Multiple sequence alignment - TraesCS2B01G430100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G430100 chr2B 100.000 2663 0 0 1 2663 617951214 617948552 0.000000e+00 4918.0
1 TraesCS2B01G430100 chr2B 98.214 56 0 1 2609 2663 50345051 50344996 2.180000e-16 97.1
2 TraesCS2B01G430100 chr2B 100.000 51 0 0 2613 2663 27571166 27571116 7.850000e-16 95.3
3 TraesCS2B01G430100 chr2B 96.552 58 1 1 2607 2663 44819682 44819739 7.850000e-16 95.3
4 TraesCS2B01G430100 chr2B 84.524 84 13 0 2527 2610 209243206 209243123 1.700000e-12 84.2
5 TraesCS2B01G430100 chr2D 89.920 1369 112 13 937 2295 523637677 523636325 0.000000e+00 1740.0
6 TraesCS2B01G430100 chr2D 87.097 682 53 12 1153 1803 523629476 523628799 0.000000e+00 739.0
7 TraesCS2B01G430100 chr2D 86.402 353 33 8 815 1161 523630918 523630575 3.240000e-99 372.0
8 TraesCS2B01G430100 chr2D 87.097 124 13 1 1966 2086 523628362 523628239 1.290000e-28 137.0
9 TraesCS2B01G430100 chr2D 86.517 89 12 0 2527 2615 150619726 150619638 6.070000e-17 99.0
10 TraesCS2B01G430100 chr2A 88.022 1077 98 17 1364 2420 669436180 669435115 0.000000e+00 1245.0
11 TraesCS2B01G430100 chr2A 83.644 483 52 14 917 1373 669438373 669437892 1.890000e-116 429.0
12 TraesCS2B01G430100 chr7D 81.768 181 24 4 2106 2278 364371289 364371110 2.760000e-30 143.0
13 TraesCS2B01G430100 chr3D 83.766 154 19 3 2131 2278 580128488 580128335 9.940000e-30 141.0
14 TraesCS2B01G430100 chr3D 87.356 87 11 0 2524 2610 548534060 548534146 1.690000e-17 100.0
15 TraesCS2B01G430100 chr6D 81.111 180 26 4 2106 2278 337847285 337847107 1.290000e-28 137.0
16 TraesCS2B01G430100 chr5B 80.220 182 28 5 2104 2278 381720762 381720942 2.150000e-26 130.0
17 TraesCS2B01G430100 chr5B 92.188 64 5 0 2600 2663 702101334 702101397 1.020000e-14 91.6
18 TraesCS2B01G430100 chr6B 80.000 185 25 9 2104 2278 20018520 20018338 2.780000e-25 126.0
19 TraesCS2B01G430100 chr6B 96.429 56 2 0 2608 2663 666395503 666395448 2.820000e-15 93.5
20 TraesCS2B01G430100 chr6A 80.588 170 26 4 2116 2278 570386014 570385845 1.000000e-24 124.0
21 TraesCS2B01G430100 chr1D 79.888 179 29 6 2107 2278 203468075 203468253 1.000000e-24 124.0
22 TraesCS2B01G430100 chr1D 79.891 184 23 10 2106 2278 221084213 221084033 3.600000e-24 122.0
23 TraesCS2B01G430100 chr1D 86.486 74 10 0 2524 2597 95934027 95934100 6.110000e-12 82.4
24 TraesCS2B01G430100 chr4D 79.670 182 28 4 2106 2278 417812877 417812696 3.600000e-24 122.0
25 TraesCS2B01G430100 chr3B 88.095 84 10 0 2527 2610 726739570 726739653 1.690000e-17 100.0
26 TraesCS2B01G430100 chr3B 100.000 51 0 0 2613 2663 27080856 27080806 7.850000e-16 95.3
27 TraesCS2B01G430100 chr7B 98.148 54 1 0 2610 2663 635766332 635766279 7.850000e-16 95.3
28 TraesCS2B01G430100 chr4B 98.148 54 1 0 2610 2663 649210600 649210547 7.850000e-16 95.3
29 TraesCS2B01G430100 chr4B 100.000 48 0 0 2616 2663 380121696 380121649 3.650000e-14 89.8
30 TraesCS2B01G430100 chr3A 92.308 52 4 0 1377 1428 276963852 276963801 1.020000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G430100 chr2B 617948552 617951214 2662 True 4918 4918 100.000000 1 2663 1 chr2B.!!$R4 2662
1 TraesCS2B01G430100 chr2D 523636325 523637677 1352 True 1740 1740 89.920000 937 2295 1 chr2D.!!$R2 1358
2 TraesCS2B01G430100 chr2D 523628239 523630918 2679 True 416 739 86.865333 815 2086 3 chr2D.!!$R3 1271
3 TraesCS2B01G430100 chr2A 669435115 669438373 3258 True 837 1245 85.833000 917 2420 2 chr2A.!!$R1 1503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
751 752 0.028902 GGTAAAGGCGCGGCAATTAG 59.971 55.0 34.94 0.0 0.0 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2490 5694 0.036306 AAACCTCGTGTTAGGGCAGG 59.964 55.0 0.0 0.0 41.32 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 8.669394 TTTTCTCGTTTTCTCAAGTTCTTTTC 57.331 30.769 0.00 0.00 0.00 2.29
51 52 7.611213 TTCTCGTTTTCTCAAGTTCTTTTCT 57.389 32.000 0.00 0.00 0.00 2.52
52 53 7.611213 TCTCGTTTTCTCAAGTTCTTTTCTT 57.389 32.000 0.00 0.00 0.00 2.52
53 54 8.040716 TCTCGTTTTCTCAAGTTCTTTTCTTT 57.959 30.769 0.00 0.00 0.00 2.52
54 55 8.512138 TCTCGTTTTCTCAAGTTCTTTTCTTTT 58.488 29.630 0.00 0.00 0.00 2.27
55 56 9.129209 CTCGTTTTCTCAAGTTCTTTTCTTTTT 57.871 29.630 0.00 0.00 0.00 1.94
117 118 9.982291 TTGCGTACATCTTCTAAATTAATGAAC 57.018 29.630 0.00 0.00 0.00 3.18
118 119 9.157104 TGCGTACATCTTCTAAATTAATGAACA 57.843 29.630 0.00 0.00 0.00 3.18
155 156 9.689976 ACACGAATATTTTTGAAATCATGAACA 57.310 25.926 0.00 0.00 0.00 3.18
242 243 9.483062 TTTTTACAAATTCGCAAAGATTGTTTG 57.517 25.926 2.06 2.06 35.89 2.93
243 244 7.993821 TTACAAATTCGCAAAGATTGTTTGA 57.006 28.000 10.23 0.00 35.89 2.69
244 245 6.900568 ACAAATTCGCAAAGATTGTTTGAA 57.099 29.167 10.23 0.00 33.82 2.69
245 246 7.301068 ACAAATTCGCAAAGATTGTTTGAAA 57.699 28.000 10.23 4.24 33.82 2.69
246 247 7.179410 ACAAATTCGCAAAGATTGTTTGAAAC 58.821 30.769 10.23 0.14 33.82 2.78
247 248 7.064490 ACAAATTCGCAAAGATTGTTTGAAACT 59.936 29.630 9.69 0.00 33.82 2.66
248 249 7.538303 AATTCGCAAAGATTGTTTGAAACTT 57.462 28.000 9.69 0.00 0.00 2.66
249 250 5.947503 TCGCAAAGATTGTTTGAAACTTG 57.052 34.783 9.69 6.17 0.00 3.16
250 251 5.406649 TCGCAAAGATTGTTTGAAACTTGT 58.593 33.333 9.69 0.00 0.00 3.16
251 252 5.288232 TCGCAAAGATTGTTTGAAACTTGTG 59.712 36.000 9.69 10.95 0.00 3.33
252 253 5.288232 CGCAAAGATTGTTTGAAACTTGTGA 59.712 36.000 9.69 0.00 29.05 3.58
253 254 6.183360 CGCAAAGATTGTTTGAAACTTGTGAA 60.183 34.615 9.69 0.00 29.05 3.18
254 255 6.955407 GCAAAGATTGTTTGAAACTTGTGAAC 59.045 34.615 9.69 0.00 0.00 3.18
255 256 7.359933 GCAAAGATTGTTTGAAACTTGTGAACA 60.360 33.333 9.69 0.00 0.00 3.18
256 257 8.658609 CAAAGATTGTTTGAAACTTGTGAACAT 58.341 29.630 9.69 0.00 31.15 2.71
257 258 8.776376 AAGATTGTTTGAAACTTGTGAACATT 57.224 26.923 9.69 0.00 31.15 2.71
258 259 8.776376 AGATTGTTTGAAACTTGTGAACATTT 57.224 26.923 9.69 0.00 31.15 2.32
259 260 9.218440 AGATTGTTTGAAACTTGTGAACATTTT 57.782 25.926 9.69 0.00 31.15 1.82
260 261 9.824534 GATTGTTTGAAACTTGTGAACATTTTT 57.175 25.926 9.69 0.00 31.15 1.94
341 342 7.834068 TTTTGAATCGACCAAATTGTTTTGA 57.166 28.000 13.44 0.00 44.11 2.69
342 343 7.834068 TTTGAATCGACCAAATTGTTTTGAA 57.166 28.000 9.85 0.00 44.11 2.69
343 344 8.430801 TTTGAATCGACCAAATTGTTTTGAAT 57.569 26.923 9.85 0.00 44.11 2.57
344 345 8.430801 TTGAATCGACCAAATTGTTTTGAATT 57.569 26.923 0.00 0.00 44.11 2.17
345 346 8.430801 TGAATCGACCAAATTGTTTTGAATTT 57.569 26.923 0.00 0.00 44.11 1.82
346 347 8.887717 TGAATCGACCAAATTGTTTTGAATTTT 58.112 25.926 0.00 0.00 44.11 1.82
347 348 9.157259 GAATCGACCAAATTGTTTTGAATTTTG 57.843 29.630 0.00 0.00 44.11 2.44
348 349 7.834068 TCGACCAAATTGTTTTGAATTTTGA 57.166 28.000 0.19 0.00 44.11 2.69
349 350 8.430801 TCGACCAAATTGTTTTGAATTTTGAT 57.569 26.923 0.19 0.00 44.11 2.57
350 351 9.534565 TCGACCAAATTGTTTTGAATTTTGATA 57.465 25.926 0.19 0.00 44.11 2.15
369 370 9.645059 TTTTGATAACAACTTTTGAACATCACA 57.355 25.926 0.00 0.00 35.63 3.58
370 371 9.645059 TTTGATAACAACTTTTGAACATCACAA 57.355 25.926 0.00 0.00 35.63 3.33
371 372 9.814899 TTGATAACAACTTTTGAACATCACAAT 57.185 25.926 0.00 0.00 31.06 2.71
372 373 9.814899 TGATAACAACTTTTGAACATCACAATT 57.185 25.926 0.00 0.00 0.00 2.32
374 375 7.538303 AACAACTTTTGAACATCACAATTCC 57.462 32.000 0.00 0.00 0.00 3.01
375 376 6.877236 ACAACTTTTGAACATCACAATTCCT 58.123 32.000 0.00 0.00 0.00 3.36
376 377 7.330262 ACAACTTTTGAACATCACAATTCCTT 58.670 30.769 0.00 0.00 0.00 3.36
377 378 7.823799 ACAACTTTTGAACATCACAATTCCTTT 59.176 29.630 0.00 0.00 0.00 3.11
378 379 8.667463 CAACTTTTGAACATCACAATTCCTTTT 58.333 29.630 0.00 0.00 0.00 2.27
379 380 8.791327 ACTTTTGAACATCACAATTCCTTTTT 57.209 26.923 0.00 0.00 0.00 1.94
380 381 9.883142 ACTTTTGAACATCACAATTCCTTTTTA 57.117 25.926 0.00 0.00 0.00 1.52
488 489 9.980780 AAAAATCAAAGTACCGAACAAAATTTG 57.019 25.926 3.89 3.89 0.00 2.32
489 490 8.934507 AAATCAAAGTACCGAACAAAATTTGA 57.065 26.923 13.19 0.00 38.92 2.69
490 491 8.934507 AATCAAAGTACCGAACAAAATTTGAA 57.065 26.923 13.19 0.00 38.31 2.69
491 492 8.934507 ATCAAAGTACCGAACAAAATTTGAAA 57.065 26.923 13.19 0.00 38.31 2.69
492 493 8.934507 TCAAAGTACCGAACAAAATTTGAAAT 57.065 26.923 13.19 0.00 33.59 2.17
493 494 9.372369 TCAAAGTACCGAACAAAATTTGAAATT 57.628 25.926 13.19 0.00 33.59 1.82
494 495 9.631639 CAAAGTACCGAACAAAATTTGAAATTC 57.368 29.630 13.19 5.24 0.00 2.17
495 496 8.934507 AAGTACCGAACAAAATTTGAAATTCA 57.065 26.923 13.19 0.00 0.00 2.57
496 497 9.541143 AAGTACCGAACAAAATTTGAAATTCAT 57.459 25.926 13.19 0.78 0.00 2.57
497 498 8.977505 AGTACCGAACAAAATTTGAAATTCATG 58.022 29.630 13.19 8.80 0.00 3.07
498 499 8.973378 GTACCGAACAAAATTTGAAATTCATGA 58.027 29.630 13.19 0.00 0.00 3.07
499 500 8.430801 ACCGAACAAAATTTGAAATTCATGAA 57.569 26.923 11.26 11.26 0.00 2.57
500 501 8.334632 ACCGAACAAAATTTGAAATTCATGAAC 58.665 29.630 11.07 0.00 0.00 3.18
501 502 8.333908 CCGAACAAAATTTGAAATTCATGAACA 58.666 29.630 11.07 1.31 0.00 3.18
502 503 9.866936 CGAACAAAATTTGAAATTCATGAACAT 57.133 25.926 11.07 2.03 0.00 2.71
569 570 8.950208 ATTATTTTTCAAACAGTTTTTCCCGA 57.050 26.923 0.00 0.00 0.00 5.14
570 571 8.773404 TTATTTTTCAAACAGTTTTTCCCGAA 57.227 26.923 0.00 0.00 0.00 4.30
571 572 7.857734 ATTTTTCAAACAGTTTTTCCCGAAT 57.142 28.000 0.00 0.00 0.00 3.34
572 573 7.674471 TTTTTCAAACAGTTTTTCCCGAATT 57.326 28.000 0.00 0.00 0.00 2.17
573 574 6.895607 TTTCAAACAGTTTTTCCCGAATTC 57.104 33.333 0.00 0.00 0.00 2.17
574 575 4.602995 TCAAACAGTTTTTCCCGAATTCG 58.397 39.130 20.92 20.92 39.44 3.34
575 576 2.699251 ACAGTTTTTCCCGAATTCGC 57.301 45.000 22.36 6.79 38.18 4.70
576 577 1.950909 ACAGTTTTTCCCGAATTCGCA 59.049 42.857 22.36 7.96 38.18 5.10
577 578 2.556622 ACAGTTTTTCCCGAATTCGCAT 59.443 40.909 22.36 0.00 38.18 4.73
578 579 3.005367 ACAGTTTTTCCCGAATTCGCATT 59.995 39.130 22.36 0.00 38.18 3.56
579 580 3.987220 CAGTTTTTCCCGAATTCGCATTT 59.013 39.130 22.36 0.00 38.18 2.32
580 581 4.447389 CAGTTTTTCCCGAATTCGCATTTT 59.553 37.500 22.36 0.00 38.18 1.82
581 582 5.050431 CAGTTTTTCCCGAATTCGCATTTTT 60.050 36.000 22.36 0.72 38.18 1.94
646 647 8.680039 AAAGATGAAAAGGAAAATGAAATGCA 57.320 26.923 0.00 0.00 0.00 3.96
647 648 8.857694 AAGATGAAAAGGAAAATGAAATGCAT 57.142 26.923 0.00 0.00 39.43 3.96
649 650 9.947433 AGATGAAAAGGAAAATGAAATGCATTA 57.053 25.926 13.39 0.00 46.25 1.90
658 659 9.264719 GGAAAATGAAATGCATTAAATAGAGGG 57.735 33.333 13.39 0.00 46.25 4.30
659 660 8.667076 AAAATGAAATGCATTAAATAGAGGGC 57.333 30.769 13.39 0.00 46.25 5.19
660 661 6.982160 ATGAAATGCATTAAATAGAGGGCA 57.018 33.333 13.39 0.00 31.73 5.36
661 662 6.982160 TGAAATGCATTAAATAGAGGGCAT 57.018 33.333 13.39 0.00 43.19 4.40
662 663 6.985117 TGAAATGCATTAAATAGAGGGCATC 58.015 36.000 13.39 2.22 40.74 3.91
663 664 5.990120 AATGCATTAAATAGAGGGCATCC 57.010 39.130 11.02 0.00 40.74 3.51
664 665 3.766545 TGCATTAAATAGAGGGCATCCC 58.233 45.455 0.00 0.00 45.90 3.85
675 676 2.755469 GCATCCCACCCAACGCAT 60.755 61.111 0.00 0.00 0.00 4.73
676 677 3.067480 GCATCCCACCCAACGCATG 62.067 63.158 0.00 0.00 0.00 4.06
701 702 3.788766 CCAAAAGGACGCGCGGAG 61.789 66.667 35.22 14.29 0.00 4.63
721 722 3.323136 CGCGACCGCTATGTCTGC 61.323 66.667 12.69 0.00 39.32 4.26
728 729 2.187946 GCTATGTCTGCGGCCTGT 59.812 61.111 0.00 0.00 0.00 4.00
729 730 1.450312 GCTATGTCTGCGGCCTGTT 60.450 57.895 0.00 0.00 0.00 3.16
730 731 0.179084 GCTATGTCTGCGGCCTGTTA 60.179 55.000 0.00 0.00 0.00 2.41
731 732 1.742411 GCTATGTCTGCGGCCTGTTAA 60.742 52.381 0.00 0.00 0.00 2.01
732 733 2.205074 CTATGTCTGCGGCCTGTTAAG 58.795 52.381 0.00 0.00 0.00 1.85
734 735 1.003718 GTCTGCGGCCTGTTAAGGT 60.004 57.895 0.00 0.00 46.43 3.50
735 736 0.248289 GTCTGCGGCCTGTTAAGGTA 59.752 55.000 0.00 0.00 46.43 3.08
736 737 0.978151 TCTGCGGCCTGTTAAGGTAA 59.022 50.000 0.00 0.00 46.43 2.85
737 738 1.348366 TCTGCGGCCTGTTAAGGTAAA 59.652 47.619 0.00 0.00 46.43 2.01
738 739 1.737793 CTGCGGCCTGTTAAGGTAAAG 59.262 52.381 0.00 0.00 46.43 1.85
739 740 1.092348 GCGGCCTGTTAAGGTAAAGG 58.908 55.000 0.00 0.00 46.43 3.11
742 743 0.450583 GCCTGTTAAGGTAAAGGCGC 59.549 55.000 0.00 0.00 45.30 6.53
743 744 0.725117 CCTGTTAAGGTAAAGGCGCG 59.275 55.000 0.00 0.00 38.96 6.86
744 745 0.725117 CTGTTAAGGTAAAGGCGCGG 59.275 55.000 8.83 0.00 0.00 6.46
745 746 1.300266 TGTTAAGGTAAAGGCGCGGC 61.300 55.000 27.06 27.06 0.00 6.53
746 747 1.003597 TTAAGGTAAAGGCGCGGCA 60.004 52.632 34.94 11.82 0.00 5.69
747 748 0.605860 TTAAGGTAAAGGCGCGGCAA 60.606 50.000 34.94 16.78 0.00 4.52
748 749 0.393267 TAAGGTAAAGGCGCGGCAAT 60.393 50.000 34.94 23.87 0.00 3.56
749 750 1.248101 AAGGTAAAGGCGCGGCAATT 61.248 50.000 34.94 28.17 0.00 2.32
750 751 0.393267 AGGTAAAGGCGCGGCAATTA 60.393 50.000 34.94 27.14 0.00 1.40
751 752 0.028902 GGTAAAGGCGCGGCAATTAG 59.971 55.000 34.94 0.00 0.00 1.73
752 753 0.028902 GTAAAGGCGCGGCAATTAGG 59.971 55.000 34.94 0.00 0.00 2.69
753 754 0.107606 TAAAGGCGCGGCAATTAGGA 60.108 50.000 34.94 11.34 0.00 2.94
754 755 1.376609 AAAGGCGCGGCAATTAGGAG 61.377 55.000 34.94 0.00 0.00 3.69
755 756 3.279875 GGCGCGGCAATTAGGAGG 61.280 66.667 29.32 0.00 0.00 4.30
756 757 2.513897 GCGCGGCAATTAGGAGGT 60.514 61.111 8.83 0.00 0.00 3.85
757 758 2.534903 GCGCGGCAATTAGGAGGTC 61.535 63.158 8.83 0.00 0.00 3.85
758 759 1.144057 CGCGGCAATTAGGAGGTCT 59.856 57.895 0.00 0.00 0.00 3.85
759 760 0.876342 CGCGGCAATTAGGAGGTCTC 60.876 60.000 0.00 0.00 0.00 3.36
760 761 0.876342 GCGGCAATTAGGAGGTCTCG 60.876 60.000 0.00 0.00 0.00 4.04
761 762 0.876342 CGGCAATTAGGAGGTCTCGC 60.876 60.000 0.00 0.00 0.00 5.03
762 763 0.876342 GGCAATTAGGAGGTCTCGCG 60.876 60.000 0.00 0.00 0.00 5.87
763 764 0.876342 GCAATTAGGAGGTCTCGCGG 60.876 60.000 6.13 0.00 0.00 6.46
764 765 0.460311 CAATTAGGAGGTCTCGCGGT 59.540 55.000 6.13 0.00 0.00 5.68
765 766 0.745468 AATTAGGAGGTCTCGCGGTC 59.255 55.000 6.13 0.00 0.00 4.79
766 767 1.108132 ATTAGGAGGTCTCGCGGTCC 61.108 60.000 6.13 6.65 0.00 4.46
767 768 2.488771 TTAGGAGGTCTCGCGGTCCA 62.489 60.000 6.13 0.00 0.00 4.02
768 769 2.488771 TAGGAGGTCTCGCGGTCCAA 62.489 60.000 6.13 0.00 0.00 3.53
769 770 2.654877 GAGGTCTCGCGGTCCAAA 59.345 61.111 6.13 0.00 0.00 3.28
770 771 1.737008 GAGGTCTCGCGGTCCAAAC 60.737 63.158 6.13 0.00 0.00 2.93
771 772 2.156051 GAGGTCTCGCGGTCCAAACT 62.156 60.000 6.13 0.00 0.00 2.66
772 773 1.737008 GGTCTCGCGGTCCAAACTC 60.737 63.158 6.13 0.00 0.00 3.01
773 774 1.737008 GTCTCGCGGTCCAAACTCC 60.737 63.158 6.13 0.00 0.00 3.85
774 775 2.204461 TCTCGCGGTCCAAACTCCA 61.204 57.895 6.13 0.00 0.00 3.86
775 776 1.738099 CTCGCGGTCCAAACTCCAG 60.738 63.158 6.13 0.00 0.00 3.86
776 777 2.154798 CTCGCGGTCCAAACTCCAGA 62.155 60.000 6.13 0.00 0.00 3.86
777 778 1.079127 CGCGGTCCAAACTCCAGAT 60.079 57.895 0.00 0.00 0.00 2.90
778 779 1.084370 CGCGGTCCAAACTCCAGATC 61.084 60.000 0.00 0.00 0.00 2.75
779 780 1.084370 GCGGTCCAAACTCCAGATCG 61.084 60.000 0.00 0.00 37.20 3.69
780 781 0.530744 CGGTCCAAACTCCAGATCGA 59.469 55.000 0.00 0.00 36.22 3.59
781 782 1.137086 CGGTCCAAACTCCAGATCGAT 59.863 52.381 0.00 0.00 36.22 3.59
782 783 2.361119 CGGTCCAAACTCCAGATCGATA 59.639 50.000 0.00 0.00 36.22 2.92
783 784 3.181479 CGGTCCAAACTCCAGATCGATAA 60.181 47.826 0.00 0.00 36.22 1.75
784 785 4.120589 GGTCCAAACTCCAGATCGATAAC 58.879 47.826 0.00 0.00 0.00 1.89
785 786 4.120589 GTCCAAACTCCAGATCGATAACC 58.879 47.826 0.00 0.00 0.00 2.85
786 787 3.772572 TCCAAACTCCAGATCGATAACCA 59.227 43.478 0.00 0.00 0.00 3.67
787 788 3.871594 CCAAACTCCAGATCGATAACCAC 59.128 47.826 0.00 0.00 0.00 4.16
788 789 3.821421 AACTCCAGATCGATAACCACC 57.179 47.619 0.00 0.00 0.00 4.61
789 790 3.033659 ACTCCAGATCGATAACCACCT 57.966 47.619 0.00 0.00 0.00 4.00
790 791 2.695666 ACTCCAGATCGATAACCACCTG 59.304 50.000 0.00 0.00 0.00 4.00
791 792 2.695666 CTCCAGATCGATAACCACCTGT 59.304 50.000 0.00 0.00 0.00 4.00
792 793 3.889538 CTCCAGATCGATAACCACCTGTA 59.110 47.826 0.00 0.00 0.00 2.74
793 794 4.480115 TCCAGATCGATAACCACCTGTAT 58.520 43.478 0.00 0.00 0.00 2.29
794 795 4.523173 TCCAGATCGATAACCACCTGTATC 59.477 45.833 0.00 0.00 0.00 2.24
795 796 4.322049 CCAGATCGATAACCACCTGTATCC 60.322 50.000 0.00 0.00 0.00 2.59
796 797 3.506455 AGATCGATAACCACCTGTATCCG 59.494 47.826 0.00 0.00 0.00 4.18
797 798 2.658285 TCGATAACCACCTGTATCCGT 58.342 47.619 0.00 0.00 0.00 4.69
798 799 2.620115 TCGATAACCACCTGTATCCGTC 59.380 50.000 0.00 0.00 0.00 4.79
799 800 2.621998 CGATAACCACCTGTATCCGTCT 59.378 50.000 0.00 0.00 0.00 4.18
800 801 3.304525 CGATAACCACCTGTATCCGTCTC 60.305 52.174 0.00 0.00 0.00 3.36
801 802 1.933021 AACCACCTGTATCCGTCTCA 58.067 50.000 0.00 0.00 0.00 3.27
802 803 1.933021 ACCACCTGTATCCGTCTCAA 58.067 50.000 0.00 0.00 0.00 3.02
803 804 2.253610 ACCACCTGTATCCGTCTCAAA 58.746 47.619 0.00 0.00 0.00 2.69
804 805 2.635915 ACCACCTGTATCCGTCTCAAAA 59.364 45.455 0.00 0.00 0.00 2.44
805 806 3.071892 ACCACCTGTATCCGTCTCAAAAA 59.928 43.478 0.00 0.00 0.00 1.94
832 833 0.255318 ACGTATCCGTCTGGGTCTCT 59.745 55.000 0.00 0.00 46.28 3.10
839 840 3.752665 TCCGTCTGGGTCTCTATATGTC 58.247 50.000 0.00 0.00 37.00 3.06
841 842 3.504134 CCGTCTGGGTCTCTATATGTCAG 59.496 52.174 0.00 0.00 0.00 3.51
852 853 1.696063 ATATGTCAGGTGCATTGCCC 58.304 50.000 6.12 7.10 0.00 5.36
873 874 4.891992 CGTAGGTTTCAGGGATCCATAT 57.108 45.455 15.23 0.00 0.00 1.78
905 907 2.202756 CACGACCGAAGCCCTAGC 60.203 66.667 0.00 0.00 40.32 3.42
912 914 1.219124 CGAAGCCCTAGCAGAAGCA 59.781 57.895 0.00 0.00 45.49 3.91
1021 1028 0.108472 GGTAAACCCTCGTTCCTCCG 60.108 60.000 0.00 0.00 0.00 4.63
1036 1050 0.460311 CTCCGGACCATAACGAAGCT 59.540 55.000 0.00 0.00 0.00 3.74
1054 1068 1.270147 GCTCCCCGCGTAGATAAACAT 60.270 52.381 4.92 0.00 0.00 2.71
1062 1076 3.734231 CGCGTAGATAAACATTGACCGAT 59.266 43.478 0.00 0.00 0.00 4.18
1067 1081 5.734855 AGATAAACATTGACCGATTTCCG 57.265 39.130 0.00 0.00 38.18 4.30
1151 2272 4.697756 CCGGCAGCGGGAAACAGA 62.698 66.667 13.88 0.00 0.00 3.41
1175 2296 5.251764 AGCAGAAGAAGAAGGTACGTAGTA 58.748 41.667 0.00 0.00 45.11 1.82
1198 2327 0.318275 GCTAGTCCAAGCGATCTCCG 60.318 60.000 0.00 0.00 42.21 4.63
1199 2328 0.312416 CTAGTCCAAGCGATCTCCGG 59.688 60.000 0.00 0.00 39.04 5.14
1201 2330 3.154473 TCCAAGCGATCTCCGGGG 61.154 66.667 0.00 0.00 39.04 5.73
1213 2343 3.622166 TCTCCGGGGTGAATTTACTTC 57.378 47.619 0.00 0.00 0.00 3.01
1412 4285 4.077180 ACCCCCTCCGTCCTCTCC 62.077 72.222 0.00 0.00 0.00 3.71
1500 4373 2.086094 TGCACAGCTTACACATGATGG 58.914 47.619 0.00 0.00 0.00 3.51
1520 4393 3.648067 TGGTTGTCTGAAGATCTCACCTT 59.352 43.478 0.00 0.00 0.00 3.50
1521 4394 3.999663 GGTTGTCTGAAGATCTCACCTTG 59.000 47.826 0.00 0.00 0.00 3.61
1547 4426 5.241064 GCATTATCTTCCTGCAGATCAATGT 59.759 40.000 17.39 0.00 35.08 2.71
1576 4467 2.122768 CTAAGAGGGGCATCAAGGACT 58.877 52.381 0.00 0.00 0.00 3.85
1601 4492 2.691252 AAGGGGGCTCGTAAGGGG 60.691 66.667 0.00 0.00 39.30 4.79
1602 4493 3.262778 AAGGGGGCTCGTAAGGGGA 62.263 63.158 0.00 0.00 39.30 4.81
1608 4499 1.255667 GGCTCGTAAGGGGAGTGTCA 61.256 60.000 0.00 0.00 39.30 3.58
1665 4556 5.063438 CACCAATGTACCATCGAGTTAGTTG 59.937 44.000 0.00 0.00 0.00 3.16
1688 4585 4.584327 ATTTGCTAGTGGCGTTTTTCTT 57.416 36.364 0.00 0.00 45.43 2.52
1707 4604 6.869206 TTCTTGTCCAGTACTAGGCTAATT 57.131 37.500 0.00 0.00 32.49 1.40
1711 4608 8.005388 TCTTGTCCAGTACTAGGCTAATTAGAT 58.995 37.037 16.85 6.29 32.49 1.98
1712 4609 7.526142 TGTCCAGTACTAGGCTAATTAGATG 57.474 40.000 16.85 5.05 0.00 2.90
1713 4610 7.295340 TGTCCAGTACTAGGCTAATTAGATGA 58.705 38.462 16.85 0.00 0.00 2.92
1788 4698 7.677454 TCTTCAGTCAGTACGAATAGTGTTA 57.323 36.000 0.00 0.00 33.93 2.41
1927 4889 7.469456 GCCAGGTTTTTCAGTATTGACTTTGTA 60.469 37.037 0.00 0.00 31.73 2.41
1956 5140 7.199541 AGAGAATTGACTTCTGTTGTGATTG 57.800 36.000 0.00 0.00 44.42 2.67
2009 5193 6.172630 ACCATGAAAACCTGAAAATATTGGC 58.827 36.000 0.00 0.00 0.00 4.52
2013 5197 6.630071 TGAAAACCTGAAAATATTGGCTAGC 58.370 36.000 6.04 6.04 0.00 3.42
2015 5199 3.566351 ACCTGAAAATATTGGCTAGCCC 58.434 45.455 30.81 13.08 34.56 5.19
2071 5258 7.387397 TGCAAACAAAATTATCACAATCCCTTC 59.613 33.333 0.00 0.00 0.00 3.46
2088 5275 2.356382 CCTTCCGCGTTGGCAATTATAA 59.644 45.455 4.92 0.00 39.92 0.98
2138 5328 7.012421 GCGAAAGGACCAGATCAGTTATAAAAT 59.988 37.037 0.00 0.00 0.00 1.82
2199 5403 0.109458 CGTCGAGATTCCACCGAACA 60.109 55.000 0.00 0.00 33.91 3.18
2214 5418 1.343506 GAACAACCACTACTACCGCG 58.656 55.000 0.00 0.00 0.00 6.46
2220 5424 1.404391 ACCACTACTACCGCGAGAATG 59.596 52.381 8.23 0.00 0.00 2.67
2307 5511 4.264253 CATGGATCTAAAGCACCTGACAA 58.736 43.478 0.00 0.00 0.00 3.18
2320 5524 4.111916 CACCTGACAACAAATTTCACCAC 58.888 43.478 0.00 0.00 0.00 4.16
2325 5529 5.347342 TGACAACAAATTTCACCACATGAC 58.653 37.500 0.00 0.00 36.92 3.06
2331 5535 5.149273 CAAATTTCACCACATGACGAGAAG 58.851 41.667 0.00 0.00 36.92 2.85
2334 5538 1.073964 CACCACATGACGAGAAGCTG 58.926 55.000 0.00 0.00 0.00 4.24
2338 5542 2.158449 CCACATGACGAGAAGCTGAAAC 59.842 50.000 0.00 0.00 0.00 2.78
2348 5552 1.768684 AAGCTGAAACCTCCTCGCCA 61.769 55.000 0.00 0.00 0.00 5.69
2352 5556 0.250295 TGAAACCTCCTCGCCACAAG 60.250 55.000 0.00 0.00 0.00 3.16
2357 5561 3.377656 TCCTCGCCACAAGGAGAC 58.622 61.111 0.00 0.00 38.94 3.36
2358 5562 1.533033 TCCTCGCCACAAGGAGACA 60.533 57.895 0.00 0.00 38.94 3.41
2363 5567 0.737715 CGCCACAAGGAGACAGTAGC 60.738 60.000 0.00 0.00 36.74 3.58
2370 5574 5.105752 CACAAGGAGACAGTAGCAATCTAC 58.894 45.833 0.00 0.00 44.27 2.59
2378 5582 0.940047 GTAGCAATCTACGCCGGAGC 60.940 60.000 5.05 0.00 36.22 4.70
2398 5602 1.680338 GAGTGGTGCTCAGTTTGGTT 58.320 50.000 0.00 0.00 43.58 3.67
2400 5604 1.102978 GTGGTGCTCAGTTTGGTTGT 58.897 50.000 0.00 0.00 0.00 3.32
2412 5616 2.163818 TTGGTTGTACTTGAGCCTCG 57.836 50.000 0.00 0.00 0.00 4.63
2413 5617 0.320421 TGGTTGTACTTGAGCCTCGC 60.320 55.000 0.00 0.00 0.00 5.03
2420 5624 1.848652 ACTTGAGCCTCGCCTAACTA 58.151 50.000 0.00 0.00 0.00 2.24
2421 5625 1.751924 ACTTGAGCCTCGCCTAACTAG 59.248 52.381 0.00 0.00 0.00 2.57
2422 5626 1.067821 CTTGAGCCTCGCCTAACTAGG 59.932 57.143 0.00 0.00 46.42 3.02
2423 5627 0.033405 TGAGCCTCGCCTAACTAGGT 60.033 55.000 4.72 0.00 45.42 3.08
2424 5628 1.112950 GAGCCTCGCCTAACTAGGTT 58.887 55.000 4.72 0.00 45.42 3.50
2425 5629 1.481363 GAGCCTCGCCTAACTAGGTTT 59.519 52.381 4.72 0.00 45.42 3.27
2426 5630 1.907255 AGCCTCGCCTAACTAGGTTTT 59.093 47.619 4.72 0.00 45.42 2.43
2427 5631 2.093606 AGCCTCGCCTAACTAGGTTTTC 60.094 50.000 4.72 0.00 45.42 2.29
2428 5632 2.537401 CCTCGCCTAACTAGGTTTTCG 58.463 52.381 4.72 0.26 45.42 3.46
2429 5633 2.537401 CTCGCCTAACTAGGTTTTCGG 58.463 52.381 4.72 0.00 45.42 4.30
2430 5634 1.205417 TCGCCTAACTAGGTTTTCGGG 59.795 52.381 4.72 0.00 45.42 5.14
2431 5635 1.066645 CGCCTAACTAGGTTTTCGGGT 60.067 52.381 4.72 0.00 45.42 5.28
2432 5636 2.625737 GCCTAACTAGGTTTTCGGGTC 58.374 52.381 4.72 0.00 45.42 4.46
2433 5637 2.235650 GCCTAACTAGGTTTTCGGGTCT 59.764 50.000 4.72 0.00 45.42 3.85
2434 5638 3.448660 GCCTAACTAGGTTTTCGGGTCTA 59.551 47.826 4.72 0.00 45.42 2.59
2435 5639 4.441217 GCCTAACTAGGTTTTCGGGTCTAG 60.441 50.000 4.72 0.00 45.42 2.43
2436 5640 4.708909 CCTAACTAGGTTTTCGGGTCTAGT 59.291 45.833 0.00 0.00 42.71 2.57
2438 5642 5.557576 AACTAGGTTTTCGGGTCTAGTTT 57.442 39.130 8.30 0.00 45.32 2.66
2439 5643 5.557576 ACTAGGTTTTCGGGTCTAGTTTT 57.442 39.130 0.00 0.00 39.25 2.43
2440 5644 5.545588 ACTAGGTTTTCGGGTCTAGTTTTC 58.454 41.667 0.00 0.00 39.25 2.29
2441 5645 3.748083 AGGTTTTCGGGTCTAGTTTTCC 58.252 45.455 0.00 0.00 0.00 3.13
2442 5646 3.393609 AGGTTTTCGGGTCTAGTTTTCCT 59.606 43.478 0.00 0.00 0.00 3.36
2443 5647 4.139786 GGTTTTCGGGTCTAGTTTTCCTT 58.860 43.478 0.00 0.00 0.00 3.36
2444 5648 5.072193 AGGTTTTCGGGTCTAGTTTTCCTTA 59.928 40.000 0.00 0.00 0.00 2.69
2445 5649 5.942236 GGTTTTCGGGTCTAGTTTTCCTTAT 59.058 40.000 0.00 0.00 0.00 1.73
2446 5650 7.038088 AGGTTTTCGGGTCTAGTTTTCCTTATA 60.038 37.037 0.00 0.00 0.00 0.98
2447 5651 7.607607 GGTTTTCGGGTCTAGTTTTCCTTATAA 59.392 37.037 0.00 0.00 0.00 0.98
2448 5652 9.002600 GTTTTCGGGTCTAGTTTTCCTTATAAA 57.997 33.333 0.00 0.00 0.00 1.40
2449 5653 8.552083 TTTCGGGTCTAGTTTTCCTTATAAAC 57.448 34.615 0.00 0.00 36.08 2.01
2450 5654 7.486407 TCGGGTCTAGTTTTCCTTATAAACT 57.514 36.000 0.00 0.00 45.19 2.66
2451 5655 7.325694 TCGGGTCTAGTTTTCCTTATAAACTG 58.674 38.462 10.35 2.80 43.58 3.16
2452 5656 6.537660 CGGGTCTAGTTTTCCTTATAAACTGG 59.462 42.308 10.35 8.01 43.58 4.00
2453 5657 7.580109 CGGGTCTAGTTTTCCTTATAAACTGGA 60.580 40.741 9.51 9.51 45.10 3.86
2456 5660 8.209802 TCTAGTTTTCCTTATAAACTGGACCA 57.790 34.615 9.51 0.00 43.58 4.02
2457 5661 8.662255 TCTAGTTTTCCTTATAAACTGGACCAA 58.338 33.333 9.51 0.00 43.58 3.67
2458 5662 9.292195 CTAGTTTTCCTTATAAACTGGACCAAA 57.708 33.333 10.35 0.00 42.97 3.28
2459 5663 7.948357 AGTTTTCCTTATAAACTGGACCAAAC 58.052 34.615 0.00 9.48 42.54 2.93
2460 5664 7.783119 AGTTTTCCTTATAAACTGGACCAAACT 59.217 33.333 12.20 12.20 42.54 2.66
2461 5665 7.754851 TTTCCTTATAAACTGGACCAAACTC 57.245 36.000 0.00 0.00 0.00 3.01
2462 5666 6.697641 TCCTTATAAACTGGACCAAACTCT 57.302 37.500 0.00 0.00 0.00 3.24
2463 5667 6.708285 TCCTTATAAACTGGACCAAACTCTC 58.292 40.000 0.00 0.00 0.00 3.20
2464 5668 6.500751 TCCTTATAAACTGGACCAAACTCTCT 59.499 38.462 0.00 0.00 0.00 3.10
2465 5669 7.017254 TCCTTATAAACTGGACCAAACTCTCTT 59.983 37.037 0.00 0.00 0.00 2.85
2466 5670 8.319146 CCTTATAAACTGGACCAAACTCTCTTA 58.681 37.037 0.00 0.00 0.00 2.10
2467 5671 9.892130 CTTATAAACTGGACCAAACTCTCTTAT 57.108 33.333 0.00 0.00 0.00 1.73
2469 5673 8.794335 ATAAACTGGACCAAACTCTCTTATTC 57.206 34.615 0.00 0.00 0.00 1.75
2470 5674 6.441088 AACTGGACCAAACTCTCTTATTCT 57.559 37.500 0.00 0.00 0.00 2.40
2471 5675 6.441088 ACTGGACCAAACTCTCTTATTCTT 57.559 37.500 0.00 0.00 0.00 2.52
2472 5676 7.554959 ACTGGACCAAACTCTCTTATTCTTA 57.445 36.000 0.00 0.00 0.00 2.10
2473 5677 7.974504 ACTGGACCAAACTCTCTTATTCTTAA 58.025 34.615 0.00 0.00 0.00 1.85
2474 5678 8.606830 ACTGGACCAAACTCTCTTATTCTTAAT 58.393 33.333 0.00 0.00 0.00 1.40
2475 5679 9.103861 CTGGACCAAACTCTCTTATTCTTAATC 57.896 37.037 0.00 0.00 0.00 1.75
2476 5680 8.602424 TGGACCAAACTCTCTTATTCTTAATCA 58.398 33.333 0.00 0.00 0.00 2.57
2477 5681 9.449719 GGACCAAACTCTCTTATTCTTAATCAA 57.550 33.333 0.00 0.00 0.00 2.57
2484 5688 9.118300 ACTCTCTTATTCTTAATCAAATGCAGG 57.882 33.333 0.00 0.00 0.00 4.85
2485 5689 9.334947 CTCTCTTATTCTTAATCAAATGCAGGA 57.665 33.333 0.00 0.00 0.00 3.86
2486 5690 9.685276 TCTCTTATTCTTAATCAAATGCAGGAA 57.315 29.630 0.00 0.00 0.00 3.36
2487 5691 9.727627 CTCTTATTCTTAATCAAATGCAGGAAC 57.272 33.333 0.00 0.00 0.00 3.62
2488 5692 8.686334 TCTTATTCTTAATCAAATGCAGGAACC 58.314 33.333 0.00 0.00 0.00 3.62
2489 5693 5.659440 TTCTTAATCAAATGCAGGAACCC 57.341 39.130 0.00 0.00 0.00 4.11
2490 5694 4.023291 TCTTAATCAAATGCAGGAACCCC 58.977 43.478 0.00 0.00 0.00 4.95
2491 5695 1.571955 AATCAAATGCAGGAACCCCC 58.428 50.000 0.00 0.00 0.00 5.40
2499 5703 2.547448 AGGAACCCCCTGCCCTAA 59.453 61.111 0.00 0.00 45.61 2.69
2500 5704 1.929088 AGGAACCCCCTGCCCTAAC 60.929 63.158 0.00 0.00 45.61 2.34
2501 5705 2.235761 GGAACCCCCTGCCCTAACA 61.236 63.158 0.00 0.00 0.00 2.41
2502 5706 1.001269 GAACCCCCTGCCCTAACAC 60.001 63.158 0.00 0.00 0.00 3.32
2503 5707 2.814913 GAACCCCCTGCCCTAACACG 62.815 65.000 0.00 0.00 0.00 4.49
2504 5708 3.006728 CCCCCTGCCCTAACACGA 61.007 66.667 0.00 0.00 0.00 4.35
2505 5709 2.584608 CCCCTGCCCTAACACGAG 59.415 66.667 0.00 0.00 0.00 4.18
2506 5710 2.584608 CCCTGCCCTAACACGAGG 59.415 66.667 0.00 0.00 36.23 4.63
2507 5711 2.291043 CCCTGCCCTAACACGAGGT 61.291 63.158 0.00 0.00 34.45 3.85
2508 5712 1.677552 CCTGCCCTAACACGAGGTT 59.322 57.895 0.00 0.00 43.62 3.50
2509 5713 0.036306 CCTGCCCTAACACGAGGTTT 59.964 55.000 0.00 0.00 40.96 3.27
2510 5714 1.276989 CCTGCCCTAACACGAGGTTTA 59.723 52.381 0.00 0.00 40.96 2.01
2511 5715 2.093128 CCTGCCCTAACACGAGGTTTAT 60.093 50.000 0.00 0.00 40.96 1.40
2512 5716 3.195661 CTGCCCTAACACGAGGTTTATC 58.804 50.000 0.00 0.00 40.96 1.75
2513 5717 2.568062 TGCCCTAACACGAGGTTTATCA 59.432 45.455 0.00 0.00 40.96 2.15
2514 5718 2.934553 GCCCTAACACGAGGTTTATCAC 59.065 50.000 0.00 0.00 40.96 3.06
2515 5719 3.618019 GCCCTAACACGAGGTTTATCACA 60.618 47.826 0.00 0.00 40.96 3.58
2516 5720 4.571919 CCCTAACACGAGGTTTATCACAA 58.428 43.478 0.00 0.00 40.96 3.33
2517 5721 4.998672 CCCTAACACGAGGTTTATCACAAA 59.001 41.667 0.00 0.00 40.96 2.83
2518 5722 5.470777 CCCTAACACGAGGTTTATCACAAAA 59.529 40.000 0.00 0.00 40.96 2.44
2519 5723 6.016943 CCCTAACACGAGGTTTATCACAAAAA 60.017 38.462 0.00 0.00 40.96 1.94
2540 5744 2.220479 AAAGTAATCTACGCCGGAGC 57.780 50.000 5.05 0.00 0.00 4.70
2541 5745 1.400737 AAGTAATCTACGCCGGAGCT 58.599 50.000 5.05 0.00 36.60 4.09
2542 5746 0.953003 AGTAATCTACGCCGGAGCTC 59.047 55.000 5.05 4.71 36.60 4.09
2543 5747 0.039346 GTAATCTACGCCGGAGCTCC 60.039 60.000 23.79 23.79 36.60 4.70
2568 5772 7.447243 GTGTACTACGTCCAAATAGATGAAC 57.553 40.000 0.00 0.00 0.00 3.18
2569 5773 7.256286 GTGTACTACGTCCAAATAGATGAACT 58.744 38.462 0.00 0.00 0.00 3.01
2570 5774 7.431668 GTGTACTACGTCCAAATAGATGAACTC 59.568 40.741 0.00 0.00 0.00 3.01
2571 5775 5.579718 ACTACGTCCAAATAGATGAACTCG 58.420 41.667 0.00 0.00 0.00 4.18
2572 5776 4.713824 ACGTCCAAATAGATGAACTCGA 57.286 40.909 0.00 0.00 0.00 4.04
2573 5777 4.673441 ACGTCCAAATAGATGAACTCGAG 58.327 43.478 11.84 11.84 0.00 4.04
2574 5778 4.045104 CGTCCAAATAGATGAACTCGAGG 58.955 47.826 18.41 0.00 0.00 4.63
2575 5779 4.202020 CGTCCAAATAGATGAACTCGAGGA 60.202 45.833 18.41 0.00 0.00 3.71
2576 5780 5.285651 GTCCAAATAGATGAACTCGAGGAG 58.714 45.833 18.41 0.00 35.52 3.69
2577 5781 4.342378 TCCAAATAGATGAACTCGAGGAGG 59.658 45.833 18.41 1.95 33.35 4.30
2578 5782 4.342378 CCAAATAGATGAACTCGAGGAGGA 59.658 45.833 18.41 0.00 33.35 3.71
2579 5783 5.011533 CCAAATAGATGAACTCGAGGAGGAT 59.988 44.000 18.41 2.75 33.35 3.24
2580 5784 5.975693 AATAGATGAACTCGAGGAGGATC 57.024 43.478 18.41 11.84 33.35 3.36
2581 5785 2.226330 AGATGAACTCGAGGAGGATCG 58.774 52.381 18.41 0.00 44.07 3.69
2589 5793 0.665835 CGAGGAGGATCGAAGTCTGG 59.334 60.000 0.00 0.00 45.56 3.86
2590 5794 1.747552 CGAGGAGGATCGAAGTCTGGA 60.748 57.143 0.00 0.00 45.56 3.86
2591 5795 2.379972 GAGGAGGATCGAAGTCTGGAA 58.620 52.381 0.00 0.00 34.37 3.53
2592 5796 2.360801 GAGGAGGATCGAAGTCTGGAAG 59.639 54.545 0.00 0.00 34.37 3.46
2593 5797 2.024846 AGGAGGATCGAAGTCTGGAAGA 60.025 50.000 0.00 0.00 36.66 2.87
2611 5815 9.057089 TCTGGAAGACAATCTTAAAGAAGAAAC 57.943 33.333 0.00 0.00 41.14 2.78
2612 5816 8.746052 TGGAAGACAATCTTAAAGAAGAAACA 57.254 30.769 0.00 0.00 44.85 2.83
2613 5817 8.621286 TGGAAGACAATCTTAAAGAAGAAACAC 58.379 33.333 0.00 0.00 44.85 3.32
2614 5818 8.076781 GGAAGACAATCTTAAAGAAGAAACACC 58.923 37.037 0.00 0.00 44.85 4.16
2615 5819 7.511959 AGACAATCTTAAAGAAGAAACACCC 57.488 36.000 0.00 0.00 44.85 4.61
2616 5820 7.060421 AGACAATCTTAAAGAAGAAACACCCA 58.940 34.615 0.00 0.00 44.85 4.51
2617 5821 7.013369 AGACAATCTTAAAGAAGAAACACCCAC 59.987 37.037 0.00 0.00 44.85 4.61
2618 5822 6.833933 ACAATCTTAAAGAAGAAACACCCACT 59.166 34.615 0.00 0.00 44.85 4.00
2619 5823 7.996644 ACAATCTTAAAGAAGAAACACCCACTA 59.003 33.333 0.00 0.00 44.85 2.74
2620 5824 8.507249 CAATCTTAAAGAAGAAACACCCACTAG 58.493 37.037 0.00 0.00 44.85 2.57
2621 5825 7.133133 TCTTAAAGAAGAAACACCCACTAGT 57.867 36.000 0.00 0.00 38.80 2.57
2622 5826 6.990349 TCTTAAAGAAGAAACACCCACTAGTG 59.010 38.462 16.34 16.34 38.80 2.74
2623 5827 3.127425 AGAAGAAACACCCACTAGTGC 57.873 47.619 17.86 1.81 41.67 4.40
2624 5828 2.438021 AGAAGAAACACCCACTAGTGCA 59.562 45.455 17.86 0.00 41.67 4.57
2625 5829 2.550830 AGAAACACCCACTAGTGCAG 57.449 50.000 17.86 12.88 41.67 4.41
2626 5830 2.047061 AGAAACACCCACTAGTGCAGA 58.953 47.619 17.86 0.00 41.67 4.26
2627 5831 2.438021 AGAAACACCCACTAGTGCAGAA 59.562 45.455 17.86 0.00 41.67 3.02
2628 5832 2.256117 AACACCCACTAGTGCAGAAC 57.744 50.000 17.86 0.00 41.67 3.01
2629 5833 0.396811 ACACCCACTAGTGCAGAACC 59.603 55.000 17.86 0.00 41.67 3.62
2630 5834 0.670546 CACCCACTAGTGCAGAACCG 60.671 60.000 17.86 1.75 0.00 4.44
2631 5835 1.079127 CCCACTAGTGCAGAACCGG 60.079 63.158 17.86 0.00 0.00 5.28
2632 5836 1.741770 CCACTAGTGCAGAACCGGC 60.742 63.158 17.86 0.00 0.00 6.13
2633 5837 1.741770 CACTAGTGCAGAACCGGCC 60.742 63.158 10.54 0.00 0.00 6.13
2634 5838 1.913762 ACTAGTGCAGAACCGGCCT 60.914 57.895 0.00 0.00 0.00 5.19
2635 5839 1.296715 CTAGTGCAGAACCGGCCTT 59.703 57.895 0.00 0.00 0.00 4.35
2636 5840 0.321653 CTAGTGCAGAACCGGCCTTT 60.322 55.000 0.00 0.00 0.00 3.11
2637 5841 0.978151 TAGTGCAGAACCGGCCTTTA 59.022 50.000 0.00 0.00 0.00 1.85
2638 5842 0.321653 AGTGCAGAACCGGCCTTTAG 60.322 55.000 0.00 0.00 0.00 1.85
2639 5843 0.605589 GTGCAGAACCGGCCTTTAGT 60.606 55.000 0.00 0.00 0.00 2.24
2640 5844 0.605319 TGCAGAACCGGCCTTTAGTG 60.605 55.000 0.00 0.00 0.00 2.74
2641 5845 1.923227 GCAGAACCGGCCTTTAGTGC 61.923 60.000 0.00 0.20 0.00 4.40
2642 5846 1.002502 AGAACCGGCCTTTAGTGCC 60.003 57.895 0.00 0.00 45.70 5.01
2647 5851 3.587095 GGCCTTTAGTGCCGGTTC 58.413 61.111 1.90 0.00 39.48 3.62
2648 5852 2.396157 GGCCTTTAGTGCCGGTTCG 61.396 63.158 1.90 0.00 39.48 3.95
2649 5853 1.670083 GCCTTTAGTGCCGGTTCGT 60.670 57.895 1.90 0.00 0.00 3.85
2650 5854 0.390209 GCCTTTAGTGCCGGTTCGTA 60.390 55.000 1.90 0.00 0.00 3.43
2651 5855 1.940752 GCCTTTAGTGCCGGTTCGTAA 60.941 52.381 1.90 0.00 0.00 3.18
2652 5856 1.728425 CCTTTAGTGCCGGTTCGTAAC 59.272 52.381 1.90 0.00 0.00 2.50
2653 5857 1.387756 CTTTAGTGCCGGTTCGTAACG 59.612 52.381 1.90 0.00 0.00 3.18
2658 5862 2.047939 CCGGTTCGTAACGGCCTT 60.048 61.111 5.32 0.00 43.96 4.35
2659 5863 1.668793 CCGGTTCGTAACGGCCTTT 60.669 57.895 5.32 0.00 43.96 3.11
2660 5864 0.389687 CCGGTTCGTAACGGCCTTTA 60.390 55.000 5.32 0.00 43.96 1.85
2661 5865 0.994263 CGGTTCGTAACGGCCTTTAG 59.006 55.000 1.13 0.00 0.00 1.85
2662 5866 1.669795 CGGTTCGTAACGGCCTTTAGT 60.670 52.381 1.13 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 9.124807 GAAAAGAACTTGAGAAAACGAGAAAAA 57.875 29.630 0.00 0.00 0.00 1.94
25 26 8.512138 AGAAAAGAACTTGAGAAAACGAGAAAA 58.488 29.630 0.00 0.00 0.00 2.29
26 27 8.040716 AGAAAAGAACTTGAGAAAACGAGAAA 57.959 30.769 0.00 0.00 0.00 2.52
27 28 7.611213 AGAAAAGAACTTGAGAAAACGAGAA 57.389 32.000 0.00 0.00 0.00 2.87
28 29 7.611213 AAGAAAAGAACTTGAGAAAACGAGA 57.389 32.000 0.00 0.00 0.00 4.04
29 30 8.675040 AAAAGAAAAGAACTTGAGAAAACGAG 57.325 30.769 0.00 0.00 0.00 4.18
91 92 9.982291 GTTCATTAATTTAGAAGATGTACGCAA 57.018 29.630 0.00 0.00 0.00 4.85
92 93 9.157104 TGTTCATTAATTTAGAAGATGTACGCA 57.843 29.630 0.00 0.00 0.00 5.24
129 130 9.689976 TGTTCATGATTTCAAAAATATTCGTGT 57.310 25.926 0.00 0.00 0.00 4.49
216 217 9.483062 CAAACAATCTTTGCGAATTTGTAAAAA 57.517 25.926 9.82 0.00 30.76 1.94
217 218 8.873830 TCAAACAATCTTTGCGAATTTGTAAAA 58.126 25.926 9.82 3.71 30.76 1.52
218 219 8.412608 TCAAACAATCTTTGCGAATTTGTAAA 57.587 26.923 12.93 8.45 30.76 2.01
219 220 7.993821 TCAAACAATCTTTGCGAATTTGTAA 57.006 28.000 12.93 0.00 30.76 2.41
220 221 7.993821 TTCAAACAATCTTTGCGAATTTGTA 57.006 28.000 12.93 1.80 30.76 2.41
221 222 6.900568 TTCAAACAATCTTTGCGAATTTGT 57.099 29.167 8.60 8.60 30.84 2.83
222 223 7.401080 AGTTTCAAACAATCTTTGCGAATTTG 58.599 30.769 2.41 7.59 0.00 2.32
223 224 7.538303 AGTTTCAAACAATCTTTGCGAATTT 57.462 28.000 2.41 0.00 0.00 1.82
224 225 7.064490 ACAAGTTTCAAACAATCTTTGCGAATT 59.936 29.630 2.41 0.00 0.00 2.17
225 226 6.534793 ACAAGTTTCAAACAATCTTTGCGAAT 59.465 30.769 2.41 0.00 0.00 3.34
226 227 5.866633 ACAAGTTTCAAACAATCTTTGCGAA 59.133 32.000 2.41 0.00 0.00 4.70
227 228 5.288232 CACAAGTTTCAAACAATCTTTGCGA 59.712 36.000 2.41 0.00 0.00 5.10
228 229 5.288232 TCACAAGTTTCAAACAATCTTTGCG 59.712 36.000 2.41 0.00 0.00 4.85
229 230 6.645700 TCACAAGTTTCAAACAATCTTTGC 57.354 33.333 2.41 0.00 0.00 3.68
230 231 8.016497 TGTTCACAAGTTTCAAACAATCTTTG 57.984 30.769 2.41 0.49 0.00 2.77
231 232 8.776376 ATGTTCACAAGTTTCAAACAATCTTT 57.224 26.923 2.41 0.00 33.92 2.52
232 233 8.776376 AATGTTCACAAGTTTCAAACAATCTT 57.224 26.923 2.41 0.00 33.92 2.40
233 234 8.776376 AAATGTTCACAAGTTTCAAACAATCT 57.224 26.923 2.41 0.00 33.92 2.40
234 235 9.824534 AAAAATGTTCACAAGTTTCAAACAATC 57.175 25.926 2.41 0.00 33.92 2.67
316 317 8.256611 TCAAAACAATTTGGTCGATTCAAAAA 57.743 26.923 16.84 3.18 44.88 1.94
317 318 7.834068 TCAAAACAATTTGGTCGATTCAAAA 57.166 28.000 16.84 0.38 44.88 2.44
318 319 7.834068 TTCAAAACAATTTGGTCGATTCAAA 57.166 28.000 15.74 15.74 44.88 2.69
319 320 8.430801 AATTCAAAACAATTTGGTCGATTCAA 57.569 26.923 0.78 0.00 44.88 2.69
320 321 8.430801 AAATTCAAAACAATTTGGTCGATTCA 57.569 26.923 0.78 0.00 44.88 2.57
321 322 9.157259 CAAAATTCAAAACAATTTGGTCGATTC 57.843 29.630 0.78 0.00 44.88 2.52
322 323 8.887717 TCAAAATTCAAAACAATTTGGTCGATT 58.112 25.926 0.78 0.00 44.88 3.34
323 324 8.430801 TCAAAATTCAAAACAATTTGGTCGAT 57.569 26.923 0.78 0.00 44.88 3.59
324 325 7.834068 TCAAAATTCAAAACAATTTGGTCGA 57.166 28.000 0.78 0.00 44.88 4.20
343 344 9.645059 TGTGATGTTCAAAAGTTGTTATCAAAA 57.355 25.926 0.00 0.00 35.20 2.44
344 345 9.645059 TTGTGATGTTCAAAAGTTGTTATCAAA 57.355 25.926 0.00 0.00 35.20 2.69
345 346 9.814899 ATTGTGATGTTCAAAAGTTGTTATCAA 57.185 25.926 0.00 0.00 32.16 2.57
346 347 9.814899 AATTGTGATGTTCAAAAGTTGTTATCA 57.185 25.926 0.00 0.00 25.19 2.15
348 349 9.260002 GGAATTGTGATGTTCAAAAGTTGTTAT 57.740 29.630 0.00 0.00 25.19 1.89
349 350 8.474025 AGGAATTGTGATGTTCAAAAGTTGTTA 58.526 29.630 0.00 0.00 25.19 2.41
350 351 7.330262 AGGAATTGTGATGTTCAAAAGTTGTT 58.670 30.769 0.00 0.00 25.19 2.83
351 352 6.877236 AGGAATTGTGATGTTCAAAAGTTGT 58.123 32.000 0.00 0.00 25.19 3.32
352 353 7.775397 AAGGAATTGTGATGTTCAAAAGTTG 57.225 32.000 0.00 0.00 25.19 3.16
353 354 8.791327 AAAAGGAATTGTGATGTTCAAAAGTT 57.209 26.923 0.00 0.00 25.19 2.66
354 355 8.791327 AAAAAGGAATTGTGATGTTCAAAAGT 57.209 26.923 0.00 0.00 25.19 2.66
462 463 9.980780 CAAATTTTGTTCGGTACTTTGATTTTT 57.019 25.926 0.78 0.00 0.00 1.94
463 464 9.372369 TCAAATTTTGTTCGGTACTTTGATTTT 57.628 25.926 8.89 0.00 28.19 1.82
464 465 8.934507 TCAAATTTTGTTCGGTACTTTGATTT 57.065 26.923 8.89 0.00 28.19 2.17
465 466 8.934507 TTCAAATTTTGTTCGGTACTTTGATT 57.065 26.923 8.89 0.00 31.38 2.57
466 467 8.934507 TTTCAAATTTTGTTCGGTACTTTGAT 57.065 26.923 8.89 0.00 31.38 2.57
467 468 8.934507 ATTTCAAATTTTGTTCGGTACTTTGA 57.065 26.923 8.89 0.00 30.09 2.69
468 469 9.631639 GAATTTCAAATTTTGTTCGGTACTTTG 57.368 29.630 8.89 0.00 0.00 2.77
469 470 9.372369 TGAATTTCAAATTTTGTTCGGTACTTT 57.628 25.926 8.89 0.00 0.00 2.66
470 471 8.934507 TGAATTTCAAATTTTGTTCGGTACTT 57.065 26.923 8.89 0.00 0.00 2.24
471 472 8.977505 CATGAATTTCAAATTTTGTTCGGTACT 58.022 29.630 8.89 0.00 0.00 2.73
472 473 8.973378 TCATGAATTTCAAATTTTGTTCGGTAC 58.027 29.630 8.89 0.00 0.00 3.34
473 474 9.534565 TTCATGAATTTCAAATTTTGTTCGGTA 57.465 25.926 3.38 0.00 0.00 4.02
474 475 8.334632 GTTCATGAATTTCAAATTTTGTTCGGT 58.665 29.630 12.12 0.00 0.00 4.69
475 476 8.333908 TGTTCATGAATTTCAAATTTTGTTCGG 58.666 29.630 12.12 3.60 0.00 4.30
476 477 9.866936 ATGTTCATGAATTTCAAATTTTGTTCG 57.133 25.926 12.12 0.00 0.00 3.95
543 544 9.384764 TCGGGAAAAACTGTTTGAAAAATAATT 57.615 25.926 6.53 0.00 0.00 1.40
544 545 8.950208 TCGGGAAAAACTGTTTGAAAAATAAT 57.050 26.923 6.53 0.00 0.00 1.28
545 546 8.773404 TTCGGGAAAAACTGTTTGAAAAATAA 57.227 26.923 6.53 0.00 0.00 1.40
546 547 8.950208 ATTCGGGAAAAACTGTTTGAAAAATA 57.050 26.923 6.53 0.00 0.00 1.40
547 548 7.857734 ATTCGGGAAAAACTGTTTGAAAAAT 57.142 28.000 6.53 0.84 0.00 1.82
548 549 7.412020 CGAATTCGGGAAAAACTGTTTGAAAAA 60.412 33.333 20.16 0.00 35.37 1.94
549 550 6.035112 CGAATTCGGGAAAAACTGTTTGAAAA 59.965 34.615 20.16 0.00 35.37 2.29
550 551 5.517054 CGAATTCGGGAAAAACTGTTTGAAA 59.483 36.000 20.16 0.00 35.37 2.69
551 552 5.038033 CGAATTCGGGAAAAACTGTTTGAA 58.962 37.500 20.16 6.05 35.37 2.69
552 553 4.602995 CGAATTCGGGAAAAACTGTTTGA 58.397 39.130 20.16 0.00 35.37 2.69
553 554 3.181575 GCGAATTCGGGAAAAACTGTTTG 59.818 43.478 27.78 0.00 40.23 2.93
554 555 3.181485 TGCGAATTCGGGAAAAACTGTTT 60.181 39.130 27.78 0.00 40.23 2.83
555 556 2.359531 TGCGAATTCGGGAAAAACTGTT 59.640 40.909 27.78 0.00 40.23 3.16
556 557 1.950909 TGCGAATTCGGGAAAAACTGT 59.049 42.857 27.78 0.00 40.23 3.55
557 558 2.697431 TGCGAATTCGGGAAAAACTG 57.303 45.000 27.78 0.00 40.23 3.16
558 559 3.934457 AATGCGAATTCGGGAAAAACT 57.066 38.095 27.78 0.00 40.23 2.66
559 560 4.983215 AAAATGCGAATTCGGGAAAAAC 57.017 36.364 27.78 10.75 40.23 2.43
620 621 9.775854 TGCATTTCATTTTCCTTTTCATCTTTA 57.224 25.926 0.00 0.00 0.00 1.85
621 622 8.680039 TGCATTTCATTTTCCTTTTCATCTTT 57.320 26.923 0.00 0.00 0.00 2.52
622 623 8.857694 ATGCATTTCATTTTCCTTTTCATCTT 57.142 26.923 0.00 0.00 29.16 2.40
623 624 8.857694 AATGCATTTCATTTTCCTTTTCATCT 57.142 26.923 5.99 0.00 42.48 2.90
632 633 9.264719 CCCTCTATTTAATGCATTTCATTTTCC 57.735 33.333 18.75 0.00 42.48 3.13
633 634 8.768019 GCCCTCTATTTAATGCATTTCATTTTC 58.232 33.333 18.75 0.00 42.48 2.29
634 635 8.266473 TGCCCTCTATTTAATGCATTTCATTTT 58.734 29.630 18.75 0.00 42.48 1.82
635 636 7.794041 TGCCCTCTATTTAATGCATTTCATTT 58.206 30.769 18.75 0.00 42.48 2.32
636 637 7.364149 TGCCCTCTATTTAATGCATTTCATT 57.636 32.000 18.75 4.34 46.48 2.57
637 638 6.982160 TGCCCTCTATTTAATGCATTTCAT 57.018 33.333 18.75 12.18 36.87 2.57
638 639 6.015180 GGATGCCCTCTATTTAATGCATTTCA 60.015 38.462 18.75 4.91 39.36 2.69
639 640 6.393171 GGATGCCCTCTATTTAATGCATTTC 58.607 40.000 18.75 3.85 39.36 2.17
640 641 5.246883 GGGATGCCCTCTATTTAATGCATTT 59.753 40.000 18.75 1.86 41.34 2.32
641 642 4.774200 GGGATGCCCTCTATTTAATGCATT 59.226 41.667 17.56 17.56 41.34 3.56
642 643 4.202706 TGGGATGCCCTCTATTTAATGCAT 60.203 41.667 0.00 0.00 45.70 3.96
643 644 3.139957 TGGGATGCCCTCTATTTAATGCA 59.860 43.478 0.00 0.00 45.70 3.96
644 645 3.507622 GTGGGATGCCCTCTATTTAATGC 59.492 47.826 0.00 0.00 45.70 3.56
645 646 4.082125 GGTGGGATGCCCTCTATTTAATG 58.918 47.826 0.00 0.00 45.70 1.90
646 647 3.076032 GGGTGGGATGCCCTCTATTTAAT 59.924 47.826 0.00 0.00 45.70 1.40
647 648 2.445525 GGGTGGGATGCCCTCTATTTAA 59.554 50.000 0.00 0.00 45.70 1.52
648 649 2.062636 GGGTGGGATGCCCTCTATTTA 58.937 52.381 0.00 0.00 45.70 1.40
649 650 0.853530 GGGTGGGATGCCCTCTATTT 59.146 55.000 0.00 0.00 45.70 1.40
650 651 0.328450 TGGGTGGGATGCCCTCTATT 60.328 55.000 0.00 0.00 45.70 1.73
651 652 0.328450 TTGGGTGGGATGCCCTCTAT 60.328 55.000 0.00 0.00 45.70 1.98
652 653 1.083895 TTGGGTGGGATGCCCTCTA 59.916 57.895 0.00 0.00 45.70 2.43
653 654 2.204291 TTGGGTGGGATGCCCTCT 60.204 61.111 0.00 0.00 45.70 3.69
654 655 2.043953 GTTGGGTGGGATGCCCTC 60.044 66.667 0.00 0.00 45.70 4.30
655 656 4.047125 CGTTGGGTGGGATGCCCT 62.047 66.667 0.00 0.00 45.70 5.19
658 659 2.755469 ATGCGTTGGGTGGGATGC 60.755 61.111 0.00 0.00 0.00 3.91
659 660 2.417257 CCATGCGTTGGGTGGGATG 61.417 63.158 0.00 0.00 42.33 3.51
660 661 2.044053 CCATGCGTTGGGTGGGAT 60.044 61.111 0.00 0.00 42.33 3.85
684 685 3.788766 CTCCGCGCGTCCTTTTGG 61.789 66.667 29.95 10.76 42.21 3.28
685 686 4.445545 GCTCCGCGCGTCCTTTTG 62.446 66.667 29.95 11.58 0.00 2.44
711 712 0.179084 TAACAGGCCGCAGACATAGC 60.179 55.000 0.00 0.00 0.00 2.97
712 713 2.205074 CTTAACAGGCCGCAGACATAG 58.795 52.381 0.00 0.00 0.00 2.23
713 714 1.134521 CCTTAACAGGCCGCAGACATA 60.135 52.381 0.00 0.00 31.53 2.29
714 715 0.392998 CCTTAACAGGCCGCAGACAT 60.393 55.000 0.00 0.00 31.53 3.06
715 716 1.003839 CCTTAACAGGCCGCAGACA 60.004 57.895 0.00 0.00 31.53 3.41
716 717 0.248289 TACCTTAACAGGCCGCAGAC 59.752 55.000 0.00 0.00 45.56 3.51
717 718 0.978151 TTACCTTAACAGGCCGCAGA 59.022 50.000 0.00 0.00 45.56 4.26
718 719 1.737793 CTTTACCTTAACAGGCCGCAG 59.262 52.381 0.00 0.00 45.56 5.18
719 720 1.612199 CCTTTACCTTAACAGGCCGCA 60.612 52.381 0.00 0.00 45.56 5.69
720 721 1.092348 CCTTTACCTTAACAGGCCGC 58.908 55.000 0.00 0.00 45.56 6.53
721 722 1.092348 GCCTTTACCTTAACAGGCCG 58.908 55.000 0.00 0.00 45.56 6.13
723 724 0.450583 GCGCCTTTACCTTAACAGGC 59.549 55.000 0.00 0.00 45.56 4.85
725 726 0.725117 CCGCGCCTTTACCTTAACAG 59.275 55.000 0.00 0.00 0.00 3.16
726 727 1.300266 GCCGCGCCTTTACCTTAACA 61.300 55.000 0.00 0.00 0.00 2.41
727 728 1.300266 TGCCGCGCCTTTACCTTAAC 61.300 55.000 0.00 0.00 0.00 2.01
728 729 0.605860 TTGCCGCGCCTTTACCTTAA 60.606 50.000 0.00 0.00 0.00 1.85
729 730 0.393267 ATTGCCGCGCCTTTACCTTA 60.393 50.000 0.00 0.00 0.00 2.69
730 731 1.248101 AATTGCCGCGCCTTTACCTT 61.248 50.000 0.00 0.00 0.00 3.50
731 732 0.393267 TAATTGCCGCGCCTTTACCT 60.393 50.000 0.00 0.00 0.00 3.08
732 733 0.028902 CTAATTGCCGCGCCTTTACC 59.971 55.000 0.00 0.00 0.00 2.85
733 734 0.028902 CCTAATTGCCGCGCCTTTAC 59.971 55.000 0.00 0.00 0.00 2.01
734 735 0.107606 TCCTAATTGCCGCGCCTTTA 60.108 50.000 0.00 0.00 0.00 1.85
735 736 1.376609 CTCCTAATTGCCGCGCCTTT 61.377 55.000 0.00 0.00 0.00 3.11
736 737 1.819632 CTCCTAATTGCCGCGCCTT 60.820 57.895 0.00 0.00 0.00 4.35
737 738 2.203070 CTCCTAATTGCCGCGCCT 60.203 61.111 0.00 0.00 0.00 5.52
738 739 3.279875 CCTCCTAATTGCCGCGCC 61.280 66.667 0.00 0.00 0.00 6.53
739 740 2.513897 ACCTCCTAATTGCCGCGC 60.514 61.111 0.00 0.00 0.00 6.86
740 741 0.876342 GAGACCTCCTAATTGCCGCG 60.876 60.000 0.00 0.00 0.00 6.46
741 742 0.876342 CGAGACCTCCTAATTGCCGC 60.876 60.000 0.00 0.00 0.00 6.53
742 743 0.876342 GCGAGACCTCCTAATTGCCG 60.876 60.000 0.00 0.00 0.00 5.69
743 744 0.876342 CGCGAGACCTCCTAATTGCC 60.876 60.000 0.00 0.00 0.00 4.52
744 745 0.876342 CCGCGAGACCTCCTAATTGC 60.876 60.000 8.23 0.00 0.00 3.56
745 746 0.460311 ACCGCGAGACCTCCTAATTG 59.540 55.000 8.23 0.00 0.00 2.32
746 747 0.745468 GACCGCGAGACCTCCTAATT 59.255 55.000 8.23 0.00 0.00 1.40
747 748 1.108132 GGACCGCGAGACCTCCTAAT 61.108 60.000 8.23 0.00 0.00 1.73
748 749 1.751927 GGACCGCGAGACCTCCTAA 60.752 63.158 8.23 0.00 0.00 2.69
749 750 2.124403 GGACCGCGAGACCTCCTA 60.124 66.667 8.23 0.00 0.00 2.94
750 751 3.881019 TTGGACCGCGAGACCTCCT 62.881 63.158 8.23 0.00 0.00 3.69
751 752 2.939261 TTTGGACCGCGAGACCTCC 61.939 63.158 8.23 3.65 0.00 4.30
752 753 1.737008 GTTTGGACCGCGAGACCTC 60.737 63.158 8.23 0.00 0.00 3.85
753 754 2.156051 GAGTTTGGACCGCGAGACCT 62.156 60.000 8.23 0.00 0.00 3.85
754 755 1.737008 GAGTTTGGACCGCGAGACC 60.737 63.158 8.23 8.48 0.00 3.85
755 756 1.737008 GGAGTTTGGACCGCGAGAC 60.737 63.158 8.23 0.00 0.00 3.36
756 757 2.154798 CTGGAGTTTGGACCGCGAGA 62.155 60.000 8.23 0.00 0.00 4.04
757 758 1.738099 CTGGAGTTTGGACCGCGAG 60.738 63.158 8.23 0.00 0.00 5.03
758 759 1.541310 ATCTGGAGTTTGGACCGCGA 61.541 55.000 8.23 0.00 0.00 5.87
759 760 1.079127 ATCTGGAGTTTGGACCGCG 60.079 57.895 0.00 0.00 0.00 6.46
760 761 1.084370 CGATCTGGAGTTTGGACCGC 61.084 60.000 0.00 0.00 0.00 5.68
761 762 0.530744 TCGATCTGGAGTTTGGACCG 59.469 55.000 0.00 0.00 0.00 4.79
762 763 2.990066 ATCGATCTGGAGTTTGGACC 57.010 50.000 0.00 0.00 0.00 4.46
763 764 4.120589 GGTTATCGATCTGGAGTTTGGAC 58.879 47.826 0.00 0.00 0.00 4.02
764 765 3.772572 TGGTTATCGATCTGGAGTTTGGA 59.227 43.478 0.00 0.00 0.00 3.53
765 766 3.871594 GTGGTTATCGATCTGGAGTTTGG 59.128 47.826 0.00 0.00 0.00 3.28
766 767 3.871594 GGTGGTTATCGATCTGGAGTTTG 59.128 47.826 0.00 0.00 0.00 2.93
767 768 3.775316 AGGTGGTTATCGATCTGGAGTTT 59.225 43.478 0.00 0.00 0.00 2.66
768 769 3.133003 CAGGTGGTTATCGATCTGGAGTT 59.867 47.826 0.00 0.00 28.93 3.01
769 770 2.695666 CAGGTGGTTATCGATCTGGAGT 59.304 50.000 0.00 0.00 28.93 3.85
770 771 2.695666 ACAGGTGGTTATCGATCTGGAG 59.304 50.000 0.00 0.00 35.34 3.86
771 772 2.747177 ACAGGTGGTTATCGATCTGGA 58.253 47.619 0.00 0.00 35.34 3.86
772 773 4.322049 GGATACAGGTGGTTATCGATCTGG 60.322 50.000 0.00 0.00 35.34 3.86
773 774 4.616143 CGGATACAGGTGGTTATCGATCTG 60.616 50.000 0.00 4.47 36.74 2.90
774 775 3.506455 CGGATACAGGTGGTTATCGATCT 59.494 47.826 0.00 0.00 0.00 2.75
775 776 3.255149 ACGGATACAGGTGGTTATCGATC 59.745 47.826 0.00 0.00 0.00 3.69
776 777 3.228453 ACGGATACAGGTGGTTATCGAT 58.772 45.455 2.16 2.16 0.00 3.59
777 778 2.620115 GACGGATACAGGTGGTTATCGA 59.380 50.000 0.00 0.00 0.00 3.59
778 779 2.621998 AGACGGATACAGGTGGTTATCG 59.378 50.000 0.00 0.00 0.00 2.92
779 780 3.635373 TGAGACGGATACAGGTGGTTATC 59.365 47.826 0.00 0.00 0.00 1.75
780 781 3.638860 TGAGACGGATACAGGTGGTTAT 58.361 45.455 0.00 0.00 0.00 1.89
781 782 3.090210 TGAGACGGATACAGGTGGTTA 57.910 47.619 0.00 0.00 0.00 2.85
782 783 1.933021 TGAGACGGATACAGGTGGTT 58.067 50.000 0.00 0.00 0.00 3.67
783 784 1.933021 TTGAGACGGATACAGGTGGT 58.067 50.000 0.00 0.00 0.00 4.16
784 785 3.328382 TTTTGAGACGGATACAGGTGG 57.672 47.619 0.00 0.00 0.00 4.61
832 833 2.810032 CGGGCAATGCACCTGACATATA 60.810 50.000 7.79 0.00 35.38 0.86
839 840 2.114670 CCTACGGGCAATGCACCTG 61.115 63.158 7.79 0.00 39.65 4.00
841 842 1.248101 AAACCTACGGGCAATGCACC 61.248 55.000 7.79 5.07 35.63 5.01
852 853 4.891992 ATATGGATCCCTGAAACCTACG 57.108 45.455 9.90 0.00 0.00 3.51
863 864 2.028112 TCGTGCTGCTTATATGGATCCC 60.028 50.000 9.90 0.00 0.00 3.85
865 866 3.677121 CAGTCGTGCTGCTTATATGGATC 59.323 47.826 0.00 0.00 38.52 3.36
935 942 2.644078 CAAGAAGTGCTTGCGAGAAAC 58.356 47.619 4.70 1.92 46.67 2.78
999 1006 2.629051 GAGGAACGAGGGTTTACCATG 58.371 52.381 0.69 0.00 43.89 3.66
1021 1028 0.179054 GGGGAGCTTCGTTATGGTCC 60.179 60.000 0.00 0.00 46.62 4.46
1036 1050 2.431419 TCAATGTTTATCTACGCGGGGA 59.569 45.455 12.47 8.56 0.00 4.81
1054 1068 3.122323 GCGGCGGAAATCGGTCAA 61.122 61.111 9.78 0.00 39.69 3.18
1147 1161 4.559704 CGTACCTTCTTCTTCTGCTTCTGT 60.560 45.833 0.00 0.00 0.00 3.41
1151 2272 4.523558 ACTACGTACCTTCTTCTTCTGCTT 59.476 41.667 0.00 0.00 0.00 3.91
1174 2295 4.459685 GGAGATCGCTTGGACTAGCTTATA 59.540 45.833 0.00 0.00 39.03 0.98
1175 2296 3.257127 GGAGATCGCTTGGACTAGCTTAT 59.743 47.826 0.00 0.00 39.03 1.73
1201 2330 5.872070 CCAGAGGTGAGAGAAGTAAATTCAC 59.128 44.000 0.00 0.00 40.67 3.18
1213 2343 1.755959 CCTGTGATCCAGAGGTGAGAG 59.244 57.143 11.48 0.00 44.49 3.20
1347 2499 0.537188 AGCATCTTGTCGTAGGTGGG 59.463 55.000 0.00 0.00 0.00 4.61
1412 4285 1.439353 TACGTACCCTAAGGCGCTCG 61.439 60.000 7.64 1.56 36.11 5.03
1437 4310 5.299531 AGAAGAGAACCGTATGATCGATCAA 59.700 40.000 30.41 17.19 40.69 2.57
1438 4311 4.822350 AGAAGAGAACCGTATGATCGATCA 59.178 41.667 29.09 29.09 41.70 2.92
1500 4373 4.887748 TCAAGGTGAGATCTTCAGACAAC 58.112 43.478 0.00 0.00 36.21 3.32
1520 4393 4.102054 TGATCTGCAGGAAGATAATGCTCA 59.898 41.667 15.13 0.00 40.62 4.26
1521 4394 4.639334 TGATCTGCAGGAAGATAATGCTC 58.361 43.478 15.13 0.00 40.62 4.26
1576 4467 2.360191 GAGCCCCCTTGCCATCAA 59.640 61.111 0.00 0.00 0.00 2.57
1601 4492 0.801251 GCTGGCATGAAGTGACACTC 59.199 55.000 8.93 3.49 42.26 3.51
1602 4493 0.607489 GGCTGGCATGAAGTGACACT 60.607 55.000 1.07 1.07 42.26 3.55
1608 4499 1.677966 CTGCTGGCTGGCATGAAGT 60.678 57.895 3.74 0.00 41.63 3.01
1665 4556 5.043189 AGAAAAACGCCACTAGCAAATAC 57.957 39.130 0.00 0.00 44.04 1.89
1688 4585 7.295340 TCATCTAATTAGCCTAGTACTGGACA 58.705 38.462 7.98 0.00 0.00 4.02
1812 4748 5.556915 TCTACAATCCCACGAACAAAGATT 58.443 37.500 0.00 0.00 0.00 2.40
1927 4889 6.369059 CAACAGAAGTCAATTCTCTTGTGT 57.631 37.500 12.84 12.84 45.50 3.72
1952 5136 7.775397 CATTGTTATTTCCCAATGGACAATC 57.225 36.000 10.60 0.00 42.58 2.67
2009 5193 2.624838 CCCATTACAATTGCTGGGCTAG 59.375 50.000 21.74 0.00 41.80 3.42
2015 5199 4.756135 ACTTTTTGCCCATTACAATTGCTG 59.244 37.500 5.05 0.82 0.00 4.41
2071 5258 2.286772 GGAGTTATAATTGCCAACGCGG 60.287 50.000 12.47 0.00 38.08 6.46
2111 5301 0.976641 ACTGATCTGGTCCTTTCGCA 59.023 50.000 4.49 0.00 0.00 5.10
2112 5302 2.100605 AACTGATCTGGTCCTTTCGC 57.899 50.000 4.49 0.00 0.00 4.70
2113 5303 7.843490 TTTTATAACTGATCTGGTCCTTTCG 57.157 36.000 4.49 0.00 0.00 3.46
2138 5328 5.245531 AGATGCTTTGTACTTCCGATGAAA 58.754 37.500 0.00 0.00 0.00 2.69
2178 5368 1.131126 GTTCGGTGGAATCTCGACGTA 59.869 52.381 0.00 0.00 34.05 3.57
2179 5369 0.109412 GTTCGGTGGAATCTCGACGT 60.109 55.000 0.00 0.00 34.05 4.34
2180 5370 0.109458 TGTTCGGTGGAATCTCGACG 60.109 55.000 0.00 0.00 34.05 5.12
2181 5371 1.725164 GTTGTTCGGTGGAATCTCGAC 59.275 52.381 0.00 0.00 34.05 4.20
2182 5372 1.337447 GGTTGTTCGGTGGAATCTCGA 60.337 52.381 0.00 0.00 34.05 4.04
2183 5373 1.076332 GGTTGTTCGGTGGAATCTCG 58.924 55.000 0.00 0.00 34.05 4.04
2184 5374 1.804748 GTGGTTGTTCGGTGGAATCTC 59.195 52.381 0.00 0.00 34.05 2.75
2199 5403 1.538047 TTCTCGCGGTAGTAGTGGTT 58.462 50.000 6.13 0.00 0.00 3.67
2214 5418 1.134530 CGTGTCGACGGCTCATTCTC 61.135 60.000 11.62 0.00 42.18 2.87
2236 5440 0.249911 GATAGGGAAGCGGCGACAAT 60.250 55.000 12.98 0.00 0.00 2.71
2264 5468 1.806542 CAAGGGTTCGACATGGTCAAG 59.193 52.381 0.00 0.00 32.09 3.02
2307 5511 4.133820 TCTCGTCATGTGGTGAAATTTGT 58.866 39.130 0.00 0.00 38.90 2.83
2320 5524 2.670414 GAGGTTTCAGCTTCTCGTCATG 59.330 50.000 0.00 0.00 0.00 3.07
2325 5529 2.003196 GAGGAGGTTTCAGCTTCTCG 57.997 55.000 0.00 0.00 38.44 4.04
2331 5535 2.035442 GTGGCGAGGAGGTTTCAGC 61.035 63.158 0.00 0.00 0.00 4.26
2334 5538 0.955919 CCTTGTGGCGAGGAGGTTTC 60.956 60.000 0.00 0.00 37.20 2.78
2348 5552 4.142359 CGTAGATTGCTACTGTCTCCTTGT 60.142 45.833 0.00 0.00 43.87 3.16
2352 5556 2.544069 GGCGTAGATTGCTACTGTCTCC 60.544 54.545 0.00 0.00 43.87 3.71
2357 5561 0.384309 TCCGGCGTAGATTGCTACTG 59.616 55.000 6.01 0.00 43.87 2.74
2358 5562 0.669077 CTCCGGCGTAGATTGCTACT 59.331 55.000 6.01 0.00 43.87 2.57
2387 5591 3.251004 GGCTCAAGTACAACCAAACTGAG 59.749 47.826 0.00 0.00 0.00 3.35
2389 5593 3.214328 AGGCTCAAGTACAACCAAACTG 58.786 45.455 0.00 0.00 0.00 3.16
2398 5602 1.203994 GTTAGGCGAGGCTCAAGTACA 59.796 52.381 15.95 0.00 0.00 2.90
2400 5604 1.848652 AGTTAGGCGAGGCTCAAGTA 58.151 50.000 15.95 0.00 0.00 2.24
2412 5616 9.623281 AAACTAGACCCGAAAACCTAGTTAGGC 62.623 44.444 12.28 0.00 46.00 3.93
2413 5617 5.186603 AACTAGACCCGAAAACCTAGTTAGG 59.813 44.000 10.75 3.63 45.33 2.69
2420 5624 3.393609 AGGAAAACTAGACCCGAAAACCT 59.606 43.478 0.00 0.00 0.00 3.50
2421 5625 3.748083 AGGAAAACTAGACCCGAAAACC 58.252 45.455 0.00 0.00 0.00 3.27
2422 5626 8.552083 TTATAAGGAAAACTAGACCCGAAAAC 57.448 34.615 0.00 0.00 0.00 2.43
2423 5627 9.002600 GTTTATAAGGAAAACTAGACCCGAAAA 57.997 33.333 0.00 0.00 34.66 2.29
2424 5628 8.377799 AGTTTATAAGGAAAACTAGACCCGAAA 58.622 33.333 0.00 0.00 43.54 3.46
2425 5629 7.820872 CAGTTTATAAGGAAAACTAGACCCGAA 59.179 37.037 0.00 0.00 43.52 4.30
2426 5630 7.325694 CAGTTTATAAGGAAAACTAGACCCGA 58.674 38.462 0.00 0.00 43.52 5.14
2427 5631 6.537660 CCAGTTTATAAGGAAAACTAGACCCG 59.462 42.308 0.00 0.00 43.52 5.28
2428 5632 7.551974 GTCCAGTTTATAAGGAAAACTAGACCC 59.448 40.741 13.01 0.00 43.61 4.46
2429 5633 8.489990 GTCCAGTTTATAAGGAAAACTAGACC 57.510 38.462 13.01 0.00 43.61 3.85
2430 5634 8.098912 TGGTCCAGTTTATAAGGAAAACTAGAC 58.901 37.037 14.70 14.70 46.13 2.59
2431 5635 8.209802 TGGTCCAGTTTATAAGGAAAACTAGA 57.790 34.615 0.00 0.00 43.52 2.43
2432 5636 8.857694 TTGGTCCAGTTTATAAGGAAAACTAG 57.142 34.615 1.24 0.00 43.52 2.57
2433 5637 9.070179 GTTTGGTCCAGTTTATAAGGAAAACTA 57.930 33.333 9.90 0.00 43.52 2.24
2434 5638 7.783119 AGTTTGGTCCAGTTTATAAGGAAAACT 59.217 33.333 12.20 12.20 45.64 2.66
2435 5639 7.948357 AGTTTGGTCCAGTTTATAAGGAAAAC 58.052 34.615 9.48 9.48 34.59 2.43
2436 5640 8.002459 AGAGTTTGGTCCAGTTTATAAGGAAAA 58.998 33.333 0.00 0.00 32.30 2.29
2437 5641 7.523415 AGAGTTTGGTCCAGTTTATAAGGAAA 58.477 34.615 0.00 0.00 32.30 3.13
2438 5642 7.017254 AGAGAGTTTGGTCCAGTTTATAAGGAA 59.983 37.037 0.00 0.00 32.30 3.36
2439 5643 6.500751 AGAGAGTTTGGTCCAGTTTATAAGGA 59.499 38.462 0.00 0.00 0.00 3.36
2440 5644 6.712276 AGAGAGTTTGGTCCAGTTTATAAGG 58.288 40.000 0.00 0.00 0.00 2.69
2441 5645 9.892130 ATAAGAGAGTTTGGTCCAGTTTATAAG 57.108 33.333 0.00 0.00 0.00 1.73
2443 5647 9.886132 GAATAAGAGAGTTTGGTCCAGTTTATA 57.114 33.333 0.00 0.00 0.00 0.98
2444 5648 8.606830 AGAATAAGAGAGTTTGGTCCAGTTTAT 58.393 33.333 0.00 0.00 0.00 1.40
2445 5649 7.974504 AGAATAAGAGAGTTTGGTCCAGTTTA 58.025 34.615 0.00 0.00 0.00 2.01
2446 5650 6.842676 AGAATAAGAGAGTTTGGTCCAGTTT 58.157 36.000 0.00 0.00 0.00 2.66
2447 5651 6.441088 AGAATAAGAGAGTTTGGTCCAGTT 57.559 37.500 0.00 0.00 0.00 3.16
2448 5652 6.441088 AAGAATAAGAGAGTTTGGTCCAGT 57.559 37.500 0.00 0.00 0.00 4.00
2449 5653 9.103861 GATTAAGAATAAGAGAGTTTGGTCCAG 57.896 37.037 0.00 0.00 0.00 3.86
2450 5654 8.602424 TGATTAAGAATAAGAGAGTTTGGTCCA 58.398 33.333 0.00 0.00 0.00 4.02
2451 5655 9.449719 TTGATTAAGAATAAGAGAGTTTGGTCC 57.550 33.333 0.00 0.00 0.00 4.46
2458 5662 9.118300 CCTGCATTTGATTAAGAATAAGAGAGT 57.882 33.333 0.00 0.00 0.00 3.24
2459 5663 9.334947 TCCTGCATTTGATTAAGAATAAGAGAG 57.665 33.333 0.00 0.00 0.00 3.20
2460 5664 9.685276 TTCCTGCATTTGATTAAGAATAAGAGA 57.315 29.630 0.00 0.00 0.00 3.10
2461 5665 9.727627 GTTCCTGCATTTGATTAAGAATAAGAG 57.272 33.333 0.00 0.00 0.00 2.85
2462 5666 8.686334 GGTTCCTGCATTTGATTAAGAATAAGA 58.314 33.333 0.00 0.00 0.00 2.10
2463 5667 7.922811 GGGTTCCTGCATTTGATTAAGAATAAG 59.077 37.037 0.00 0.00 0.00 1.73
2464 5668 7.147742 GGGGTTCCTGCATTTGATTAAGAATAA 60.148 37.037 0.00 0.00 0.00 1.40
2465 5669 6.323739 GGGGTTCCTGCATTTGATTAAGAATA 59.676 38.462 0.00 0.00 0.00 1.75
2466 5670 5.129320 GGGGTTCCTGCATTTGATTAAGAAT 59.871 40.000 0.00 0.00 0.00 2.40
2467 5671 4.466015 GGGGTTCCTGCATTTGATTAAGAA 59.534 41.667 0.00 0.00 0.00 2.52
2468 5672 4.023291 GGGGTTCCTGCATTTGATTAAGA 58.977 43.478 0.00 0.00 0.00 2.10
2469 5673 3.132824 GGGGGTTCCTGCATTTGATTAAG 59.867 47.826 0.00 0.00 0.00 1.85
2470 5674 3.103742 GGGGGTTCCTGCATTTGATTAA 58.896 45.455 0.00 0.00 0.00 1.40
2471 5675 2.314549 AGGGGGTTCCTGCATTTGATTA 59.685 45.455 0.00 0.00 46.07 1.75
2472 5676 1.079323 AGGGGGTTCCTGCATTTGATT 59.921 47.619 0.00 0.00 46.07 2.57
2473 5677 0.712380 AGGGGGTTCCTGCATTTGAT 59.288 50.000 0.00 0.00 46.07 2.57
2474 5678 2.172900 AGGGGGTTCCTGCATTTGA 58.827 52.632 0.00 0.00 46.07 2.69
2475 5679 4.872293 AGGGGGTTCCTGCATTTG 57.128 55.556 0.00 0.00 46.07 2.32
2483 5687 2.235761 TGTTAGGGCAGGGGGTTCC 61.236 63.158 0.00 0.00 0.00 3.62
2484 5688 1.001269 GTGTTAGGGCAGGGGGTTC 60.001 63.158 0.00 0.00 0.00 3.62
2485 5689 2.902457 CGTGTTAGGGCAGGGGGTT 61.902 63.158 0.00 0.00 0.00 4.11
2486 5690 3.327404 CGTGTTAGGGCAGGGGGT 61.327 66.667 0.00 0.00 0.00 4.95
2487 5691 3.006728 TCGTGTTAGGGCAGGGGG 61.007 66.667 0.00 0.00 0.00 5.40
2488 5692 2.584608 CTCGTGTTAGGGCAGGGG 59.415 66.667 0.00 0.00 0.00 4.79
2489 5693 1.838073 AACCTCGTGTTAGGGCAGGG 61.838 60.000 0.00 0.00 41.32 4.45
2490 5694 0.036306 AAACCTCGTGTTAGGGCAGG 59.964 55.000 0.00 0.00 41.32 4.85
2491 5695 2.754946 TAAACCTCGTGTTAGGGCAG 57.245 50.000 0.00 0.00 41.32 4.85
2492 5696 2.568062 TGATAAACCTCGTGTTAGGGCA 59.432 45.455 0.00 0.00 41.32 5.36
2493 5697 2.934553 GTGATAAACCTCGTGTTAGGGC 59.065 50.000 0.00 0.00 41.32 5.19
2494 5698 4.196626 TGTGATAAACCTCGTGTTAGGG 57.803 45.455 0.00 0.00 41.32 3.53
2495 5699 6.548441 TTTTGTGATAAACCTCGTGTTAGG 57.452 37.500 0.00 0.00 42.82 2.69
2519 5723 2.934553 GCTCCGGCGTAGATTACTTTTT 59.065 45.455 2.79 0.00 0.00 1.94
2520 5724 2.167900 AGCTCCGGCGTAGATTACTTTT 59.832 45.455 2.79 0.00 44.37 2.27
2521 5725 1.755380 AGCTCCGGCGTAGATTACTTT 59.245 47.619 2.79 0.00 44.37 2.66
2522 5726 1.337387 GAGCTCCGGCGTAGATTACTT 59.663 52.381 2.79 0.00 44.37 2.24
2523 5727 0.953003 GAGCTCCGGCGTAGATTACT 59.047 55.000 2.79 0.00 44.37 2.24
2524 5728 0.039346 GGAGCTCCGGCGTAGATTAC 60.039 60.000 19.06 0.00 44.37 1.89
2525 5729 2.338381 GGAGCTCCGGCGTAGATTA 58.662 57.895 19.06 0.00 44.37 1.75
2526 5730 3.130227 GGAGCTCCGGCGTAGATT 58.870 61.111 19.06 0.00 44.37 2.40
2549 5753 5.817988 TCGAGTTCATCTATTTGGACGTAG 58.182 41.667 0.00 0.00 29.89 3.51
2550 5754 5.220989 CCTCGAGTTCATCTATTTGGACGTA 60.221 44.000 12.31 0.00 29.89 3.57
2551 5755 4.440250 CCTCGAGTTCATCTATTTGGACGT 60.440 45.833 12.31 0.00 29.89 4.34
2552 5756 4.045104 CCTCGAGTTCATCTATTTGGACG 58.955 47.826 12.31 0.00 29.89 4.79
2553 5757 5.263968 TCCTCGAGTTCATCTATTTGGAC 57.736 43.478 12.31 0.00 0.00 4.02
2554 5758 4.342378 CCTCCTCGAGTTCATCTATTTGGA 59.658 45.833 12.31 0.00 0.00 3.53
2555 5759 4.342378 TCCTCCTCGAGTTCATCTATTTGG 59.658 45.833 12.31 0.00 0.00 3.28
2556 5760 5.521906 TCCTCCTCGAGTTCATCTATTTG 57.478 43.478 12.31 0.00 0.00 2.32
2557 5761 5.048364 CGATCCTCCTCGAGTTCATCTATTT 60.048 44.000 12.31 0.00 41.12 1.40
2558 5762 4.457603 CGATCCTCCTCGAGTTCATCTATT 59.542 45.833 12.31 0.00 41.12 1.73
2559 5763 4.006989 CGATCCTCCTCGAGTTCATCTAT 58.993 47.826 12.31 0.00 41.12 1.98
2560 5764 3.071167 TCGATCCTCCTCGAGTTCATCTA 59.929 47.826 12.31 0.00 42.38 1.98
2561 5765 2.158740 TCGATCCTCCTCGAGTTCATCT 60.159 50.000 12.31 0.00 42.38 2.90
2562 5766 2.222886 TCGATCCTCCTCGAGTTCATC 58.777 52.381 12.31 6.29 42.38 2.92
2563 5767 2.350057 TCGATCCTCCTCGAGTTCAT 57.650 50.000 12.31 0.00 42.38 2.57
2564 5768 3.875865 TCGATCCTCCTCGAGTTCA 57.124 52.632 12.31 0.00 42.38 3.18
2569 5773 1.669604 CAGACTTCGATCCTCCTCGA 58.330 55.000 0.00 0.00 45.32 4.04
2570 5774 0.665835 CCAGACTTCGATCCTCCTCG 59.334 60.000 0.00 0.00 39.99 4.63
2571 5775 2.060050 TCCAGACTTCGATCCTCCTC 57.940 55.000 0.00 0.00 0.00 3.71
2572 5776 2.024846 TCTTCCAGACTTCGATCCTCCT 60.025 50.000 0.00 0.00 0.00 3.69
2573 5777 2.100087 GTCTTCCAGACTTCGATCCTCC 59.900 54.545 0.00 0.00 41.88 4.30
2574 5778 2.755655 TGTCTTCCAGACTTCGATCCTC 59.244 50.000 5.53 0.00 45.27 3.71
2575 5779 2.808919 TGTCTTCCAGACTTCGATCCT 58.191 47.619 5.53 0.00 45.27 3.24
2576 5780 3.594603 TTGTCTTCCAGACTTCGATCC 57.405 47.619 5.53 0.00 45.27 3.36
2577 5781 5.004922 AGATTGTCTTCCAGACTTCGATC 57.995 43.478 5.53 4.50 45.27 3.69
2578 5782 5.413309 AAGATTGTCTTCCAGACTTCGAT 57.587 39.130 5.53 0.00 45.27 3.59
2579 5783 4.873746 AAGATTGTCTTCCAGACTTCGA 57.126 40.909 5.53 0.00 45.27 3.71
2580 5784 6.868864 TCTTTAAGATTGTCTTCCAGACTTCG 59.131 38.462 5.53 0.00 45.27 3.79
2581 5785 8.608844 TTCTTTAAGATTGTCTTCCAGACTTC 57.391 34.615 5.53 3.19 45.27 3.01
2582 5786 8.432805 TCTTCTTTAAGATTGTCTTCCAGACTT 58.567 33.333 5.53 0.00 40.06 3.01
2583 5787 7.967908 TCTTCTTTAAGATTGTCTTCCAGACT 58.032 34.615 5.53 0.00 40.06 3.24
2584 5788 8.608844 TTCTTCTTTAAGATTGTCTTCCAGAC 57.391 34.615 0.00 0.00 42.08 3.51
2585 5789 9.057089 GTTTCTTCTTTAAGATTGTCTTCCAGA 57.943 33.333 0.00 0.00 41.36 3.86
2586 5790 8.840321 TGTTTCTTCTTTAAGATTGTCTTCCAG 58.160 33.333 0.00 0.00 41.36 3.86
2587 5791 8.621286 GTGTTTCTTCTTTAAGATTGTCTTCCA 58.379 33.333 0.00 0.00 41.36 3.53
2588 5792 8.076781 GGTGTTTCTTCTTTAAGATTGTCTTCC 58.923 37.037 0.00 0.00 41.36 3.46
2589 5793 8.076781 GGGTGTTTCTTCTTTAAGATTGTCTTC 58.923 37.037 0.00 0.00 41.36 2.87
2590 5794 7.559897 TGGGTGTTTCTTCTTTAAGATTGTCTT 59.440 33.333 0.00 0.00 41.36 3.01
2591 5795 7.013369 GTGGGTGTTTCTTCTTTAAGATTGTCT 59.987 37.037 0.00 0.00 41.36 3.41
2592 5796 7.013369 AGTGGGTGTTTCTTCTTTAAGATTGTC 59.987 37.037 0.00 0.00 41.36 3.18
2593 5797 6.833933 AGTGGGTGTTTCTTCTTTAAGATTGT 59.166 34.615 0.00 0.00 41.36 2.71
2594 5798 7.277174 AGTGGGTGTTTCTTCTTTAAGATTG 57.723 36.000 0.00 0.00 41.36 2.67
2595 5799 8.218488 ACTAGTGGGTGTTTCTTCTTTAAGATT 58.782 33.333 0.00 0.00 41.36 2.40
2596 5800 7.661847 CACTAGTGGGTGTTTCTTCTTTAAGAT 59.338 37.037 15.49 0.00 35.87 2.40
2597 5801 6.990349 CACTAGTGGGTGTTTCTTCTTTAAGA 59.010 38.462 15.49 0.00 35.04 2.10
2598 5802 6.293462 GCACTAGTGGGTGTTTCTTCTTTAAG 60.293 42.308 23.95 0.00 39.21 1.85
2599 5803 5.529800 GCACTAGTGGGTGTTTCTTCTTTAA 59.470 40.000 23.95 0.00 39.21 1.52
2600 5804 5.061179 GCACTAGTGGGTGTTTCTTCTTTA 58.939 41.667 23.95 0.00 39.21 1.85
2601 5805 3.883489 GCACTAGTGGGTGTTTCTTCTTT 59.117 43.478 23.95 0.00 39.21 2.52
2602 5806 3.118038 TGCACTAGTGGGTGTTTCTTCTT 60.118 43.478 23.95 0.00 39.21 2.52
2603 5807 2.438021 TGCACTAGTGGGTGTTTCTTCT 59.562 45.455 23.95 0.00 39.21 2.85
2604 5808 2.808543 CTGCACTAGTGGGTGTTTCTTC 59.191 50.000 23.95 4.12 39.21 2.87
2605 5809 2.438021 TCTGCACTAGTGGGTGTTTCTT 59.562 45.455 23.95 0.00 39.21 2.52
2606 5810 2.047061 TCTGCACTAGTGGGTGTTTCT 58.953 47.619 23.95 0.00 39.21 2.52
2607 5811 2.543777 TCTGCACTAGTGGGTGTTTC 57.456 50.000 23.95 6.25 39.21 2.78
2608 5812 2.572290 GTTCTGCACTAGTGGGTGTTT 58.428 47.619 23.95 0.00 39.21 2.83
2609 5813 1.202770 GGTTCTGCACTAGTGGGTGTT 60.203 52.381 23.95 0.00 39.21 3.32
2610 5814 0.396811 GGTTCTGCACTAGTGGGTGT 59.603 55.000 23.95 0.00 39.21 4.16
2611 5815 0.670546 CGGTTCTGCACTAGTGGGTG 60.671 60.000 23.95 0.00 39.91 4.61
2612 5816 1.671742 CGGTTCTGCACTAGTGGGT 59.328 57.895 23.95 0.00 0.00 4.51
2613 5817 1.079127 CCGGTTCTGCACTAGTGGG 60.079 63.158 23.95 10.94 0.00 4.61
2614 5818 1.741770 GCCGGTTCTGCACTAGTGG 60.742 63.158 23.95 8.81 0.00 4.00
2615 5819 1.741770 GGCCGGTTCTGCACTAGTG 60.742 63.158 18.93 18.93 0.00 2.74
2616 5820 1.481056 AAGGCCGGTTCTGCACTAGT 61.481 55.000 1.90 0.00 0.00 2.57
2617 5821 0.321653 AAAGGCCGGTTCTGCACTAG 60.322 55.000 1.90 0.00 0.00 2.57
2618 5822 0.978151 TAAAGGCCGGTTCTGCACTA 59.022 50.000 1.90 0.00 0.00 2.74
2619 5823 0.321653 CTAAAGGCCGGTTCTGCACT 60.322 55.000 1.90 0.00 0.00 4.40
2620 5824 0.605589 ACTAAAGGCCGGTTCTGCAC 60.606 55.000 1.90 0.00 0.00 4.57
2621 5825 0.605319 CACTAAAGGCCGGTTCTGCA 60.605 55.000 1.90 0.00 0.00 4.41
2622 5826 1.923227 GCACTAAAGGCCGGTTCTGC 61.923 60.000 1.90 0.00 0.00 4.26
2623 5827 1.305930 GGCACTAAAGGCCGGTTCTG 61.306 60.000 1.90 0.00 42.39 3.02
2624 5828 1.002502 GGCACTAAAGGCCGGTTCT 60.003 57.895 1.90 0.00 42.39 3.01
2625 5829 3.587095 GGCACTAAAGGCCGGTTC 58.413 61.111 1.90 0.00 42.39 3.62
2631 5835 0.390209 TACGAACCGGCACTAAAGGC 60.390 55.000 0.00 0.00 0.00 4.35
2632 5836 1.728425 GTTACGAACCGGCACTAAAGG 59.272 52.381 0.00 0.00 0.00 3.11
2633 5837 1.387756 CGTTACGAACCGGCACTAAAG 59.612 52.381 0.00 0.00 0.00 1.85
2634 5838 1.417372 CGTTACGAACCGGCACTAAA 58.583 50.000 0.00 0.00 0.00 1.85
2635 5839 0.388391 CCGTTACGAACCGGCACTAA 60.388 55.000 6.24 0.00 37.43 2.24
2636 5840 1.212490 CCGTTACGAACCGGCACTA 59.788 57.895 6.24 0.00 37.43 2.74
2637 5841 2.048877 CCGTTACGAACCGGCACT 60.049 61.111 6.24 0.00 37.43 4.40
2641 5845 0.389687 TAAAGGCCGTTACGAACCGG 60.390 55.000 6.24 0.00 46.90 5.28
2642 5846 0.994263 CTAAAGGCCGTTACGAACCG 59.006 55.000 6.24 0.00 0.00 4.44
2643 5847 2.084610 ACTAAAGGCCGTTACGAACC 57.915 50.000 6.24 7.54 0.00 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.