Multiple sequence alignment - TraesCS2B01G430700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G430700 chr2B 100.000 4186 0 0 1 4186 619679482 619683667 0.000000e+00 7731
1 TraesCS2B01G430700 chr2D 93.522 1945 89 9 1 1928 524105375 524107299 0.000000e+00 2859
2 TraesCS2B01G430700 chr2D 85.537 1936 148 73 2009 3878 524107309 524109178 0.000000e+00 1903
3 TraesCS2B01G430700 chr2D 84.242 165 19 2 4021 4179 450983371 450983208 2.020000e-33 154
4 TraesCS2B01G430700 chr2A 92.986 1939 87 23 1 1928 669749673 669751573 0.000000e+00 2782
5 TraesCS2B01G430700 chr2A 90.470 1427 104 19 2462 3867 669752280 669753695 0.000000e+00 1853
6 TraesCS2B01G430700 chr2A 84.634 410 41 13 2020 2426 669751594 669751984 5.080000e-104 388
7 TraesCS2B01G430700 chr5A 90.683 161 15 0 3052 3212 621219971 621220131 9.110000e-52 215
8 TraesCS2B01G430700 chr7A 93.671 79 2 1 1925 2000 28155543 28155621 9.510000e-22 115
9 TraesCS2B01G430700 chr7B 95.714 70 2 1 1931 1999 457244586 457244655 1.230000e-20 111
10 TraesCS2B01G430700 chrUn 95.652 69 2 1 1931 1999 134257779 134257846 4.420000e-20 110
11 TraesCS2B01G430700 chrUn 93.056 72 5 0 1931 2002 27021834 27021763 5.720000e-19 106
12 TraesCS2B01G430700 chr1D 92.308 78 5 1 1923 2000 225863943 225864019 4.420000e-20 110
13 TraesCS2B01G430700 chr1D 93.333 75 3 2 1931 2003 492364852 492364778 4.420000e-20 110
14 TraesCS2B01G430700 chr6D 93.333 75 1 2 1931 2001 10465977 10466051 1.590000e-19 108
15 TraesCS2B01G430700 chr6D 89.412 85 3 3 1921 1999 187255435 187255519 7.400000e-18 102
16 TraesCS2B01G430700 chr1B 92.308 78 3 1 1924 2001 642043798 642043872 1.590000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G430700 chr2B 619679482 619683667 4185 False 7731.000000 7731 100.000000 1 4186 1 chr2B.!!$F1 4185
1 TraesCS2B01G430700 chr2D 524105375 524109178 3803 False 2381.000000 2859 89.529500 1 3878 2 chr2D.!!$F1 3877
2 TraesCS2B01G430700 chr2A 669749673 669753695 4022 False 1674.333333 2782 89.363333 1 3867 3 chr2A.!!$F1 3866

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
135 148 0.178961 GTTTTCCCCTTCCACAGCCT 60.179 55.0 0.00 0.00 0.00 4.58 F
1164 1203 0.603569 AAGTCGTCGATGGACTGCTT 59.396 50.0 18.98 7.04 43.66 3.91 F
1730 1772 0.238289 CTTTTGCACGAGTCGGCATT 59.762 50.0 23.20 0.00 40.17 3.56 F
2601 2908 0.035152 AGCATTCGAATGTGCCCTCA 60.035 50.0 32.52 0.00 42.20 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1479 1518 0.683412 GAGTTGTGGGTTACCTCGGT 59.317 55.0 0.0 0.00 37.76 4.69 R
2583 2890 0.099436 GTGAGGGCACATTCGAATGC 59.901 55.0 32.7 23.58 44.51 3.56 R
2947 3260 0.169009 GCACCTGCGAAACCAGAATC 59.831 55.0 0.0 0.00 34.77 2.52 R
4054 4398 0.118346 TACTCTTTGGCCCCCTCAGA 59.882 55.0 0.0 0.00 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 1.003580 TGCTCCTTCTTCCTTGCGAAT 59.996 47.619 0.00 0.00 0.00 3.34
129 142 2.235016 CGATTGTGTTTTCCCCTTCCA 58.765 47.619 0.00 0.00 0.00 3.53
135 148 0.178961 GTTTTCCCCTTCCACAGCCT 60.179 55.000 0.00 0.00 0.00 4.58
139 152 1.681229 TCCCCTTCCACAGCCTATTT 58.319 50.000 0.00 0.00 0.00 1.40
176 189 6.986817 TGAAGAATCTATTGTCTCGAATTCCC 59.013 38.462 0.00 0.00 0.00 3.97
225 238 1.745232 TTAACATGGGTTAGGCGCAG 58.255 50.000 10.83 0.00 43.40 5.18
277 290 8.207350 TCTATTAGAAGGGATCATCGGAATTT 57.793 34.615 0.00 0.00 0.00 1.82
345 358 4.946784 ATTTCGAATCTGTGGTGTAAGC 57.053 40.909 0.00 0.00 0.00 3.09
439 463 6.791887 TGTTTTCATGATCTTCTGAGTCAC 57.208 37.500 0.00 0.00 0.00 3.67
543 567 5.408299 TGACGTTTTTAGATCAGTGACATGG 59.592 40.000 0.00 0.00 0.00 3.66
544 568 5.547465 ACGTTTTTAGATCAGTGACATGGA 58.453 37.500 0.00 0.00 0.00 3.41
545 569 5.408604 ACGTTTTTAGATCAGTGACATGGAC 59.591 40.000 0.00 0.00 0.00 4.02
671 698 1.668793 CACATGCGCTCTCACACCA 60.669 57.895 9.73 0.00 0.00 4.17
920 947 2.302157 AGTTAACAGAACCCCTTCTCCG 59.698 50.000 8.61 0.00 34.20 4.63
931 958 2.024414 CCCTTCTCCGCCTAATTTTGG 58.976 52.381 0.00 0.00 0.00 3.28
934 961 3.610911 CTTCTCCGCCTAATTTTGGTCT 58.389 45.455 0.00 0.00 0.00 3.85
1013 1052 1.512996 CCTGCCATGTCGGATCATGC 61.513 60.000 12.27 9.59 42.44 4.06
1164 1203 0.603569 AAGTCGTCGATGGACTGCTT 59.396 50.000 18.98 7.04 43.66 3.91
1211 1250 5.011329 CCCATATAAAGCCATCTGTGCATTT 59.989 40.000 0.00 0.00 0.00 2.32
1281 1320 8.055181 TGGCTGGTAAGATCAATATTTCTTTCT 58.945 33.333 7.52 0.00 34.22 2.52
1315 1354 4.697352 GTCTAGTTGGTGTCTCATGCAAAT 59.303 41.667 0.00 0.00 0.00 2.32
1436 1475 1.262417 TTCTGGACTATGACGGCACA 58.738 50.000 0.00 0.00 0.00 4.57
1479 1518 0.389817 CGAGAAGGCGTTCATGTCCA 60.390 55.000 20.38 0.00 34.82 4.02
1481 1520 0.321653 AGAAGGCGTTCATGTCCACC 60.322 55.000 20.38 0.00 34.82 4.61
1584 1624 3.122297 TGAAAAATTGCTTGACGCCTTG 58.878 40.909 0.00 0.00 38.05 3.61
1592 1632 2.009774 GCTTGACGCCTTGATGTATGT 58.990 47.619 0.00 0.00 0.00 2.29
1593 1633 3.194861 GCTTGACGCCTTGATGTATGTA 58.805 45.455 0.00 0.00 0.00 2.29
1622 1664 5.136828 TGGTTGCTCAATCTGGAAAACTTA 58.863 37.500 0.00 0.00 0.00 2.24
1652 1694 2.068519 CGTGCTGCTGTGAAGAATGTA 58.931 47.619 0.00 0.00 0.00 2.29
1653 1695 2.674852 CGTGCTGCTGTGAAGAATGTAT 59.325 45.455 0.00 0.00 0.00 2.29
1655 1697 3.064545 GTGCTGCTGTGAAGAATGTATCC 59.935 47.826 0.00 0.00 0.00 2.59
1676 1718 3.600388 CAAGTTCTTCCCTACAGCGATT 58.400 45.455 0.00 0.00 0.00 3.34
1680 1722 1.134367 TCTTCCCTACAGCGATTGTCG 59.866 52.381 0.00 0.00 43.89 4.35
1730 1772 0.238289 CTTTTGCACGAGTCGGCATT 59.762 50.000 23.20 0.00 40.17 3.56
1732 1774 0.665835 TTTGCACGAGTCGGCATTTT 59.334 45.000 23.20 0.00 40.17 1.82
1747 1789 7.033185 GTCGGCATTTTACTGTTGGAATAATT 58.967 34.615 0.00 0.00 0.00 1.40
1791 1833 2.307098 AGCTAATGTGTTCTCCTTGCCT 59.693 45.455 0.00 0.00 0.00 4.75
1885 1927 7.937942 ACATAATGCTATCTTCTGCAGATTCTT 59.062 33.333 19.04 5.76 39.47 2.52
1886 1928 6.864360 AATGCTATCTTCTGCAGATTCTTC 57.136 37.500 19.04 6.36 39.47 2.87
1887 1929 5.611128 TGCTATCTTCTGCAGATTCTTCT 57.389 39.130 19.04 2.32 39.47 2.85
1888 1930 6.721704 TGCTATCTTCTGCAGATTCTTCTA 57.278 37.500 19.04 0.00 39.47 2.10
1912 1954 9.869844 CTAAAAGTAAAACAGAAGATGTGAGTG 57.130 33.333 0.00 0.00 43.00 3.51
1921 1963 4.753610 CAGAAGATGTGAGTGCTTCTTTCA 59.246 41.667 0.00 0.00 44.22 2.69
1923 1965 6.002704 AGAAGATGTGAGTGCTTCTTTCATT 58.997 36.000 0.00 0.00 44.22 2.57
1928 1970 5.342433 TGTGAGTGCTTCTTTCATTGTTTG 58.658 37.500 0.00 0.00 0.00 2.93
1930 1972 4.098349 TGAGTGCTTCTTTCATTGTTTGCT 59.902 37.500 0.00 0.00 0.00 3.91
1932 1974 5.523369 AGTGCTTCTTTCATTGTTTGCTAC 58.477 37.500 0.00 0.00 0.00 3.58
1933 1975 5.300286 AGTGCTTCTTTCATTGTTTGCTACT 59.700 36.000 0.00 0.00 0.00 2.57
1934 1976 5.979517 GTGCTTCTTTCATTGTTTGCTACTT 59.020 36.000 0.00 0.00 0.00 2.24
1935 1977 6.142958 GTGCTTCTTTCATTGTTTGCTACTTC 59.857 38.462 0.00 0.00 0.00 3.01
1936 1978 5.631096 GCTTCTTTCATTGTTTGCTACTTCC 59.369 40.000 0.00 0.00 0.00 3.46
1937 1979 6.515696 GCTTCTTTCATTGTTTGCTACTTCCT 60.516 38.462 0.00 0.00 0.00 3.36
1938 1980 6.560253 TCTTTCATTGTTTGCTACTTCCTC 57.440 37.500 0.00 0.00 0.00 3.71
1939 1981 5.473504 TCTTTCATTGTTTGCTACTTCCTCC 59.526 40.000 0.00 0.00 0.00 4.30
1940 1982 3.334691 TCATTGTTTGCTACTTCCTCCG 58.665 45.455 0.00 0.00 0.00 4.63
1941 1983 2.922740 TTGTTTGCTACTTCCTCCGT 57.077 45.000 0.00 0.00 0.00 4.69
1942 1984 4.020928 TCATTGTTTGCTACTTCCTCCGTA 60.021 41.667 0.00 0.00 0.00 4.02
1943 1985 4.339872 TTGTTTGCTACTTCCTCCGTAA 57.660 40.909 0.00 0.00 0.00 3.18
1944 1986 4.339872 TGTTTGCTACTTCCTCCGTAAA 57.660 40.909 0.00 0.00 0.00 2.01
1945 1987 4.060205 TGTTTGCTACTTCCTCCGTAAAC 58.940 43.478 0.00 0.00 34.16 2.01
1946 1988 4.202284 TGTTTGCTACTTCCTCCGTAAACT 60.202 41.667 0.00 0.00 34.50 2.66
1947 1989 5.010922 TGTTTGCTACTTCCTCCGTAAACTA 59.989 40.000 0.00 0.00 34.50 2.24
1948 1990 5.726980 TTGCTACTTCCTCCGTAAACTAA 57.273 39.130 0.00 0.00 0.00 2.24
1949 1991 5.927281 TGCTACTTCCTCCGTAAACTAAT 57.073 39.130 0.00 0.00 0.00 1.73
1950 1992 7.408756 TTGCTACTTCCTCCGTAAACTAATA 57.591 36.000 0.00 0.00 0.00 0.98
1951 1993 7.592885 TGCTACTTCCTCCGTAAACTAATAT 57.407 36.000 0.00 0.00 0.00 1.28
1952 1994 8.696043 TGCTACTTCCTCCGTAAACTAATATA 57.304 34.615 0.00 0.00 0.00 0.86
1953 1995 9.135189 TGCTACTTCCTCCGTAAACTAATATAA 57.865 33.333 0.00 0.00 0.00 0.98
1954 1996 9.623350 GCTACTTCCTCCGTAAACTAATATAAG 57.377 37.037 0.00 0.00 0.00 1.73
1957 1999 8.358895 ACTTCCTCCGTAAACTAATATAAGAGC 58.641 37.037 0.00 0.00 0.00 4.09
1958 2000 6.906659 TCCTCCGTAAACTAATATAAGAGCG 58.093 40.000 0.00 0.00 0.00 5.03
1959 2001 6.488006 TCCTCCGTAAACTAATATAAGAGCGT 59.512 38.462 0.00 0.00 0.00 5.07
1960 2002 7.013655 TCCTCCGTAAACTAATATAAGAGCGTT 59.986 37.037 0.00 0.00 0.00 4.84
1961 2003 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
1962 2004 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
1963 2005 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
1964 2006 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
1975 2017 6.518208 AAGAGCGTTTAGATCACTAACTCT 57.482 37.500 0.00 0.00 39.26 3.24
1976 2018 6.518208 AGAGCGTTTAGATCACTAACTCTT 57.482 37.500 0.00 0.00 36.80 2.85
1977 2019 7.627298 AGAGCGTTTAGATCACTAACTCTTA 57.373 36.000 0.00 0.00 36.80 2.10
1978 2020 8.228035 AGAGCGTTTAGATCACTAACTCTTAT 57.772 34.615 0.00 0.00 36.80 1.73
1979 2021 9.339850 AGAGCGTTTAGATCACTAACTCTTATA 57.660 33.333 0.00 0.00 36.80 0.98
1997 2039 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
2003 2045 9.710818 ATATTAGTTTACAGAGGGAGTACAAGA 57.289 33.333 0.00 0.00 0.00 3.02
2004 2046 8.611051 ATTAGTTTACAGAGGGAGTACAAGAT 57.389 34.615 0.00 0.00 0.00 2.40
2005 2047 6.936968 AGTTTACAGAGGGAGTACAAGATT 57.063 37.500 0.00 0.00 0.00 2.40
2012 2054 1.835531 GGGAGTACAAGATTTCGGGGA 59.164 52.381 0.00 0.00 0.00 4.81
2014 2056 2.500504 GGAGTACAAGATTTCGGGGACT 59.499 50.000 0.00 0.00 0.00 3.85
2016 2058 2.236395 AGTACAAGATTTCGGGGACTGG 59.764 50.000 0.00 0.00 33.92 4.00
2028 2070 2.094752 CGGGGACTGGTAAATTGCTTTG 60.095 50.000 0.00 0.00 0.00 2.77
2032 2074 3.740832 GGACTGGTAAATTGCTTTGTTGC 59.259 43.478 0.00 0.00 0.00 4.17
2040 2082 3.681593 ATTGCTTTGTTGCATTGCCTA 57.318 38.095 6.12 0.00 42.96 3.93
2046 2088 5.049543 TGCTTTGTTGCATTGCCTAAAAATC 60.050 36.000 6.12 0.00 38.12 2.17
2048 2090 6.542574 TTTGTTGCATTGCCTAAAAATCTG 57.457 33.333 6.12 0.00 0.00 2.90
2066 2108 8.825667 AAAATCTGTTACGTGGCAAAAATAAT 57.174 26.923 0.00 0.00 0.00 1.28
2067 2109 7.810766 AATCTGTTACGTGGCAAAAATAATG 57.189 32.000 0.00 0.00 0.00 1.90
2071 2113 7.540400 TCTGTTACGTGGCAAAAATAATGATTG 59.460 33.333 0.00 0.00 0.00 2.67
2074 2116 8.531530 GTTACGTGGCAAAAATAATGATTGATC 58.468 33.333 0.00 0.00 0.00 2.92
2075 2117 6.866480 ACGTGGCAAAAATAATGATTGATCT 58.134 32.000 0.00 0.00 0.00 2.75
2076 2118 6.753279 ACGTGGCAAAAATAATGATTGATCTG 59.247 34.615 0.00 0.00 0.00 2.90
2092 2134 5.695851 TGATCTGTTCCTTTTTGCTCTTC 57.304 39.130 0.00 0.00 0.00 2.87
2106 2148 5.957771 TTGCTCTTCCCTGAATACTACAT 57.042 39.130 0.00 0.00 0.00 2.29
2107 2149 5.282055 TGCTCTTCCCTGAATACTACATG 57.718 43.478 0.00 0.00 0.00 3.21
2108 2150 4.101585 TGCTCTTCCCTGAATACTACATGG 59.898 45.833 0.00 0.00 0.00 3.66
2112 2157 7.256332 GCTCTTCCCTGAATACTACATGGATTA 60.256 40.741 0.00 0.00 33.52 1.75
2115 2160 9.224267 CTTCCCTGAATACTACATGGATTATTG 57.776 37.037 5.31 0.00 33.52 1.90
2119 2164 9.003658 CCTGAATACTACATGGATTATTGGTTC 57.996 37.037 5.31 0.00 0.00 3.62
2124 2169 6.357367 ACTACATGGATTATTGGTTCAGGTC 58.643 40.000 0.00 0.00 0.00 3.85
2126 2171 5.831103 ACATGGATTATTGGTTCAGGTCTT 58.169 37.500 0.00 0.00 0.00 3.01
2158 2203 8.997621 TTATTTTTCGATACTCTGCTGTACTT 57.002 30.769 0.00 0.00 0.00 2.24
2159 2204 7.907214 ATTTTTCGATACTCTGCTGTACTTT 57.093 32.000 0.00 0.00 0.00 2.66
2160 2205 6.706055 TTTTCGATACTCTGCTGTACTTTG 57.294 37.500 0.00 0.00 0.00 2.77
2163 2208 4.217767 TCGATACTCTGCTGTACTTTGTGT 59.782 41.667 0.00 0.00 0.00 3.72
2198 2243 2.602257 AACTTTTCCAACCTGCAAGC 57.398 45.000 0.00 0.00 0.00 4.01
2358 2404 2.702478 TGGAGGCCACTAGATCAATCAG 59.298 50.000 5.01 0.00 0.00 2.90
2456 2518 1.610102 GCTCTTGCCTCTCTTGCTTCA 60.610 52.381 0.00 0.00 0.00 3.02
2457 2519 2.775890 CTCTTGCCTCTCTTGCTTCAA 58.224 47.619 0.00 0.00 0.00 2.69
2458 2520 2.483491 CTCTTGCCTCTCTTGCTTCAAC 59.517 50.000 0.00 0.00 0.00 3.18
2477 2784 7.601705 TTCAACCATTCCTCTGAATTTTTCT 57.398 32.000 0.00 0.00 39.20 2.52
2478 2785 6.985117 TCAACCATTCCTCTGAATTTTTCTG 58.015 36.000 0.00 0.00 39.20 3.02
2479 2786 6.550854 TCAACCATTCCTCTGAATTTTTCTGT 59.449 34.615 0.00 0.00 39.20 3.41
2480 2787 6.581171 ACCATTCCTCTGAATTTTTCTGTC 57.419 37.500 0.00 0.00 39.20 3.51
2481 2788 5.478332 ACCATTCCTCTGAATTTTTCTGTCC 59.522 40.000 0.00 0.00 39.20 4.02
2482 2789 5.477984 CCATTCCTCTGAATTTTTCTGTCCA 59.522 40.000 0.00 0.00 39.20 4.02
2485 2792 5.308825 TCCTCTGAATTTTTCTGTCCACTC 58.691 41.667 0.00 0.00 0.00 3.51
2486 2793 5.072329 TCCTCTGAATTTTTCTGTCCACTCT 59.928 40.000 0.00 0.00 0.00 3.24
2487 2794 5.767168 CCTCTGAATTTTTCTGTCCACTCTT 59.233 40.000 0.00 0.00 0.00 2.85
2489 2796 5.765182 TCTGAATTTTTCTGTCCACTCTTCC 59.235 40.000 0.00 0.00 0.00 3.46
2490 2797 4.827284 TGAATTTTTCTGTCCACTCTTCCC 59.173 41.667 0.00 0.00 0.00 3.97
2491 2798 3.943671 TTTTTCTGTCCACTCTTCCCA 57.056 42.857 0.00 0.00 0.00 4.37
2555 2862 2.734079 GCTGAAGTCTTTTCCTCGTCTG 59.266 50.000 0.00 0.00 0.00 3.51
2583 2890 0.893447 AACCGGACGAAAGGTAGGAG 59.107 55.000 9.46 0.00 40.37 3.69
2588 2895 2.552031 GGACGAAAGGTAGGAGCATTC 58.448 52.381 0.00 0.00 0.00 2.67
2592 2899 3.118738 ACGAAAGGTAGGAGCATTCGAAT 60.119 43.478 18.98 4.39 43.99 3.34
2593 2900 3.246226 CGAAAGGTAGGAGCATTCGAATG 59.754 47.826 29.67 29.67 43.99 2.67
2594 2901 3.914426 AAGGTAGGAGCATTCGAATGT 57.086 42.857 32.52 21.84 38.65 2.71
2595 2902 3.185246 AGGTAGGAGCATTCGAATGTG 57.815 47.619 32.52 15.99 38.65 3.21
2596 2903 1.599542 GGTAGGAGCATTCGAATGTGC 59.400 52.381 32.52 24.03 41.57 4.57
2600 2907 0.659957 GAGCATTCGAATGTGCCCTC 59.340 55.000 32.52 25.95 42.20 4.30
2601 2908 0.035152 AGCATTCGAATGTGCCCTCA 60.035 50.000 32.52 0.00 42.20 3.86
2604 2911 0.327924 ATTCGAATGTGCCCTCACCA 59.672 50.000 10.50 0.00 42.46 4.17
2605 2912 0.109532 TTCGAATGTGCCCTCACCAA 59.890 50.000 0.00 0.00 42.46 3.67
2606 2913 0.321564 TCGAATGTGCCCTCACCAAG 60.322 55.000 0.00 0.00 42.46 3.61
2608 2915 0.895100 GAATGTGCCCTCACCAAGCA 60.895 55.000 0.00 0.00 42.46 3.91
2613 2920 0.178967 TGCCCTCACCAAGCATTTCA 60.179 50.000 0.00 0.00 0.00 2.69
2615 2922 1.337167 GCCCTCACCAAGCATTTCAAC 60.337 52.381 0.00 0.00 0.00 3.18
2616 2923 2.242043 CCCTCACCAAGCATTTCAACT 58.758 47.619 0.00 0.00 0.00 3.16
2619 2926 3.571401 CCTCACCAAGCATTTCAACTCTT 59.429 43.478 0.00 0.00 0.00 2.85
2623 2930 6.061441 TCACCAAGCATTTCAACTCTTTCTA 58.939 36.000 0.00 0.00 0.00 2.10
2624 2931 6.716628 TCACCAAGCATTTCAACTCTTTCTAT 59.283 34.615 0.00 0.00 0.00 1.98
2625 2932 7.025963 CACCAAGCATTTCAACTCTTTCTATC 58.974 38.462 0.00 0.00 0.00 2.08
2626 2933 6.716628 ACCAAGCATTTCAACTCTTTCTATCA 59.283 34.615 0.00 0.00 0.00 2.15
2627 2934 7.025963 CCAAGCATTTCAACTCTTTCTATCAC 58.974 38.462 0.00 0.00 0.00 3.06
2650 2960 3.681417 TGACAGAAATGTGCATCTCTTCG 59.319 43.478 0.00 0.00 0.00 3.79
2657 2967 1.737735 TGCATCTCTTCGCCGTGTG 60.738 57.895 0.00 0.00 0.00 3.82
2803 3113 2.191354 ATCGAACCGACGAAGACGCA 62.191 55.000 0.00 0.00 45.37 5.24
2821 3131 6.899114 AGACGCATTCAAGGTTTTAAACTAG 58.101 36.000 7.79 0.00 0.00 2.57
2822 3132 6.708949 AGACGCATTCAAGGTTTTAAACTAGA 59.291 34.615 7.79 1.29 0.00 2.43
2823 3133 6.899114 ACGCATTCAAGGTTTTAAACTAGAG 58.101 36.000 7.79 0.00 0.00 2.43
2824 3134 6.485648 ACGCATTCAAGGTTTTAAACTAGAGT 59.514 34.615 7.79 0.00 0.00 3.24
2825 3135 7.658575 ACGCATTCAAGGTTTTAAACTAGAGTA 59.341 33.333 7.79 0.00 0.00 2.59
2867 3180 3.385193 TCTGCTCATTTCAGTCACGAA 57.615 42.857 0.00 0.00 33.48 3.85
2887 3200 1.374560 TCCACTGAACAAACACCACG 58.625 50.000 0.00 0.00 0.00 4.94
2899 3212 4.095610 CAAACACCACGTTTCTTCTGTTC 58.904 43.478 0.00 0.00 44.78 3.18
2900 3213 3.261981 ACACCACGTTTCTTCTGTTCT 57.738 42.857 0.00 0.00 0.00 3.01
2910 3223 2.639065 TCTTCTGTTCTTTTGCCACGT 58.361 42.857 0.00 0.00 0.00 4.49
2947 3260 2.263540 CGGAACTGTGGGTACGGG 59.736 66.667 0.00 0.00 37.51 5.28
2953 3266 0.902531 ACTGTGGGTACGGGATTCTG 59.097 55.000 0.00 0.00 37.51 3.02
2959 3272 1.648504 GGTACGGGATTCTGGTTTCG 58.351 55.000 0.00 0.00 0.00 3.46
3016 3329 3.198635 TGAGAGCCCCATCTGAAGTAAAG 59.801 47.826 0.00 0.00 0.00 1.85
3018 3331 3.846588 AGAGCCCCATCTGAAGTAAAGAA 59.153 43.478 0.00 0.00 0.00 2.52
3019 3332 4.289672 AGAGCCCCATCTGAAGTAAAGAAA 59.710 41.667 0.00 0.00 0.00 2.52
3020 3333 4.998051 AGCCCCATCTGAAGTAAAGAAAA 58.002 39.130 0.00 0.00 0.00 2.29
3021 3334 4.767409 AGCCCCATCTGAAGTAAAGAAAAC 59.233 41.667 0.00 0.00 0.00 2.43
3022 3335 4.379499 GCCCCATCTGAAGTAAAGAAAACG 60.379 45.833 0.00 0.00 0.00 3.60
3023 3336 4.760204 CCCCATCTGAAGTAAAGAAAACGT 59.240 41.667 0.00 0.00 0.00 3.99
3024 3337 5.240844 CCCCATCTGAAGTAAAGAAAACGTT 59.759 40.000 0.00 0.00 0.00 3.99
3031 3344 9.498307 TCTGAAGTAAAGAAAACGTTCAATTTC 57.502 29.630 0.00 1.32 36.09 2.17
3040 3353 1.545582 ACGTTCAATTTCCATGCCTGG 59.454 47.619 0.78 0.78 44.64 4.45
3046 3359 3.903090 TCAATTTCCATGCCTGGTTTCTT 59.097 39.130 7.98 0.00 43.61 2.52
3048 3361 1.923356 TTCCATGCCTGGTTTCTTCC 58.077 50.000 7.98 0.00 43.61 3.46
3050 3363 1.428912 TCCATGCCTGGTTTCTTCCTT 59.571 47.619 7.98 0.00 43.61 3.36
3054 3367 1.202927 TGCCTGGTTTCTTCCTTCCTG 60.203 52.381 0.00 0.00 0.00 3.86
3072 3385 2.095567 CCTGTTGATTTTGCTCGGTCAG 60.096 50.000 0.00 0.00 0.00 3.51
3075 3388 3.243035 TGTTGATTTTGCTCGGTCAGTTG 60.243 43.478 0.00 0.00 0.00 3.16
3095 3410 0.174845 CTCACCGATCTGGCCGTTTA 59.825 55.000 0.00 0.00 43.94 2.01
3099 3414 1.002773 ACCGATCTGGCCGTTTAACTT 59.997 47.619 0.00 0.00 43.94 2.66
3109 3424 3.127589 GCCGTTTAACTTGCCAAATTGT 58.872 40.909 0.00 0.00 0.00 2.71
3110 3425 3.558006 GCCGTTTAACTTGCCAAATTGTT 59.442 39.130 0.00 0.00 0.00 2.83
3112 3427 5.407084 GCCGTTTAACTTGCCAAATTGTTAT 59.593 36.000 0.00 0.00 0.00 1.89
3131 3446 0.615331 TGCAGGTGATGGAGTTCCTC 59.385 55.000 0.00 0.00 36.82 3.71
3138 3453 1.762957 TGATGGAGTTCCTCGATTCCC 59.237 52.381 0.00 0.00 36.82 3.97
3155 3470 0.543749 CCCTGGTGAGATGGAAGGAC 59.456 60.000 0.00 0.00 0.00 3.85
3193 3508 7.120285 AGCCCATGATCAAGAATGATAATAACG 59.880 37.037 0.00 0.00 46.30 3.18
3399 3717 2.109128 TCCACCTTTGCCCATGAAACTA 59.891 45.455 0.00 0.00 0.00 2.24
3462 3780 3.319122 GGCTTTGGTGAAGTTTGACATCT 59.681 43.478 0.00 0.00 37.69 2.90
3490 3811 6.546428 ACTATGCAGTCCAGTGTTTATACT 57.454 37.500 0.00 0.00 0.00 2.12
3535 3856 5.392057 GCTACCCTAACTTGAAAATGACAGC 60.392 44.000 0.00 0.00 0.00 4.40
3552 3873 2.108250 ACAGCCAAACAGTAGGGACAAT 59.892 45.455 0.00 0.00 0.00 2.71
3557 3878 4.705023 GCCAAACAGTAGGGACAATACAAT 59.295 41.667 0.00 0.00 0.00 2.71
3563 3884 5.053145 CAGTAGGGACAATACAATGAGAGC 58.947 45.833 0.00 0.00 0.00 4.09
3629 3953 1.917568 AGGGAGACGGTAGAGACTCTT 59.082 52.381 10.96 0.00 0.00 2.85
3659 4001 1.338890 TGAACCGGACCACACCTCAA 61.339 55.000 9.46 0.00 0.00 3.02
3713 4055 5.658634 TGTTGTCATAGAGTAGATTCCTGCT 59.341 40.000 0.00 0.00 38.09 4.24
3761 4105 3.067106 AGCTTATGACAACACCGAACAG 58.933 45.455 0.00 0.00 0.00 3.16
3840 4184 2.320781 CCATGACCACCCTACCTCTAG 58.679 57.143 0.00 0.00 0.00 2.43
3881 4225 1.294780 CATCTAGAGCCGGATGCCC 59.705 63.158 5.05 0.00 42.71 5.36
3882 4226 1.152247 ATCTAGAGCCGGATGCCCA 60.152 57.895 5.05 0.00 42.71 5.36
3883 4227 1.476007 ATCTAGAGCCGGATGCCCAC 61.476 60.000 5.05 0.00 42.71 4.61
3884 4228 3.506059 CTAGAGCCGGATGCCCACG 62.506 68.421 5.05 0.00 42.71 4.94
3890 4234 2.896854 CGGATGCCCACGGATGTG 60.897 66.667 0.00 0.00 46.00 3.21
3891 4235 3.211963 GGATGCCCACGGATGTGC 61.212 66.667 0.00 0.00 45.04 4.57
3892 4236 3.211963 GATGCCCACGGATGTGCC 61.212 66.667 0.00 0.00 45.04 5.01
3893 4237 4.820744 ATGCCCACGGATGTGCCC 62.821 66.667 0.00 0.00 45.04 5.36
3900 4244 2.818841 CGGATGTGCCCGTGGATA 59.181 61.111 0.00 0.00 44.23 2.59
3901 4245 1.300931 CGGATGTGCCCGTGGATAG 60.301 63.158 0.00 0.00 44.23 2.08
3902 4246 1.830145 GGATGTGCCCGTGGATAGT 59.170 57.895 0.00 0.00 0.00 2.12
3903 4247 0.532862 GGATGTGCCCGTGGATAGTG 60.533 60.000 0.00 0.00 0.00 2.74
3904 4248 0.532862 GATGTGCCCGTGGATAGTGG 60.533 60.000 0.00 0.00 0.00 4.00
3905 4249 2.513897 GTGCCCGTGGATAGTGGC 60.514 66.667 0.00 0.00 44.27 5.01
3906 4250 3.792736 TGCCCGTGGATAGTGGCC 61.793 66.667 0.00 0.00 43.35 5.36
3907 4251 4.564110 GCCCGTGGATAGTGGCCC 62.564 72.222 0.00 0.00 37.94 5.80
3908 4252 3.087253 CCCGTGGATAGTGGCCCA 61.087 66.667 0.00 0.00 0.00 5.36
3909 4253 2.452064 CCCGTGGATAGTGGCCCAT 61.452 63.158 0.00 0.00 34.58 4.00
3910 4254 1.071471 CCGTGGATAGTGGCCCATC 59.929 63.158 0.00 0.00 34.58 3.51
3911 4255 1.410850 CCGTGGATAGTGGCCCATCT 61.411 60.000 0.00 0.00 34.58 2.90
3912 4256 1.338107 CGTGGATAGTGGCCCATCTA 58.662 55.000 0.00 0.59 34.58 1.98
3913 4257 1.902508 CGTGGATAGTGGCCCATCTAT 59.097 52.381 0.00 6.09 34.58 1.98
3914 4258 2.093973 CGTGGATAGTGGCCCATCTATC 60.094 54.545 21.40 21.40 40.72 2.08
3918 4262 3.445008 GATAGTGGCCCATCTATCCTCA 58.555 50.000 20.00 0.00 37.57 3.86
3919 4263 2.196742 AGTGGCCCATCTATCCTCAA 57.803 50.000 0.00 0.00 0.00 3.02
3920 4264 2.492025 AGTGGCCCATCTATCCTCAAA 58.508 47.619 0.00 0.00 0.00 2.69
3921 4265 3.059097 AGTGGCCCATCTATCCTCAAAT 58.941 45.455 0.00 0.00 0.00 2.32
3922 4266 4.242811 AGTGGCCCATCTATCCTCAAATA 58.757 43.478 0.00 0.00 0.00 1.40
3923 4267 4.665009 AGTGGCCCATCTATCCTCAAATAA 59.335 41.667 0.00 0.00 0.00 1.40
3924 4268 5.314306 AGTGGCCCATCTATCCTCAAATAAT 59.686 40.000 0.00 0.00 0.00 1.28
3925 4269 5.649831 GTGGCCCATCTATCCTCAAATAATC 59.350 44.000 0.00 0.00 0.00 1.75
3926 4270 5.553162 TGGCCCATCTATCCTCAAATAATCT 59.447 40.000 0.00 0.00 0.00 2.40
3927 4271 6.118852 GGCCCATCTATCCTCAAATAATCTC 58.881 44.000 0.00 0.00 0.00 2.75
3928 4272 6.069731 GGCCCATCTATCCTCAAATAATCTCT 60.070 42.308 0.00 0.00 0.00 3.10
3929 4273 7.401246 GCCCATCTATCCTCAAATAATCTCTT 58.599 38.462 0.00 0.00 0.00 2.85
3930 4274 7.552330 GCCCATCTATCCTCAAATAATCTCTTC 59.448 40.741 0.00 0.00 0.00 2.87
3931 4275 8.046107 CCCATCTATCCTCAAATAATCTCTTCC 58.954 40.741 0.00 0.00 0.00 3.46
3932 4276 8.600668 CCATCTATCCTCAAATAATCTCTTCCA 58.399 37.037 0.00 0.00 0.00 3.53
3933 4277 9.434420 CATCTATCCTCAAATAATCTCTTCCAC 57.566 37.037 0.00 0.00 0.00 4.02
3934 4278 8.553085 TCTATCCTCAAATAATCTCTTCCACA 57.447 34.615 0.00 0.00 0.00 4.17
3935 4279 8.992349 TCTATCCTCAAATAATCTCTTCCACAA 58.008 33.333 0.00 0.00 0.00 3.33
3936 4280 7.872113 ATCCTCAAATAATCTCTTCCACAAC 57.128 36.000 0.00 0.00 0.00 3.32
3937 4281 6.180472 TCCTCAAATAATCTCTTCCACAACC 58.820 40.000 0.00 0.00 0.00 3.77
3938 4282 5.945784 CCTCAAATAATCTCTTCCACAACCA 59.054 40.000 0.00 0.00 0.00 3.67
3939 4283 6.094603 CCTCAAATAATCTCTTCCACAACCAG 59.905 42.308 0.00 0.00 0.00 4.00
3940 4284 6.778821 TCAAATAATCTCTTCCACAACCAGA 58.221 36.000 0.00 0.00 0.00 3.86
3941 4285 7.405292 TCAAATAATCTCTTCCACAACCAGAT 58.595 34.615 0.00 0.00 0.00 2.90
3942 4286 8.548025 TCAAATAATCTCTTCCACAACCAGATA 58.452 33.333 0.00 0.00 0.00 1.98
3943 4287 9.347240 CAAATAATCTCTTCCACAACCAGATAT 57.653 33.333 0.00 0.00 0.00 1.63
3944 4288 9.566432 AAATAATCTCTTCCACAACCAGATATC 57.434 33.333 0.00 0.00 0.00 1.63
3945 4289 6.821616 AATCTCTTCCACAACCAGATATCT 57.178 37.500 0.00 0.00 0.00 1.98
3946 4290 5.860941 TCTCTTCCACAACCAGATATCTC 57.139 43.478 1.03 0.00 0.00 2.75
3947 4291 5.272402 TCTCTTCCACAACCAGATATCTCA 58.728 41.667 1.03 0.00 0.00 3.27
3948 4292 5.362143 TCTCTTCCACAACCAGATATCTCAG 59.638 44.000 1.03 0.00 0.00 3.35
3949 4293 5.026121 TCTTCCACAACCAGATATCTCAGT 58.974 41.667 1.03 0.39 0.00 3.41
3950 4294 5.485353 TCTTCCACAACCAGATATCTCAGTT 59.515 40.000 1.03 7.03 0.00 3.16
3951 4295 5.762179 TCCACAACCAGATATCTCAGTTT 57.238 39.130 12.86 5.17 0.00 2.66
3952 4296 6.867519 TCCACAACCAGATATCTCAGTTTA 57.132 37.500 12.86 0.96 0.00 2.01
3953 4297 6.878317 TCCACAACCAGATATCTCAGTTTAG 58.122 40.000 12.86 9.37 0.00 1.85
3954 4298 6.667848 TCCACAACCAGATATCTCAGTTTAGA 59.332 38.462 12.86 8.64 0.00 2.10
3955 4299 7.180229 TCCACAACCAGATATCTCAGTTTAGAA 59.820 37.037 12.86 1.24 0.00 2.10
3956 4300 7.824289 CCACAACCAGATATCTCAGTTTAGAAA 59.176 37.037 12.86 0.00 0.00 2.52
3957 4301 8.660373 CACAACCAGATATCTCAGTTTAGAAAC 58.340 37.037 12.86 0.00 39.17 2.78
3958 4302 7.824779 ACAACCAGATATCTCAGTTTAGAAACC 59.175 37.037 12.86 0.00 39.71 3.27
3959 4303 7.741554 ACCAGATATCTCAGTTTAGAAACCT 57.258 36.000 1.03 0.00 39.71 3.50
3960 4304 7.787028 ACCAGATATCTCAGTTTAGAAACCTC 58.213 38.462 1.03 0.00 39.71 3.85
3961 4305 7.400339 ACCAGATATCTCAGTTTAGAAACCTCA 59.600 37.037 1.03 0.00 39.71 3.86
3962 4306 8.260818 CCAGATATCTCAGTTTAGAAACCTCAA 58.739 37.037 1.03 0.00 39.71 3.02
3963 4307 9.658799 CAGATATCTCAGTTTAGAAACCTCAAA 57.341 33.333 1.03 0.00 39.71 2.69
3967 4311 8.924511 ATCTCAGTTTAGAAACCTCAAAATCA 57.075 30.769 1.52 0.00 39.71 2.57
3968 4312 8.924511 TCTCAGTTTAGAAACCTCAAAATCAT 57.075 30.769 1.52 0.00 39.71 2.45
3981 4325 9.941325 AACCTCAAAATCATAAAATTACATGCA 57.059 25.926 0.00 0.00 0.00 3.96
3982 4326 9.941325 ACCTCAAAATCATAAAATTACATGCAA 57.059 25.926 0.00 0.00 0.00 4.08
4001 4345 9.638239 ACATGCAACATAAAACCTAATTAAGTG 57.362 29.630 0.00 0.00 0.00 3.16
4002 4346 9.086336 CATGCAACATAAAACCTAATTAAGTGG 57.914 33.333 0.00 0.00 0.00 4.00
4003 4347 8.410673 TGCAACATAAAACCTAATTAAGTGGA 57.589 30.769 0.00 0.00 0.00 4.02
4004 4348 8.519526 TGCAACATAAAACCTAATTAAGTGGAG 58.480 33.333 0.00 0.00 0.00 3.86
4005 4349 7.488150 GCAACATAAAACCTAATTAAGTGGAGC 59.512 37.037 0.00 0.00 0.00 4.70
4006 4350 8.739972 CAACATAAAACCTAATTAAGTGGAGCT 58.260 33.333 0.00 0.00 0.00 4.09
4007 4351 8.507524 ACATAAAACCTAATTAAGTGGAGCTC 57.492 34.615 4.71 4.71 0.00 4.09
4008 4352 8.107095 ACATAAAACCTAATTAAGTGGAGCTCA 58.893 33.333 17.19 0.00 0.00 4.26
4009 4353 9.125026 CATAAAACCTAATTAAGTGGAGCTCAT 57.875 33.333 17.19 0.78 0.00 2.90
4010 4354 7.631717 AAAACCTAATTAAGTGGAGCTCATC 57.368 36.000 17.19 7.66 0.00 2.92
4011 4355 6.567602 AACCTAATTAAGTGGAGCTCATCT 57.432 37.500 17.19 9.99 0.00 2.90
4012 4356 5.923204 ACCTAATTAAGTGGAGCTCATCTG 58.077 41.667 17.19 2.22 0.00 2.90
4013 4357 5.663106 ACCTAATTAAGTGGAGCTCATCTGA 59.337 40.000 17.19 3.17 0.00 3.27
4014 4358 5.988561 CCTAATTAAGTGGAGCTCATCTGAC 59.011 44.000 17.19 3.65 0.00 3.51
4015 4359 5.690464 AATTAAGTGGAGCTCATCTGACT 57.310 39.130 17.19 5.95 0.00 3.41
4016 4360 4.727507 TTAAGTGGAGCTCATCTGACTC 57.272 45.455 17.19 0.00 0.00 3.36
4029 4373 3.606595 TCTGACTCCAGAATGCTGAAG 57.393 47.619 0.74 0.00 45.74 3.02
4030 4374 2.235650 TCTGACTCCAGAATGCTGAAGG 59.764 50.000 0.74 0.00 45.74 3.46
4031 4375 1.280133 TGACTCCAGAATGCTGAAGGG 59.720 52.381 0.74 0.00 45.17 3.95
4032 4376 0.622665 ACTCCAGAATGCTGAAGGGG 59.377 55.000 0.74 0.00 45.17 4.79
4033 4377 0.622665 CTCCAGAATGCTGAAGGGGT 59.377 55.000 0.74 0.00 45.17 4.95
4034 4378 1.839994 CTCCAGAATGCTGAAGGGGTA 59.160 52.381 0.74 0.00 45.17 3.69
4035 4379 2.239654 CTCCAGAATGCTGAAGGGGTAA 59.760 50.000 0.74 0.00 45.17 2.85
4036 4380 2.647299 TCCAGAATGCTGAAGGGGTAAA 59.353 45.455 0.74 0.00 45.17 2.01
4037 4381 2.755103 CCAGAATGCTGAAGGGGTAAAC 59.245 50.000 0.74 0.00 45.17 2.01
4038 4382 3.562176 CCAGAATGCTGAAGGGGTAAACT 60.562 47.826 0.74 0.00 45.17 2.66
4039 4383 3.441572 CAGAATGCTGAAGGGGTAAACTG 59.558 47.826 0.00 0.00 45.17 3.16
4040 4384 1.839424 ATGCTGAAGGGGTAAACTGC 58.161 50.000 0.00 0.00 0.00 4.40
4041 4385 0.476338 TGCTGAAGGGGTAAACTGCA 59.524 50.000 0.00 0.00 35.56 4.41
4042 4386 1.133637 TGCTGAAGGGGTAAACTGCAA 60.134 47.619 0.00 0.00 35.15 4.08
4043 4387 1.960689 GCTGAAGGGGTAAACTGCAAA 59.039 47.619 0.00 0.00 0.00 3.68
4044 4388 2.364002 GCTGAAGGGGTAAACTGCAAAA 59.636 45.455 0.00 0.00 0.00 2.44
4045 4389 3.181470 GCTGAAGGGGTAAACTGCAAAAA 60.181 43.478 0.00 0.00 0.00 1.94
4046 4390 4.368315 CTGAAGGGGTAAACTGCAAAAAC 58.632 43.478 0.00 0.00 0.00 2.43
4047 4391 3.769844 TGAAGGGGTAAACTGCAAAAACA 59.230 39.130 0.00 0.00 0.00 2.83
4048 4392 4.223032 TGAAGGGGTAAACTGCAAAAACAA 59.777 37.500 0.00 0.00 0.00 2.83
4049 4393 4.131649 AGGGGTAAACTGCAAAAACAAC 57.868 40.909 0.00 0.00 0.00 3.32
4050 4394 3.515901 AGGGGTAAACTGCAAAAACAACA 59.484 39.130 0.00 0.00 0.00 3.33
4051 4395 4.020128 AGGGGTAAACTGCAAAAACAACAA 60.020 37.500 0.00 0.00 0.00 2.83
4052 4396 4.878971 GGGGTAAACTGCAAAAACAACAAT 59.121 37.500 0.00 0.00 0.00 2.71
4053 4397 5.355630 GGGGTAAACTGCAAAAACAACAATT 59.644 36.000 0.00 0.00 0.00 2.32
4054 4398 6.127869 GGGGTAAACTGCAAAAACAACAATTT 60.128 34.615 0.00 0.00 0.00 1.82
4055 4399 6.964370 GGGTAAACTGCAAAAACAACAATTTC 59.036 34.615 0.00 0.00 0.00 2.17
4056 4400 7.148323 GGGTAAACTGCAAAAACAACAATTTCT 60.148 33.333 0.00 0.00 0.00 2.52
4057 4401 7.691877 GGTAAACTGCAAAAACAACAATTTCTG 59.308 33.333 0.00 0.00 0.00 3.02
4058 4402 7.432350 AAACTGCAAAAACAACAATTTCTGA 57.568 28.000 0.00 0.00 0.00 3.27
4059 4403 6.651755 ACTGCAAAAACAACAATTTCTGAG 57.348 33.333 0.00 0.00 0.00 3.35
4060 4404 5.581874 ACTGCAAAAACAACAATTTCTGAGG 59.418 36.000 0.00 0.00 0.00 3.86
4061 4405 4.874966 TGCAAAAACAACAATTTCTGAGGG 59.125 37.500 0.00 0.00 0.00 4.30
4062 4406 4.273235 GCAAAAACAACAATTTCTGAGGGG 59.727 41.667 0.00 0.00 0.00 4.79
4063 4407 4.687901 AAAACAACAATTTCTGAGGGGG 57.312 40.909 0.00 0.00 0.00 5.40
4064 4408 1.632589 ACAACAATTTCTGAGGGGGC 58.367 50.000 0.00 0.00 0.00 5.80
4065 4409 0.897621 CAACAATTTCTGAGGGGGCC 59.102 55.000 0.00 0.00 0.00 5.80
4066 4410 0.486879 AACAATTTCTGAGGGGGCCA 59.513 50.000 4.39 0.00 0.00 5.36
4067 4411 0.486879 ACAATTTCTGAGGGGGCCAA 59.513 50.000 4.39 0.00 0.00 4.52
4068 4412 1.132881 ACAATTTCTGAGGGGGCCAAA 60.133 47.619 4.39 0.00 0.00 3.28
4069 4413 1.551883 CAATTTCTGAGGGGGCCAAAG 59.448 52.381 4.39 0.00 0.00 2.77
4070 4414 1.084018 ATTTCTGAGGGGGCCAAAGA 58.916 50.000 4.39 0.00 0.00 2.52
4071 4415 0.405585 TTTCTGAGGGGGCCAAAGAG 59.594 55.000 4.39 0.00 0.00 2.85
4072 4416 0.772124 TTCTGAGGGGGCCAAAGAGT 60.772 55.000 4.39 0.00 0.00 3.24
4073 4417 0.118346 TCTGAGGGGGCCAAAGAGTA 59.882 55.000 4.39 0.00 0.00 2.59
4074 4418 1.216990 CTGAGGGGGCCAAAGAGTAT 58.783 55.000 4.39 0.00 0.00 2.12
4075 4419 2.022428 TCTGAGGGGGCCAAAGAGTATA 60.022 50.000 4.39 0.00 0.00 1.47
4076 4420 2.104963 CTGAGGGGGCCAAAGAGTATAC 59.895 54.545 4.39 0.00 0.00 1.47
4077 4421 2.293586 TGAGGGGGCCAAAGAGTATACT 60.294 50.000 4.68 4.68 0.00 2.12
4078 4422 2.778270 GAGGGGGCCAAAGAGTATACTT 59.222 50.000 6.88 0.00 0.00 2.24
4079 4423 3.198827 AGGGGGCCAAAGAGTATACTTT 58.801 45.455 6.88 0.00 40.16 2.66
4099 4443 9.953697 ATACTTTGTTTAATTAAGCACAACGAA 57.046 25.926 18.67 10.73 0.00 3.85
4100 4444 8.690680 ACTTTGTTTAATTAAGCACAACGAAA 57.309 26.923 18.67 9.10 0.00 3.46
4101 4445 8.803799 ACTTTGTTTAATTAAGCACAACGAAAG 58.196 29.630 18.67 16.81 0.00 2.62
4102 4446 6.741448 TGTTTAATTAAGCACAACGAAAGC 57.259 33.333 10.34 0.00 0.00 3.51
4103 4447 6.266323 TGTTTAATTAAGCACAACGAAAGCA 58.734 32.000 10.34 0.00 0.00 3.91
4104 4448 6.752351 TGTTTAATTAAGCACAACGAAAGCAA 59.248 30.769 10.34 0.00 0.00 3.91
4105 4449 7.275779 TGTTTAATTAAGCACAACGAAAGCAAA 59.724 29.630 10.34 0.00 0.00 3.68
4106 4450 7.938563 TTAATTAAGCACAACGAAAGCAAAT 57.061 28.000 0.00 0.00 0.00 2.32
4107 4451 6.843069 AATTAAGCACAACGAAAGCAAATT 57.157 29.167 0.00 0.00 0.00 1.82
4108 4452 6.843069 ATTAAGCACAACGAAAGCAAATTT 57.157 29.167 0.00 0.00 0.00 1.82
4109 4453 4.777140 AAGCACAACGAAAGCAAATTTC 57.223 36.364 0.00 0.00 43.33 2.17
4110 4454 4.045636 AGCACAACGAAAGCAAATTTCT 57.954 36.364 0.00 0.00 44.39 2.52
4111 4455 4.432712 AGCACAACGAAAGCAAATTTCTT 58.567 34.783 0.00 0.00 44.39 2.52
4112 4456 4.268405 AGCACAACGAAAGCAAATTTCTTG 59.732 37.500 0.00 5.38 44.39 3.02
4113 4457 4.267452 GCACAACGAAAGCAAATTTCTTGA 59.733 37.500 14.03 0.00 44.39 3.02
4114 4458 5.555069 GCACAACGAAAGCAAATTTCTTGAG 60.555 40.000 14.03 9.97 44.39 3.02
4115 4459 5.743398 CACAACGAAAGCAAATTTCTTGAGA 59.257 36.000 14.03 0.00 44.39 3.27
4116 4460 5.973565 ACAACGAAAGCAAATTTCTTGAGAG 59.026 36.000 14.03 0.00 44.39 3.20
4117 4461 6.183360 ACAACGAAAGCAAATTTCTTGAGAGA 60.183 34.615 14.03 0.00 44.39 3.10
4118 4462 6.566197 ACGAAAGCAAATTTCTTGAGAGAT 57.434 33.333 0.00 0.00 44.39 2.75
4119 4463 6.974965 ACGAAAGCAAATTTCTTGAGAGATT 58.025 32.000 0.00 0.00 44.39 2.40
4120 4464 7.428826 ACGAAAGCAAATTTCTTGAGAGATTT 58.571 30.769 4.25 4.25 44.39 2.17
4121 4465 7.922811 ACGAAAGCAAATTTCTTGAGAGATTTT 59.077 29.630 6.74 0.00 44.39 1.82
4122 4466 8.212495 CGAAAGCAAATTTCTTGAGAGATTTTG 58.788 33.333 6.74 7.15 44.39 2.44
4124 4468 6.161911 GCAAATTTCTTGAGAGATTTTGCC 57.838 37.500 17.55 5.46 44.89 4.52
4125 4469 5.697633 GCAAATTTCTTGAGAGATTTTGCCA 59.302 36.000 17.55 0.00 44.89 4.92
4126 4470 6.203338 GCAAATTTCTTGAGAGATTTTGCCAA 59.797 34.615 17.55 0.00 44.89 4.52
4127 4471 7.570691 GCAAATTTCTTGAGAGATTTTGCCAAG 60.571 37.037 17.55 0.00 44.89 3.61
4128 4472 5.458041 TTTCTTGAGAGATTTTGCCAAGG 57.542 39.130 0.00 0.00 36.01 3.61
4129 4473 4.104383 TCTTGAGAGATTTTGCCAAGGT 57.896 40.909 0.00 0.00 36.01 3.50
4130 4474 4.473444 TCTTGAGAGATTTTGCCAAGGTT 58.527 39.130 0.00 0.00 36.01 3.50
4131 4475 4.279169 TCTTGAGAGATTTTGCCAAGGTTG 59.721 41.667 0.00 0.00 36.01 3.77
4154 4498 2.903855 CCATGGCCCACGCAGATC 60.904 66.667 0.00 0.00 36.38 2.75
4155 4499 2.124612 CATGGCCCACGCAGATCA 60.125 61.111 0.00 0.00 36.38 2.92
4156 4500 1.750018 CATGGCCCACGCAGATCAA 60.750 57.895 0.00 0.00 36.38 2.57
4157 4501 1.750399 ATGGCCCACGCAGATCAAC 60.750 57.895 0.00 0.00 36.38 3.18
4158 4502 2.359850 GGCCCACGCAGATCAACA 60.360 61.111 0.00 0.00 36.38 3.33
4159 4503 1.750399 GGCCCACGCAGATCAACAT 60.750 57.895 0.00 0.00 36.38 2.71
4160 4504 1.430632 GCCCACGCAGATCAACATG 59.569 57.895 0.00 0.00 34.03 3.21
4161 4505 1.308069 GCCCACGCAGATCAACATGT 61.308 55.000 0.00 0.00 34.03 3.21
4162 4506 2.011548 GCCCACGCAGATCAACATGTA 61.012 52.381 0.00 0.00 34.03 2.29
4163 4507 1.935873 CCCACGCAGATCAACATGTAG 59.064 52.381 0.00 0.00 0.00 2.74
4164 4508 1.328680 CCACGCAGATCAACATGTAGC 59.671 52.381 0.00 0.00 0.00 3.58
4165 4509 2.274437 CACGCAGATCAACATGTAGCT 58.726 47.619 0.00 0.00 0.00 3.32
4166 4510 2.674852 CACGCAGATCAACATGTAGCTT 59.325 45.455 0.00 0.00 0.00 3.74
4167 4511 2.932614 ACGCAGATCAACATGTAGCTTC 59.067 45.455 0.00 0.00 0.00 3.86
4168 4512 2.034254 CGCAGATCAACATGTAGCTTCG 60.034 50.000 0.00 0.00 0.00 3.79
4169 4513 2.286067 GCAGATCAACATGTAGCTTCGC 60.286 50.000 0.00 0.00 0.00 4.70
4170 4514 2.034254 CAGATCAACATGTAGCTTCGCG 60.034 50.000 0.00 0.00 0.00 5.87
4171 4515 2.159240 AGATCAACATGTAGCTTCGCGA 60.159 45.455 3.71 3.71 0.00 5.87
4172 4516 1.629013 TCAACATGTAGCTTCGCGAG 58.371 50.000 9.59 4.97 0.00 5.03
4173 4517 1.067846 TCAACATGTAGCTTCGCGAGT 60.068 47.619 9.59 0.00 0.00 4.18
4174 4518 1.059692 CAACATGTAGCTTCGCGAGTG 59.940 52.381 9.59 7.92 0.00 3.51
4175 4519 0.458543 ACATGTAGCTTCGCGAGTGG 60.459 55.000 9.59 5.14 0.00 4.00
4176 4520 0.458543 CATGTAGCTTCGCGAGTGGT 60.459 55.000 9.59 14.50 0.00 4.16
4177 4521 0.246635 ATGTAGCTTCGCGAGTGGTT 59.753 50.000 18.07 9.90 0.00 3.67
4178 4522 0.666274 TGTAGCTTCGCGAGTGGTTG 60.666 55.000 18.07 4.58 0.00 3.77
4179 4523 0.666577 GTAGCTTCGCGAGTGGTTGT 60.667 55.000 18.07 0.86 0.00 3.32
4180 4524 0.666274 TAGCTTCGCGAGTGGTTGTG 60.666 55.000 18.07 1.88 0.00 3.33
4181 4525 2.954753 GCTTCGCGAGTGGTTGTGG 61.955 63.158 9.59 0.00 0.00 4.17
4182 4526 2.954753 CTTCGCGAGTGGTTGTGGC 61.955 63.158 9.59 0.00 0.00 5.01
4183 4527 4.980805 TCGCGAGTGGTTGTGGCC 62.981 66.667 3.71 0.00 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.483106 CGAAGAATAGGAGATCGGCGTA 59.517 50.000 6.85 0.00 0.00 4.42
101 102 4.142249 GGGGAAAACACAATCGGGAAATAG 60.142 45.833 0.00 0.00 0.00 1.73
129 142 4.622260 AACCAATTGCAAAATAGGCTGT 57.378 36.364 1.71 0.00 0.00 4.40
139 152 8.149647 ACAATAGATTCTTCAAACCAATTGCAA 58.850 29.630 0.00 0.00 38.98 4.08
161 174 4.235079 TGGATTGGGAATTCGAGACAAT 57.765 40.909 12.89 12.89 34.73 2.71
176 189 6.095432 ACGGAAAGAGATAGAGATGGATTG 57.905 41.667 0.00 0.00 0.00 2.67
225 238 0.463654 TTCCGATGGTAGGCATGCAC 60.464 55.000 21.36 9.99 0.00 4.57
277 290 7.458409 ACACGTGGTCTTTTACTAGATTAGA 57.542 36.000 21.57 0.00 0.00 2.10
289 302 4.712122 AATCAAACAACACGTGGTCTTT 57.288 36.364 21.57 11.10 0.00 2.52
397 414 4.156455 ACAACACCATAGATTGCCTAGG 57.844 45.455 3.67 3.67 0.00 3.02
412 429 6.963796 ACTCAGAAGATCATGAAAACAACAC 58.036 36.000 0.00 0.00 0.00 3.32
439 463 0.962356 GCCCCACATCAGTGTCCTTG 60.962 60.000 0.00 0.00 44.39 3.61
543 567 4.416620 CATGAGTCAAGGAGTAAGTCGTC 58.583 47.826 0.00 0.00 0.00 4.20
544 568 3.367498 GCATGAGTCAAGGAGTAAGTCGT 60.367 47.826 0.00 0.00 0.00 4.34
545 569 3.182967 GCATGAGTCAAGGAGTAAGTCG 58.817 50.000 0.00 0.00 0.00 4.18
671 698 2.954318 ACGGCGTACCTTCATATACACT 59.046 45.455 12.58 0.00 0.00 3.55
920 947 5.237048 TGCAAATTGAGACCAAAATTAGGC 58.763 37.500 0.00 0.00 35.67 3.93
931 958 7.483307 TGAATAGGCTAATTGCAAATTGAGAC 58.517 34.615 1.71 0.19 45.15 3.36
934 961 8.476447 TCAATGAATAGGCTAATTGCAAATTGA 58.524 29.630 1.71 6.94 45.15 2.57
1182 1221 5.771666 CACAGATGGCTTTATATGGGTTGAT 59.228 40.000 0.00 0.00 0.00 2.57
1211 1250 5.131475 TCATCAGATGGACCATCAGAATCAA 59.869 40.000 31.47 15.36 42.72 2.57
1281 1320 5.250200 ACACCAACTAGACAACTGAAAACA 58.750 37.500 0.00 0.00 0.00 2.83
1315 1354 6.899393 ACAAATGGCAAAACTCTAGAATCA 57.101 33.333 0.00 0.00 0.00 2.57
1400 1439 3.503748 CCAGAAACAAGGCGATCTTCTTT 59.496 43.478 0.00 0.00 32.41 2.52
1436 1475 4.576463 GGATCATTGACAATAGGCGAAAGT 59.424 41.667 0.00 0.00 0.00 2.66
1479 1518 0.683412 GAGTTGTGGGTTACCTCGGT 59.317 55.000 0.00 0.00 37.76 4.69
1481 1520 1.616865 TCAGAGTTGTGGGTTACCTCG 59.383 52.381 0.00 0.00 37.76 4.63
1584 1624 7.786178 TGAGCAACCAAGTTATACATACATC 57.214 36.000 0.00 0.00 0.00 3.06
1592 1632 6.061022 TCCAGATTGAGCAACCAAGTTATA 57.939 37.500 0.00 0.00 0.00 0.98
1593 1633 4.922206 TCCAGATTGAGCAACCAAGTTAT 58.078 39.130 0.00 0.00 0.00 1.89
1622 1664 1.004080 AGCAGCACGCATCTGAAGT 60.004 52.632 0.00 0.00 46.13 3.01
1652 1694 2.093447 CGCTGTAGGGAAGAACTTGGAT 60.093 50.000 0.00 0.00 0.00 3.41
1653 1695 1.275291 CGCTGTAGGGAAGAACTTGGA 59.725 52.381 0.00 0.00 0.00 3.53
1655 1697 2.743636 TCGCTGTAGGGAAGAACTTG 57.256 50.000 0.00 0.00 33.89 3.16
1724 1766 7.449934 GAATTATTCCAACAGTAAAATGCCG 57.550 36.000 0.00 0.00 0.00 5.69
1774 1816 3.181440 TGAAGAGGCAAGGAGAACACATT 60.181 43.478 0.00 0.00 0.00 2.71
1791 1833 7.390440 ACAAATTCGAACACCTGAATATGAAGA 59.610 33.333 0.00 0.00 33.85 2.87
1885 1927 9.832445 ACTCACATCTTCTGTTTTACTTTTAGA 57.168 29.630 0.00 0.00 35.29 2.10
1886 1928 9.869844 CACTCACATCTTCTGTTTTACTTTTAG 57.130 33.333 0.00 0.00 35.29 1.85
1887 1929 8.342634 GCACTCACATCTTCTGTTTTACTTTTA 58.657 33.333 0.00 0.00 35.29 1.52
1888 1930 7.067494 AGCACTCACATCTTCTGTTTTACTTTT 59.933 33.333 0.00 0.00 35.29 2.27
1912 1954 5.631096 GGAAGTAGCAAACAATGAAAGAAGC 59.369 40.000 0.00 0.00 0.00 3.86
1921 1963 3.418684 ACGGAGGAAGTAGCAAACAAT 57.581 42.857 0.00 0.00 0.00 2.71
1923 1965 4.060205 GTTTACGGAGGAAGTAGCAAACA 58.940 43.478 0.00 0.00 0.00 2.83
1928 1970 9.623350 CTTATATTAGTTTACGGAGGAAGTAGC 57.377 37.037 0.00 0.00 0.00 3.58
1932 1974 7.537991 CGCTCTTATATTAGTTTACGGAGGAAG 59.462 40.741 0.00 0.00 0.00 3.46
1933 1975 7.013655 ACGCTCTTATATTAGTTTACGGAGGAA 59.986 37.037 0.00 0.00 0.00 3.36
1934 1976 6.488006 ACGCTCTTATATTAGTTTACGGAGGA 59.512 38.462 0.00 0.00 0.00 3.71
1935 1977 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
1936 1978 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
1937 1979 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
1938 1980 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
1949 1991 9.339850 AGAGTTAGTGATCTAAACGCTCTTATA 57.660 33.333 0.00 0.00 35.50 0.98
1950 1992 8.228035 AGAGTTAGTGATCTAAACGCTCTTAT 57.772 34.615 0.00 0.00 35.50 1.73
1951 1993 7.627298 AGAGTTAGTGATCTAAACGCTCTTA 57.373 36.000 0.00 0.00 35.50 2.10
1952 1994 6.518208 AGAGTTAGTGATCTAAACGCTCTT 57.482 37.500 0.00 0.00 35.50 2.85
1953 1995 6.518208 AAGAGTTAGTGATCTAAACGCTCT 57.482 37.500 10.33 6.39 38.05 4.09
1971 2013 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
1977 2019 9.710818 TCTTGTACTCCCTCTGTAAACTAATAT 57.289 33.333 0.00 0.00 0.00 1.28
1978 2020 9.710818 ATCTTGTACTCCCTCTGTAAACTAATA 57.289 33.333 0.00 0.00 0.00 0.98
1979 2021 8.611051 ATCTTGTACTCCCTCTGTAAACTAAT 57.389 34.615 0.00 0.00 0.00 1.73
1980 2022 8.431910 AATCTTGTACTCCCTCTGTAAACTAA 57.568 34.615 0.00 0.00 0.00 2.24
1981 2023 8.431910 AAATCTTGTACTCCCTCTGTAAACTA 57.568 34.615 0.00 0.00 0.00 2.24
1982 2024 6.936968 AATCTTGTACTCCCTCTGTAAACT 57.063 37.500 0.00 0.00 0.00 2.66
1983 2025 6.310711 CGAAATCTTGTACTCCCTCTGTAAAC 59.689 42.308 0.00 0.00 0.00 2.01
1984 2026 6.395629 CGAAATCTTGTACTCCCTCTGTAAA 58.604 40.000 0.00 0.00 0.00 2.01
1985 2027 5.105473 CCGAAATCTTGTACTCCCTCTGTAA 60.105 44.000 0.00 0.00 0.00 2.41
1986 2028 4.401519 CCGAAATCTTGTACTCCCTCTGTA 59.598 45.833 0.00 0.00 0.00 2.74
1987 2029 3.195825 CCGAAATCTTGTACTCCCTCTGT 59.804 47.826 0.00 0.00 0.00 3.41
1988 2030 3.430929 CCCGAAATCTTGTACTCCCTCTG 60.431 52.174 0.00 0.00 0.00 3.35
1989 2031 2.766828 CCCGAAATCTTGTACTCCCTCT 59.233 50.000 0.00 0.00 0.00 3.69
1990 2032 2.158943 CCCCGAAATCTTGTACTCCCTC 60.159 54.545 0.00 0.00 0.00 4.30
1991 2033 1.838077 CCCCGAAATCTTGTACTCCCT 59.162 52.381 0.00 0.00 0.00 4.20
1992 2034 1.835531 TCCCCGAAATCTTGTACTCCC 59.164 52.381 0.00 0.00 0.00 4.30
1993 2035 2.500504 AGTCCCCGAAATCTTGTACTCC 59.499 50.000 0.00 0.00 0.00 3.85
1994 2036 3.522553 CAGTCCCCGAAATCTTGTACTC 58.477 50.000 0.00 0.00 0.00 2.59
1995 2037 2.236395 CCAGTCCCCGAAATCTTGTACT 59.764 50.000 0.00 0.00 0.00 2.73
1996 2038 2.027469 ACCAGTCCCCGAAATCTTGTAC 60.027 50.000 0.00 0.00 0.00 2.90
1997 2039 2.262637 ACCAGTCCCCGAAATCTTGTA 58.737 47.619 0.00 0.00 0.00 2.41
1998 2040 1.064825 ACCAGTCCCCGAAATCTTGT 58.935 50.000 0.00 0.00 0.00 3.16
1999 2041 3.343941 TTACCAGTCCCCGAAATCTTG 57.656 47.619 0.00 0.00 0.00 3.02
2000 2042 4.586306 ATTTACCAGTCCCCGAAATCTT 57.414 40.909 0.00 0.00 0.00 2.40
2001 2043 4.270008 CAATTTACCAGTCCCCGAAATCT 58.730 43.478 0.00 0.00 0.00 2.40
2002 2044 3.181490 GCAATTTACCAGTCCCCGAAATC 60.181 47.826 0.00 0.00 0.00 2.17
2003 2045 2.758423 GCAATTTACCAGTCCCCGAAAT 59.242 45.455 0.00 0.00 0.00 2.17
2004 2046 2.164338 GCAATTTACCAGTCCCCGAAA 58.836 47.619 0.00 0.00 0.00 3.46
2005 2047 1.353022 AGCAATTTACCAGTCCCCGAA 59.647 47.619 0.00 0.00 0.00 4.30
2012 2054 4.399004 TGCAACAAAGCAATTTACCAGT 57.601 36.364 0.00 0.00 42.46 4.00
2028 2070 6.183359 CGTAACAGATTTTTAGGCAATGCAAC 60.183 38.462 7.79 0.00 0.00 4.17
2032 2074 5.799936 CCACGTAACAGATTTTTAGGCAATG 59.200 40.000 0.00 0.00 0.00 2.82
2040 2082 8.649973 TTATTTTTGCCACGTAACAGATTTTT 57.350 26.923 0.00 0.00 0.00 1.94
2046 2088 7.540400 TCAATCATTATTTTTGCCACGTAACAG 59.460 33.333 0.00 0.00 0.00 3.16
2048 2090 7.804614 TCAATCATTATTTTTGCCACGTAAC 57.195 32.000 0.00 0.00 0.00 2.50
2066 2108 5.771666 AGAGCAAAAAGGAACAGATCAATCA 59.228 36.000 0.00 0.00 0.00 2.57
2067 2109 6.264841 AGAGCAAAAAGGAACAGATCAATC 57.735 37.500 0.00 0.00 0.00 2.67
2071 2113 4.082517 GGGAAGAGCAAAAAGGAACAGATC 60.083 45.833 0.00 0.00 0.00 2.75
2074 2116 3.005155 CAGGGAAGAGCAAAAAGGAACAG 59.995 47.826 0.00 0.00 0.00 3.16
2075 2117 2.958355 CAGGGAAGAGCAAAAAGGAACA 59.042 45.455 0.00 0.00 0.00 3.18
2076 2118 3.222603 TCAGGGAAGAGCAAAAAGGAAC 58.777 45.455 0.00 0.00 0.00 3.62
2092 2134 7.461749 ACCAATAATCCATGTAGTATTCAGGG 58.538 38.462 0.00 0.00 37.99 4.45
2106 2148 5.886609 TCAAAGACCTGAACCAATAATCCA 58.113 37.500 0.00 0.00 0.00 3.41
2107 2149 7.410120 AATCAAAGACCTGAACCAATAATCC 57.590 36.000 0.00 0.00 0.00 3.01
2137 2182 6.145534 CACAAAGTACAGCAGAGTATCGAAAA 59.854 38.462 0.00 0.00 42.67 2.29
2138 2183 5.633601 CACAAAGTACAGCAGAGTATCGAAA 59.366 40.000 0.00 0.00 42.67 3.46
2139 2184 5.161358 CACAAAGTACAGCAGAGTATCGAA 58.839 41.667 0.00 0.00 42.67 3.71
2140 2185 4.217767 ACACAAAGTACAGCAGAGTATCGA 59.782 41.667 0.00 0.00 42.67 3.59
2141 2186 4.486090 ACACAAAGTACAGCAGAGTATCG 58.514 43.478 0.00 0.00 42.67 2.92
2142 2187 6.037098 CCTACACAAAGTACAGCAGAGTATC 58.963 44.000 0.00 0.00 0.00 2.24
2143 2188 5.715279 TCCTACACAAAGTACAGCAGAGTAT 59.285 40.000 0.00 0.00 0.00 2.12
2144 2189 5.048224 GTCCTACACAAAGTACAGCAGAGTA 60.048 44.000 0.00 0.00 0.00 2.59
2145 2190 3.895656 TCCTACACAAAGTACAGCAGAGT 59.104 43.478 0.00 0.00 0.00 3.24
2146 2191 4.238514 GTCCTACACAAAGTACAGCAGAG 58.761 47.826 0.00 0.00 0.00 3.35
2147 2192 3.639561 TGTCCTACACAAAGTACAGCAGA 59.360 43.478 0.00 0.00 29.30 4.26
2148 2193 3.990092 TGTCCTACACAAAGTACAGCAG 58.010 45.455 0.00 0.00 29.30 4.24
2158 2203 3.569194 TGGCTTCTTTGTCCTACACAA 57.431 42.857 0.00 0.00 43.68 3.33
2159 2204 3.569194 TTGGCTTCTTTGTCCTACACA 57.431 42.857 0.00 0.00 0.00 3.72
2160 2205 3.883489 AGTTTGGCTTCTTTGTCCTACAC 59.117 43.478 0.00 0.00 0.00 2.90
2163 2208 5.068591 GGAAAAGTTTGGCTTCTTTGTCCTA 59.931 40.000 0.00 0.00 36.17 2.94
2198 2243 6.435430 TCAATGATCATGGGTAAAAACTCG 57.565 37.500 9.46 0.00 0.00 4.18
2240 2286 6.017440 ACACGTTGATTGCTGTAACTGTTAAT 60.017 34.615 1.10 0.00 0.00 1.40
2245 2291 3.878086 ACACGTTGATTGCTGTAACTG 57.122 42.857 0.00 0.00 0.00 3.16
2347 2393 4.209538 CATTTGCACCCCTGATTGATCTA 58.790 43.478 0.00 0.00 0.00 1.98
2358 2404 1.686052 TGTTCTCAACATTTGCACCCC 59.314 47.619 0.00 0.00 36.25 4.95
2456 2518 6.015095 GGACAGAAAAATTCAGAGGAATGGTT 60.015 38.462 0.00 0.00 42.87 3.67
2457 2519 5.478332 GGACAGAAAAATTCAGAGGAATGGT 59.522 40.000 0.00 0.00 42.87 3.55
2458 2520 5.477984 TGGACAGAAAAATTCAGAGGAATGG 59.522 40.000 0.00 0.00 42.87 3.16
2477 2784 2.040278 CTGGAAATGGGAAGAGTGGACA 59.960 50.000 0.00 0.00 0.00 4.02
2478 2785 2.619074 CCTGGAAATGGGAAGAGTGGAC 60.619 54.545 0.00 0.00 0.00 4.02
2479 2786 1.635487 CCTGGAAATGGGAAGAGTGGA 59.365 52.381 0.00 0.00 0.00 4.02
2480 2787 1.635487 TCCTGGAAATGGGAAGAGTGG 59.365 52.381 0.00 0.00 0.00 4.00
2481 2788 2.307098 AGTCCTGGAAATGGGAAGAGTG 59.693 50.000 0.00 0.00 33.01 3.51
2482 2789 2.307098 CAGTCCTGGAAATGGGAAGAGT 59.693 50.000 0.00 0.00 33.01 3.24
2505 2812 3.188786 AAGCTGCGCGACCGAATC 61.189 61.111 12.10 0.00 36.29 2.52
2526 2833 3.251004 GGAAAAGACTTCAGCACATCGTT 59.749 43.478 0.00 0.00 0.00 3.85
2555 2862 3.059393 CCTTTCGTCCGGTTGTTAGTTTC 60.059 47.826 0.00 0.00 0.00 2.78
2583 2890 0.099436 GTGAGGGCACATTCGAATGC 59.901 55.000 32.70 23.58 44.51 3.56
2588 2895 1.926511 GCTTGGTGAGGGCACATTCG 61.927 60.000 0.00 0.00 46.96 3.34
2592 2899 0.469705 AAATGCTTGGTGAGGGCACA 60.470 50.000 0.00 0.00 46.96 4.57
2593 2900 0.244721 GAAATGCTTGGTGAGGGCAC 59.755 55.000 0.00 0.00 44.39 5.01
2594 2901 0.178967 TGAAATGCTTGGTGAGGGCA 60.179 50.000 0.00 0.00 40.32 5.36
2595 2902 0.968405 TTGAAATGCTTGGTGAGGGC 59.032 50.000 0.00 0.00 0.00 5.19
2596 2903 2.229784 GAGTTGAAATGCTTGGTGAGGG 59.770 50.000 0.00 0.00 0.00 4.30
2600 2907 5.192327 AGAAAGAGTTGAAATGCTTGGTG 57.808 39.130 0.00 0.00 0.00 4.17
2601 2908 6.716628 TGATAGAAAGAGTTGAAATGCTTGGT 59.283 34.615 0.00 0.00 0.00 3.67
2604 2911 7.663081 TCAGTGATAGAAAGAGTTGAAATGCTT 59.337 33.333 0.00 0.00 0.00 3.91
2605 2912 7.118971 GTCAGTGATAGAAAGAGTTGAAATGCT 59.881 37.037 0.00 0.00 0.00 3.79
2606 2913 7.095060 TGTCAGTGATAGAAAGAGTTGAAATGC 60.095 37.037 0.00 0.00 0.00 3.56
2608 2915 8.370940 TCTGTCAGTGATAGAAAGAGTTGAAAT 58.629 33.333 16.42 0.00 27.30 2.17
2613 2920 8.153550 ACATTTCTGTCAGTGATAGAAAGAGTT 58.846 33.333 34.06 22.47 46.82 3.01
2615 2922 7.412781 GCACATTTCTGTCAGTGATAGAAAGAG 60.413 40.741 34.06 30.49 46.82 2.85
2616 2923 6.369890 GCACATTTCTGTCAGTGATAGAAAGA 59.630 38.462 34.06 21.88 46.82 2.52
2619 2926 5.550290 TGCACATTTCTGTCAGTGATAGAA 58.450 37.500 23.83 23.83 37.86 2.10
2623 2930 4.586884 AGATGCACATTTCTGTCAGTGAT 58.413 39.130 0.00 0.00 33.99 3.06
2624 2931 3.999001 GAGATGCACATTTCTGTCAGTGA 59.001 43.478 0.00 0.00 33.99 3.41
2625 2932 4.001652 AGAGATGCACATTTCTGTCAGTG 58.998 43.478 3.09 0.00 31.89 3.66
2626 2933 4.283363 AGAGATGCACATTTCTGTCAGT 57.717 40.909 3.09 0.00 31.89 3.41
2627 2934 4.201695 CGAAGAGATGCACATTTCTGTCAG 60.202 45.833 4.60 0.00 33.22 3.51
2659 2969 2.084546 ACCTCTAAAACCTGCGCAATC 58.915 47.619 13.05 0.00 0.00 2.67
2662 2972 1.519408 GAACCTCTAAAACCTGCGCA 58.481 50.000 10.98 10.98 0.00 6.09
2848 3161 3.063180 GGATTCGTGACTGAAATGAGCAG 59.937 47.826 0.00 0.00 39.26 4.24
2867 3180 1.946768 CGTGGTGTTTGTTCAGTGGAT 59.053 47.619 0.00 0.00 0.00 3.41
2887 3200 3.791353 CGTGGCAAAAGAACAGAAGAAAC 59.209 43.478 0.00 0.00 0.00 2.78
2899 3212 1.608590 ACCTGATCAACGTGGCAAAAG 59.391 47.619 0.00 0.00 0.00 2.27
2900 3213 1.336440 CACCTGATCAACGTGGCAAAA 59.664 47.619 12.71 0.00 0.00 2.44
2947 3260 0.169009 GCACCTGCGAAACCAGAATC 59.831 55.000 0.00 0.00 34.77 2.52
3001 3314 5.941948 ACGTTTTCTTTACTTCAGATGGG 57.058 39.130 0.00 0.00 0.00 4.00
3016 3329 4.150451 CAGGCATGGAAATTGAACGTTTTC 59.850 41.667 0.46 1.70 0.00 2.29
3018 3331 3.652274 CAGGCATGGAAATTGAACGTTT 58.348 40.909 0.46 0.00 0.00 3.60
3019 3332 3.302365 CAGGCATGGAAATTGAACGTT 57.698 42.857 0.00 0.00 0.00 3.99
3040 3353 5.463392 GCAAAATCAACAGGAAGGAAGAAAC 59.537 40.000 0.00 0.00 0.00 2.78
3046 3359 2.813754 CGAGCAAAATCAACAGGAAGGA 59.186 45.455 0.00 0.00 0.00 3.36
3048 3361 2.554032 ACCGAGCAAAATCAACAGGAAG 59.446 45.455 0.00 0.00 0.00 3.46
3050 3363 2.151202 GACCGAGCAAAATCAACAGGA 58.849 47.619 0.00 0.00 0.00 3.86
3054 3367 3.300009 CAACTGACCGAGCAAAATCAAC 58.700 45.455 0.00 0.00 0.00 3.18
3072 3385 2.109126 GGCCAGATCGGTGAGCAAC 61.109 63.158 0.00 0.00 36.97 4.17
3075 3388 3.665675 AACGGCCAGATCGGTGAGC 62.666 63.158 2.24 0.00 36.97 4.26
3082 3395 1.132453 GGCAAGTTAAACGGCCAGATC 59.868 52.381 2.24 0.00 41.18 2.75
3095 3410 4.202346 ACCTGCATAACAATTTGGCAAGTT 60.202 37.500 1.71 1.71 33.58 2.66
3099 3414 2.896044 TCACCTGCATAACAATTTGGCA 59.104 40.909 0.78 0.02 0.00 4.92
3109 3424 2.846206 AGGAACTCCATCACCTGCATAA 59.154 45.455 0.00 0.00 38.89 1.90
3110 3425 2.481441 AGGAACTCCATCACCTGCATA 58.519 47.619 0.00 0.00 38.89 3.14
3112 3427 2.777536 AGGAACTCCATCACCTGCA 58.222 52.632 0.00 0.00 38.89 4.41
3131 3446 1.123077 TCCATCTCACCAGGGAATCG 58.877 55.000 0.00 0.00 0.00 3.34
3138 3453 1.279496 TGGTCCTTCCATCTCACCAG 58.721 55.000 0.00 0.00 41.93 4.00
3155 3470 4.980702 TGGGCTGGCTGCTGTTGG 62.981 66.667 16.14 0.00 42.39 3.77
3193 3508 5.525012 TCAACTGATGATGTGCTATTACTGC 59.475 40.000 0.00 0.00 31.50 4.40
3399 3717 5.468072 GTCACAGATGATGCGAATTATTCCT 59.532 40.000 0.00 0.00 37.14 3.36
3462 3780 0.692476 ACTGGACTGCATAGTTGGCA 59.308 50.000 0.00 0.00 37.25 4.92
3490 3811 4.037446 AGCGACAAGTGGAAATGCTAAAAA 59.963 37.500 0.00 0.00 0.00 1.94
3535 3856 5.943416 TCATTGTATTGTCCCTACTGTTTGG 59.057 40.000 0.00 0.00 0.00 3.28
3552 3873 9.330063 CCAATAAACTATGAAGCTCTCATTGTA 57.670 33.333 18.37 10.07 45.92 2.41
3557 3878 6.349300 GGTCCAATAAACTATGAAGCTCTCA 58.651 40.000 0.00 0.00 38.81 3.27
3563 3884 5.989777 CCTACCGGTCCAATAAACTATGAAG 59.010 44.000 12.40 0.00 0.00 3.02
3629 3953 4.039973 GTGGTCCGGTTCATGGATATTCTA 59.960 45.833 0.00 0.00 37.93 2.10
3761 4105 4.991687 TGTGGTTTTTGTCAGGTGTTTTTC 59.008 37.500 0.00 0.00 0.00 2.29
3840 4184 3.008485 CCCTAAGCCCTCATGGTCTAATC 59.992 52.174 0.00 0.00 36.04 1.75
3884 4228 0.532862 CACTATCCACGGGCACATCC 60.533 60.000 0.00 0.00 0.00 3.51
3885 4229 0.532862 CCACTATCCACGGGCACATC 60.533 60.000 0.00 0.00 0.00 3.06
3886 4230 1.526887 CCACTATCCACGGGCACAT 59.473 57.895 0.00 0.00 0.00 3.21
3887 4231 2.986290 CCACTATCCACGGGCACA 59.014 61.111 0.00 0.00 0.00 4.57
3888 4232 2.513897 GCCACTATCCACGGGCAC 60.514 66.667 0.00 0.00 45.70 5.01
3890 4234 4.564110 GGGCCACTATCCACGGGC 62.564 72.222 4.39 0.00 45.67 6.13
3891 4235 2.397413 GATGGGCCACTATCCACGGG 62.397 65.000 9.28 0.00 35.67 5.28
3892 4236 1.071471 GATGGGCCACTATCCACGG 59.929 63.158 9.28 0.00 35.67 4.94
3893 4237 1.338107 TAGATGGGCCACTATCCACG 58.662 55.000 9.28 0.00 35.37 4.94
3894 4238 3.618690 GATAGATGGGCCACTATCCAC 57.381 52.381 27.92 15.28 39.06 4.02
3897 4241 3.445008 TGAGGATAGATGGGCCACTATC 58.555 50.000 29.06 29.06 42.15 2.08
3898 4242 3.567375 TGAGGATAGATGGGCCACTAT 57.433 47.619 21.15 21.15 32.87 2.12
3899 4243 3.344535 TTGAGGATAGATGGGCCACTA 57.655 47.619 9.28 13.25 0.00 2.74
3900 4244 2.196742 TTGAGGATAGATGGGCCACT 57.803 50.000 9.28 11.24 0.00 4.00
3901 4245 3.515602 ATTTGAGGATAGATGGGCCAC 57.484 47.619 9.28 2.67 0.00 5.01
3902 4246 5.553162 AGATTATTTGAGGATAGATGGGCCA 59.447 40.000 9.61 9.61 0.00 5.36
3903 4247 6.069731 AGAGATTATTTGAGGATAGATGGGCC 60.070 42.308 0.00 0.00 0.00 5.80
3904 4248 6.956497 AGAGATTATTTGAGGATAGATGGGC 58.044 40.000 0.00 0.00 0.00 5.36
3905 4249 8.046107 GGAAGAGATTATTTGAGGATAGATGGG 58.954 40.741 0.00 0.00 0.00 4.00
3906 4250 8.600668 TGGAAGAGATTATTTGAGGATAGATGG 58.399 37.037 0.00 0.00 0.00 3.51
3907 4251 9.434420 GTGGAAGAGATTATTTGAGGATAGATG 57.566 37.037 0.00 0.00 0.00 2.90
3908 4252 9.163894 TGTGGAAGAGATTATTTGAGGATAGAT 57.836 33.333 0.00 0.00 0.00 1.98
3909 4253 8.553085 TGTGGAAGAGATTATTTGAGGATAGA 57.447 34.615 0.00 0.00 0.00 1.98
3910 4254 9.050601 GTTGTGGAAGAGATTATTTGAGGATAG 57.949 37.037 0.00 0.00 0.00 2.08
3911 4255 7.993183 GGTTGTGGAAGAGATTATTTGAGGATA 59.007 37.037 0.00 0.00 0.00 2.59
3912 4256 6.830838 GGTTGTGGAAGAGATTATTTGAGGAT 59.169 38.462 0.00 0.00 0.00 3.24
3913 4257 6.180472 GGTTGTGGAAGAGATTATTTGAGGA 58.820 40.000 0.00 0.00 0.00 3.71
3914 4258 5.945784 TGGTTGTGGAAGAGATTATTTGAGG 59.054 40.000 0.00 0.00 0.00 3.86
3915 4259 6.881065 TCTGGTTGTGGAAGAGATTATTTGAG 59.119 38.462 0.00 0.00 0.00 3.02
3916 4260 6.778821 TCTGGTTGTGGAAGAGATTATTTGA 58.221 36.000 0.00 0.00 0.00 2.69
3917 4261 7.636150 ATCTGGTTGTGGAAGAGATTATTTG 57.364 36.000 0.00 0.00 0.00 2.32
3918 4262 9.566432 GATATCTGGTTGTGGAAGAGATTATTT 57.434 33.333 0.00 0.00 0.00 1.40
3919 4263 8.943085 AGATATCTGGTTGTGGAAGAGATTATT 58.057 33.333 3.89 0.00 0.00 1.40
3920 4264 8.503428 AGATATCTGGTTGTGGAAGAGATTAT 57.497 34.615 3.89 0.00 0.00 1.28
3921 4265 7.565029 TGAGATATCTGGTTGTGGAAGAGATTA 59.435 37.037 10.74 0.00 0.00 1.75
3922 4266 6.385176 TGAGATATCTGGTTGTGGAAGAGATT 59.615 38.462 10.74 0.00 0.00 2.40
3923 4267 5.901853 TGAGATATCTGGTTGTGGAAGAGAT 59.098 40.000 10.74 0.00 0.00 2.75
3924 4268 5.272402 TGAGATATCTGGTTGTGGAAGAGA 58.728 41.667 10.74 0.00 0.00 3.10
3925 4269 5.128499 ACTGAGATATCTGGTTGTGGAAGAG 59.872 44.000 10.74 0.00 0.00 2.85
3926 4270 5.026121 ACTGAGATATCTGGTTGTGGAAGA 58.974 41.667 10.74 0.00 0.00 2.87
3927 4271 5.350504 ACTGAGATATCTGGTTGTGGAAG 57.649 43.478 10.74 0.00 0.00 3.46
3928 4272 5.762179 AACTGAGATATCTGGTTGTGGAA 57.238 39.130 10.74 0.00 0.00 3.53
3929 4273 5.762179 AAACTGAGATATCTGGTTGTGGA 57.238 39.130 10.74 0.00 0.00 4.02
3930 4274 6.878317 TCTAAACTGAGATATCTGGTTGTGG 58.122 40.000 10.74 8.69 0.00 4.17
3931 4275 8.660373 GTTTCTAAACTGAGATATCTGGTTGTG 58.340 37.037 10.74 10.71 36.03 3.33
3932 4276 7.824779 GGTTTCTAAACTGAGATATCTGGTTGT 59.175 37.037 10.74 8.39 38.89 3.32
3933 4277 8.043710 AGGTTTCTAAACTGAGATATCTGGTTG 58.956 37.037 10.74 4.93 38.89 3.77
3934 4278 8.152023 AGGTTTCTAAACTGAGATATCTGGTT 57.848 34.615 10.74 11.76 38.89 3.67
3935 4279 7.400339 TGAGGTTTCTAAACTGAGATATCTGGT 59.600 37.037 10.74 6.06 38.89 4.00
3936 4280 7.786030 TGAGGTTTCTAAACTGAGATATCTGG 58.214 38.462 10.74 5.40 38.89 3.86
3937 4281 9.658799 TTTGAGGTTTCTAAACTGAGATATCTG 57.341 33.333 10.74 0.00 38.89 2.90
3942 4286 8.924511 TGATTTTGAGGTTTCTAAACTGAGAT 57.075 30.769 5.62 0.00 38.89 2.75
3943 4287 8.924511 ATGATTTTGAGGTTTCTAAACTGAGA 57.075 30.769 5.62 0.00 38.89 3.27
3955 4299 9.941325 TGCATGTAATTTTATGATTTTGAGGTT 57.059 25.926 0.00 0.00 0.00 3.50
3956 4300 9.941325 TTGCATGTAATTTTATGATTTTGAGGT 57.059 25.926 0.00 0.00 0.00 3.85
3975 4319 9.638239 CACTTAATTAGGTTTTATGTTGCATGT 57.362 29.630 0.00 0.00 0.00 3.21
3976 4320 9.086336 CCACTTAATTAGGTTTTATGTTGCATG 57.914 33.333 0.00 0.00 0.00 4.06
3977 4321 9.030452 TCCACTTAATTAGGTTTTATGTTGCAT 57.970 29.630 0.00 0.00 0.00 3.96
3978 4322 8.410673 TCCACTTAATTAGGTTTTATGTTGCA 57.589 30.769 0.00 0.00 0.00 4.08
3979 4323 7.488150 GCTCCACTTAATTAGGTTTTATGTTGC 59.512 37.037 0.00 0.00 0.00 4.17
3980 4324 8.739972 AGCTCCACTTAATTAGGTTTTATGTTG 58.260 33.333 0.00 0.00 0.00 3.33
3981 4325 8.879427 AGCTCCACTTAATTAGGTTTTATGTT 57.121 30.769 0.00 0.00 0.00 2.71
3982 4326 8.107095 TGAGCTCCACTTAATTAGGTTTTATGT 58.893 33.333 12.15 0.00 0.00 2.29
3983 4327 8.506168 TGAGCTCCACTTAATTAGGTTTTATG 57.494 34.615 12.15 0.00 0.00 1.90
3984 4328 9.343539 GATGAGCTCCACTTAATTAGGTTTTAT 57.656 33.333 12.15 0.00 0.00 1.40
3985 4329 8.548877 AGATGAGCTCCACTTAATTAGGTTTTA 58.451 33.333 12.15 0.00 0.00 1.52
3986 4330 7.337942 CAGATGAGCTCCACTTAATTAGGTTTT 59.662 37.037 12.15 0.00 0.00 2.43
3987 4331 6.825721 CAGATGAGCTCCACTTAATTAGGTTT 59.174 38.462 12.15 0.00 0.00 3.27
3988 4332 6.156949 TCAGATGAGCTCCACTTAATTAGGTT 59.843 38.462 12.15 0.00 0.00 3.50
3989 4333 5.663106 TCAGATGAGCTCCACTTAATTAGGT 59.337 40.000 12.15 0.00 0.00 3.08
3990 4334 5.988561 GTCAGATGAGCTCCACTTAATTAGG 59.011 44.000 12.15 0.00 0.00 2.69
3991 4335 6.815089 AGTCAGATGAGCTCCACTTAATTAG 58.185 40.000 12.15 0.00 0.00 1.73
3992 4336 6.183360 GGAGTCAGATGAGCTCCACTTAATTA 60.183 42.308 12.15 0.00 45.93 1.40
3993 4337 5.396213 GGAGTCAGATGAGCTCCACTTAATT 60.396 44.000 12.15 0.00 45.93 1.40
3994 4338 4.100808 GGAGTCAGATGAGCTCCACTTAAT 59.899 45.833 12.15 1.29 45.93 1.40
3995 4339 3.449018 GGAGTCAGATGAGCTCCACTTAA 59.551 47.826 12.15 0.00 45.93 1.85
3996 4340 3.027412 GGAGTCAGATGAGCTCCACTTA 58.973 50.000 12.15 0.00 45.93 2.24
3997 4341 1.830477 GGAGTCAGATGAGCTCCACTT 59.170 52.381 12.15 0.00 45.93 3.16
3998 4342 1.484038 GGAGTCAGATGAGCTCCACT 58.516 55.000 12.15 7.61 45.93 4.00
4001 4345 1.774110 TCTGGAGTCAGATGAGCTCC 58.226 55.000 12.15 17.50 44.39 4.70
4009 4353 2.235650 CCTTCAGCATTCTGGAGTCAGA 59.764 50.000 0.00 0.00 43.16 3.27
4010 4354 2.630158 CCTTCAGCATTCTGGAGTCAG 58.370 52.381 0.00 0.00 43.16 3.51
4011 4355 1.280133 CCCTTCAGCATTCTGGAGTCA 59.720 52.381 0.00 0.00 43.16 3.41
4012 4356 1.407989 CCCCTTCAGCATTCTGGAGTC 60.408 57.143 0.00 0.00 43.16 3.36
4013 4357 0.622665 CCCCTTCAGCATTCTGGAGT 59.377 55.000 0.00 0.00 43.16 3.85
4014 4358 0.622665 ACCCCTTCAGCATTCTGGAG 59.377 55.000 0.00 0.00 44.10 3.86
4015 4359 1.965414 TACCCCTTCAGCATTCTGGA 58.035 50.000 0.00 0.00 40.69 3.86
4016 4360 2.755103 GTTTACCCCTTCAGCATTCTGG 59.245 50.000 0.00 0.00 40.69 3.86
4017 4361 3.441572 CAGTTTACCCCTTCAGCATTCTG 59.558 47.826 0.00 0.00 41.67 3.02
4018 4362 3.690460 CAGTTTACCCCTTCAGCATTCT 58.310 45.455 0.00 0.00 0.00 2.40
4019 4363 2.164422 GCAGTTTACCCCTTCAGCATTC 59.836 50.000 0.00 0.00 0.00 2.67
4020 4364 2.171003 GCAGTTTACCCCTTCAGCATT 58.829 47.619 0.00 0.00 0.00 3.56
4021 4365 1.075374 TGCAGTTTACCCCTTCAGCAT 59.925 47.619 0.00 0.00 0.00 3.79
4022 4366 0.476338 TGCAGTTTACCCCTTCAGCA 59.524 50.000 0.00 0.00 0.00 4.41
4023 4367 1.616159 TTGCAGTTTACCCCTTCAGC 58.384 50.000 0.00 0.00 0.00 4.26
4024 4368 4.142049 TGTTTTTGCAGTTTACCCCTTCAG 60.142 41.667 0.00 0.00 0.00 3.02
4025 4369 3.769844 TGTTTTTGCAGTTTACCCCTTCA 59.230 39.130 0.00 0.00 0.00 3.02
4026 4370 4.394439 TGTTTTTGCAGTTTACCCCTTC 57.606 40.909 0.00 0.00 0.00 3.46
4027 4371 4.020128 TGTTGTTTTTGCAGTTTACCCCTT 60.020 37.500 0.00 0.00 0.00 3.95
4028 4372 3.515901 TGTTGTTTTTGCAGTTTACCCCT 59.484 39.130 0.00 0.00 0.00 4.79
4029 4373 3.863041 TGTTGTTTTTGCAGTTTACCCC 58.137 40.909 0.00 0.00 0.00 4.95
4030 4374 6.429791 AATTGTTGTTTTTGCAGTTTACCC 57.570 33.333 0.00 0.00 0.00 3.69
4031 4375 7.691877 CAGAAATTGTTGTTTTTGCAGTTTACC 59.308 33.333 0.00 0.00 0.00 2.85
4032 4376 8.439286 TCAGAAATTGTTGTTTTTGCAGTTTAC 58.561 29.630 0.00 0.00 0.00 2.01
4033 4377 8.539770 TCAGAAATTGTTGTTTTTGCAGTTTA 57.460 26.923 0.00 0.00 0.00 2.01
4034 4378 7.361116 CCTCAGAAATTGTTGTTTTTGCAGTTT 60.361 33.333 0.00 0.00 0.00 2.66
4035 4379 6.092533 CCTCAGAAATTGTTGTTTTTGCAGTT 59.907 34.615 0.00 0.00 0.00 3.16
4036 4380 5.581874 CCTCAGAAATTGTTGTTTTTGCAGT 59.418 36.000 0.00 0.00 0.00 4.40
4037 4381 5.006941 CCCTCAGAAATTGTTGTTTTTGCAG 59.993 40.000 0.00 0.00 0.00 4.41
4038 4382 4.874966 CCCTCAGAAATTGTTGTTTTTGCA 59.125 37.500 0.00 0.00 0.00 4.08
4039 4383 4.273235 CCCCTCAGAAATTGTTGTTTTTGC 59.727 41.667 0.00 0.00 0.00 3.68
4040 4384 4.815846 CCCCCTCAGAAATTGTTGTTTTTG 59.184 41.667 0.00 0.00 0.00 2.44
4041 4385 4.685848 GCCCCCTCAGAAATTGTTGTTTTT 60.686 41.667 0.00 0.00 0.00 1.94
4042 4386 3.181455 GCCCCCTCAGAAATTGTTGTTTT 60.181 43.478 0.00 0.00 0.00 2.43
4043 4387 2.368548 GCCCCCTCAGAAATTGTTGTTT 59.631 45.455 0.00 0.00 0.00 2.83
4044 4388 1.970640 GCCCCCTCAGAAATTGTTGTT 59.029 47.619 0.00 0.00 0.00 2.83
4045 4389 1.632589 GCCCCCTCAGAAATTGTTGT 58.367 50.000 0.00 0.00 0.00 3.32
4046 4390 0.897621 GGCCCCCTCAGAAATTGTTG 59.102 55.000 0.00 0.00 0.00 3.33
4047 4391 0.486879 TGGCCCCCTCAGAAATTGTT 59.513 50.000 0.00 0.00 0.00 2.83
4048 4392 0.486879 TTGGCCCCCTCAGAAATTGT 59.513 50.000 0.00 0.00 0.00 2.71
4049 4393 1.551883 CTTTGGCCCCCTCAGAAATTG 59.448 52.381 0.00 0.00 0.00 2.32
4050 4394 1.432807 TCTTTGGCCCCCTCAGAAATT 59.567 47.619 0.00 0.00 0.00 1.82
4051 4395 1.006400 CTCTTTGGCCCCCTCAGAAAT 59.994 52.381 0.00 0.00 0.00 2.17
4052 4396 0.405585 CTCTTTGGCCCCCTCAGAAA 59.594 55.000 0.00 0.00 0.00 2.52
4053 4397 0.772124 ACTCTTTGGCCCCCTCAGAA 60.772 55.000 0.00 0.00 0.00 3.02
4054 4398 0.118346 TACTCTTTGGCCCCCTCAGA 59.882 55.000 0.00 0.00 0.00 3.27
4055 4399 1.216990 ATACTCTTTGGCCCCCTCAG 58.783 55.000 0.00 0.00 0.00 3.35
4056 4400 2.124411 GTATACTCTTTGGCCCCCTCA 58.876 52.381 0.00 0.00 0.00 3.86
4057 4401 2.409570 AGTATACTCTTTGGCCCCCTC 58.590 52.381 0.00 0.00 0.00 4.30
4058 4402 2.588925 AGTATACTCTTTGGCCCCCT 57.411 50.000 0.00 0.00 0.00 4.79
4059 4403 3.288092 CAAAGTATACTCTTTGGCCCCC 58.712 50.000 5.70 0.00 45.84 5.40
4073 4417 9.953697 TTCGTTGTGCTTAATTAAACAAAGTAT 57.046 25.926 19.27 0.00 34.54 2.12
4074 4418 9.784680 TTTCGTTGTGCTTAATTAAACAAAGTA 57.215 25.926 19.27 12.46 34.54 2.24
4075 4419 8.690680 TTTCGTTGTGCTTAATTAAACAAAGT 57.309 26.923 19.27 0.00 34.54 2.66
4076 4420 7.787480 GCTTTCGTTGTGCTTAATTAAACAAAG 59.213 33.333 14.20 15.34 34.54 2.77
4077 4421 7.275779 TGCTTTCGTTGTGCTTAATTAAACAAA 59.724 29.630 14.20 2.81 34.54 2.83
4078 4422 6.752351 TGCTTTCGTTGTGCTTAATTAAACAA 59.248 30.769 10.17 10.17 0.00 2.83
4079 4423 6.266323 TGCTTTCGTTGTGCTTAATTAAACA 58.734 32.000 0.00 0.00 0.00 2.83
4080 4424 6.741448 TGCTTTCGTTGTGCTTAATTAAAC 57.259 33.333 0.00 0.00 0.00 2.01
4081 4425 7.757097 TTTGCTTTCGTTGTGCTTAATTAAA 57.243 28.000 0.00 0.00 0.00 1.52
4082 4426 7.938563 ATTTGCTTTCGTTGTGCTTAATTAA 57.061 28.000 0.00 0.00 0.00 1.40
4083 4427 7.938563 AATTTGCTTTCGTTGTGCTTAATTA 57.061 28.000 0.00 0.00 0.00 1.40
4084 4428 6.843069 AATTTGCTTTCGTTGTGCTTAATT 57.157 29.167 0.00 0.00 0.00 1.40
4085 4429 6.701400 AGAAATTTGCTTTCGTTGTGCTTAAT 59.299 30.769 0.00 0.00 46.53 1.40
4086 4430 6.039616 AGAAATTTGCTTTCGTTGTGCTTAA 58.960 32.000 0.00 0.00 46.53 1.85
4087 4431 5.587289 AGAAATTTGCTTTCGTTGTGCTTA 58.413 33.333 0.00 0.00 46.53 3.09
4088 4432 4.432712 AGAAATTTGCTTTCGTTGTGCTT 58.567 34.783 0.00 0.00 46.53 3.91
4089 4433 4.045636 AGAAATTTGCTTTCGTTGTGCT 57.954 36.364 0.00 0.00 46.53 4.40
4090 4434 4.267452 TCAAGAAATTTGCTTTCGTTGTGC 59.733 37.500 0.00 0.00 46.53 4.57
4091 4435 5.743398 TCTCAAGAAATTTGCTTTCGTTGTG 59.257 36.000 0.00 0.00 46.53 3.33
4092 4436 5.890334 TCTCAAGAAATTTGCTTTCGTTGT 58.110 33.333 0.00 0.00 46.53 3.32
4093 4437 6.201517 TCTCTCAAGAAATTTGCTTTCGTTG 58.798 36.000 0.00 0.00 46.53 4.10
4094 4438 6.377327 TCTCTCAAGAAATTTGCTTTCGTT 57.623 33.333 0.00 0.00 46.53 3.85
4095 4439 6.566197 ATCTCTCAAGAAATTTGCTTTCGT 57.434 33.333 0.00 0.00 46.53 3.85
4096 4440 7.864307 AAATCTCTCAAGAAATTTGCTTTCG 57.136 32.000 0.00 0.00 46.53 3.46
4102 4446 7.095355 CCTTGGCAAAATCTCTCAAGAAATTTG 60.095 37.037 0.00 10.37 41.11 2.32
4103 4447 6.932960 CCTTGGCAAAATCTCTCAAGAAATTT 59.067 34.615 0.00 0.00 37.57 1.82
4104 4448 6.042437 ACCTTGGCAAAATCTCTCAAGAAATT 59.958 34.615 0.00 0.00 37.57 1.82
4105 4449 5.541484 ACCTTGGCAAAATCTCTCAAGAAAT 59.459 36.000 0.00 0.00 37.57 2.17
4106 4450 4.895297 ACCTTGGCAAAATCTCTCAAGAAA 59.105 37.500 0.00 0.00 37.57 2.52
4107 4451 4.473444 ACCTTGGCAAAATCTCTCAAGAA 58.527 39.130 0.00 0.00 37.57 2.52
4108 4452 4.104383 ACCTTGGCAAAATCTCTCAAGA 57.896 40.909 0.00 0.00 37.57 3.02
4109 4453 4.553323 CAACCTTGGCAAAATCTCTCAAG 58.447 43.478 0.00 0.00 35.80 3.02
4110 4454 3.321682 CCAACCTTGGCAAAATCTCTCAA 59.678 43.478 0.00 0.00 42.21 3.02
4111 4455 2.892852 CCAACCTTGGCAAAATCTCTCA 59.107 45.455 0.00 0.00 42.21 3.27
4112 4456 3.582714 CCAACCTTGGCAAAATCTCTC 57.417 47.619 0.00 0.00 42.21 3.20
4137 4481 2.903855 GATCTGCGTGGGCCATGG 60.904 66.667 26.39 14.94 38.85 3.66
4138 4482 1.750018 TTGATCTGCGTGGGCCATG 60.750 57.895 21.68 21.68 38.85 3.66
4139 4483 1.750399 GTTGATCTGCGTGGGCCAT 60.750 57.895 10.70 0.00 38.85 4.40
4140 4484 2.359850 GTTGATCTGCGTGGGCCA 60.360 61.111 0.00 0.00 38.85 5.36
4141 4485 1.750399 ATGTTGATCTGCGTGGGCC 60.750 57.895 0.00 0.00 38.85 5.80
4142 4486 1.308069 ACATGTTGATCTGCGTGGGC 61.308 55.000 0.00 0.00 40.52 5.36
4143 4487 1.935873 CTACATGTTGATCTGCGTGGG 59.064 52.381 2.30 3.70 0.00 4.61
4144 4488 1.328680 GCTACATGTTGATCTGCGTGG 59.671 52.381 11.66 0.00 0.00 4.94
4145 4489 2.274437 AGCTACATGTTGATCTGCGTG 58.726 47.619 11.66 1.19 0.00 5.34
4146 4490 2.680312 AGCTACATGTTGATCTGCGT 57.320 45.000 11.66 0.00 0.00 5.24
4147 4491 2.034254 CGAAGCTACATGTTGATCTGCG 60.034 50.000 11.66 6.24 0.00 5.18
4148 4492 3.582444 CGAAGCTACATGTTGATCTGC 57.418 47.619 11.66 3.92 0.00 4.26
4164 4508 2.954753 GCCACAACCACTCGCGAAG 61.955 63.158 11.33 5.67 0.00 3.79
4165 4509 2.970324 GCCACAACCACTCGCGAA 60.970 61.111 11.33 0.00 0.00 4.70
4166 4510 4.980805 GGCCACAACCACTCGCGA 62.981 66.667 9.26 9.26 0.00 5.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.