.00 0.00 1.94
603 604 1.268133 CGTGCCGTTCGGAAAAGAAAA 60.268 47.619 15.69 0.00 0.00 2.29
604 605 0.305313 CGTGCCGTTCGGAAAAGAAA 59.695 50.000 15.69 0.00 0.00 2.52
605 606 1.935925 CGTGCCGTTCGGAAAAGAA 59.064 52.632 15.69 0.00 0.00 2.52
606 607 3.632700 CGTGCCGTTCGGAAAAGA 58.367 55.556 15.69 0.00 0.00 2.52
624 625 1.912371 GCTTTCACAGTAGGCACGGC 61.912 60.000 0.00 0.00 0.00 5.68
625 626 0.602638 TGCTTTCACAGTAGGCACGG 60.603 55.000 0.00 0.00 0.00 4.94
626 627 1.225855 TTGCTTTCACAGTAGGCACG 58.774 50.000 0.00 0.00 32.47 5.34
627 628 3.708563 TTTTGCTTTCACAGTAGGCAC 57.291 42.857 0.00 0.00 32.47 5.01
668 669 6.323266 TCGACAAAACAAAATCGAGGAAAAA 58.677 32.000 0.00 0.00 38.59 1.94
669 670 5.881447 TCGACAAAACAAAATCGAGGAAAA 58.119 33.333 0.00 0.00 38.59 2.29
670 671 5.487153 TCGACAAAACAAAATCGAGGAAA 57.513 34.783 0.00 0.00 38.59 3.13
671 672 5.487153 TTCGACAAAACAAAATCGAGGAA 57.513 34.783 0.00 0.00 43.78 3.36
672 673 5.487153 TTTCGACAAAACAAAATCGAGGA 57.513 34.783 0.00 0.00 43.78 3.71
673 674 5.741982 ACTTTTCGACAAAACAAAATCGAGG 59.258 36.000 0.00 0.00 43.78 4.63
674 675 6.467682 TGACTTTTCGACAAAACAAAATCGAG 59.532 34.615 0.00 0.00 43.78 4.04
675 676 6.315551 TGACTTTTCGACAAAACAAAATCGA 58.684 32.000 0.00 0.00 41.55 3.59
676 677 6.547493 TGACTTTTCGACAAAACAAAATCG 57.453 33.333 0.00 0.00 35.91 3.34
677 678 8.168681 TCTTGACTTTTCGACAAAACAAAATC 57.831 30.769 0.00 0.00 0.00 2.17
678 679 8.527567 TTCTTGACTTTTCGACAAAACAAAAT 57.472 26.923 0.00 0.00 0.00 1.82
679 680 7.932120 TTCTTGACTTTTCGACAAAACAAAA 57.068 28.000 0.00 0.00 0.00 2.44
680 681 7.863375 TCTTTCTTGACTTTTCGACAAAACAAA 59.137 29.630 0.00 0.00 0.00 2.83
681 682 7.325097 GTCTTTCTTGACTTTTCGACAAAACAA 59.675 33.333 0.00 0.00 34.39 2.83
682 683 6.799925 GTCTTTCTTGACTTTTCGACAAAACA 59.200 34.615 0.00 0.00 34.39 2.83
683 684 6.250739 GGTCTTTCTTGACTTTTCGACAAAAC 59.749 38.462 0.00 0.00 37.16 2.43
684 685 6.319399 GGTCTTTCTTGACTTTTCGACAAAA 58.681 36.000 0.00 0.00 37.16 2.44
685 686 5.446741 CGGTCTTTCTTGACTTTTCGACAAA 60.447 40.000 0.00 0.00 37.16 2.83
686 687 4.033587 CGGTCTTTCTTGACTTTTCGACAA 59.966 41.667 0.00 0.00 37.16 3.18
687 688 3.554324 CGGTCTTTCTTGACTTTTCGACA 59.446 43.478 0.00 0.00 37.16 4.35
688 689 3.800506 TCGGTCTTTCTTGACTTTTCGAC 59.199 43.478 0.00 0.00 37.16 4.20
689 690 4.049546 TCGGTCTTTCTTGACTTTTCGA 57.950 40.909 0.00 0.00 37.16 3.71
690 691 4.789095 TTCGGTCTTTCTTGACTTTTCG 57.211 40.909 0.00 0.00 37.16 3.46
691 692 5.455849 GCTTTTCGGTCTTTCTTGACTTTTC 59.544 40.000 0.00 0.00 37.16 2.29
692 693 5.340803 GCTTTTCGGTCTTTCTTGACTTTT 58.659 37.500 0.00 0.00 37.16 2.27
693 694 4.202020 GGCTTTTCGGTCTTTCTTGACTTT 60.202 41.667 0.00 0.00 37.16 2.66
694 695 3.315470 GGCTTTTCGGTCTTTCTTGACTT 59.685 43.478 0.00 0.00 37.16 3.01
695 696 2.879026 GGCTTTTCGGTCTTTCTTGACT 59.121 45.455 0.00 0.00 37.16 3.41
696 697 2.616842 TGGCTTTTCGGTCTTTCTTGAC 59.383 45.455 0.00 0.00 36.31 3.18
697 698 2.925724 TGGCTTTTCGGTCTTTCTTGA 58.074 42.857 0.00 0.00 0.00 3.02
698 699 3.708563 TTGGCTTTTCGGTCTTTCTTG 57.291 42.857 0.00 0.00 0.00 3.02
699 700 4.729227 TTTTGGCTTTTCGGTCTTTCTT 57.271 36.364 0.00 0.00 0.00 2.52
700 701 4.081917 TGTTTTTGGCTTTTCGGTCTTTCT 60.082 37.500 0.00 0.00 0.00 2.52
701 702 4.177783 TGTTTTTGGCTTTTCGGTCTTTC 58.822 39.130 0.00 0.00 0.00 2.62
702 703 4.195225 TGTTTTTGGCTTTTCGGTCTTT 57.805 36.364 0.00 0.00 0.00 2.52
703 704 3.878160 TGTTTTTGGCTTTTCGGTCTT 57.122 38.095 0.00 0.00 0.00 3.01
704 705 3.056465 TGTTGTTTTTGGCTTTTCGGTCT 60.056 39.130 0.00 0.00 0.00 3.85
705 706 3.254892 TGTTGTTTTTGGCTTTTCGGTC 58.745 40.909 0.00 0.00 0.00 4.79
706 707 3.320673 TGTTGTTTTTGGCTTTTCGGT 57.679 38.095 0.00 0.00 0.00 4.69
707 708 4.670227 TTTGTTGTTTTTGGCTTTTCGG 57.330 36.364 0.00 0.00 0.00 4.30
733 734 9.590451 CACATGTTTATGGCTTTTTAGATGATT 57.410 29.630 0.00 0.00 38.66 2.57
734 735 7.707893 GCACATGTTTATGGCTTTTTAGATGAT 59.292 33.333 0.00 0.00 38.66 2.45
735 736 7.035004 GCACATGTTTATGGCTTTTTAGATGA 58.965 34.615 0.00 0.00 38.66 2.92
736 737 6.020440 CGCACATGTTTATGGCTTTTTAGATG 60.020 38.462 0.00 0.00 38.66 2.90
737 738 6.035843 CGCACATGTTTATGGCTTTTTAGAT 58.964 36.000 0.00 0.00 38.66 1.98
738 739 5.398169 CGCACATGTTTATGGCTTTTTAGA 58.602 37.500 0.00 0.00 38.66 2.10
739 740 4.562394 CCGCACATGTTTATGGCTTTTTAG 59.438 41.667 0.00 0.00 38.66 1.85
740 741 4.218635 TCCGCACATGTTTATGGCTTTTTA 59.781 37.500 0.00 0.00 38.66 1.52
741 742 3.006323 TCCGCACATGTTTATGGCTTTTT 59.994 39.130 0.00 0.00 38.66 1.94
742 743 2.560542 TCCGCACATGTTTATGGCTTTT 59.439 40.909 0.00 0.00 38.66 2.27
743 744 2.166829 TCCGCACATGTTTATGGCTTT 58.833 42.857 0.00 0.00 38.66 3.51
744 745 1.832883 TCCGCACATGTTTATGGCTT 58.167 45.000 0.00 0.00 38.66 4.35
745 746 1.832883 TTCCGCACATGTTTATGGCT 58.167 45.000 0.00 0.00 38.66 4.75
746 747 2.645730 TTTCCGCACATGTTTATGGC 57.354 45.000 0.00 0.00 38.66 4.40
747 748 6.559810 TCTATTTTTCCGCACATGTTTATGG 58.440 36.000 0.00 0.00 38.66 2.74
748 749 8.459521 TTTCTATTTTTCCGCACATGTTTATG 57.540 30.769 0.00 0.00 40.24 1.90
749 750 9.482627 TTTTTCTATTTTTCCGCACATGTTTAT 57.517 25.926 0.00 0.00 0.00 1.40
750 751 8.873215 TTTTTCTATTTTTCCGCACATGTTTA 57.127 26.923 0.00 0.00 0.00 2.01
751 752 7.778470 TTTTTCTATTTTTCCGCACATGTTT 57.222 28.000 0.00 0.00 0.00 2.83
774 775 2.752903 CAGCACGTAGGGCCTTATTTTT 59.247 45.455 13.45 0.00 0.00 1.94
775 776 2.290705 ACAGCACGTAGGGCCTTATTTT 60.291 45.455 13.45 0.00 0.00 1.82
776 777 1.280998 ACAGCACGTAGGGCCTTATTT 59.719 47.619 13.45 0.00 0.00 1.40
777 778 0.909623 ACAGCACGTAGGGCCTTATT 59.090 50.000 13.45 0.00 0.00 1.40
778 779 0.178068 CACAGCACGTAGGGCCTTAT 59.822 55.000 13.45 0.00 0.00 1.73
779 780 1.594833 CACAGCACGTAGGGCCTTA 59.405 57.895 13.45 0.00 0.00 2.69
974 1017 0.744771 GAAGTGCCGATCTGGGGTTC 60.745 60.000 5.87 0.00 38.63 3.62
998 1042 1.602237 GGGCCGGAGAACTTCATCA 59.398 57.895 5.05 0.00 0.00 3.07
1047 1091 2.683933 ACGGAGGAGGGATTGCGT 60.684 61.111 0.00 0.00 0.00 5.24
1112 1156 1.076632 GAGAGGAAGGCGAGGAGGA 60.077 63.158 0.00 0.00 0.00 3.71
1175 1219 1.069513 CGGGATTTAGGCGTGGTGATA 59.930 52.381 0.00 0.00 0.00 2.15
1195 1239 0.857287 ACGCGAAGAAAGAAACCGAC 59.143 50.000 15.93 0.00 0.00 4.79
1200 1244 0.782384 GAGCGACGCGAAGAAAGAAA 59.218 50.000 15.93 0.00 0.00 2.52
1201 1245 1.334992 CGAGCGACGCGAAGAAAGAA 61.335 55.000 15.93 0.00 34.51 2.52
1202 1246 1.796355 CGAGCGACGCGAAGAAAGA 60.796 57.895 15.93 0.00 34.51 2.52
1203 1247 2.683965 CGAGCGACGCGAAGAAAG 59.316 61.111 15.93 0.00 34.51 2.62
1204 1248 2.803670 CCGAGCGACGCGAAGAAA 60.804 61.111 15.93 0.00 41.07 2.52
1220 1264 2.098770 GTGCAAAGGATTGATCTCAGCC 59.901 50.000 0.00 0.00 38.94 4.85
1248 1297 0.251033 TGCAGCAGCCTGAATCAAGT 60.251 50.000 0.00 0.00 41.77 3.16
1265 1314 1.733399 GAACACGGTCGTCTCCTGC 60.733 63.158 0.00 0.00 0.00 4.85
1394 1443 1.356124 TGAAGCTGAAGAGGAGCCTT 58.644 50.000 0.00 0.00 37.12 4.35
1500 1549 0.107800 GAGGGGGCGTTAGGAAACTC 60.108 60.000 0.00 0.00 43.67 3.01
1504 1554 3.078836 CGGAGGGGGCGTTAGGAA 61.079 66.667 0.00 0.00 0.00 3.36
1700 1753 4.162690 AGTCGATGGCGGCCCTTC 62.163 66.667 17.97 12.51 44.82 3.46
1873 1927 9.968870 CTGGGATTCAGATTTAAGTACTACTAC 57.031 37.037 0.00 0.00 46.18 2.73
1931 1986 3.988517 GGTACAGTAAGTCAGAACAGTGC 59.011 47.826 0.00 0.00 0.00 4.40
1947 2002 4.957296 AGAGGTTACAACACAAGGTACAG 58.043 43.478 0.00 0.00 0.00 2.74
1960 2015 4.851843 TCCGATGAGAACTAGAGGTTACA 58.148 43.478 0.00 0.00 38.41 2.41
1961 2016 4.276431 CCTCCGATGAGAACTAGAGGTTAC 59.724 50.000 0.00 0.00 41.42 2.50
1965 2021 1.611491 GCCTCCGATGAGAACTAGAGG 59.389 57.143 0.00 0.00 41.42 3.69
1992 2048 2.355209 GCAATTCGTCCTCCTTCCTTCT 60.355 50.000 0.00 0.00 0.00 2.85
2057 2113 6.068461 AGACATGAGAACCAGAGAGTAGTA 57.932 41.667 0.00 0.00 0.00 1.82
2058 2114 4.929479 AGACATGAGAACCAGAGAGTAGT 58.071 43.478 0.00 0.00 0.00 2.73
2059 2115 5.066375 CAGAGACATGAGAACCAGAGAGTAG 59.934 48.000 0.00 0.00 0.00 2.57
2066 2122 3.692257 AACCAGAGACATGAGAACCAG 57.308 47.619 0.00 0.00 0.00 4.00
2070 2126 6.826668 TGTTTAGAAACCAGAGACATGAGAA 58.173 36.000 0.00 0.00 38.11 2.87
2093 2149 3.881937 TGAGTCATGAGTGTCTGGATG 57.118 47.619 8.05 0.00 0.00 3.51
2094 2150 3.431905 GCATGAGTCATGAGTGTCTGGAT 60.432 47.826 32.61 0.00 43.81 3.41
2095 2151 2.093816 GCATGAGTCATGAGTGTCTGGA 60.094 50.000 32.61 0.00 43.81 3.86
2096 2152 2.277969 GCATGAGTCATGAGTGTCTGG 58.722 52.381 32.61 7.08 43.81 3.86
2101 2157 3.730963 GCACATTGCATGAGTCATGAGTG 60.731 47.826 32.61 28.99 43.81 3.51
2102 2158 2.422479 GCACATTGCATGAGTCATGAGT 59.578 45.455 32.61 21.29 43.81 3.41
2133 2189 2.752358 CAGCAGGCTGGAACTGGA 59.248 61.111 17.64 0.00 40.17 3.86
2134 2190 3.060615 GCAGCAGGCTGGAACTGG 61.061 66.667 21.63 1.88 43.77 4.00
2172 2228 5.131142 ACAATATACCTGAAGAAGTCCCCAG 59.869 44.000 0.00 0.00 0.00 4.45
2173 2229 5.036916 ACAATATACCTGAAGAAGTCCCCA 58.963 41.667 0.00 0.00 0.00 4.96
2174 2230 5.632034 ACAATATACCTGAAGAAGTCCCC 57.368 43.478 0.00 0.00 0.00 4.81
2175 2231 5.823045 CCAACAATATACCTGAAGAAGTCCC 59.177 44.000 0.00 0.00 0.00 4.46
2176 2232 6.650120 TCCAACAATATACCTGAAGAAGTCC 58.350 40.000 0.00 0.00 0.00 3.85
2179 2235 7.933577 TGCTATCCAACAATATACCTGAAGAAG 59.066 37.037 0.00 0.00 0.00 2.85
2185 2241 9.896645 ATAAGATGCTATCCAACAATATACCTG 57.103 33.333 0.00 0.00 0.00 4.00
2197 2253 7.565190 AAGGAAGATCATAAGATGCTATCCA 57.435 36.000 0.00 0.00 33.72 3.41
2198 2254 8.535335 TGTAAGGAAGATCATAAGATGCTATCC 58.465 37.037 0.00 0.00 33.72 2.59
2201 2257 9.935241 GAATGTAAGGAAGATCATAAGATGCTA 57.065 33.333 0.00 0.00 33.72 3.49
2202 2258 8.435187 TGAATGTAAGGAAGATCATAAGATGCT 58.565 33.333 0.00 0.00 33.72 3.79
2203 2259 8.613060 TGAATGTAAGGAAGATCATAAGATGC 57.387 34.615 0.00 0.00 33.72 3.91
2226 2282 8.777413 GCTGTTTAATCATGCAGTATAAGATGA 58.223 33.333 0.00 0.00 0.00 2.92
2227 2283 8.562052 TGCTGTTTAATCATGCAGTATAAGATG 58.438 33.333 0.00 0.00 0.00 2.90
2228 2284 8.681486 TGCTGTTTAATCATGCAGTATAAGAT 57.319 30.769 0.00 0.00 0.00 2.40
2234 2301 6.947644 ATCATGCTGTTTAATCATGCAGTA 57.052 33.333 12.79 0.00 37.93 2.74
2248 2315 4.692625 GCCTATAATCACGAATCATGCTGT 59.307 41.667 0.00 0.00 0.00 4.40
2251 2318 4.692625 AGTGCCTATAATCACGAATCATGC 59.307 41.667 0.00 0.00 38.19 4.06
2262 2329 6.296026 TGGTAAACATGGAGTGCCTATAATC 58.704 40.000 0.00 0.00 34.31 1.75
2263 2330 6.260700 TGGTAAACATGGAGTGCCTATAAT 57.739 37.500 0.00 0.00 34.31 1.28
2269 2336 0.811281 GCTGGTAAACATGGAGTGCC 59.189 55.000 0.00 0.00 0.00 5.01
2273 2340 2.002586 CTGACGCTGGTAAACATGGAG 58.997 52.381 0.00 0.00 0.00 3.86
2274 2341 1.338674 CCTGACGCTGGTAAACATGGA 60.339 52.381 0.00 0.00 0.00 3.41
2275 2342 1.086696 CCTGACGCTGGTAAACATGG 58.913 55.000 0.00 0.00 0.00 3.66
2276 2343 1.086696 CCCTGACGCTGGTAAACATG 58.913 55.000 0.00 0.00 0.00 3.21
2277 2344 0.690762 ACCCTGACGCTGGTAAACAT 59.309 50.000 0.00 0.00 31.61 2.71
2278 2345 0.470766 AACCCTGACGCTGGTAAACA 59.529 50.000 0.00 0.00 33.52 2.83
2279 2346 2.460757 TAACCCTGACGCTGGTAAAC 57.539 50.000 0.00 0.00 33.52 2.01
2280 2347 2.568062 TGATAACCCTGACGCTGGTAAA 59.432 45.455 0.00 0.00 33.52 2.01
2281 2348 2.181125 TGATAACCCTGACGCTGGTAA 58.819 47.619 0.00 0.00 33.52 2.85
2282 2349 1.855295 TGATAACCCTGACGCTGGTA 58.145 50.000 0.00 0.00 33.52 3.25
2283 2350 1.134401 CATGATAACCCTGACGCTGGT 60.134 52.381 0.00 0.00 36.06 4.00
2284 2351 1.586422 CATGATAACCCTGACGCTGG 58.414 55.000 0.00 0.00 0.00 4.85
2288 2355 1.942657 CCTTGCATGATAACCCTGACG 59.057 52.381 0.00 0.00 0.00 4.35
2346 2413 2.238898 AGGAAGACACGGGGGAAATTAG 59.761 50.000 0.00 0.00 0.00 1.73
2395 2462 9.061435 AGAAGAAAGAGCAATATACAAATAGCC 57.939 33.333 0.00 0.00 0.00 3.93
2408 2521 5.186021 ACGATTAGGAGAGAAGAAAGAGCAA 59.814 40.000 0.00 0.00 0.00 3.91
2413 2526 7.562454 AGTAGACGATTAGGAGAGAAGAAAG 57.438 40.000 0.00 0.00 0.00 2.62
2430 2543 5.663795 TTGCGAGGTACTATTAGTAGACG 57.336 43.478 3.75 10.50 41.55 4.18
2456 2569 6.258068 GCAGCCACTATTAGTAGACGATTTTT 59.742 38.462 0.00 0.00 0.00 1.94
2457 2570 5.753921 GCAGCCACTATTAGTAGACGATTTT 59.246 40.000 0.00 0.00 0.00 1.82
2458 2571 5.163447 TGCAGCCACTATTAGTAGACGATTT 60.163 40.000 0.00 0.00 0.00 2.17
2459 2572 4.341235 TGCAGCCACTATTAGTAGACGATT 59.659 41.667 0.00 0.00 0.00 3.34
2460 2573 3.889538 TGCAGCCACTATTAGTAGACGAT 59.110 43.478 0.00 0.00 0.00 3.73
2461 2574 3.284617 TGCAGCCACTATTAGTAGACGA 58.715 45.455 0.00 0.00 0.00 4.20
2462 2575 3.710326 TGCAGCCACTATTAGTAGACG 57.290 47.619 0.00 0.00 0.00 4.18
2463 2576 6.763610 AGAATTTGCAGCCACTATTAGTAGAC 59.236 38.462 0.00 0.00 0.00 2.59
2464 2577 6.889198 AGAATTTGCAGCCACTATTAGTAGA 58.111 36.000 0.00 0.00 0.00 2.59
2465 2578 7.559590 AAGAATTTGCAGCCACTATTAGTAG 57.440 36.000 0.00 0.00 0.00 2.57
2466 2579 7.938140 AAAGAATTTGCAGCCACTATTAGTA 57.062 32.000 0.00 0.00 36.60 1.82
2467 2580 6.840780 AAAGAATTTGCAGCCACTATTAGT 57.159 33.333 0.00 0.00 36.60 2.24
2468 2581 9.807649 ATTAAAAGAATTTGCAGCCACTATTAG 57.192 29.630 0.00 0.00 39.02 1.73
2470 2583 9.586435 GTATTAAAAGAATTTGCAGCCACTATT 57.414 29.630 0.00 0.00 39.02 1.73
2471 2584 8.197439 GGTATTAAAAGAATTTGCAGCCACTAT 58.803 33.333 0.00 0.00 39.02 2.12
2472 2585 7.363443 GGGTATTAAAAGAATTTGCAGCCACTA 60.363 37.037 0.00 0.00 39.02 2.74
2473 2586 6.398095 GGTATTAAAAGAATTTGCAGCCACT 58.602 36.000 0.00 0.00 39.02 4.00
2474 2587 5.580691 GGGTATTAAAAGAATTTGCAGCCAC 59.419 40.000 0.00 0.00 39.02 5.01
2475 2588 5.247110 TGGGTATTAAAAGAATTTGCAGCCA 59.753 36.000 0.00 0.00 39.02 4.75
2511 2624 2.620112 CCGGCACAGACCAGCTTTG 61.620 63.158 0.00 0.00 0.00 2.77
2528 2641 3.524648 TTGAACGACCCGGCAGTCC 62.525 63.158 0.00 0.00 32.91 3.85
2529 2642 2.027625 CTTGAACGACCCGGCAGTC 61.028 63.158 0.00 0.00 0.00 3.51
2530 2643 1.827399 ATCTTGAACGACCCGGCAGT 61.827 55.000 0.00 0.00 0.00 4.40
2531 2644 1.079127 ATCTTGAACGACCCGGCAG 60.079 57.895 0.00 0.00 0.00 4.85
2532 2645 1.375396 CATCTTGAACGACCCGGCA 60.375 57.895 0.00 0.00 0.00 5.69
2533 2646 2.106683 CCATCTTGAACGACCCGGC 61.107 63.158 0.00 0.00 0.00 6.13
2540 2653 1.755179 AAGGATGCCCATCTTGAACG 58.245 50.000 8.06 0.00 37.92 3.95
2565 2678 4.460382 ACAGTTACCTTCATTGCAGGAATG 59.540 41.667 9.47 8.33 42.68 2.67
2585 2698 6.018098 TGGAGCAAAAATAAACAAATGCACAG 60.018 34.615 0.00 0.00 36.30 3.66
2595 2708 9.076596 GTGTGATATCTTGGAGCAAAAATAAAC 57.923 33.333 3.98 0.00 0.00 2.01
2628 2741 4.580580 GTCAGTCCTGAACCTCATTTGTTT 59.419 41.667 0.00 0.00 41.85 2.83
2631 2744 2.738846 CGTCAGTCCTGAACCTCATTTG 59.261 50.000 0.00 0.00 41.85 2.32
2639 2755 0.244178 GGGTCTCGTCAGTCCTGAAC 59.756 60.000 0.00 0.00 41.85 3.18
2642 2758 2.701780 CGGGGTCTCGTCAGTCCTG 61.702 68.421 0.00 0.00 0.00 3.86
2647 2763 0.460284 CCAATTCGGGGTCTCGTCAG 60.460 60.000 0.00 0.00 0.00 3.51
2648 2764 1.594833 CCAATTCGGGGTCTCGTCA 59.405 57.895 0.00 0.00 0.00 4.35
2649 2765 1.814169 GCCAATTCGGGGTCTCGTC 60.814 63.158 0.00 0.00 34.06 4.20
2650 2766 2.267961 GCCAATTCGGGGTCTCGT 59.732 61.111 0.00 0.00 34.06 4.18
2651 2767 2.513897 GGCCAATTCGGGGTCTCG 60.514 66.667 0.00 0.00 34.06 4.04
2652 2768 1.001393 TTGGCCAATTCGGGGTCTC 60.001 57.895 16.05 0.00 34.06 3.36
2654 2801 1.605165 TGTTGGCCAATTCGGGGTC 60.605 57.895 23.66 6.47 34.06 4.46
2657 2804 1.288752 GTGTGTTGGCCAATTCGGG 59.711 57.895 23.66 0.00 34.06 5.14
2660 2807 0.318120 CAGGGTGTGTTGGCCAATTC 59.682 55.000 23.66 17.58 0.00 2.17
2663 2810 2.837291 GCAGGGTGTGTTGGCCAA 60.837 61.111 16.05 16.05 0.00 4.52
2665 2812 4.912395 TGGCAGGGTGTGTTGGCC 62.912 66.667 0.00 0.00 44.82 5.36
2667 2814 2.123939 TGTGGCAGGGTGTGTTGG 60.124 61.111 0.00 0.00 0.00 3.77
2669 2816 2.519302 GCTGTGGCAGGGTGTGTT 60.519 61.111 0.00 0.00 38.54 3.32
2679 2826 1.206115 CGTTTTCGGTTTGCTGTGGC 61.206 55.000 0.00 0.00 39.94 5.01
2682 2829 0.171455 TTGCGTTTTCGGTTTGCTGT 59.829 45.000 0.00 0.00 44.29 4.40
2689 2836 1.557443 CTCTCGCTTGCGTTTTCGGT 61.557 55.000 14.70 0.00 44.29 4.69
2730 2877 2.887568 GCAGACCTCCATCACGCG 60.888 66.667 3.53 3.53 0.00 6.01
2746 2893 3.557903 TTCTGCCTGGTGGAGCTGC 62.558 63.158 0.00 0.00 34.57 5.25
2762 2909 3.179939 GAACGCCGGACTCGCTTC 61.180 66.667 5.05 2.79 34.56 3.86
2880 3030 5.835280 AGAAACTGTGGAAATCAATTCAGGT 59.165 36.000 0.00 0.00 39.98 4.00
2884 3034 6.218746 AGCAAGAAACTGTGGAAATCAATTC 58.781 36.000 0.00 0.00 37.31 2.17
2889 3039 3.737774 GCAAGCAAGAAACTGTGGAAATC 59.262 43.478 0.00 0.00 0.00 2.17
2920 3074 4.259356 TCAGAATTCAGAACCATGCAGAG 58.741 43.478 8.44 0.00 0.00 3.35
2936 3090 2.947652 CGTGCAAAGGATGGATCAGAAT 59.052 45.455 0.00 0.00 0.00 2.40
2937 3091 2.290260 ACGTGCAAAGGATGGATCAGAA 60.290 45.455 0.00 0.00 0.00 3.02
2938 3092 1.278985 ACGTGCAAAGGATGGATCAGA 59.721 47.619 0.00 0.00 0.00 3.27
2939 3093 1.742761 ACGTGCAAAGGATGGATCAG 58.257 50.000 0.00 0.00 0.00 2.90
2940 3094 3.205338 CATACGTGCAAAGGATGGATCA 58.795 45.455 0.00 0.00 0.00 2.92
2941 3095 3.206150 ACATACGTGCAAAGGATGGATC 58.794 45.455 17.05 0.00 0.00 3.36
2942 3096 3.281727 ACATACGTGCAAAGGATGGAT 57.718 42.857 17.05 0.00 0.00 3.41
2945 3099 3.303990 GGCATACATACGTGCAAAGGATG 60.304 47.826 12.62 12.62 43.00 3.51
2947 3101 2.285083 GGCATACATACGTGCAAAGGA 58.715 47.619 0.00 0.00 43.00 3.36
2960 3114 3.088532 GACAAACCTGAATGGGCATACA 58.911 45.455 0.00 0.00 41.11 2.29
3165 3319 2.358737 CAGAACTCCACACGGGGC 60.359 66.667 0.00 0.00 35.35 5.80
3166 3320 2.358737 GCAGAACTCCACACGGGG 60.359 66.667 0.00 0.00 39.55 5.73
3192 3346 2.599659 GCTGCTAAAACAATGCTCCAC 58.400 47.619 0.00 0.00 0.00 4.02
3376 3534 1.813513 CCCTGTGTTACAGCAAGAGG 58.186 55.000 3.49 0.00 44.63 3.69
3389 3547 0.679002 CAACTGATGGAGGCCCTGTG 60.679 60.000 0.00 0.00 0.00 3.66
3406 3570 4.647611 CCTTGTACCTCACATAACACCAA 58.352 43.478 0.00 0.00 36.90 3.67
3410 3574 3.868369 GCAGCCTTGTACCTCACATAACA 60.868 47.826 0.00 0.00 36.90 2.41
3411 3575 2.678336 GCAGCCTTGTACCTCACATAAC 59.322 50.000 0.00 0.00 36.90 1.89
3413 3577 1.134818 CGCAGCCTTGTACCTCACATA 60.135 52.381 0.00 0.00 36.90 2.29
3523 3687 3.943269 ACATACCAGGATCCTATGGGA 57.057 47.619 20.76 14.65 46.81 4.37
3573 3737 6.478344 GTGATGACTAGATTGATCAGGTTCAC 59.522 42.308 0.00 0.00 0.00 3.18
3580 3744 8.917088 TCAATAGTGTGATGACTAGATTGATCA 58.083 33.333 0.00 0.00 31.94 2.92
3617 3782 3.695830 TCAGTTCGGACTTATTGGCTT 57.304 42.857 0.00 0.00 32.54 4.35
3640 3813 4.917998 TGAAATATATTGCGCGTCTCTCTC 59.082 41.667 8.43 0.00 0.00 3.20
3650 3823 3.414101 CGCGTGTGTTGAAATATATTGCG 59.586 43.478 0.00 2.95 34.56 4.85
3663 3836 1.444119 AATGGAGCAACGCGTGTGTT 61.444 50.000 14.98 11.55 0.00 3.32
3672 3845 3.798337 CACACTTGTTGAAATGGAGCAAC 59.202 43.478 0.00 0.00 43.45 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.