Multiple sequence alignment - TraesCS2B01G433600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G433600 chr2B 100.000 7399 0 0 1 7399 622902985 622910383 0.000000e+00 13664.0
1 TraesCS2B01G433600 chr2B 92.354 2145 102 23 819 2957 690776672 690778760 0.000000e+00 2996.0
2 TraesCS2B01G433600 chr2B 96.360 1731 50 7 3578 5304 690779303 690781024 0.000000e+00 2835.0
3 TraesCS2B01G433600 chr2B 97.232 578 12 3 3003 3578 690778757 690779332 0.000000e+00 976.0
4 TraesCS2B01G433600 chr2B 88.148 810 49 7 6632 7396 690781209 690782016 0.000000e+00 920.0
5 TraesCS2B01G433600 chr2B 83.838 99 7 7 2927 3021 37550958 37551051 1.320000e-12 86.1
6 TraesCS2B01G433600 chr4A 96.959 6609 126 25 847 7399 701702269 701695680 0.000000e+00 11021.0
7 TraesCS2B01G433600 chr4A 98.154 1029 16 1 964 1992 571068302 571067277 0.000000e+00 1792.0
8 TraesCS2B01G433600 chr5A 97.348 3695 77 10 833 4520 544222256 544225936 0.000000e+00 6261.0
9 TraesCS2B01G433600 chr5A 96.078 3060 81 14 3578 6632 549319517 549316492 0.000000e+00 4950.0
10 TraesCS2B01G433600 chr5A 95.926 2700 59 14 4743 7399 544226352 544229043 0.000000e+00 4329.0
11 TraesCS2B01G433600 chr5A 96.478 2158 60 9 4480 6632 549298017 549295871 0.000000e+00 3550.0
12 TraesCS2B01G433600 chr5A 96.837 1486 23 10 1930 3405 549321084 549319613 0.000000e+00 2462.0
13 TraesCS2B01G433600 chr5A 94.602 1056 45 5 855 1900 549322134 549321081 0.000000e+00 1624.0
14 TraesCS2B01G433600 chr5A 89.507 791 49 11 6632 7399 549295833 549295054 0.000000e+00 970.0
15 TraesCS2B01G433600 chr5A 89.128 791 52 11 6632 7399 549316454 549315675 0.000000e+00 953.0
16 TraesCS2B01G433600 chr3B 98.333 3480 44 10 855 4328 736485132 736488603 0.000000e+00 6093.0
17 TraesCS2B01G433600 chr3B 97.092 3301 53 15 3654 6924 609330805 609327518 0.000000e+00 5524.0
18 TraesCS2B01G433600 chr3B 97.375 3010 40 9 4417 7394 736488600 736491602 0.000000e+00 5084.0
19 TraesCS2B01G433600 chr3B 98.147 1457 27 0 965 2421 609332653 609331197 0.000000e+00 2542.0
20 TraesCS2B01G433600 chr3B 98.047 973 12 5 1918 2884 609334341 609333370 0.000000e+00 1685.0
21 TraesCS2B01G433600 chr3B 98.459 714 10 1 2835 3547 609333377 609332664 0.000000e+00 1256.0
22 TraesCS2B01G433600 chr3B 93.983 349 17 2 7051 7399 609327294 609326950 6.580000e-145 525.0
23 TraesCS2B01G433600 chr3B 92.275 233 18 0 3579 3811 466386203 466385971 1.540000e-86 331.0
24 TraesCS2B01G433600 chr3B 88.060 201 17 5 7179 7378 578392204 578392398 1.610000e-56 231.0
25 TraesCS2B01G433600 chr3B 100.000 39 0 0 6919 6957 609327507 609327469 1.030000e-08 73.1
26 TraesCS2B01G433600 chr6B 97.377 3431 52 8 4000 7397 463397585 463401010 0.000000e+00 5803.0
27 TraesCS2B01G433600 chr6B 98.304 2299 33 4 964 3258 463395289 463397585 0.000000e+00 4024.0
28 TraesCS2B01G433600 chr3D 96.471 2805 65 12 3579 6377 434919410 434916634 0.000000e+00 4601.0
29 TraesCS2B01G433600 chr3D 96.053 2280 66 16 1305 3578 434921643 434919382 0.000000e+00 3690.0
30 TraesCS2B01G433600 chr3D 85.495 586 26 19 6755 7300 434916639 434916073 2.330000e-154 556.0
31 TraesCS2B01G433600 chr3D 95.333 150 7 0 913 1062 434926984 434926835 9.590000e-59 239.0
32 TraesCS2B01G433600 chr3D 95.122 41 2 0 2 42 239876863 239876903 1.720000e-06 65.8
33 TraesCS2B01G433600 chr2D 94.618 2527 69 13 4916 7399 5937025 5934523 0.000000e+00 3851.0
34 TraesCS2B01G433600 chr2D 89.542 698 39 10 67 755 526510988 526511660 0.000000e+00 854.0
35 TraesCS2B01G433600 chr2D 93.846 65 4 0 734 798 526512079 526512143 1.700000e-16 99.0
36 TraesCS2B01G433600 chrUn 97.405 1503 28 2 3019 4520 394865353 394863861 0.000000e+00 2549.0
37 TraesCS2B01G433600 chrUn 92.193 602 35 6 2984 3578 42465400 42465996 0.000000e+00 841.0
38 TraesCS2B01G433600 chrUn 89.583 432 34 7 2488 2913 42464980 42465406 8.450000e-149 538.0
39 TraesCS2B01G433600 chr4D 94.085 1623 73 14 4338 5957 215155599 215153997 0.000000e+00 2444.0
40 TraesCS2B01G433600 chr4D 85.115 524 41 8 2396 2913 81335050 81335542 1.110000e-137 501.0
41 TraesCS2B01G433600 chr4D 83.721 473 30 17 886 1314 215157784 215157315 3.210000e-108 403.0
42 TraesCS2B01G433600 chr6A 95.336 879 37 4 4338 5214 233346625 233347501 0.000000e+00 1393.0
43 TraesCS2B01G433600 chr7D 84.394 487 42 17 845 1314 473717827 473717358 1.460000e-121 448.0
44 TraesCS2B01G433600 chr7D 91.525 177 14 1 3805 3980 535549801 535549977 7.420000e-60 243.0
45 TraesCS2B01G433600 chr7D 83.505 97 6 7 2933 3025 470204878 470204788 1.710000e-11 82.4
46 TraesCS2B01G433600 chr2A 80.615 325 48 9 827 1144 507704172 507703856 3.450000e-58 237.0
47 TraesCS2B01G433600 chr2A 84.783 92 6 5 2933 3021 754348655 754348741 1.320000e-12 86.1
48 TraesCS2B01G433600 chr7A 82.353 85 15 0 189 273 180636369 180636285 2.860000e-09 75.0
49 TraesCS2B01G433600 chr7A 100.000 32 0 0 767 798 635676949 635676980 8.020000e-05 60.2
50 TraesCS2B01G433600 chr1B 86.885 61 8 0 188 248 668082506 668082446 1.330000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G433600 chr2B 622902985 622910383 7398 False 13664.000000 13664 100.000000 1 7399 1 chr2B.!!$F2 7398
1 TraesCS2B01G433600 chr2B 690776672 690782016 5344 False 1931.750000 2996 93.523500 819 7396 4 chr2B.!!$F3 6577
2 TraesCS2B01G433600 chr4A 701695680 701702269 6589 True 11021.000000 11021 96.959000 847 7399 1 chr4A.!!$R2 6552
3 TraesCS2B01G433600 chr4A 571067277 571068302 1025 True 1792.000000 1792 98.154000 964 1992 1 chr4A.!!$R1 1028
4 TraesCS2B01G433600 chr5A 544222256 544229043 6787 False 5295.000000 6261 96.637000 833 7399 2 chr5A.!!$F1 6566
5 TraesCS2B01G433600 chr5A 549315675 549322134 6459 True 2497.250000 4950 94.161250 855 7399 4 chr5A.!!$R2 6544
6 TraesCS2B01G433600 chr5A 549295054 549298017 2963 True 2260.000000 3550 92.992500 4480 7399 2 chr5A.!!$R1 2919
7 TraesCS2B01G433600 chr3B 736485132 736491602 6470 False 5588.500000 6093 97.854000 855 7394 2 chr3B.!!$F2 6539
8 TraesCS2B01G433600 chr3B 609326950 609334341 7391 True 1934.183333 5524 97.621333 965 7399 6 chr3B.!!$R2 6434
9 TraesCS2B01G433600 chr6B 463395289 463401010 5721 False 4913.500000 5803 97.840500 964 7397 2 chr6B.!!$F1 6433
10 TraesCS2B01G433600 chr3D 434916073 434921643 5570 True 2949.000000 4601 92.673000 1305 7300 3 chr3D.!!$R2 5995
11 TraesCS2B01G433600 chr2D 5934523 5937025 2502 True 3851.000000 3851 94.618000 4916 7399 1 chr2D.!!$R1 2483
12 TraesCS2B01G433600 chr2D 526510988 526512143 1155 False 476.500000 854 91.694000 67 798 2 chr2D.!!$F1 731
13 TraesCS2B01G433600 chrUn 394863861 394865353 1492 True 2549.000000 2549 97.405000 3019 4520 1 chrUn.!!$R1 1501
14 TraesCS2B01G433600 chrUn 42464980 42465996 1016 False 689.500000 841 90.888000 2488 3578 2 chrUn.!!$F1 1090
15 TraesCS2B01G433600 chr4D 215153997 215157784 3787 True 1423.500000 2444 88.903000 886 5957 2 chr4D.!!$R1 5071
16 TraesCS2B01G433600 chr6A 233346625 233347501 876 False 1393.000000 1393 95.336000 4338 5214 1 chr6A.!!$F1 876

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
380 381 0.038166 TGGCCTGCTTAGTTTGGAGG 59.962 55.0 3.32 0.0 44.43 4.30 F
648 649 0.109504 GTTGTTGTGTGGTGTTGCGT 60.110 50.0 0.00 0.0 0.00 5.24 F
669 670 0.110486 ACGGTTTTGGAGTCATGGCT 59.890 50.0 0.00 0.0 0.00 4.75 F
771 772 0.462225 TTGAGCGTTTTGACGGGACA 60.462 50.0 0.93 0.0 0.00 4.02 F
1303 1357 0.635009 TCCACCTCCTCTACCCGATT 59.365 55.0 0.00 0.0 0.00 3.34 F
2163 2245 2.677902 GCAGACCAAGTCCATTGATCGA 60.678 50.0 0.00 0.0 41.83 3.59 F
3812 5856 1.149101 AGCATCCCCATATTTCCCGT 58.851 50.0 0.00 0.0 0.00 5.28 F
4239 6520 0.976641 TCTGATGTTGCCCTCGACTT 59.023 50.0 0.00 0.0 0.00 3.01 F
4461 6743 2.169769 CACGATTAGGCTTCCAAGGGTA 59.830 50.0 0.00 0.0 0.00 3.69 F
6145 8638 3.000727 CCATCACCAAGGAAGTACGTTC 58.999 50.0 0.00 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1751 1809 2.039084 CCATGGCCAAGACTATACTCCC 59.961 54.545 10.96 0.00 0.00 4.30 R
1914 1996 3.000819 TCCACCGGCACCTTCGAT 61.001 61.111 0.00 0.00 0.00 3.59 R
2163 2245 5.182001 CCTCTTCCTTCGTTGTTGAATCAAT 59.818 40.000 0.00 0.00 0.00 2.57 R
2357 2443 7.277539 GCAGGACTATGACTTTGCATATCTATC 59.722 40.741 0.00 0.00 30.90 2.08 R
3164 3360 1.545582 CCCAAACATTTGCTCGGTGAT 59.454 47.619 0.00 0.00 36.86 3.06 R
4138 6419 0.321475 GAAGAAGAGCAGCAGCCAGT 60.321 55.000 0.00 0.00 43.56 4.00 R
5666 8156 3.210227 TCTGAGGCGATGTCAAAAACAA 58.790 40.909 0.00 0.00 42.37 2.83 R
6145 8638 3.254166 CCTCTTTGGAGTCCACAATTGTG 59.746 47.826 28.18 28.18 40.38 3.33 R
6310 8803 5.406649 GTGATGTCACAAAAAGGTTGTTCA 58.593 37.500 8.22 0.00 45.75 3.18 R
7314 10182 1.764054 CTTCCCCCTCCATCTCGCT 60.764 63.158 0.00 0.00 0.00 4.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.663636 ATTTGAGACGAAACGACATTCC 57.336 40.909 0.00 0.00 0.00 3.01
24 25 2.804697 TGAGACGAAACGACATTCCA 57.195 45.000 0.00 0.00 0.00 3.53
25 26 3.100658 TGAGACGAAACGACATTCCAA 57.899 42.857 0.00 0.00 0.00 3.53
26 27 3.459145 TGAGACGAAACGACATTCCAAA 58.541 40.909 0.00 0.00 0.00 3.28
27 28 3.246699 TGAGACGAAACGACATTCCAAAC 59.753 43.478 0.00 0.00 0.00 2.93
28 29 3.199677 AGACGAAACGACATTCCAAACA 58.800 40.909 0.00 0.00 0.00 2.83
29 30 3.623960 AGACGAAACGACATTCCAAACAA 59.376 39.130 0.00 0.00 0.00 2.83
30 31 3.947626 ACGAAACGACATTCCAAACAAG 58.052 40.909 0.00 0.00 0.00 3.16
31 32 3.242936 ACGAAACGACATTCCAAACAAGG 60.243 43.478 0.00 0.00 0.00 3.61
32 33 2.793278 AACGACATTCCAAACAAGGC 57.207 45.000 0.00 0.00 0.00 4.35
33 34 0.958822 ACGACATTCCAAACAAGGCC 59.041 50.000 0.00 0.00 0.00 5.19
34 35 1.247567 CGACATTCCAAACAAGGCCT 58.752 50.000 0.00 0.00 0.00 5.19
35 36 1.613437 CGACATTCCAAACAAGGCCTT 59.387 47.619 13.78 13.78 0.00 4.35
36 37 2.817258 CGACATTCCAAACAAGGCCTTA 59.183 45.455 20.00 0.00 0.00 2.69
37 38 3.365969 CGACATTCCAAACAAGGCCTTAC 60.366 47.826 20.00 0.00 0.00 2.34
38 39 2.556622 ACATTCCAAACAAGGCCTTACG 59.443 45.455 20.00 9.74 0.00 3.18
39 40 2.642154 TTCCAAACAAGGCCTTACGA 57.358 45.000 20.00 6.37 0.00 3.43
40 41 2.178912 TCCAAACAAGGCCTTACGAG 57.821 50.000 20.00 8.49 0.00 4.18
41 42 1.418637 TCCAAACAAGGCCTTACGAGT 59.581 47.619 20.00 9.25 0.00 4.18
42 43 1.535462 CCAAACAAGGCCTTACGAGTG 59.465 52.381 20.00 8.16 0.00 3.51
43 44 2.218603 CAAACAAGGCCTTACGAGTGT 58.781 47.619 20.00 8.93 0.00 3.55
44 45 2.165319 AACAAGGCCTTACGAGTGTC 57.835 50.000 20.00 0.00 0.00 3.67
45 46 1.045407 ACAAGGCCTTACGAGTGTCA 58.955 50.000 20.00 0.00 0.00 3.58
46 47 1.414919 ACAAGGCCTTACGAGTGTCAA 59.585 47.619 20.00 0.00 0.00 3.18
47 48 2.038557 ACAAGGCCTTACGAGTGTCAAT 59.961 45.455 20.00 0.00 0.00 2.57
48 49 3.074412 CAAGGCCTTACGAGTGTCAATT 58.926 45.455 20.00 0.00 0.00 2.32
49 50 3.418684 AGGCCTTACGAGTGTCAATTT 57.581 42.857 0.00 0.00 0.00 1.82
50 51 3.751518 AGGCCTTACGAGTGTCAATTTT 58.248 40.909 0.00 0.00 0.00 1.82
51 52 3.751698 AGGCCTTACGAGTGTCAATTTTC 59.248 43.478 0.00 0.00 0.00 2.29
52 53 3.119955 GGCCTTACGAGTGTCAATTTTCC 60.120 47.826 0.00 0.00 0.00 3.13
53 54 3.500680 GCCTTACGAGTGTCAATTTTCCA 59.499 43.478 0.00 0.00 0.00 3.53
54 55 4.156008 GCCTTACGAGTGTCAATTTTCCAT 59.844 41.667 0.00 0.00 0.00 3.41
55 56 5.631026 CCTTACGAGTGTCAATTTTCCATG 58.369 41.667 0.00 0.00 0.00 3.66
56 57 5.181245 CCTTACGAGTGTCAATTTTCCATGT 59.819 40.000 0.00 0.00 0.00 3.21
57 58 4.749245 ACGAGTGTCAATTTTCCATGTC 57.251 40.909 0.00 0.00 0.00 3.06
58 59 3.502211 ACGAGTGTCAATTTTCCATGTCC 59.498 43.478 0.00 0.00 0.00 4.02
59 60 3.501828 CGAGTGTCAATTTTCCATGTCCA 59.498 43.478 0.00 0.00 0.00 4.02
60 61 4.613622 CGAGTGTCAATTTTCCATGTCCAC 60.614 45.833 0.00 0.00 0.00 4.02
61 62 4.214310 AGTGTCAATTTTCCATGTCCACA 58.786 39.130 0.00 0.00 0.00 4.17
62 63 4.834496 AGTGTCAATTTTCCATGTCCACAT 59.166 37.500 0.00 0.00 36.96 3.21
63 64 5.047802 AGTGTCAATTTTCCATGTCCACATC 60.048 40.000 0.00 0.00 33.61 3.06
64 65 4.082841 TGTCAATTTTCCATGTCCACATCG 60.083 41.667 0.00 0.00 33.61 3.84
65 66 4.078537 TCAATTTTCCATGTCCACATCGT 58.921 39.130 0.00 0.00 33.61 3.73
78 79 3.689161 TCCACATCGTGATTTAAGCCAAG 59.311 43.478 0.00 0.00 35.23 3.61
82 83 2.343101 TCGTGATTTAAGCCAAGGTCG 58.657 47.619 0.00 0.00 0.00 4.79
132 133 3.294214 TGTCCGTATCTTCCTAGTTCCC 58.706 50.000 0.00 0.00 0.00 3.97
136 137 4.587684 TCCGTATCTTCCTAGTTCCCATTC 59.412 45.833 0.00 0.00 0.00 2.67
146 147 3.797671 AGTTCCCATTCCTAGTAGGGT 57.202 47.619 16.44 2.88 42.12 4.34
147 148 3.385115 AGTTCCCATTCCTAGTAGGGTG 58.615 50.000 16.44 14.34 42.12 4.61
148 149 3.113043 GTTCCCATTCCTAGTAGGGTGT 58.887 50.000 16.44 0.00 42.12 4.16
149 150 3.502051 TCCCATTCCTAGTAGGGTGTT 57.498 47.619 16.44 0.00 42.12 3.32
150 151 4.630382 TCCCATTCCTAGTAGGGTGTTA 57.370 45.455 16.44 3.81 42.12 2.41
151 152 4.553678 TCCCATTCCTAGTAGGGTGTTAG 58.446 47.826 16.44 7.08 42.12 2.34
152 153 4.015918 TCCCATTCCTAGTAGGGTGTTAGT 60.016 45.833 16.44 0.00 42.12 2.24
153 154 5.196369 TCCCATTCCTAGTAGGGTGTTAGTA 59.804 44.000 16.44 0.00 42.12 1.82
154 155 5.539193 CCCATTCCTAGTAGGGTGTTAGTAG 59.461 48.000 16.44 2.78 35.59 2.57
155 156 5.539193 CCATTCCTAGTAGGGTGTTAGTAGG 59.461 48.000 16.44 7.36 43.59 3.18
156 157 4.803329 TCCTAGTAGGGTGTTAGTAGGG 57.197 50.000 16.44 0.00 42.93 3.53
159 160 3.111741 AGTAGGGTGTTAGTAGGGTGG 57.888 52.381 0.00 0.00 0.00 4.61
169 170 0.043788 AGTAGGGTGGGGTTAGGTCC 59.956 60.000 0.00 0.00 0.00 4.46
177 178 1.456331 GGGTTAGGTCCCCGATCGA 60.456 63.158 18.66 0.00 41.54 3.59
212 213 5.712152 AAGAAAATTTTGCACGGATCTCT 57.288 34.783 8.47 0.00 0.00 3.10
216 217 6.375455 AGAAAATTTTGCACGGATCTCTATGT 59.625 34.615 8.47 0.00 0.00 2.29
222 223 8.534333 TTTTGCACGGATCTCTATGTAATATC 57.466 34.615 0.00 0.00 0.00 1.63
263 264 2.726832 AGACGTAACCAAGTCTCAGC 57.273 50.000 0.00 0.00 43.52 4.26
265 266 1.272769 GACGTAACCAAGTCTCAGCCT 59.727 52.381 0.00 0.00 34.74 4.58
268 269 2.492484 CGTAACCAAGTCTCAGCCTACT 59.508 50.000 0.00 0.00 0.00 2.57
269 270 3.673594 CGTAACCAAGTCTCAGCCTACTG 60.674 52.174 0.00 0.00 45.95 2.74
281 282 3.459710 AGCCTACTGAGACTTGGTACT 57.540 47.619 0.00 0.00 0.00 2.73
304 305 6.876257 ACTGAGACTTAGCAAAACTATTCCTG 59.124 38.462 0.00 0.00 0.00 3.86
333 334 5.121811 ACTATAGTAGACACGTCGACCAAT 58.878 41.667 10.58 0.00 36.12 3.16
334 335 4.978083 ATAGTAGACACGTCGACCAATT 57.022 40.909 10.58 0.00 36.12 2.32
335 336 3.213249 AGTAGACACGTCGACCAATTC 57.787 47.619 10.58 1.51 36.12 2.17
336 337 2.094854 AGTAGACACGTCGACCAATTCC 60.095 50.000 10.58 0.00 36.12 3.01
337 338 0.966920 AGACACGTCGACCAATTCCT 59.033 50.000 10.58 0.00 34.09 3.36
338 339 1.343465 AGACACGTCGACCAATTCCTT 59.657 47.619 10.58 0.00 34.09 3.36
339 340 1.725164 GACACGTCGACCAATTCCTTC 59.275 52.381 10.58 0.00 0.00 3.46
340 341 1.343465 ACACGTCGACCAATTCCTTCT 59.657 47.619 10.58 0.00 0.00 2.85
341 342 2.224209 ACACGTCGACCAATTCCTTCTT 60.224 45.455 10.58 0.00 0.00 2.52
342 343 2.412089 CACGTCGACCAATTCCTTCTTC 59.588 50.000 10.58 0.00 0.00 2.87
343 344 2.299297 ACGTCGACCAATTCCTTCTTCT 59.701 45.455 10.58 0.00 0.00 2.85
344 345 3.244112 ACGTCGACCAATTCCTTCTTCTT 60.244 43.478 10.58 0.00 0.00 2.52
345 346 3.746492 CGTCGACCAATTCCTTCTTCTTT 59.254 43.478 10.58 0.00 0.00 2.52
346 347 4.213482 CGTCGACCAATTCCTTCTTCTTTT 59.787 41.667 10.58 0.00 0.00 2.27
347 348 5.452777 GTCGACCAATTCCTTCTTCTTTTG 58.547 41.667 3.51 0.00 0.00 2.44
348 349 4.023193 TCGACCAATTCCTTCTTCTTTTGC 60.023 41.667 0.00 0.00 0.00 3.68
349 350 4.261572 CGACCAATTCCTTCTTCTTTTGCA 60.262 41.667 0.00 0.00 0.00 4.08
350 351 4.948847 ACCAATTCCTTCTTCTTTTGCAC 58.051 39.130 0.00 0.00 0.00 4.57
351 352 4.651045 ACCAATTCCTTCTTCTTTTGCACT 59.349 37.500 0.00 0.00 0.00 4.40
352 353 4.986659 CCAATTCCTTCTTCTTTTGCACTG 59.013 41.667 0.00 0.00 0.00 3.66
353 354 5.452356 CCAATTCCTTCTTCTTTTGCACTGT 60.452 40.000 0.00 0.00 0.00 3.55
354 355 6.239008 CCAATTCCTTCTTCTTTTGCACTGTA 60.239 38.462 0.00 0.00 0.00 2.74
355 356 7.373493 CAATTCCTTCTTCTTTTGCACTGTAT 58.627 34.615 0.00 0.00 0.00 2.29
356 357 6.560253 TTCCTTCTTCTTTTGCACTGTATC 57.440 37.500 0.00 0.00 0.00 2.24
357 358 5.869579 TCCTTCTTCTTTTGCACTGTATCT 58.130 37.500 0.00 0.00 0.00 1.98
358 359 7.004555 TCCTTCTTCTTTTGCACTGTATCTA 57.995 36.000 0.00 0.00 0.00 1.98
359 360 7.624549 TCCTTCTTCTTTTGCACTGTATCTAT 58.375 34.615 0.00 0.00 0.00 1.98
360 361 8.758829 TCCTTCTTCTTTTGCACTGTATCTATA 58.241 33.333 0.00 0.00 0.00 1.31
361 362 9.553064 CCTTCTTCTTTTGCACTGTATCTATAT 57.447 33.333 0.00 0.00 0.00 0.86
363 364 8.893219 TCTTCTTTTGCACTGTATCTATATGG 57.107 34.615 0.00 0.00 0.00 2.74
364 365 7.442364 TCTTCTTTTGCACTGTATCTATATGGC 59.558 37.037 0.00 0.00 0.00 4.40
365 366 5.997746 TCTTTTGCACTGTATCTATATGGCC 59.002 40.000 0.00 0.00 0.00 5.36
366 367 5.567037 TTTGCACTGTATCTATATGGCCT 57.433 39.130 3.32 0.00 0.00 5.19
367 368 4.541973 TGCACTGTATCTATATGGCCTG 57.458 45.455 3.32 0.00 0.00 4.85
368 369 3.265791 GCACTGTATCTATATGGCCTGC 58.734 50.000 3.32 0.00 0.00 4.85
369 370 3.055530 GCACTGTATCTATATGGCCTGCT 60.056 47.826 3.32 0.00 0.00 4.24
370 371 4.564406 GCACTGTATCTATATGGCCTGCTT 60.564 45.833 3.32 0.00 0.00 3.91
371 372 5.337571 GCACTGTATCTATATGGCCTGCTTA 60.338 44.000 3.32 0.00 0.00 3.09
372 373 6.336566 CACTGTATCTATATGGCCTGCTTAG 58.663 44.000 3.32 0.14 0.00 2.18
373 374 6.019748 ACTGTATCTATATGGCCTGCTTAGT 58.980 40.000 3.32 0.00 0.00 2.24
374 375 6.498651 ACTGTATCTATATGGCCTGCTTAGTT 59.501 38.462 3.32 0.00 0.00 2.24
375 376 7.016661 ACTGTATCTATATGGCCTGCTTAGTTT 59.983 37.037 3.32 0.00 0.00 2.66
376 377 7.161404 TGTATCTATATGGCCTGCTTAGTTTG 58.839 38.462 3.32 0.00 0.00 2.93
377 378 4.973168 TCTATATGGCCTGCTTAGTTTGG 58.027 43.478 3.32 0.00 0.00 3.28
378 379 3.951563 ATATGGCCTGCTTAGTTTGGA 57.048 42.857 3.32 0.00 0.00 3.53
379 380 2.134789 ATGGCCTGCTTAGTTTGGAG 57.865 50.000 3.32 0.00 0.00 3.86
380 381 0.038166 TGGCCTGCTTAGTTTGGAGG 59.962 55.000 3.32 0.00 44.43 4.30
381 382 0.328258 GGCCTGCTTAGTTTGGAGGA 59.672 55.000 5.49 0.00 44.39 3.71
382 383 1.271926 GGCCTGCTTAGTTTGGAGGAA 60.272 52.381 5.49 0.00 44.39 3.36
383 384 2.621668 GGCCTGCTTAGTTTGGAGGAAT 60.622 50.000 5.49 0.00 44.39 3.01
384 385 3.092301 GCCTGCTTAGTTTGGAGGAATT 58.908 45.455 5.49 0.00 44.39 2.17
385 386 3.511540 GCCTGCTTAGTTTGGAGGAATTT 59.488 43.478 5.49 0.00 44.39 1.82
386 387 4.380973 GCCTGCTTAGTTTGGAGGAATTTC 60.381 45.833 5.49 0.00 44.39 2.17
387 388 4.142600 CCTGCTTAGTTTGGAGGAATTTCG 60.143 45.833 0.00 0.00 44.39 3.46
388 389 4.647611 TGCTTAGTTTGGAGGAATTTCGA 58.352 39.130 0.00 0.00 0.00 3.71
389 390 5.253330 TGCTTAGTTTGGAGGAATTTCGAT 58.747 37.500 0.00 0.00 0.00 3.59
390 391 5.123820 TGCTTAGTTTGGAGGAATTTCGATG 59.876 40.000 0.00 0.00 0.00 3.84
391 392 5.449177 GCTTAGTTTGGAGGAATTTCGATGG 60.449 44.000 0.00 0.00 0.00 3.51
392 393 4.301072 AGTTTGGAGGAATTTCGATGGA 57.699 40.909 0.00 0.00 0.00 3.41
393 394 4.662278 AGTTTGGAGGAATTTCGATGGAA 58.338 39.130 0.00 0.00 0.00 3.53
394 395 5.264395 AGTTTGGAGGAATTTCGATGGAAT 58.736 37.500 0.00 0.00 30.88 3.01
395 396 5.716703 AGTTTGGAGGAATTTCGATGGAATT 59.283 36.000 0.00 0.00 30.88 2.17
396 397 6.211384 AGTTTGGAGGAATTTCGATGGAATTT 59.789 34.615 0.00 0.00 30.88 1.82
397 398 5.581126 TGGAGGAATTTCGATGGAATTTG 57.419 39.130 2.81 0.00 30.88 2.32
398 399 4.402155 TGGAGGAATTTCGATGGAATTTGG 59.598 41.667 2.81 0.00 30.88 3.28
399 400 4.402474 GGAGGAATTTCGATGGAATTTGGT 59.598 41.667 2.81 0.00 30.88 3.67
400 401 5.329035 AGGAATTTCGATGGAATTTGGTG 57.671 39.130 2.81 0.00 30.88 4.17
401 402 4.160252 AGGAATTTCGATGGAATTTGGTGG 59.840 41.667 2.81 0.00 30.88 4.61
402 403 4.432712 GAATTTCGATGGAATTTGGTGGG 58.567 43.478 2.81 0.00 30.88 4.61
403 404 2.889170 TTCGATGGAATTTGGTGGGA 57.111 45.000 0.00 0.00 0.00 4.37
404 405 3.380471 TTCGATGGAATTTGGTGGGAT 57.620 42.857 0.00 0.00 0.00 3.85
405 406 4.511786 TTCGATGGAATTTGGTGGGATA 57.488 40.909 0.00 0.00 0.00 2.59
406 407 4.511786 TCGATGGAATTTGGTGGGATAA 57.488 40.909 0.00 0.00 0.00 1.75
407 408 4.460263 TCGATGGAATTTGGTGGGATAAG 58.540 43.478 0.00 0.00 0.00 1.73
408 409 4.165180 TCGATGGAATTTGGTGGGATAAGA 59.835 41.667 0.00 0.00 0.00 2.10
409 410 5.072741 CGATGGAATTTGGTGGGATAAGAT 58.927 41.667 0.00 0.00 0.00 2.40
410 411 5.536161 CGATGGAATTTGGTGGGATAAGATT 59.464 40.000 0.00 0.00 0.00 2.40
411 412 6.040842 CGATGGAATTTGGTGGGATAAGATTT 59.959 38.462 0.00 0.00 0.00 2.17
412 413 7.230510 CGATGGAATTTGGTGGGATAAGATTTA 59.769 37.037 0.00 0.00 0.00 1.40
413 414 9.093458 GATGGAATTTGGTGGGATAAGATTTAT 57.907 33.333 0.00 0.00 0.00 1.40
414 415 8.248904 TGGAATTTGGTGGGATAAGATTTATG 57.751 34.615 0.00 0.00 0.00 1.90
415 416 7.843760 TGGAATTTGGTGGGATAAGATTTATGT 59.156 33.333 0.00 0.00 0.00 2.29
416 417 9.362151 GGAATTTGGTGGGATAAGATTTATGTA 57.638 33.333 0.00 0.00 0.00 2.29
418 419 8.940397 ATTTGGTGGGATAAGATTTATGTAGG 57.060 34.615 0.00 0.00 0.00 3.18
419 420 7.699709 TTGGTGGGATAAGATTTATGTAGGA 57.300 36.000 0.00 0.00 0.00 2.94
420 421 7.074653 TGGTGGGATAAGATTTATGTAGGAC 57.925 40.000 0.00 0.00 0.00 3.85
421 422 6.617784 TGGTGGGATAAGATTTATGTAGGACA 59.382 38.462 0.00 0.00 0.00 4.02
422 423 7.128109 TGGTGGGATAAGATTTATGTAGGACAA 59.872 37.037 0.00 0.00 0.00 3.18
423 424 7.996644 GGTGGGATAAGATTTATGTAGGACAAA 59.003 37.037 0.00 0.00 0.00 2.83
424 425 9.574516 GTGGGATAAGATTTATGTAGGACAAAT 57.425 33.333 0.00 0.00 0.00 2.32
439 440 5.728637 GGACAAATTCCTTTGGAGTCATT 57.271 39.130 3.42 0.00 44.97 2.57
440 441 6.101650 GGACAAATTCCTTTGGAGTCATTT 57.898 37.500 3.42 0.00 44.97 2.32
441 442 5.928264 GGACAAATTCCTTTGGAGTCATTTG 59.072 40.000 15.23 15.23 44.97 2.32
442 443 5.857268 ACAAATTCCTTTGGAGTCATTTGG 58.143 37.500 18.51 1.47 44.97 3.28
443 444 5.366477 ACAAATTCCTTTGGAGTCATTTGGT 59.634 36.000 18.51 8.19 44.97 3.67
444 445 6.126796 ACAAATTCCTTTGGAGTCATTTGGTT 60.127 34.615 18.51 4.57 44.97 3.67
445 446 4.935352 TTCCTTTGGAGTCATTTGGTTG 57.065 40.909 0.00 0.00 31.21 3.77
446 447 3.909732 TCCTTTGGAGTCATTTGGTTGT 58.090 40.909 0.00 0.00 0.00 3.32
447 448 5.055265 TCCTTTGGAGTCATTTGGTTGTA 57.945 39.130 0.00 0.00 0.00 2.41
448 449 5.450453 TCCTTTGGAGTCATTTGGTTGTAA 58.550 37.500 0.00 0.00 0.00 2.41
449 450 5.534654 TCCTTTGGAGTCATTTGGTTGTAAG 59.465 40.000 0.00 0.00 0.00 2.34
450 451 5.278957 CCTTTGGAGTCATTTGGTTGTAAGG 60.279 44.000 0.00 0.00 0.00 2.69
451 452 4.715534 TGGAGTCATTTGGTTGTAAGGA 57.284 40.909 0.00 0.00 0.00 3.36
452 453 5.055265 TGGAGTCATTTGGTTGTAAGGAA 57.945 39.130 0.00 0.00 0.00 3.36
453 454 5.640147 TGGAGTCATTTGGTTGTAAGGAAT 58.360 37.500 0.00 0.00 0.00 3.01
454 455 6.785076 TGGAGTCATTTGGTTGTAAGGAATA 58.215 36.000 0.00 0.00 0.00 1.75
455 456 6.884295 TGGAGTCATTTGGTTGTAAGGAATAG 59.116 38.462 0.00 0.00 0.00 1.73
456 457 7.110155 GGAGTCATTTGGTTGTAAGGAATAGA 58.890 38.462 0.00 0.00 0.00 1.98
457 458 7.610305 GGAGTCATTTGGTTGTAAGGAATAGAA 59.390 37.037 0.00 0.00 0.00 2.10
458 459 9.178758 GAGTCATTTGGTTGTAAGGAATAGAAT 57.821 33.333 0.00 0.00 0.00 2.40
459 460 9.178758 AGTCATTTGGTTGTAAGGAATAGAATC 57.821 33.333 0.00 0.00 0.00 2.52
460 461 8.406297 GTCATTTGGTTGTAAGGAATAGAATCC 58.594 37.037 0.00 0.00 39.96 3.01
559 560 6.998968 AATGTGAATCAAAGGACATCTCTC 57.001 37.500 0.00 0.00 0.00 3.20
560 561 5.752036 TGTGAATCAAAGGACATCTCTCT 57.248 39.130 0.00 0.00 0.00 3.10
561 562 6.119240 TGTGAATCAAAGGACATCTCTCTT 57.881 37.500 0.00 0.00 0.00 2.85
562 563 7.244886 TGTGAATCAAAGGACATCTCTCTTA 57.755 36.000 0.00 0.00 0.00 2.10
563 564 7.679783 TGTGAATCAAAGGACATCTCTCTTAA 58.320 34.615 0.00 0.00 0.00 1.85
564 565 7.821359 TGTGAATCAAAGGACATCTCTCTTAAG 59.179 37.037 0.00 0.00 0.00 1.85
565 566 7.821846 GTGAATCAAAGGACATCTCTCTTAAGT 59.178 37.037 1.63 0.00 0.00 2.24
566 567 8.378565 TGAATCAAAGGACATCTCTCTTAAGTT 58.621 33.333 1.63 0.00 0.00 2.66
567 568 9.225436 GAATCAAAGGACATCTCTCTTAAGTTT 57.775 33.333 1.63 0.00 0.00 2.66
568 569 9.579932 AATCAAAGGACATCTCTCTTAAGTTTT 57.420 29.630 1.63 0.00 0.00 2.43
569 570 8.980481 TCAAAGGACATCTCTCTTAAGTTTTT 57.020 30.769 1.63 0.00 0.00 1.94
612 613 7.931948 TGAACTAAAGAAGGCCTATACTTATGC 59.068 37.037 5.16 2.07 0.00 3.14
613 614 6.456501 ACTAAAGAAGGCCTATACTTATGCG 58.543 40.000 5.16 4.95 0.00 4.73
614 615 3.320673 AGAAGGCCTATACTTATGCGC 57.679 47.619 5.16 0.00 0.00 6.09
615 616 2.632996 AGAAGGCCTATACTTATGCGCA 59.367 45.455 14.96 14.96 0.00 6.09
616 617 3.261897 AGAAGGCCTATACTTATGCGCAT 59.738 43.478 28.23 28.23 0.00 4.73
617 618 2.977914 AGGCCTATACTTATGCGCATG 58.022 47.619 32.48 19.15 0.00 4.06
618 619 1.398390 GGCCTATACTTATGCGCATGC 59.602 52.381 32.48 22.68 43.20 4.06
630 631 1.335935 GCGCATGCACGTTTTAATGT 58.664 45.000 19.57 0.00 42.15 2.71
631 632 1.718711 GCGCATGCACGTTTTAATGTT 59.281 42.857 19.57 0.00 42.15 2.71
632 633 2.470460 GCGCATGCACGTTTTAATGTTG 60.470 45.455 19.57 0.00 42.15 3.33
633 634 2.723658 CGCATGCACGTTTTAATGTTGT 59.276 40.909 19.57 0.00 0.00 3.32
634 635 3.181377 CGCATGCACGTTTTAATGTTGTT 59.819 39.130 19.57 0.00 0.00 2.83
635 636 4.444468 GCATGCACGTTTTAATGTTGTTG 58.556 39.130 14.21 0.00 0.00 3.33
636 637 4.026145 GCATGCACGTTTTAATGTTGTTGT 60.026 37.500 14.21 0.00 0.00 3.32
637 638 5.422040 CATGCACGTTTTAATGTTGTTGTG 58.578 37.500 0.00 0.00 0.00 3.33
638 639 4.486090 TGCACGTTTTAATGTTGTTGTGT 58.514 34.783 0.00 0.00 0.00 3.72
639 640 4.324669 TGCACGTTTTAATGTTGTTGTGTG 59.675 37.500 0.00 0.00 0.00 3.82
640 641 4.259610 GCACGTTTTAATGTTGTTGTGTGG 60.260 41.667 0.00 0.00 0.00 4.17
641 642 4.859798 CACGTTTTAATGTTGTTGTGTGGT 59.140 37.500 0.00 0.00 0.00 4.16
642 643 4.859798 ACGTTTTAATGTTGTTGTGTGGTG 59.140 37.500 0.00 0.00 0.00 4.17
643 644 4.859798 CGTTTTAATGTTGTTGTGTGGTGT 59.140 37.500 0.00 0.00 0.00 4.16
644 645 5.346281 CGTTTTAATGTTGTTGTGTGGTGTT 59.654 36.000 0.00 0.00 0.00 3.32
645 646 6.529696 GTTTTAATGTTGTTGTGTGGTGTTG 58.470 36.000 0.00 0.00 0.00 3.33
646 647 2.292103 ATGTTGTTGTGTGGTGTTGC 57.708 45.000 0.00 0.00 0.00 4.17
647 648 0.109551 TGTTGTTGTGTGGTGTTGCG 60.110 50.000 0.00 0.00 0.00 4.85
648 649 0.109504 GTTGTTGTGTGGTGTTGCGT 60.110 50.000 0.00 0.00 0.00 5.24
649 650 0.598562 TTGTTGTGTGGTGTTGCGTT 59.401 45.000 0.00 0.00 0.00 4.84
650 651 1.450025 TGTTGTGTGGTGTTGCGTTA 58.550 45.000 0.00 0.00 0.00 3.18
651 652 1.130749 TGTTGTGTGGTGTTGCGTTAC 59.869 47.619 0.00 0.00 0.00 2.50
652 653 0.374063 TTGTGTGGTGTTGCGTTACG 59.626 50.000 0.00 0.00 0.00 3.18
653 654 1.277440 GTGTGGTGTTGCGTTACGG 59.723 57.895 6.94 0.00 0.00 4.02
654 655 1.153409 TGTGGTGTTGCGTTACGGT 60.153 52.632 6.94 0.00 0.00 4.83
655 656 0.743701 TGTGGTGTTGCGTTACGGTT 60.744 50.000 6.94 0.00 0.00 4.44
656 657 0.377905 GTGGTGTTGCGTTACGGTTT 59.622 50.000 6.94 0.00 0.00 3.27
657 658 1.093159 TGGTGTTGCGTTACGGTTTT 58.907 45.000 6.94 0.00 0.00 2.43
658 659 1.202154 TGGTGTTGCGTTACGGTTTTG 60.202 47.619 6.94 0.00 0.00 2.44
659 660 1.468895 GTGTTGCGTTACGGTTTTGG 58.531 50.000 6.94 0.00 0.00 3.28
660 661 1.063764 GTGTTGCGTTACGGTTTTGGA 59.936 47.619 6.94 0.00 0.00 3.53
661 662 1.331138 TGTTGCGTTACGGTTTTGGAG 59.669 47.619 6.94 0.00 0.00 3.86
662 663 1.331447 GTTGCGTTACGGTTTTGGAGT 59.669 47.619 6.94 0.00 0.00 3.85
663 664 1.219646 TGCGTTACGGTTTTGGAGTC 58.780 50.000 6.94 0.00 0.00 3.36
664 665 1.219646 GCGTTACGGTTTTGGAGTCA 58.780 50.000 6.94 0.00 0.00 3.41
665 666 1.802365 GCGTTACGGTTTTGGAGTCAT 59.198 47.619 6.94 0.00 0.00 3.06
666 667 2.412325 GCGTTACGGTTTTGGAGTCATG 60.412 50.000 6.94 0.00 0.00 3.07
667 668 2.158841 CGTTACGGTTTTGGAGTCATGG 59.841 50.000 0.00 0.00 0.00 3.66
668 669 1.816074 TACGGTTTTGGAGTCATGGC 58.184 50.000 0.00 0.00 0.00 4.40
669 670 0.110486 ACGGTTTTGGAGTCATGGCT 59.890 50.000 0.00 0.00 0.00 4.75
670 671 1.349688 ACGGTTTTGGAGTCATGGCTA 59.650 47.619 0.00 0.00 0.00 3.93
671 672 2.224670 ACGGTTTTGGAGTCATGGCTAA 60.225 45.455 0.00 0.00 0.00 3.09
672 673 2.817258 CGGTTTTGGAGTCATGGCTAAA 59.183 45.455 0.00 0.00 0.00 1.85
673 674 3.365969 CGGTTTTGGAGTCATGGCTAAAC 60.366 47.826 13.46 13.46 0.00 2.01
674 675 3.826729 GGTTTTGGAGTCATGGCTAAACT 59.173 43.478 18.74 4.26 0.00 2.66
675 676 4.082733 GGTTTTGGAGTCATGGCTAAACTC 60.083 45.833 18.74 11.92 38.94 3.01
676 677 4.640771 TTTGGAGTCATGGCTAAACTCT 57.359 40.909 0.00 0.00 39.47 3.24
677 678 3.895232 TGGAGTCATGGCTAAACTCTC 57.105 47.619 0.00 0.00 39.47 3.20
678 679 3.445008 TGGAGTCATGGCTAAACTCTCT 58.555 45.455 0.00 0.00 39.47 3.10
679 680 3.196469 TGGAGTCATGGCTAAACTCTCTG 59.804 47.826 0.00 0.00 39.47 3.35
680 681 3.196685 GGAGTCATGGCTAAACTCTCTGT 59.803 47.826 0.00 0.00 39.47 3.41
681 682 4.429108 GAGTCATGGCTAAACTCTCTGTC 58.571 47.826 0.00 0.00 37.14 3.51
682 683 4.093011 AGTCATGGCTAAACTCTCTGTCT 58.907 43.478 0.00 0.00 0.00 3.41
683 684 4.159506 AGTCATGGCTAAACTCTCTGTCTC 59.840 45.833 0.00 0.00 0.00 3.36
684 685 3.129462 TCATGGCTAAACTCTCTGTCTCG 59.871 47.826 0.00 0.00 0.00 4.04
685 686 2.515854 TGGCTAAACTCTCTGTCTCGT 58.484 47.619 0.00 0.00 0.00 4.18
686 687 3.682696 TGGCTAAACTCTCTGTCTCGTA 58.317 45.455 0.00 0.00 0.00 3.43
687 688 3.439476 TGGCTAAACTCTCTGTCTCGTAC 59.561 47.826 0.00 0.00 0.00 3.67
688 689 3.485546 GGCTAAACTCTCTGTCTCGTACG 60.486 52.174 9.53 9.53 0.00 3.67
689 690 2.615489 AAACTCTCTGTCTCGTACGC 57.385 50.000 11.24 0.00 0.00 4.42
690 691 0.803740 AACTCTCTGTCTCGTACGCC 59.196 55.000 11.24 1.26 0.00 5.68
691 692 1.348938 CTCTCTGTCTCGTACGCCG 59.651 63.158 11.24 4.12 38.13 6.46
692 693 2.277373 CTCTGTCTCGTACGCCGC 60.277 66.667 11.24 3.13 36.19 6.53
693 694 3.736482 CTCTGTCTCGTACGCCGCC 62.736 68.421 11.24 0.00 36.19 6.13
694 695 4.849329 CTGTCTCGTACGCCGCCC 62.849 72.222 11.24 0.00 36.19 6.13
701 702 4.832608 GTACGCCGCCCCCAAGAG 62.833 72.222 0.00 0.00 0.00 2.85
706 707 4.148825 CCGCCCCCAAGAGACGAG 62.149 72.222 0.00 0.00 0.00 4.18
707 708 3.382832 CGCCCCCAAGAGACGAGT 61.383 66.667 0.00 0.00 0.00 4.18
708 709 2.579738 GCCCCCAAGAGACGAGTC 59.420 66.667 0.00 0.00 0.00 3.36
709 710 3.020237 GCCCCCAAGAGACGAGTCC 62.020 68.421 0.00 0.00 0.00 3.85
710 711 2.711922 CCCCCAAGAGACGAGTCCG 61.712 68.421 0.00 0.00 42.50 4.79
711 712 2.182030 CCCAAGAGACGAGTCCGC 59.818 66.667 0.00 0.00 39.95 5.54
712 713 2.202492 CCAAGAGACGAGTCCGCG 60.202 66.667 0.00 0.00 39.95 6.46
714 715 1.081376 CAAGAGACGAGTCCGCGTT 60.081 57.895 4.92 0.00 45.72 4.84
715 716 0.663568 CAAGAGACGAGTCCGCGTTT 60.664 55.000 4.92 0.00 45.72 3.60
716 717 0.663568 AAGAGACGAGTCCGCGTTTG 60.664 55.000 4.92 0.00 45.72 2.93
717 718 2.049433 AGACGAGTCCGCGTTTGG 60.049 61.111 4.92 0.00 45.72 3.28
718 719 2.049802 GACGAGTCCGCGTTTGGA 60.050 61.111 4.92 0.00 45.72 3.53
719 720 2.049433 ACGAGTCCGCGTTTGGAG 60.049 61.111 4.92 0.00 42.71 3.86
720 721 2.809601 CGAGTCCGCGTTTGGAGG 60.810 66.667 4.92 0.00 39.14 4.30
721 722 2.434359 GAGTCCGCGTTTGGAGGG 60.434 66.667 4.92 0.00 39.14 4.30
722 723 2.920912 AGTCCGCGTTTGGAGGGA 60.921 61.111 4.92 0.00 39.14 4.20
723 724 2.434359 GTCCGCGTTTGGAGGGAG 60.434 66.667 4.92 0.00 39.14 4.30
724 725 4.388499 TCCGCGTTTGGAGGGAGC 62.388 66.667 4.92 0.00 36.06 4.70
725 726 4.697756 CCGCGTTTGGAGGGAGCA 62.698 66.667 4.92 0.00 30.87 4.26
726 727 2.668212 CGCGTTTGGAGGGAGCAA 60.668 61.111 0.00 0.00 0.00 3.91
727 728 2.954611 GCGTTTGGAGGGAGCAAC 59.045 61.111 0.00 0.00 0.00 4.17
728 729 1.600916 GCGTTTGGAGGGAGCAACT 60.601 57.895 0.00 0.00 0.00 3.16
729 730 1.856265 GCGTTTGGAGGGAGCAACTG 61.856 60.000 0.00 0.00 0.00 3.16
730 731 0.535102 CGTTTGGAGGGAGCAACTGT 60.535 55.000 0.00 0.00 0.00 3.55
731 732 0.954452 GTTTGGAGGGAGCAACTGTG 59.046 55.000 0.00 0.00 0.00 3.66
732 733 0.550914 TTTGGAGGGAGCAACTGTGT 59.449 50.000 0.00 0.00 0.00 3.72
733 734 1.429930 TTGGAGGGAGCAACTGTGTA 58.570 50.000 0.00 0.00 0.00 2.90
734 735 1.656587 TGGAGGGAGCAACTGTGTAT 58.343 50.000 0.00 0.00 0.00 2.29
735 736 1.278985 TGGAGGGAGCAACTGTGTATG 59.721 52.381 0.00 0.00 0.00 2.39
736 737 1.407437 GGAGGGAGCAACTGTGTATGG 60.407 57.143 0.00 0.00 0.00 2.74
737 738 1.555075 GAGGGAGCAACTGTGTATGGA 59.445 52.381 0.00 0.00 0.00 3.41
738 739 2.171448 GAGGGAGCAACTGTGTATGGAT 59.829 50.000 0.00 0.00 0.00 3.41
739 740 2.171448 AGGGAGCAACTGTGTATGGATC 59.829 50.000 0.00 0.00 0.00 3.36
740 741 2.171448 GGGAGCAACTGTGTATGGATCT 59.829 50.000 0.00 0.00 0.00 2.75
741 742 3.201290 GGAGCAACTGTGTATGGATCTG 58.799 50.000 0.00 0.00 0.00 2.90
742 743 3.369892 GGAGCAACTGTGTATGGATCTGT 60.370 47.826 0.00 0.00 0.00 3.41
743 744 4.141937 GGAGCAACTGTGTATGGATCTGTA 60.142 45.833 0.00 0.00 0.00 2.74
744 745 5.453903 GGAGCAACTGTGTATGGATCTGTAT 60.454 44.000 0.00 0.00 0.00 2.29
745 746 5.605534 AGCAACTGTGTATGGATCTGTATC 58.394 41.667 0.00 0.00 0.00 2.24
746 747 5.365025 AGCAACTGTGTATGGATCTGTATCT 59.635 40.000 0.00 0.00 32.29 1.98
747 748 5.464722 GCAACTGTGTATGGATCTGTATCTG 59.535 44.000 0.00 0.00 32.29 2.90
748 749 6.577103 CAACTGTGTATGGATCTGTATCTGT 58.423 40.000 0.00 0.00 32.29 3.41
749 750 6.798427 ACTGTGTATGGATCTGTATCTGTT 57.202 37.500 0.00 0.00 32.29 3.16
750 751 7.898014 ACTGTGTATGGATCTGTATCTGTTA 57.102 36.000 0.00 0.00 32.29 2.41
751 752 8.484214 ACTGTGTATGGATCTGTATCTGTTAT 57.516 34.615 0.00 0.00 32.29 1.89
752 753 8.928448 ACTGTGTATGGATCTGTATCTGTTATT 58.072 33.333 0.00 0.00 32.29 1.40
753 754 9.770097 CTGTGTATGGATCTGTATCTGTTATTT 57.230 33.333 0.00 0.00 32.29 1.40
754 755 9.546428 TGTGTATGGATCTGTATCTGTTATTTG 57.454 33.333 0.00 0.00 32.29 2.32
755 756 9.764363 GTGTATGGATCTGTATCTGTTATTTGA 57.236 33.333 0.00 0.00 32.29 2.69
756 757 9.987272 TGTATGGATCTGTATCTGTTATTTGAG 57.013 33.333 0.00 0.00 32.29 3.02
757 758 7.976135 ATGGATCTGTATCTGTTATTTGAGC 57.024 36.000 0.00 0.00 32.29 4.26
758 759 5.985530 TGGATCTGTATCTGTTATTTGAGCG 59.014 40.000 0.00 0.00 32.29 5.03
759 760 5.986135 GGATCTGTATCTGTTATTTGAGCGT 59.014 40.000 0.00 0.00 32.29 5.07
760 761 6.480320 GGATCTGTATCTGTTATTTGAGCGTT 59.520 38.462 0.00 0.00 32.29 4.84
761 762 7.011482 GGATCTGTATCTGTTATTTGAGCGTTT 59.989 37.037 0.00 0.00 32.29 3.60
762 763 7.667043 TCTGTATCTGTTATTTGAGCGTTTT 57.333 32.000 0.00 0.00 0.00 2.43
763 764 7.518161 TCTGTATCTGTTATTTGAGCGTTTTG 58.482 34.615 0.00 0.00 0.00 2.44
764 765 7.386573 TCTGTATCTGTTATTTGAGCGTTTTGA 59.613 33.333 0.00 0.00 0.00 2.69
765 766 7.295201 TGTATCTGTTATTTGAGCGTTTTGAC 58.705 34.615 0.00 0.00 0.00 3.18
766 767 4.768145 TCTGTTATTTGAGCGTTTTGACG 58.232 39.130 0.00 0.00 0.00 4.35
767 768 3.879427 TGTTATTTGAGCGTTTTGACGG 58.121 40.909 0.93 0.00 0.00 4.79
768 769 3.231160 GTTATTTGAGCGTTTTGACGGG 58.769 45.455 0.93 0.00 0.00 5.28
769 770 1.600023 ATTTGAGCGTTTTGACGGGA 58.400 45.000 0.93 0.00 0.00 5.14
770 771 0.658897 TTTGAGCGTTTTGACGGGAC 59.341 50.000 0.93 0.00 0.00 4.46
771 772 0.462225 TTGAGCGTTTTGACGGGACA 60.462 50.000 0.93 0.00 0.00 4.02
772 773 1.155424 TGAGCGTTTTGACGGGACAC 61.155 55.000 0.93 0.00 0.00 3.67
787 788 3.967401 GGGACACGACTATTCTTAGCTC 58.033 50.000 0.00 0.00 0.00 4.09
788 789 3.380637 GGGACACGACTATTCTTAGCTCA 59.619 47.826 0.00 0.00 0.00 4.26
789 790 4.142227 GGGACACGACTATTCTTAGCTCAA 60.142 45.833 0.00 0.00 0.00 3.02
790 791 5.038033 GGACACGACTATTCTTAGCTCAAG 58.962 45.833 0.00 0.00 35.38 3.02
791 792 4.425520 ACACGACTATTCTTAGCTCAAGC 58.574 43.478 0.00 0.00 42.49 4.01
814 815 7.313951 GCTCAAATAAGCTCTAATGAACAGT 57.686 36.000 0.00 0.00 39.27 3.55
815 816 8.425577 GCTCAAATAAGCTCTAATGAACAGTA 57.574 34.615 0.00 0.00 39.27 2.74
816 817 9.050601 GCTCAAATAAGCTCTAATGAACAGTAT 57.949 33.333 0.00 0.00 39.27 2.12
877 878 9.763837 ACCTAATAATAAAGCAGGTAAGGTTTT 57.236 29.630 0.00 0.00 37.85 2.43
1155 1203 8.254508 GCCTTTTCTCTCTCTAATCTTCTTGTA 58.745 37.037 0.00 0.00 0.00 2.41
1233 1287 4.388499 AGGTTCGAACGCCGCCAT 62.388 61.111 21.34 0.00 38.37 4.40
1303 1357 0.635009 TCCACCTCCTCTACCCGATT 59.365 55.000 0.00 0.00 0.00 3.34
2163 2245 2.677902 GCAGACCAAGTCCATTGATCGA 60.678 50.000 0.00 0.00 41.83 3.59
2357 2443 4.976224 TGAATTCATTCTGTGATGCCAG 57.024 40.909 3.38 0.00 36.54 4.85
2819 2909 6.876789 TCGGTAGAGCTTTCATATTTCAACAA 59.123 34.615 0.00 0.00 0.00 2.83
3812 5856 1.149101 AGCATCCCCATATTTCCCGT 58.851 50.000 0.00 0.00 0.00 5.28
3891 5935 4.042062 TCTCATGACCAAGTTCCTCAACAT 59.958 41.667 0.00 0.00 34.60 2.71
4138 6419 2.363795 ACCGAATCTCCTCGCCCA 60.364 61.111 0.00 0.00 37.51 5.36
4219 6500 1.963515 CCTAACCTGCTGCTTTTGGTT 59.036 47.619 18.02 18.02 44.03 3.67
4227 6508 2.694628 TGCTGCTTTTGGTTTCTGATGT 59.305 40.909 0.00 0.00 0.00 3.06
4239 6520 0.976641 TCTGATGTTGCCCTCGACTT 59.023 50.000 0.00 0.00 0.00 3.01
4461 6743 2.169769 CACGATTAGGCTTCCAAGGGTA 59.830 50.000 0.00 0.00 0.00 3.69
4612 6894 4.786454 TGGCTAACCTAAACTGAATAGGGT 59.214 41.667 12.69 9.68 43.55 4.34
4789 7265 9.471702 AGTGAACTGAATTATTCATGGAGAATT 57.528 29.630 6.29 6.29 44.48 2.17
4914 7391 5.675538 AGAGTTTTGCAAGTGAGAGTTACT 58.324 37.500 0.00 0.00 0.00 2.24
5259 7748 3.450893 CATGACATAGATGTGATGCGC 57.549 47.619 8.80 0.00 43.39 6.09
6145 8638 3.000727 CCATCACCAAGGAAGTACGTTC 58.999 50.000 0.00 0.00 0.00 3.95
6222 8715 8.730680 TGCTATTTTAAATTCTGAGAGGTGTTC 58.269 33.333 0.00 0.00 0.00 3.18
6310 8803 9.643693 GGATTAATTTGTCATGTCATTTGAACT 57.356 29.630 0.00 0.00 0.00 3.01
6771 9471 1.145571 TGGGTTTTACCAGCTGGAGT 58.854 50.000 39.19 20.47 41.02 3.85
7089 9936 8.393671 TGCTACTACCTAATACTAGAAGAAGC 57.606 38.462 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.459145 TGGAATGTCGTTTCGTCTCAAA 58.541 40.909 0.00 0.00 0.00 2.69
8 9 3.595709 TGTTTGGAATGTCGTTTCGTC 57.404 42.857 0.00 0.00 0.00 4.20
9 10 3.242936 CCTTGTTTGGAATGTCGTTTCGT 60.243 43.478 0.00 0.00 0.00 3.85
10 11 3.296628 CCTTGTTTGGAATGTCGTTTCG 58.703 45.455 0.00 0.00 0.00 3.46
11 12 3.049912 GCCTTGTTTGGAATGTCGTTTC 58.950 45.455 0.00 0.00 0.00 2.78
14 15 0.958822 GGCCTTGTTTGGAATGTCGT 59.041 50.000 0.00 0.00 0.00 4.34
15 16 1.247567 AGGCCTTGTTTGGAATGTCG 58.752 50.000 0.00 0.00 0.00 4.35
16 17 3.365969 CGTAAGGCCTTGTTTGGAATGTC 60.366 47.826 28.77 3.10 0.00 3.06
17 18 2.556622 CGTAAGGCCTTGTTTGGAATGT 59.443 45.455 28.77 0.00 0.00 2.71
18 19 2.817258 TCGTAAGGCCTTGTTTGGAATG 59.183 45.455 28.77 11.48 38.47 2.67
22 23 1.535462 CACTCGTAAGGCCTTGTTTGG 59.465 52.381 28.77 15.45 38.47 3.28
23 24 2.218603 ACACTCGTAAGGCCTTGTTTG 58.781 47.619 28.77 18.18 38.47 2.93
24 25 2.158871 TGACACTCGTAAGGCCTTGTTT 60.159 45.455 28.77 10.16 38.47 2.83
25 26 1.414919 TGACACTCGTAAGGCCTTGTT 59.585 47.619 28.77 4.09 38.47 2.83
26 27 1.045407 TGACACTCGTAAGGCCTTGT 58.955 50.000 28.77 16.99 38.47 3.16
27 28 2.163818 TTGACACTCGTAAGGCCTTG 57.836 50.000 28.77 13.48 38.47 3.61
28 29 3.418684 AATTGACACTCGTAAGGCCTT 57.581 42.857 24.18 24.18 38.47 4.35
29 30 3.418684 AAATTGACACTCGTAAGGCCT 57.581 42.857 0.00 0.00 38.47 5.19
30 31 3.119955 GGAAAATTGACACTCGTAAGGCC 60.120 47.826 0.00 0.00 38.47 5.19
31 32 3.500680 TGGAAAATTGACACTCGTAAGGC 59.499 43.478 0.00 0.00 38.47 4.35
32 33 5.181245 ACATGGAAAATTGACACTCGTAAGG 59.819 40.000 0.00 0.00 38.47 2.69
33 34 6.241207 ACATGGAAAATTGACACTCGTAAG 57.759 37.500 0.00 0.00 0.00 2.34
34 35 5.180492 GGACATGGAAAATTGACACTCGTAA 59.820 40.000 0.00 0.00 0.00 3.18
35 36 4.693566 GGACATGGAAAATTGACACTCGTA 59.306 41.667 0.00 0.00 0.00 3.43
36 37 3.502211 GGACATGGAAAATTGACACTCGT 59.498 43.478 0.00 0.00 0.00 4.18
37 38 3.501828 TGGACATGGAAAATTGACACTCG 59.498 43.478 0.00 0.00 0.00 4.18
38 39 4.278170 TGTGGACATGGAAAATTGACACTC 59.722 41.667 0.00 0.00 0.00 3.51
39 40 4.214310 TGTGGACATGGAAAATTGACACT 58.786 39.130 0.00 0.00 0.00 3.55
40 41 4.582701 TGTGGACATGGAAAATTGACAC 57.417 40.909 0.00 0.00 0.00 3.67
41 42 4.082841 CGATGTGGACATGGAAAATTGACA 60.083 41.667 0.00 0.00 36.57 3.58
42 43 4.082787 ACGATGTGGACATGGAAAATTGAC 60.083 41.667 8.57 0.00 36.57 3.18
43 44 4.078537 ACGATGTGGACATGGAAAATTGA 58.921 39.130 8.57 0.00 36.57 2.57
44 45 4.082841 TCACGATGTGGACATGGAAAATTG 60.083 41.667 8.57 0.00 36.57 2.32
45 46 4.078537 TCACGATGTGGACATGGAAAATT 58.921 39.130 8.57 0.00 36.57 1.82
46 47 3.684908 TCACGATGTGGACATGGAAAAT 58.315 40.909 8.57 0.00 36.57 1.82
47 48 3.133141 TCACGATGTGGACATGGAAAA 57.867 42.857 8.57 0.00 36.57 2.29
48 49 2.849294 TCACGATGTGGACATGGAAA 57.151 45.000 8.57 0.00 36.57 3.13
49 50 3.348647 AATCACGATGTGGACATGGAA 57.651 42.857 8.57 0.00 36.57 3.53
50 51 3.348647 AAATCACGATGTGGACATGGA 57.651 42.857 8.57 0.00 36.57 3.41
51 52 4.496341 GCTTAAATCACGATGTGGACATGG 60.496 45.833 0.00 0.00 36.57 3.66
52 53 4.496341 GGCTTAAATCACGATGTGGACATG 60.496 45.833 0.00 0.00 36.57 3.21
53 54 3.627577 GGCTTAAATCACGATGTGGACAT 59.372 43.478 0.00 0.00 39.70 3.06
54 55 3.006940 GGCTTAAATCACGATGTGGACA 58.993 45.455 0.00 0.00 33.87 4.02
55 56 3.006940 TGGCTTAAATCACGATGTGGAC 58.993 45.455 0.00 0.00 33.87 4.02
56 57 3.342377 TGGCTTAAATCACGATGTGGA 57.658 42.857 0.00 0.00 33.87 4.02
57 58 3.181497 CCTTGGCTTAAATCACGATGTGG 60.181 47.826 0.00 0.00 33.87 4.17
58 59 3.440173 ACCTTGGCTTAAATCACGATGTG 59.560 43.478 0.00 0.00 34.45 3.21
59 60 3.686016 ACCTTGGCTTAAATCACGATGT 58.314 40.909 0.00 0.00 0.00 3.06
60 61 3.242413 CGACCTTGGCTTAAATCACGATG 60.242 47.826 0.00 0.00 0.00 3.84
61 62 2.936498 CGACCTTGGCTTAAATCACGAT 59.064 45.455 0.00 0.00 0.00 3.73
62 63 2.289195 ACGACCTTGGCTTAAATCACGA 60.289 45.455 0.00 0.00 0.00 4.35
63 64 2.073816 ACGACCTTGGCTTAAATCACG 58.926 47.619 0.00 0.00 0.00 4.35
64 65 5.616488 TTAACGACCTTGGCTTAAATCAC 57.384 39.130 0.00 0.00 0.00 3.06
65 66 5.392595 GCATTAACGACCTTGGCTTAAATCA 60.393 40.000 0.00 0.00 0.00 2.57
78 79 2.156098 TCCCTGTTTGCATTAACGACC 58.844 47.619 0.00 0.00 0.00 4.79
82 83 5.364778 ACCTTTTTCCCTGTTTGCATTAAC 58.635 37.500 0.00 0.00 0.00 2.01
114 115 4.262506 GGAATGGGAACTAGGAAGATACGG 60.263 50.000 0.00 0.00 0.00 4.02
132 133 5.539193 CCCTACTAACACCCTACTAGGAATG 59.461 48.000 3.36 4.50 37.67 2.67
136 137 4.213513 CACCCTACTAACACCCTACTAGG 58.786 52.174 0.00 0.00 34.30 3.02
146 147 2.114141 ACCTAACCCCACCCTACTAACA 59.886 50.000 0.00 0.00 0.00 2.41
147 148 2.768527 GACCTAACCCCACCCTACTAAC 59.231 54.545 0.00 0.00 0.00 2.34
148 149 2.293118 GGACCTAACCCCACCCTACTAA 60.293 54.545 0.00 0.00 0.00 2.24
149 150 1.291939 GGACCTAACCCCACCCTACTA 59.708 57.143 0.00 0.00 0.00 1.82
150 151 0.043788 GGACCTAACCCCACCCTACT 59.956 60.000 0.00 0.00 0.00 2.57
151 152 0.984961 GGGACCTAACCCCACCCTAC 60.985 65.000 0.00 0.00 43.81 3.18
152 153 1.397413 GGGACCTAACCCCACCCTA 59.603 63.158 0.00 0.00 43.81 3.53
153 154 2.126603 GGGACCTAACCCCACCCT 59.873 66.667 0.00 0.00 43.81 4.34
169 170 8.589335 TTCTTTCTAAATCTTAATCGATCGGG 57.411 34.615 16.41 1.28 0.00 5.14
201 202 8.709386 ATTTGATATTACATAGAGATCCGTGC 57.291 34.615 0.00 0.00 0.00 5.34
234 235 4.202223 ACTTGGTTACGTCTCAGTTGATGT 60.202 41.667 0.00 0.00 39.29 3.06
263 264 4.396790 GTCTCAGTACCAAGTCTCAGTAGG 59.603 50.000 0.00 0.00 0.00 3.18
265 266 5.244189 AGTCTCAGTACCAAGTCTCAGTA 57.756 43.478 0.00 0.00 0.00 2.74
268 269 4.459685 GCTAAGTCTCAGTACCAAGTCTCA 59.540 45.833 0.00 0.00 0.00 3.27
269 270 4.459685 TGCTAAGTCTCAGTACCAAGTCTC 59.540 45.833 0.00 0.00 0.00 3.36
270 271 4.408276 TGCTAAGTCTCAGTACCAAGTCT 58.592 43.478 0.00 0.00 0.00 3.24
271 272 4.785511 TGCTAAGTCTCAGTACCAAGTC 57.214 45.455 0.00 0.00 0.00 3.01
272 273 5.546621 TTTGCTAAGTCTCAGTACCAAGT 57.453 39.130 0.00 0.00 0.00 3.16
273 274 5.992217 AGTTTTGCTAAGTCTCAGTACCAAG 59.008 40.000 0.00 0.00 0.00 3.61
274 275 5.925509 AGTTTTGCTAAGTCTCAGTACCAA 58.074 37.500 0.00 0.00 0.00 3.67
275 276 5.546621 AGTTTTGCTAAGTCTCAGTACCA 57.453 39.130 0.00 0.00 0.00 3.25
276 277 7.278203 GGAATAGTTTTGCTAAGTCTCAGTACC 59.722 40.741 0.00 0.00 32.72 3.34
277 278 8.035984 AGGAATAGTTTTGCTAAGTCTCAGTAC 58.964 37.037 0.00 0.00 32.72 2.73
278 279 8.035394 CAGGAATAGTTTTGCTAAGTCTCAGTA 58.965 37.037 0.00 0.00 32.72 2.74
279 280 6.876257 CAGGAATAGTTTTGCTAAGTCTCAGT 59.124 38.462 0.00 0.00 32.72 3.41
280 281 7.099764 TCAGGAATAGTTTTGCTAAGTCTCAG 58.900 38.462 0.00 0.00 32.72 3.35
281 282 7.004555 TCAGGAATAGTTTTGCTAAGTCTCA 57.995 36.000 0.00 0.00 32.72 3.27
304 305 7.272515 GGTCGACGTGTCTACTATAGTAGTATC 59.727 44.444 30.24 22.89 46.08 2.24
316 317 2.094854 AGGAATTGGTCGACGTGTCTAC 60.095 50.000 9.92 0.00 0.00 2.59
333 334 6.299141 AGATACAGTGCAAAAGAAGAAGGAA 58.701 36.000 0.00 0.00 0.00 3.36
334 335 5.869579 AGATACAGTGCAAAAGAAGAAGGA 58.130 37.500 0.00 0.00 0.00 3.36
335 336 7.856145 ATAGATACAGTGCAAAAGAAGAAGG 57.144 36.000 0.00 0.00 0.00 3.46
337 338 9.330063 CCATATAGATACAGTGCAAAAGAAGAA 57.670 33.333 0.00 0.00 0.00 2.52
338 339 7.442364 GCCATATAGATACAGTGCAAAAGAAGA 59.558 37.037 0.00 0.00 0.00 2.87
339 340 7.308229 GGCCATATAGATACAGTGCAAAAGAAG 60.308 40.741 0.00 0.00 0.00 2.85
340 341 6.486657 GGCCATATAGATACAGTGCAAAAGAA 59.513 38.462 0.00 0.00 0.00 2.52
341 342 5.997746 GGCCATATAGATACAGTGCAAAAGA 59.002 40.000 0.00 0.00 0.00 2.52
342 343 6.000219 AGGCCATATAGATACAGTGCAAAAG 59.000 40.000 5.01 0.00 0.00 2.27
343 344 5.764686 CAGGCCATATAGATACAGTGCAAAA 59.235 40.000 5.01 0.00 0.00 2.44
344 345 5.308014 CAGGCCATATAGATACAGTGCAAA 58.692 41.667 5.01 0.00 0.00 3.68
345 346 4.803924 GCAGGCCATATAGATACAGTGCAA 60.804 45.833 5.01 0.00 0.00 4.08
346 347 3.306989 GCAGGCCATATAGATACAGTGCA 60.307 47.826 5.01 0.00 0.00 4.57
347 348 3.055530 AGCAGGCCATATAGATACAGTGC 60.056 47.826 5.01 0.13 0.00 4.40
348 349 4.815533 AGCAGGCCATATAGATACAGTG 57.184 45.455 5.01 0.00 0.00 3.66
349 350 6.019748 ACTAAGCAGGCCATATAGATACAGT 58.980 40.000 5.01 0.00 0.00 3.55
350 351 6.537453 ACTAAGCAGGCCATATAGATACAG 57.463 41.667 5.01 0.00 0.00 2.74
351 352 6.935240 AACTAAGCAGGCCATATAGATACA 57.065 37.500 5.01 0.00 0.00 2.29
352 353 6.595716 CCAAACTAAGCAGGCCATATAGATAC 59.404 42.308 5.01 0.00 0.00 2.24
353 354 6.500400 TCCAAACTAAGCAGGCCATATAGATA 59.500 38.462 5.01 0.00 0.00 1.98
354 355 5.310594 TCCAAACTAAGCAGGCCATATAGAT 59.689 40.000 5.01 0.00 0.00 1.98
355 356 4.658435 TCCAAACTAAGCAGGCCATATAGA 59.342 41.667 5.01 0.00 0.00 1.98
356 357 4.973168 TCCAAACTAAGCAGGCCATATAG 58.027 43.478 5.01 4.37 0.00 1.31
357 358 4.202461 CCTCCAAACTAAGCAGGCCATATA 60.202 45.833 5.01 0.00 0.00 0.86
358 359 3.435601 CCTCCAAACTAAGCAGGCCATAT 60.436 47.826 5.01 0.00 0.00 1.78
359 360 2.092429 CCTCCAAACTAAGCAGGCCATA 60.092 50.000 5.01 0.00 0.00 2.74
360 361 1.341383 CCTCCAAACTAAGCAGGCCAT 60.341 52.381 5.01 0.00 0.00 4.40
361 362 0.038166 CCTCCAAACTAAGCAGGCCA 59.962 55.000 5.01 0.00 0.00 5.36
362 363 0.328258 TCCTCCAAACTAAGCAGGCC 59.672 55.000 0.00 0.00 0.00 5.19
363 364 2.200373 TTCCTCCAAACTAAGCAGGC 57.800 50.000 0.00 0.00 0.00 4.85
364 365 4.142600 CGAAATTCCTCCAAACTAAGCAGG 60.143 45.833 0.00 0.00 0.00 4.85
365 366 4.695455 TCGAAATTCCTCCAAACTAAGCAG 59.305 41.667 0.00 0.00 0.00 4.24
366 367 4.647611 TCGAAATTCCTCCAAACTAAGCA 58.352 39.130 0.00 0.00 0.00 3.91
367 368 5.449177 CCATCGAAATTCCTCCAAACTAAGC 60.449 44.000 0.00 0.00 0.00 3.09
368 369 5.880332 TCCATCGAAATTCCTCCAAACTAAG 59.120 40.000 0.00 0.00 0.00 2.18
369 370 5.811190 TCCATCGAAATTCCTCCAAACTAA 58.189 37.500 0.00 0.00 0.00 2.24
370 371 5.429681 TCCATCGAAATTCCTCCAAACTA 57.570 39.130 0.00 0.00 0.00 2.24
371 372 4.301072 TCCATCGAAATTCCTCCAAACT 57.699 40.909 0.00 0.00 0.00 2.66
372 373 5.582689 ATTCCATCGAAATTCCTCCAAAC 57.417 39.130 0.00 0.00 0.00 2.93
373 374 6.397272 CAAATTCCATCGAAATTCCTCCAAA 58.603 36.000 0.00 0.00 0.00 3.28
374 375 5.105392 CCAAATTCCATCGAAATTCCTCCAA 60.105 40.000 0.00 0.00 0.00 3.53
375 376 4.402155 CCAAATTCCATCGAAATTCCTCCA 59.598 41.667 0.00 0.00 0.00 3.86
376 377 4.402474 ACCAAATTCCATCGAAATTCCTCC 59.598 41.667 0.00 0.00 0.00 4.30
377 378 5.343249 CACCAAATTCCATCGAAATTCCTC 58.657 41.667 0.00 0.00 0.00 3.71
378 379 4.160252 CCACCAAATTCCATCGAAATTCCT 59.840 41.667 0.00 0.00 0.00 3.36
379 380 4.432712 CCACCAAATTCCATCGAAATTCC 58.567 43.478 0.00 0.00 0.00 3.01
380 381 4.159506 TCCCACCAAATTCCATCGAAATTC 59.840 41.667 0.00 0.00 0.00 2.17
381 382 4.093011 TCCCACCAAATTCCATCGAAATT 58.907 39.130 0.00 0.00 0.00 1.82
382 383 3.707316 TCCCACCAAATTCCATCGAAAT 58.293 40.909 0.00 0.00 0.00 2.17
383 384 3.162147 TCCCACCAAATTCCATCGAAA 57.838 42.857 0.00 0.00 0.00 3.46
384 385 2.889170 TCCCACCAAATTCCATCGAA 57.111 45.000 0.00 0.00 0.00 3.71
385 386 4.165180 TCTTATCCCACCAAATTCCATCGA 59.835 41.667 0.00 0.00 0.00 3.59
386 387 4.460263 TCTTATCCCACCAAATTCCATCG 58.540 43.478 0.00 0.00 0.00 3.84
387 388 6.983906 AATCTTATCCCACCAAATTCCATC 57.016 37.500 0.00 0.00 0.00 3.51
388 389 8.873144 CATAAATCTTATCCCACCAAATTCCAT 58.127 33.333 0.00 0.00 0.00 3.41
389 390 7.843760 ACATAAATCTTATCCCACCAAATTCCA 59.156 33.333 0.00 0.00 0.00 3.53
390 391 8.250143 ACATAAATCTTATCCCACCAAATTCC 57.750 34.615 0.00 0.00 0.00 3.01
392 393 9.367160 CCTACATAAATCTTATCCCACCAAATT 57.633 33.333 0.00 0.00 0.00 1.82
393 394 8.732854 TCCTACATAAATCTTATCCCACCAAAT 58.267 33.333 0.00 0.00 0.00 2.32
394 395 7.996644 GTCCTACATAAATCTTATCCCACCAAA 59.003 37.037 0.00 0.00 0.00 3.28
395 396 7.128109 TGTCCTACATAAATCTTATCCCACCAA 59.872 37.037 0.00 0.00 0.00 3.67
396 397 6.617784 TGTCCTACATAAATCTTATCCCACCA 59.382 38.462 0.00 0.00 0.00 4.17
397 398 7.074653 TGTCCTACATAAATCTTATCCCACC 57.925 40.000 0.00 0.00 0.00 4.61
398 399 8.974060 TTTGTCCTACATAAATCTTATCCCAC 57.026 34.615 0.00 0.00 0.00 4.61
418 419 5.928264 CCAAATGACTCCAAAGGAATTTGTC 59.072 40.000 15.27 7.97 37.53 3.18
419 420 5.366477 ACCAAATGACTCCAAAGGAATTTGT 59.634 36.000 15.27 0.00 37.53 2.83
420 421 5.857268 ACCAAATGACTCCAAAGGAATTTG 58.143 37.500 11.85 11.85 38.21 2.32
421 422 6.126796 ACAACCAAATGACTCCAAAGGAATTT 60.127 34.615 0.00 0.00 0.00 1.82
422 423 5.366477 ACAACCAAATGACTCCAAAGGAATT 59.634 36.000 0.00 0.00 0.00 2.17
423 424 4.901250 ACAACCAAATGACTCCAAAGGAAT 59.099 37.500 0.00 0.00 0.00 3.01
424 425 4.285863 ACAACCAAATGACTCCAAAGGAA 58.714 39.130 0.00 0.00 0.00 3.36
425 426 3.909732 ACAACCAAATGACTCCAAAGGA 58.090 40.909 0.00 0.00 0.00 3.36
426 427 5.278957 CCTTACAACCAAATGACTCCAAAGG 60.279 44.000 0.00 0.00 0.00 3.11
427 428 5.534654 TCCTTACAACCAAATGACTCCAAAG 59.465 40.000 0.00 0.00 0.00 2.77
428 429 5.450453 TCCTTACAACCAAATGACTCCAAA 58.550 37.500 0.00 0.00 0.00 3.28
429 430 5.055265 TCCTTACAACCAAATGACTCCAA 57.945 39.130 0.00 0.00 0.00 3.53
430 431 4.715534 TCCTTACAACCAAATGACTCCA 57.284 40.909 0.00 0.00 0.00 3.86
431 432 7.110155 TCTATTCCTTACAACCAAATGACTCC 58.890 38.462 0.00 0.00 0.00 3.85
432 433 8.561738 TTCTATTCCTTACAACCAAATGACTC 57.438 34.615 0.00 0.00 0.00 3.36
433 434 9.178758 GATTCTATTCCTTACAACCAAATGACT 57.821 33.333 0.00 0.00 0.00 3.41
434 435 8.406297 GGATTCTATTCCTTACAACCAAATGAC 58.594 37.037 0.00 0.00 32.68 3.06
435 436 8.336235 AGGATTCTATTCCTTACAACCAAATGA 58.664 33.333 0.00 0.00 43.88 2.57
436 437 8.525290 AGGATTCTATTCCTTACAACCAAATG 57.475 34.615 0.00 0.00 43.88 2.32
533 534 9.770097 GAGAGATGTCCTTTGATTCACATTATA 57.230 33.333 0.00 0.00 29.43 0.98
534 535 8.492782 AGAGAGATGTCCTTTGATTCACATTAT 58.507 33.333 0.00 0.00 29.43 1.28
535 536 7.855375 AGAGAGATGTCCTTTGATTCACATTA 58.145 34.615 0.00 0.00 29.43 1.90
536 537 6.719301 AGAGAGATGTCCTTTGATTCACATT 58.281 36.000 0.00 0.00 29.43 2.71
537 538 6.310764 AGAGAGATGTCCTTTGATTCACAT 57.689 37.500 0.00 0.00 32.02 3.21
538 539 5.752036 AGAGAGATGTCCTTTGATTCACA 57.248 39.130 0.00 0.00 0.00 3.58
539 540 7.821846 ACTTAAGAGAGATGTCCTTTGATTCAC 59.178 37.037 10.09 0.00 0.00 3.18
540 541 7.911651 ACTTAAGAGAGATGTCCTTTGATTCA 58.088 34.615 10.09 0.00 0.00 2.57
541 542 8.785329 AACTTAAGAGAGATGTCCTTTGATTC 57.215 34.615 10.09 0.00 0.00 2.52
542 543 9.579932 AAAACTTAAGAGAGATGTCCTTTGATT 57.420 29.630 10.09 0.00 0.00 2.57
543 544 9.579932 AAAAACTTAAGAGAGATGTCCTTTGAT 57.420 29.630 10.09 0.00 0.00 2.57
544 545 8.980481 AAAAACTTAAGAGAGATGTCCTTTGA 57.020 30.769 10.09 0.00 0.00 2.69
586 587 7.931948 GCATAAGTATAGGCCTTCTTTAGTTCA 59.068 37.037 12.58 0.00 32.78 3.18
587 588 7.116519 CGCATAAGTATAGGCCTTCTTTAGTTC 59.883 40.741 12.58 0.00 35.44 3.01
588 589 6.929606 CGCATAAGTATAGGCCTTCTTTAGTT 59.070 38.462 12.58 9.91 35.44 2.24
589 590 6.456501 CGCATAAGTATAGGCCTTCTTTAGT 58.543 40.000 12.58 0.00 35.44 2.24
590 591 5.348997 GCGCATAAGTATAGGCCTTCTTTAG 59.651 44.000 12.58 10.45 35.44 1.85
591 592 5.221561 TGCGCATAAGTATAGGCCTTCTTTA 60.222 40.000 12.58 5.86 35.44 1.85
592 593 4.065789 GCGCATAAGTATAGGCCTTCTTT 58.934 43.478 12.58 3.49 35.44 2.52
593 594 3.071023 TGCGCATAAGTATAGGCCTTCTT 59.929 43.478 12.58 15.89 35.44 2.52
594 595 2.632996 TGCGCATAAGTATAGGCCTTCT 59.367 45.455 12.58 4.58 35.44 2.85
595 596 3.040147 TGCGCATAAGTATAGGCCTTC 57.960 47.619 12.58 1.81 35.44 3.46
596 597 3.338249 CATGCGCATAAGTATAGGCCTT 58.662 45.455 24.84 0.81 35.44 4.35
597 598 2.936993 GCATGCGCATAAGTATAGGCCT 60.937 50.000 24.84 11.78 35.44 5.19
598 599 1.398390 GCATGCGCATAAGTATAGGCC 59.602 52.381 24.84 0.00 35.44 5.19
599 600 2.076100 TGCATGCGCATAAGTATAGGC 58.924 47.619 24.84 19.43 45.36 3.93
611 612 1.335935 ACATTAAAACGTGCATGCGC 58.664 45.000 21.37 21.37 39.24 6.09
612 613 2.723658 ACAACATTAAAACGTGCATGCG 59.276 40.909 14.09 1.59 37.94 4.73
613 614 4.026145 ACAACAACATTAAAACGTGCATGC 60.026 37.500 11.82 11.82 0.00 4.06
614 615 5.005203 ACACAACAACATTAAAACGTGCATG 59.995 36.000 3.82 3.82 0.00 4.06
615 616 5.005203 CACACAACAACATTAAAACGTGCAT 59.995 36.000 0.00 0.00 0.00 3.96
616 617 4.324669 CACACAACAACATTAAAACGTGCA 59.675 37.500 0.00 0.00 0.00 4.57
617 618 4.259610 CCACACAACAACATTAAAACGTGC 60.260 41.667 0.00 0.00 0.00 5.34
618 619 4.859798 ACCACACAACAACATTAAAACGTG 59.140 37.500 0.00 0.00 0.00 4.49
619 620 4.859798 CACCACACAACAACATTAAAACGT 59.140 37.500 0.00 0.00 0.00 3.99
620 621 4.859798 ACACCACACAACAACATTAAAACG 59.140 37.500 0.00 0.00 0.00 3.60
621 622 6.529696 CAACACCACACAACAACATTAAAAC 58.470 36.000 0.00 0.00 0.00 2.43
622 623 5.120830 GCAACACCACACAACAACATTAAAA 59.879 36.000 0.00 0.00 0.00 1.52
623 624 4.627467 GCAACACCACACAACAACATTAAA 59.373 37.500 0.00 0.00 0.00 1.52
624 625 4.177026 GCAACACCACACAACAACATTAA 58.823 39.130 0.00 0.00 0.00 1.40
625 626 3.732169 CGCAACACCACACAACAACATTA 60.732 43.478 0.00 0.00 0.00 1.90
626 627 2.615869 GCAACACCACACAACAACATT 58.384 42.857 0.00 0.00 0.00 2.71
627 628 1.468908 CGCAACACCACACAACAACAT 60.469 47.619 0.00 0.00 0.00 2.71
628 629 0.109551 CGCAACACCACACAACAACA 60.110 50.000 0.00 0.00 0.00 3.33
629 630 0.109504 ACGCAACACCACACAACAAC 60.110 50.000 0.00 0.00 0.00 3.32
630 631 0.598562 AACGCAACACCACACAACAA 59.401 45.000 0.00 0.00 0.00 2.83
631 632 1.130749 GTAACGCAACACCACACAACA 59.869 47.619 0.00 0.00 0.00 3.33
632 633 1.817609 GTAACGCAACACCACACAAC 58.182 50.000 0.00 0.00 0.00 3.32
633 634 0.374063 CGTAACGCAACACCACACAA 59.626 50.000 0.00 0.00 0.00 3.33
634 635 1.429927 CCGTAACGCAACACCACACA 61.430 55.000 0.00 0.00 0.00 3.72
635 636 1.277440 CCGTAACGCAACACCACAC 59.723 57.895 0.00 0.00 0.00 3.82
636 637 0.743701 AACCGTAACGCAACACCACA 60.744 50.000 0.00 0.00 0.00 4.17
637 638 0.377905 AAACCGTAACGCAACACCAC 59.622 50.000 0.00 0.00 0.00 4.16
638 639 1.093159 AAAACCGTAACGCAACACCA 58.907 45.000 0.00 0.00 0.00 4.17
639 640 1.468895 CAAAACCGTAACGCAACACC 58.531 50.000 0.00 0.00 0.00 4.16
640 641 1.063764 TCCAAAACCGTAACGCAACAC 59.936 47.619 0.00 0.00 0.00 3.32
641 642 1.331138 CTCCAAAACCGTAACGCAACA 59.669 47.619 0.00 0.00 0.00 3.33
642 643 1.331447 ACTCCAAAACCGTAACGCAAC 59.669 47.619 0.00 0.00 0.00 4.17
643 644 1.598601 GACTCCAAAACCGTAACGCAA 59.401 47.619 0.00 0.00 0.00 4.85
644 645 1.219646 GACTCCAAAACCGTAACGCA 58.780 50.000 0.00 0.00 0.00 5.24
645 646 1.219646 TGACTCCAAAACCGTAACGC 58.780 50.000 0.00 0.00 0.00 4.84
646 647 2.158841 CCATGACTCCAAAACCGTAACG 59.841 50.000 0.00 0.00 0.00 3.18
647 648 2.095415 GCCATGACTCCAAAACCGTAAC 60.095 50.000 0.00 0.00 0.00 2.50
648 649 2.156098 GCCATGACTCCAAAACCGTAA 58.844 47.619 0.00 0.00 0.00 3.18
649 650 1.349688 AGCCATGACTCCAAAACCGTA 59.650 47.619 0.00 0.00 0.00 4.02
650 651 0.110486 AGCCATGACTCCAAAACCGT 59.890 50.000 0.00 0.00 0.00 4.83
651 652 2.107950 TAGCCATGACTCCAAAACCG 57.892 50.000 0.00 0.00 0.00 4.44
652 653 3.826729 AGTTTAGCCATGACTCCAAAACC 59.173 43.478 0.00 0.00 0.00 3.27
653 654 4.762251 AGAGTTTAGCCATGACTCCAAAAC 59.238 41.667 7.65 3.50 40.44 2.43
654 655 4.985538 AGAGTTTAGCCATGACTCCAAAA 58.014 39.130 7.65 0.00 40.44 2.44
655 656 4.287067 AGAGAGTTTAGCCATGACTCCAAA 59.713 41.667 7.65 0.00 40.44 3.28
656 657 3.840666 AGAGAGTTTAGCCATGACTCCAA 59.159 43.478 7.65 0.00 40.44 3.53
657 658 3.196469 CAGAGAGTTTAGCCATGACTCCA 59.804 47.826 7.65 0.00 40.44 3.86
658 659 3.196685 ACAGAGAGTTTAGCCATGACTCC 59.803 47.826 7.65 1.55 40.44 3.85
659 660 4.159506 AGACAGAGAGTTTAGCCATGACTC 59.840 45.833 0.00 0.00 39.99 3.36
660 661 4.093011 AGACAGAGAGTTTAGCCATGACT 58.907 43.478 0.00 0.00 0.00 3.41
661 662 4.429108 GAGACAGAGAGTTTAGCCATGAC 58.571 47.826 0.00 0.00 0.00 3.06
662 663 3.129462 CGAGACAGAGAGTTTAGCCATGA 59.871 47.826 0.00 0.00 0.00 3.07
663 664 3.119316 ACGAGACAGAGAGTTTAGCCATG 60.119 47.826 0.00 0.00 0.00 3.66
664 665 3.093057 ACGAGACAGAGAGTTTAGCCAT 58.907 45.455 0.00 0.00 0.00 4.40
665 666 2.515854 ACGAGACAGAGAGTTTAGCCA 58.484 47.619 0.00 0.00 0.00 4.75
666 667 3.485546 CGTACGAGACAGAGAGTTTAGCC 60.486 52.174 10.44 0.00 0.00 3.93
667 668 3.672310 CGTACGAGACAGAGAGTTTAGC 58.328 50.000 10.44 0.00 0.00 3.09
668 669 3.485546 GGCGTACGAGACAGAGAGTTTAG 60.486 52.174 21.65 0.00 0.00 1.85
669 670 2.417933 GGCGTACGAGACAGAGAGTTTA 59.582 50.000 21.65 0.00 0.00 2.01
670 671 1.199558 GGCGTACGAGACAGAGAGTTT 59.800 52.381 21.65 0.00 0.00 2.66
671 672 0.803740 GGCGTACGAGACAGAGAGTT 59.196 55.000 21.65 0.00 0.00 3.01
672 673 2.469058 GGCGTACGAGACAGAGAGT 58.531 57.895 21.65 0.00 0.00 3.24
684 685 4.832608 CTCTTGGGGGCGGCGTAC 62.833 72.222 9.37 1.33 0.00 3.67
689 690 4.148825 CTCGTCTCTTGGGGGCGG 62.149 72.222 0.00 0.00 0.00 6.13
690 691 3.358076 GACTCGTCTCTTGGGGGCG 62.358 68.421 0.00 0.00 0.00 6.13
691 692 2.579738 GACTCGTCTCTTGGGGGC 59.420 66.667 0.00 0.00 0.00 5.80
692 693 2.711922 CGGACTCGTCTCTTGGGGG 61.712 68.421 0.00 0.00 0.00 5.40
693 694 2.885861 CGGACTCGTCTCTTGGGG 59.114 66.667 0.00 0.00 0.00 4.96
694 695 2.182030 GCGGACTCGTCTCTTGGG 59.818 66.667 0.00 0.00 38.89 4.12
695 696 2.202492 CGCGGACTCGTCTCTTGG 60.202 66.667 0.00 0.00 38.89 3.61
696 697 0.663568 AAACGCGGACTCGTCTCTTG 60.664 55.000 12.47 0.00 42.46 3.02
697 698 0.663568 CAAACGCGGACTCGTCTCTT 60.664 55.000 12.47 0.00 42.46 2.85
698 699 1.081376 CAAACGCGGACTCGTCTCT 60.081 57.895 12.47 0.00 42.46 3.10
699 700 2.087009 CCAAACGCGGACTCGTCTC 61.087 63.158 12.47 0.00 42.46 3.36
700 701 2.049433 CCAAACGCGGACTCGTCT 60.049 61.111 12.47 0.00 42.46 4.18
701 702 2.049802 TCCAAACGCGGACTCGTC 60.050 61.111 12.47 0.00 42.46 4.20
702 703 2.049433 CTCCAAACGCGGACTCGT 60.049 61.111 12.47 0.00 45.58 4.18
703 704 2.809601 CCTCCAAACGCGGACTCG 60.810 66.667 12.47 0.00 39.81 4.18
704 705 2.434359 CCCTCCAAACGCGGACTC 60.434 66.667 12.47 0.00 0.00 3.36
705 706 2.920912 TCCCTCCAAACGCGGACT 60.921 61.111 12.47 0.00 0.00 3.85
706 707 2.434359 CTCCCTCCAAACGCGGAC 60.434 66.667 12.47 0.00 0.00 4.79
707 708 4.388499 GCTCCCTCCAAACGCGGA 62.388 66.667 12.47 0.00 0.00 5.54
708 709 4.697756 TGCTCCCTCCAAACGCGG 62.698 66.667 12.47 0.00 0.00 6.46
709 710 2.668212 TTGCTCCCTCCAAACGCG 60.668 61.111 3.53 3.53 0.00 6.01
710 711 1.600916 AGTTGCTCCCTCCAAACGC 60.601 57.895 0.00 0.00 0.00 4.84
711 712 0.535102 ACAGTTGCTCCCTCCAAACG 60.535 55.000 0.00 0.00 0.00 3.60
712 713 0.954452 CACAGTTGCTCCCTCCAAAC 59.046 55.000 0.00 0.00 0.00 2.93
713 714 0.550914 ACACAGTTGCTCCCTCCAAA 59.449 50.000 0.00 0.00 0.00 3.28
714 715 1.429930 TACACAGTTGCTCCCTCCAA 58.570 50.000 0.00 0.00 0.00 3.53
715 716 1.278985 CATACACAGTTGCTCCCTCCA 59.721 52.381 0.00 0.00 0.00 3.86
716 717 1.407437 CCATACACAGTTGCTCCCTCC 60.407 57.143 0.00 0.00 0.00 4.30
717 718 1.555075 TCCATACACAGTTGCTCCCTC 59.445 52.381 0.00 0.00 0.00 4.30
718 719 1.656587 TCCATACACAGTTGCTCCCT 58.343 50.000 0.00 0.00 0.00 4.20
719 720 2.171448 AGATCCATACACAGTTGCTCCC 59.829 50.000 0.00 0.00 0.00 4.30
720 721 3.201290 CAGATCCATACACAGTTGCTCC 58.799 50.000 0.00 0.00 0.00 4.70
721 722 3.866651 ACAGATCCATACACAGTTGCTC 58.133 45.455 0.00 0.00 0.00 4.26
722 723 3.988976 ACAGATCCATACACAGTTGCT 57.011 42.857 0.00 0.00 0.00 3.91
723 724 5.464722 CAGATACAGATCCATACACAGTTGC 59.535 44.000 0.00 0.00 31.81 4.17
724 725 6.577103 ACAGATACAGATCCATACACAGTTG 58.423 40.000 0.00 0.00 31.81 3.16
725 726 6.798427 ACAGATACAGATCCATACACAGTT 57.202 37.500 0.00 0.00 31.81 3.16
726 727 6.798427 AACAGATACAGATCCATACACAGT 57.202 37.500 0.00 0.00 31.81 3.55
727 728 9.770097 AAATAACAGATACAGATCCATACACAG 57.230 33.333 0.00 0.00 31.81 3.66
728 729 9.546428 CAAATAACAGATACAGATCCATACACA 57.454 33.333 0.00 0.00 31.81 3.72
729 730 9.764363 TCAAATAACAGATACAGATCCATACAC 57.236 33.333 0.00 0.00 31.81 2.90
730 731 9.987272 CTCAAATAACAGATACAGATCCATACA 57.013 33.333 0.00 0.00 31.81 2.29
731 732 8.930760 GCTCAAATAACAGATACAGATCCATAC 58.069 37.037 0.00 0.00 31.81 2.39
732 733 7.814587 CGCTCAAATAACAGATACAGATCCATA 59.185 37.037 0.00 0.00 31.81 2.74
733 734 6.648310 CGCTCAAATAACAGATACAGATCCAT 59.352 38.462 0.00 0.00 31.81 3.41
734 735 5.985530 CGCTCAAATAACAGATACAGATCCA 59.014 40.000 0.00 0.00 31.81 3.41
735 736 5.986135 ACGCTCAAATAACAGATACAGATCC 59.014 40.000 0.00 0.00 31.81 3.36
736 737 7.470289 AACGCTCAAATAACAGATACAGATC 57.530 36.000 0.00 0.00 0.00 2.75
737 738 7.849804 AAACGCTCAAATAACAGATACAGAT 57.150 32.000 0.00 0.00 0.00 2.90
738 739 7.386573 TCAAAACGCTCAAATAACAGATACAGA 59.613 33.333 0.00 0.00 0.00 3.41
739 740 7.478667 GTCAAAACGCTCAAATAACAGATACAG 59.521 37.037 0.00 0.00 0.00 2.74
740 741 7.295201 GTCAAAACGCTCAAATAACAGATACA 58.705 34.615 0.00 0.00 0.00 2.29
741 742 6.461698 CGTCAAAACGCTCAAATAACAGATAC 59.538 38.462 0.00 0.00 42.82 2.24
742 743 6.530567 CGTCAAAACGCTCAAATAACAGATA 58.469 36.000 0.00 0.00 42.82 1.98
743 744 5.382303 CGTCAAAACGCTCAAATAACAGAT 58.618 37.500 0.00 0.00 42.82 2.90
744 745 4.768145 CGTCAAAACGCTCAAATAACAGA 58.232 39.130 0.00 0.00 42.82 3.41
758 759 2.138596 TAGTCGTGTCCCGTCAAAAC 57.861 50.000 0.00 0.00 37.94 2.43
759 760 3.006110 AGAATAGTCGTGTCCCGTCAAAA 59.994 43.478 0.00 0.00 37.94 2.44
760 761 2.559668 AGAATAGTCGTGTCCCGTCAAA 59.440 45.455 0.00 0.00 37.94 2.69
761 762 2.165167 AGAATAGTCGTGTCCCGTCAA 58.835 47.619 0.00 0.00 37.94 3.18
762 763 1.830279 AGAATAGTCGTGTCCCGTCA 58.170 50.000 0.00 0.00 37.94 4.35
763 764 2.935481 AAGAATAGTCGTGTCCCGTC 57.065 50.000 0.00 0.00 37.94 4.79
764 765 2.098770 GCTAAGAATAGTCGTGTCCCGT 59.901 50.000 0.00 0.00 37.94 5.28
765 766 2.358267 AGCTAAGAATAGTCGTGTCCCG 59.642 50.000 0.00 0.00 38.13 5.14
766 767 3.380637 TGAGCTAAGAATAGTCGTGTCCC 59.619 47.826 0.00 0.00 0.00 4.46
767 768 4.634184 TGAGCTAAGAATAGTCGTGTCC 57.366 45.455 0.00 0.00 0.00 4.02
768 769 4.501198 GCTTGAGCTAAGAATAGTCGTGTC 59.499 45.833 7.00 0.00 38.76 3.67
769 770 4.425520 GCTTGAGCTAAGAATAGTCGTGT 58.574 43.478 7.00 0.00 38.76 4.49
790 791 7.313951 ACTGTTCATTAGAGCTTATTTGAGC 57.686 36.000 0.00 0.00 43.02 4.26
871 872 2.119457 GACGACGTACGACAAAAACCT 58.881 47.619 24.41 0.00 45.77 3.50
877 878 0.510790 TTAGCGACGACGTACGACAA 59.489 50.000 24.41 1.89 45.77 3.18
1233 1287 4.590553 TGGCTGGTGGAGGTCCCA 62.591 66.667 0.00 0.00 44.25 4.37
1751 1809 2.039084 CCATGGCCAAGACTATACTCCC 59.961 54.545 10.96 0.00 0.00 4.30
1914 1996 3.000819 TCCACCGGCACCTTCGAT 61.001 61.111 0.00 0.00 0.00 3.59
2163 2245 5.182001 CCTCTTCCTTCGTTGTTGAATCAAT 59.818 40.000 0.00 0.00 0.00 2.57
2357 2443 7.277539 GCAGGACTATGACTTTGCATATCTATC 59.722 40.741 0.00 0.00 30.90 2.08
2996 3188 9.090103 CATACTCCCTCTAACAAATATAGGACA 57.910 37.037 0.00 0.00 31.05 4.02
3164 3360 1.545582 CCCAAACATTTGCTCGGTGAT 59.454 47.619 0.00 0.00 36.86 3.06
4030 6305 3.458163 CCAGCGCCCCTTCGTCTA 61.458 66.667 2.29 0.00 0.00 2.59
4138 6419 0.321475 GAAGAAGAGCAGCAGCCAGT 60.321 55.000 0.00 0.00 43.56 4.00
4227 6508 0.606604 GGTACAGAAGTCGAGGGCAA 59.393 55.000 0.00 0.00 0.00 4.52
4239 6520 3.432378 GTTGGAGAAGGAGAGGTACAGA 58.568 50.000 0.00 0.00 0.00 3.41
4461 6743 4.298103 AGGCTTCTTCATCATTGTCTGT 57.702 40.909 0.00 0.00 0.00 3.41
4612 6894 9.483489 TCAATACCAACTAAAGTACTCCTGATA 57.517 33.333 0.00 0.00 0.00 2.15
4914 7391 4.264253 CCATCTTGCAATAGTGACTTCCA 58.736 43.478 0.00 0.00 0.00 3.53
5259 7748 4.662145 AGAACGAAAAAGAACACTTGCAG 58.338 39.130 0.00 0.00 0.00 4.41
5666 8156 3.210227 TCTGAGGCGATGTCAAAAACAA 58.790 40.909 0.00 0.00 42.37 2.83
6145 8638 3.254166 CCTCTTTGGAGTCCACAATTGTG 59.746 47.826 28.18 28.18 40.38 3.33
6222 8715 9.611284 TCAATGTCTTAGAAATCGACAAAATTG 57.389 29.630 0.00 0.00 40.61 2.32
6284 8777 9.643693 AGTTCAAATGACATGACAAATTAATCC 57.356 29.630 0.00 0.00 0.00 3.01
6310 8803 5.406649 GTGATGTCACAAAAAGGTTGTTCA 58.593 37.500 8.22 0.00 45.75 3.18
6771 9471 2.897207 CCGATGGCACCCTCGTTA 59.103 61.111 12.41 0.00 33.11 3.18
7079 9926 7.230849 AGATGATCTACATGGCTTCTTCTAG 57.769 40.000 0.00 0.00 39.56 2.43
7314 10182 1.764054 CTTCCCCCTCCATCTCGCT 60.764 63.158 0.00 0.00 0.00 4.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.