Multiple sequence alignment - TraesCS2B01G427800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G427800 chr2B 100.000 3311 0 0 1 3311 615255180 615258490 0.000000e+00 6115.0
1 TraesCS2B01G427800 chr2B 95.253 632 24 3 2682 3311 742089445 742090072 0.000000e+00 996.0
2 TraesCS2B01G427800 chr2B 82.530 166 23 5 579 739 767913367 767913203 1.240000e-29 141.0
3 TraesCS2B01G427800 chr2D 92.491 1758 82 26 948 2682 522136008 522137738 0.000000e+00 2470.0
4 TraesCS2B01G427800 chr2D 86.283 452 50 3 1879 2319 605349164 605348714 6.430000e-132 481.0
5 TraesCS2B01G427800 chr2A 92.519 1751 84 24 948 2682 666834718 666836437 0.000000e+00 2464.0
6 TraesCS2B01G427800 chr2A 81.212 165 27 3 579 739 95948784 95948948 2.680000e-26 130.0
7 TraesCS2B01G427800 chr3D 93.027 631 40 2 2685 3311 540258371 540257741 0.000000e+00 918.0
8 TraesCS2B01G427800 chr3D 84.177 158 19 3 587 739 338447094 338446938 7.400000e-32 148.0
9 TraesCS2B01G427800 chr3D 86.885 61 8 0 614 674 48965568 48965628 5.930000e-08 69.4
10 TraesCS2B01G427800 chrUn 92.598 635 43 2 2681 3311 126671300 126671934 0.000000e+00 909.0
11 TraesCS2B01G427800 chrUn 92.429 634 44 2 2682 3311 295608305 295608938 0.000000e+00 902.0
12 TraesCS2B01G427800 chr3B 92.429 634 44 2 2682 3311 5743441 5744074 0.000000e+00 902.0
13 TraesCS2B01G427800 chr3B 83.077 455 63 3 1876 2316 481046834 481047288 5.150000e-108 401.0
14 TraesCS2B01G427800 chr3B 83.133 166 22 5 579 739 810548318 810548154 2.660000e-31 147.0
15 TraesCS2B01G427800 chr5B 92.417 633 43 3 2683 3311 711260810 711260179 0.000000e+00 898.0
16 TraesCS2B01G427800 chr5B 92.114 634 46 2 2682 3311 482321523 482320890 0.000000e+00 891.0
17 TraesCS2B01G427800 chr5B 84.527 349 45 2 1983 2323 47158930 47158583 1.470000e-88 337.0
18 TraesCS2B01G427800 chr7B 92.114 634 45 3 2682 3311 6398345 6398977 0.000000e+00 889.0
19 TraesCS2B01G427800 chr4A 91.956 634 47 2 2682 3311 709885809 709885176 0.000000e+00 885.0
20 TraesCS2B01G427800 chr6D 85.100 349 43 2 1983 2323 252018407 252018754 6.800000e-92 348.0
21 TraesCS2B01G427800 chr1B 84.419 353 40 5 1982 2323 643066324 643065976 1.900000e-87 333.0
22 TraesCS2B01G427800 chr1B 83.117 154 20 5 579 727 8769894 8769742 5.760000e-28 135.0
23 TraesCS2B01G427800 chr7A 82.134 403 56 12 360 751 22922288 22922685 6.850000e-87 331.0
24 TraesCS2B01G427800 chr6B 83.636 165 22 3 579 739 422316234 422316397 2.060000e-32 150.0
25 TraesCS2B01G427800 chr6B 92.063 63 5 0 677 739 632307155 632307093 4.550000e-14 89.8
26 TraesCS2B01G427800 chr7D 77.576 165 29 6 579 738 79968472 79968633 3.520000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G427800 chr2B 615255180 615258490 3310 False 6115 6115 100.000 1 3311 1 chr2B.!!$F1 3310
1 TraesCS2B01G427800 chr2B 742089445 742090072 627 False 996 996 95.253 2682 3311 1 chr2B.!!$F2 629
2 TraesCS2B01G427800 chr2D 522136008 522137738 1730 False 2470 2470 92.491 948 2682 1 chr2D.!!$F1 1734
3 TraesCS2B01G427800 chr2A 666834718 666836437 1719 False 2464 2464 92.519 948 2682 1 chr2A.!!$F2 1734
4 TraesCS2B01G427800 chr3D 540257741 540258371 630 True 918 918 93.027 2685 3311 1 chr3D.!!$R2 626
5 TraesCS2B01G427800 chrUn 126671300 126671934 634 False 909 909 92.598 2681 3311 1 chrUn.!!$F1 630
6 TraesCS2B01G427800 chrUn 295608305 295608938 633 False 902 902 92.429 2682 3311 1 chrUn.!!$F2 629
7 TraesCS2B01G427800 chr3B 5743441 5744074 633 False 902 902 92.429 2682 3311 1 chr3B.!!$F1 629
8 TraesCS2B01G427800 chr5B 711260179 711260810 631 True 898 898 92.417 2683 3311 1 chr5B.!!$R3 628
9 TraesCS2B01G427800 chr5B 482320890 482321523 633 True 891 891 92.114 2682 3311 1 chr5B.!!$R2 629
10 TraesCS2B01G427800 chr7B 6398345 6398977 632 False 889 889 92.114 2682 3311 1 chr7B.!!$F1 629
11 TraesCS2B01G427800 chr4A 709885176 709885809 633 True 885 885 91.956 2682 3311 1 chr4A.!!$R1 629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
628 629 0.103755 TTTGTTTGGCAATGCGCTCA 59.896 45.0 9.73 0.0 41.91 4.26 F
852 853 0.310854 AAAAAGGCAACGCTTCGGAG 59.689 50.0 0.00 0.0 46.39 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2040 2059 0.541863 CCTTGACTATCTTGGGCGGT 59.458 55.000 0.0 0.0 0.0 5.68 R
2545 2571 1.528586 CAACAGAGAAGCAACACGGAG 59.471 52.381 0.0 0.0 0.0 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.548196 TGGATCAAAATCTTACAACCGATAC 57.452 36.000 0.00 0.00 32.12 2.24
25 26 7.106890 TGGATCAAAATCTTACAACCGATACA 58.893 34.615 0.00 0.00 32.12 2.29
26 27 7.773224 TGGATCAAAATCTTACAACCGATACAT 59.227 33.333 0.00 0.00 32.12 2.29
27 28 8.283291 GGATCAAAATCTTACAACCGATACATC 58.717 37.037 0.00 0.00 32.12 3.06
28 29 8.964476 ATCAAAATCTTACAACCGATACATCT 57.036 30.769 0.00 0.00 0.00 2.90
29 30 8.786826 TCAAAATCTTACAACCGATACATCTT 57.213 30.769 0.00 0.00 0.00 2.40
30 31 8.879759 TCAAAATCTTACAACCGATACATCTTC 58.120 33.333 0.00 0.00 0.00 2.87
31 32 8.883731 CAAAATCTTACAACCGATACATCTTCT 58.116 33.333 0.00 0.00 0.00 2.85
32 33 9.449719 AAAATCTTACAACCGATACATCTTCTT 57.550 29.630 0.00 0.00 0.00 2.52
33 34 9.449719 AAATCTTACAACCGATACATCTTCTTT 57.550 29.630 0.00 0.00 0.00 2.52
34 35 8.649973 ATCTTACAACCGATACATCTTCTTTC 57.350 34.615 0.00 0.00 0.00 2.62
35 36 7.837863 TCTTACAACCGATACATCTTCTTTCT 58.162 34.615 0.00 0.00 0.00 2.52
36 37 7.759886 TCTTACAACCGATACATCTTCTTTCTG 59.240 37.037 0.00 0.00 0.00 3.02
37 38 4.631813 ACAACCGATACATCTTCTTTCTGC 59.368 41.667 0.00 0.00 0.00 4.26
38 39 4.744795 ACCGATACATCTTCTTTCTGCT 57.255 40.909 0.00 0.00 0.00 4.24
39 40 4.688021 ACCGATACATCTTCTTTCTGCTC 58.312 43.478 0.00 0.00 0.00 4.26
40 41 4.404073 ACCGATACATCTTCTTTCTGCTCT 59.596 41.667 0.00 0.00 0.00 4.09
41 42 5.594725 ACCGATACATCTTCTTTCTGCTCTA 59.405 40.000 0.00 0.00 0.00 2.43
42 43 6.148948 CCGATACATCTTCTTTCTGCTCTAG 58.851 44.000 0.00 0.00 0.00 2.43
43 44 6.016693 CCGATACATCTTCTTTCTGCTCTAGA 60.017 42.308 0.00 0.00 0.00 2.43
44 45 6.855914 CGATACATCTTCTTTCTGCTCTAGAC 59.144 42.308 0.00 0.00 34.43 2.59
45 46 4.992688 ACATCTTCTTTCTGCTCTAGACG 58.007 43.478 0.00 0.00 34.43 4.18
46 47 3.495670 TCTTCTTTCTGCTCTAGACGC 57.504 47.619 7.10 7.10 34.43 5.19
47 48 2.820197 TCTTCTTTCTGCTCTAGACGCA 59.180 45.455 13.80 13.80 34.43 5.24
48 49 3.445450 TCTTCTTTCTGCTCTAGACGCAT 59.555 43.478 14.58 0.00 36.70 4.73
49 50 3.428746 TCTTTCTGCTCTAGACGCATC 57.571 47.619 14.58 0.00 36.70 3.91
50 51 2.099921 TCTTTCTGCTCTAGACGCATCC 59.900 50.000 14.58 0.00 36.70 3.51
51 52 1.474330 TTCTGCTCTAGACGCATCCA 58.526 50.000 14.58 3.29 36.70 3.41
52 53 0.741326 TCTGCTCTAGACGCATCCAC 59.259 55.000 14.58 0.00 36.70 4.02
53 54 0.457443 CTGCTCTAGACGCATCCACA 59.543 55.000 14.58 0.00 36.70 4.17
54 55 0.173481 TGCTCTAGACGCATCCACAC 59.827 55.000 11.38 0.00 31.40 3.82
55 56 0.528684 GCTCTAGACGCATCCACACC 60.529 60.000 8.69 0.00 0.00 4.16
56 57 1.107114 CTCTAGACGCATCCACACCT 58.893 55.000 0.00 0.00 0.00 4.00
57 58 1.478510 CTCTAGACGCATCCACACCTT 59.521 52.381 0.00 0.00 0.00 3.50
58 59 1.204704 TCTAGACGCATCCACACCTTG 59.795 52.381 0.00 0.00 0.00 3.61
59 60 1.204704 CTAGACGCATCCACACCTTGA 59.795 52.381 0.00 0.00 0.00 3.02
60 61 0.615331 AGACGCATCCACACCTTGAT 59.385 50.000 0.00 0.00 0.00 2.57
61 62 0.729116 GACGCATCCACACCTTGATG 59.271 55.000 0.00 0.00 41.02 3.07
64 65 2.496942 CATCCACACCTTGATGCCC 58.503 57.895 0.00 0.00 32.71 5.36
65 66 0.323633 CATCCACACCTTGATGCCCA 60.324 55.000 0.00 0.00 32.71 5.36
66 67 0.323725 ATCCACACCTTGATGCCCAC 60.324 55.000 0.00 0.00 0.00 4.61
67 68 1.978617 CCACACCTTGATGCCCACC 60.979 63.158 0.00 0.00 0.00 4.61
68 69 1.978617 CACACCTTGATGCCCACCC 60.979 63.158 0.00 0.00 0.00 4.61
69 70 2.362889 CACCTTGATGCCCACCCC 60.363 66.667 0.00 0.00 0.00 4.95
70 71 2.535317 ACCTTGATGCCCACCCCT 60.535 61.111 0.00 0.00 0.00 4.79
71 72 2.169810 ACCTTGATGCCCACCCCTT 61.170 57.895 0.00 0.00 0.00 3.95
72 73 1.683365 CCTTGATGCCCACCCCTTG 60.683 63.158 0.00 0.00 0.00 3.61
73 74 2.283821 TTGATGCCCACCCCTTGC 60.284 61.111 0.00 0.00 0.00 4.01
74 75 3.903281 TTGATGCCCACCCCTTGCC 62.903 63.158 0.00 0.00 0.00 4.52
75 76 4.066139 GATGCCCACCCCTTGCCT 62.066 66.667 0.00 0.00 0.00 4.75
76 77 4.066139 ATGCCCACCCCTTGCCTC 62.066 66.667 0.00 0.00 0.00 4.70
78 79 4.748144 GCCCACCCCTTGCCTCTG 62.748 72.222 0.00 0.00 0.00 3.35
79 80 4.748144 CCCACCCCTTGCCTCTGC 62.748 72.222 0.00 0.00 38.26 4.26
80 81 3.655211 CCACCCCTTGCCTCTGCT 61.655 66.667 0.00 0.00 38.71 4.24
81 82 2.437897 CACCCCTTGCCTCTGCTT 59.562 61.111 0.00 0.00 38.71 3.91
82 83 1.676967 CACCCCTTGCCTCTGCTTC 60.677 63.158 0.00 0.00 38.71 3.86
83 84 2.437359 CCCCTTGCCTCTGCTTCG 60.437 66.667 0.00 0.00 38.71 3.79
84 85 2.665000 CCCTTGCCTCTGCTTCGA 59.335 61.111 0.00 0.00 38.71 3.71
85 86 1.743252 CCCTTGCCTCTGCTTCGAC 60.743 63.158 0.00 0.00 38.71 4.20
86 87 2.097038 CCTTGCCTCTGCTTCGACG 61.097 63.158 0.00 0.00 38.71 5.12
87 88 2.048222 TTGCCTCTGCTTCGACGG 60.048 61.111 0.00 0.00 38.71 4.79
88 89 2.771763 CTTGCCTCTGCTTCGACGGT 62.772 60.000 0.00 0.00 38.71 4.83
89 90 2.811317 GCCTCTGCTTCGACGGTG 60.811 66.667 0.00 0.00 33.53 4.94
90 91 2.962569 CCTCTGCTTCGACGGTGA 59.037 61.111 0.00 0.00 0.00 4.02
91 92 1.444553 CCTCTGCTTCGACGGTGAC 60.445 63.158 0.00 0.00 0.00 3.67
103 104 4.456806 GGTGACGGCACAAAGTCT 57.543 55.556 25.47 0.00 46.96 3.24
104 105 2.235546 GGTGACGGCACAAAGTCTC 58.764 57.895 25.47 0.00 46.96 3.36
105 106 0.249911 GGTGACGGCACAAAGTCTCT 60.250 55.000 25.47 0.00 46.96 3.10
106 107 0.861837 GTGACGGCACAAAGTCTCTG 59.138 55.000 18.77 0.00 44.51 3.35
107 108 0.249868 TGACGGCACAAAGTCTCTGG 60.250 55.000 0.00 0.00 38.16 3.86
108 109 0.249911 GACGGCACAAAGTCTCTGGT 60.250 55.000 0.00 0.00 34.74 4.00
109 110 0.532862 ACGGCACAAAGTCTCTGGTG 60.533 55.000 0.00 0.00 0.00 4.17
110 111 0.249868 CGGCACAAAGTCTCTGGTGA 60.250 55.000 0.00 0.00 33.16 4.02
111 112 1.810031 CGGCACAAAGTCTCTGGTGAA 60.810 52.381 0.00 0.00 33.16 3.18
112 113 2.297701 GGCACAAAGTCTCTGGTGAAA 58.702 47.619 0.00 0.00 33.16 2.69
113 114 2.887152 GGCACAAAGTCTCTGGTGAAAT 59.113 45.455 0.00 0.00 33.16 2.17
114 115 3.057946 GGCACAAAGTCTCTGGTGAAATC 60.058 47.826 0.00 0.00 33.16 2.17
115 116 3.057946 GCACAAAGTCTCTGGTGAAATCC 60.058 47.826 0.00 0.00 33.16 3.01
116 117 4.392940 CACAAAGTCTCTGGTGAAATCCT 58.607 43.478 0.00 0.00 33.16 3.24
117 118 5.551233 CACAAAGTCTCTGGTGAAATCCTA 58.449 41.667 0.00 0.00 33.16 2.94
118 119 5.641209 CACAAAGTCTCTGGTGAAATCCTAG 59.359 44.000 0.00 0.00 33.16 3.02
119 120 4.479786 AAGTCTCTGGTGAAATCCTAGC 57.520 45.455 0.00 0.00 0.00 3.42
120 121 3.718723 AGTCTCTGGTGAAATCCTAGCT 58.281 45.455 0.00 0.00 0.00 3.32
121 122 3.704061 AGTCTCTGGTGAAATCCTAGCTC 59.296 47.826 0.00 0.00 0.00 4.09
122 123 3.704061 GTCTCTGGTGAAATCCTAGCTCT 59.296 47.826 0.00 0.00 0.00 4.09
123 124 3.703556 TCTCTGGTGAAATCCTAGCTCTG 59.296 47.826 0.00 0.00 0.00 3.35
124 125 2.169352 TCTGGTGAAATCCTAGCTCTGC 59.831 50.000 0.00 0.00 0.00 4.26
125 126 1.210478 TGGTGAAATCCTAGCTCTGCC 59.790 52.381 0.00 0.00 0.00 4.85
126 127 1.488393 GGTGAAATCCTAGCTCTGCCT 59.512 52.381 0.00 0.00 0.00 4.75
127 128 2.484594 GGTGAAATCCTAGCTCTGCCTC 60.485 54.545 0.00 0.00 0.00 4.70
128 129 2.169352 GTGAAATCCTAGCTCTGCCTCA 59.831 50.000 0.00 0.00 0.00 3.86
129 130 2.433604 TGAAATCCTAGCTCTGCCTCAG 59.566 50.000 0.00 0.00 0.00 3.35
130 131 2.468301 AATCCTAGCTCTGCCTCAGA 57.532 50.000 0.00 0.00 38.25 3.27
137 138 2.677875 TCTGCCTCAGAGCTGCGA 60.678 61.111 0.00 0.00 35.39 5.10
138 139 2.263852 CTGCCTCAGAGCTGCGAA 59.736 61.111 0.00 0.00 32.44 4.70
139 140 1.153409 CTGCCTCAGAGCTGCGAAT 60.153 57.895 0.00 0.00 32.44 3.34
140 141 1.152989 CTGCCTCAGAGCTGCGAATC 61.153 60.000 0.00 0.00 32.44 2.52
141 142 1.143620 GCCTCAGAGCTGCGAATCT 59.856 57.895 0.00 0.00 0.00 2.40
142 143 0.461693 GCCTCAGAGCTGCGAATCTT 60.462 55.000 0.00 0.00 0.00 2.40
143 144 1.569708 CCTCAGAGCTGCGAATCTTC 58.430 55.000 0.00 0.00 0.00 2.87
144 145 1.136695 CCTCAGAGCTGCGAATCTTCT 59.863 52.381 0.00 0.00 0.00 2.85
145 146 2.462889 CTCAGAGCTGCGAATCTTCTC 58.537 52.381 0.00 0.00 0.00 2.87
146 147 2.098614 TCAGAGCTGCGAATCTTCTCT 58.901 47.619 0.00 0.00 34.74 3.10
147 148 2.495270 TCAGAGCTGCGAATCTTCTCTT 59.505 45.455 0.00 0.00 32.32 2.85
148 149 2.859538 CAGAGCTGCGAATCTTCTCTTC 59.140 50.000 0.00 0.00 32.32 2.87
149 150 1.851666 GAGCTGCGAATCTTCTCTTCG 59.148 52.381 0.00 1.34 46.22 3.79
150 151 1.474478 AGCTGCGAATCTTCTCTTCGA 59.526 47.619 9.40 0.00 46.36 3.71
151 152 1.851666 GCTGCGAATCTTCTCTTCGAG 59.148 52.381 9.40 5.44 46.36 4.04
152 153 2.478709 GCTGCGAATCTTCTCTTCGAGA 60.479 50.000 9.40 0.00 46.36 4.04
153 154 3.763902 CTGCGAATCTTCTCTTCGAGAA 58.236 45.455 9.40 2.82 46.36 2.87
165 166 7.767745 TTCTCTTCGAGAAGATGAATTGATG 57.232 36.000 14.99 2.18 45.40 3.07
166 167 6.279123 TCTCTTCGAGAAGATGAATTGATGG 58.721 40.000 14.99 1.55 45.40 3.51
167 168 5.982356 TCTTCGAGAAGATGAATTGATGGT 58.018 37.500 11.14 0.00 42.06 3.55
168 169 7.068716 TCTCTTCGAGAAGATGAATTGATGGTA 59.931 37.037 14.99 0.00 45.40 3.25
169 170 6.980978 TCTTCGAGAAGATGAATTGATGGTAC 59.019 38.462 11.14 0.00 42.06 3.34
170 171 6.758416 CTTCGAGAAGATGAATTGATGGTACA 59.242 38.462 7.02 0.00 41.72 2.90
171 172 7.278646 CTTCGAGAAGATGAATTGATGGTACAA 59.721 37.037 7.02 0.00 41.07 2.41
205 206 9.806203 TTGAAAATAATAAATGCCTGATGTCAG 57.194 29.630 3.01 3.01 43.40 3.51
219 220 2.112380 TGTCAGGTACATGCACATGG 57.888 50.000 10.64 0.00 42.91 3.66
220 221 1.627834 TGTCAGGTACATGCACATGGA 59.372 47.619 10.64 3.32 42.91 3.41
221 222 2.039613 TGTCAGGTACATGCACATGGAA 59.960 45.455 10.64 0.00 42.91 3.53
222 223 3.081061 GTCAGGTACATGCACATGGAAA 58.919 45.455 10.64 0.00 42.91 3.13
223 224 3.505680 GTCAGGTACATGCACATGGAAAA 59.494 43.478 10.64 0.00 42.91 2.29
224 225 4.022416 GTCAGGTACATGCACATGGAAAAA 60.022 41.667 10.64 0.00 42.91 1.94
225 226 4.771577 TCAGGTACATGCACATGGAAAAAT 59.228 37.500 10.64 0.00 42.91 1.82
226 227 5.948758 TCAGGTACATGCACATGGAAAAATA 59.051 36.000 10.64 0.00 42.91 1.40
227 228 6.095300 TCAGGTACATGCACATGGAAAAATAG 59.905 38.462 10.64 0.00 42.91 1.73
228 229 6.095300 CAGGTACATGCACATGGAAAAATAGA 59.905 38.462 14.73 0.00 42.91 1.98
229 230 6.095440 AGGTACATGCACATGGAAAAATAGAC 59.905 38.462 14.73 0.00 42.91 2.59
230 231 5.981088 ACATGCACATGGAAAAATAGACA 57.019 34.783 14.73 0.00 42.91 3.41
231 232 6.534475 ACATGCACATGGAAAAATAGACAT 57.466 33.333 14.73 0.00 42.91 3.06
232 233 6.938507 ACATGCACATGGAAAAATAGACATT 58.061 32.000 14.73 0.00 42.91 2.71
233 234 7.388437 ACATGCACATGGAAAAATAGACATTT 58.612 30.769 14.73 0.00 42.91 2.32
234 235 7.879160 ACATGCACATGGAAAAATAGACATTTT 59.121 29.630 14.73 0.00 42.57 1.82
259 260 9.806203 TTTTTATGGCAATTCTAGTTGATGATG 57.194 29.630 0.00 0.00 0.00 3.07
260 261 8.750515 TTTATGGCAATTCTAGTTGATGATGA 57.249 30.769 0.00 0.00 0.00 2.92
261 262 8.929260 TTATGGCAATTCTAGTTGATGATGAT 57.071 30.769 0.00 0.00 0.00 2.45
263 264 8.929260 ATGGCAATTCTAGTTGATGATGATAA 57.071 30.769 0.00 0.00 0.00 1.75
264 265 8.929260 TGGCAATTCTAGTTGATGATGATAAT 57.071 30.769 0.00 0.00 0.00 1.28
265 266 9.358406 TGGCAATTCTAGTTGATGATGATAATT 57.642 29.630 0.00 0.00 0.00 1.40
290 291 8.918202 TTTTGTCTACAAGTACATCAATTCCT 57.082 30.769 0.00 0.00 37.15 3.36
291 292 8.918202 TTTGTCTACAAGTACATCAATTCCTT 57.082 30.769 0.00 0.00 37.15 3.36
293 294 9.653287 TTGTCTACAAGTACATCAATTCCTTAG 57.347 33.333 0.00 0.00 0.00 2.18
294 295 9.031537 TGTCTACAAGTACATCAATTCCTTAGA 57.968 33.333 0.00 0.00 0.00 2.10
295 296 9.871238 GTCTACAAGTACATCAATTCCTTAGAA 57.129 33.333 0.00 0.00 36.15 2.10
336 337 2.486966 GCCATGAGCGAACTTGCC 59.513 61.111 0.00 0.00 34.65 4.52
337 338 2.334946 GCCATGAGCGAACTTGCCA 61.335 57.895 0.00 0.00 34.65 4.92
338 339 1.660560 GCCATGAGCGAACTTGCCAT 61.661 55.000 0.00 0.00 34.65 4.40
339 340 0.813184 CCATGAGCGAACTTGCCATT 59.187 50.000 0.00 0.00 34.65 3.16
340 341 1.202222 CCATGAGCGAACTTGCCATTC 60.202 52.381 0.00 0.00 34.65 2.67
341 342 1.741706 CATGAGCGAACTTGCCATTCT 59.258 47.619 0.00 0.00 34.65 2.40
342 343 1.442769 TGAGCGAACTTGCCATTCTC 58.557 50.000 0.00 0.00 34.65 2.87
343 344 1.270785 TGAGCGAACTTGCCATTCTCA 60.271 47.619 0.00 0.00 34.65 3.27
344 345 1.806542 GAGCGAACTTGCCATTCTCAA 59.193 47.619 0.00 0.00 34.65 3.02
345 346 2.226437 GAGCGAACTTGCCATTCTCAAA 59.774 45.455 0.00 0.00 34.65 2.69
346 347 2.622942 AGCGAACTTGCCATTCTCAAAA 59.377 40.909 0.00 0.00 34.65 2.44
347 348 3.068024 AGCGAACTTGCCATTCTCAAAAA 59.932 39.130 0.00 0.00 34.65 1.94
348 349 3.182372 GCGAACTTGCCATTCTCAAAAAC 59.818 43.478 0.00 0.00 0.00 2.43
349 350 4.358851 CGAACTTGCCATTCTCAAAAACA 58.641 39.130 0.00 0.00 0.00 2.83
350 351 4.803088 CGAACTTGCCATTCTCAAAAACAA 59.197 37.500 0.00 0.00 0.00 2.83
351 352 5.290643 CGAACTTGCCATTCTCAAAAACAAA 59.709 36.000 0.00 0.00 0.00 2.83
352 353 6.018832 CGAACTTGCCATTCTCAAAAACAAAT 60.019 34.615 0.00 0.00 0.00 2.32
353 354 7.168972 CGAACTTGCCATTCTCAAAAACAAATA 59.831 33.333 0.00 0.00 0.00 1.40
354 355 8.907222 AACTTGCCATTCTCAAAAACAAATAT 57.093 26.923 0.00 0.00 0.00 1.28
355 356 9.995003 AACTTGCCATTCTCAAAAACAAATATA 57.005 25.926 0.00 0.00 0.00 0.86
356 357 9.995003 ACTTGCCATTCTCAAAAACAAATATAA 57.005 25.926 0.00 0.00 0.00 0.98
401 402 8.587952 AGGAAAATGTCGGTAAAATTTCAAAG 57.412 30.769 0.00 0.00 0.00 2.77
402 403 7.170828 AGGAAAATGTCGGTAAAATTTCAAAGC 59.829 33.333 0.00 0.00 0.00 3.51
403 404 7.170828 GGAAAATGTCGGTAAAATTTCAAAGCT 59.829 33.333 0.00 0.00 0.00 3.74
404 405 7.406799 AAATGTCGGTAAAATTTCAAAGCTG 57.593 32.000 0.00 0.00 0.00 4.24
405 406 4.865776 TGTCGGTAAAATTTCAAAGCTGG 58.134 39.130 0.00 0.00 0.00 4.85
406 407 4.580995 TGTCGGTAAAATTTCAAAGCTGGA 59.419 37.500 0.00 0.00 0.00 3.86
407 408 4.915667 GTCGGTAAAATTTCAAAGCTGGAC 59.084 41.667 0.00 0.00 0.00 4.02
408 409 3.911964 CGGTAAAATTTCAAAGCTGGACG 59.088 43.478 0.00 0.00 0.00 4.79
409 410 4.555906 CGGTAAAATTTCAAAGCTGGACGT 60.556 41.667 0.00 0.00 0.00 4.34
410 411 4.915667 GGTAAAATTTCAAAGCTGGACGTC 59.084 41.667 7.13 7.13 0.00 4.34
411 412 2.969443 AATTTCAAAGCTGGACGTCG 57.031 45.000 9.92 0.00 0.00 5.12
412 413 0.517316 ATTTCAAAGCTGGACGTCGC 59.483 50.000 9.92 8.46 0.00 5.19
413 414 1.827315 TTTCAAAGCTGGACGTCGCG 61.827 55.000 9.92 0.00 0.00 5.87
414 415 2.964438 TTCAAAGCTGGACGTCGCGT 62.964 55.000 9.92 3.65 45.10 6.01
415 416 2.279918 AAAGCTGGACGTCGCGTT 60.280 55.556 9.92 9.93 41.37 4.84
416 417 1.007038 AAAGCTGGACGTCGCGTTA 60.007 52.632 13.13 0.00 41.37 3.18
417 418 0.389426 AAAGCTGGACGTCGCGTTAT 60.389 50.000 13.13 0.00 41.37 1.89
418 419 1.076533 AAGCTGGACGTCGCGTTATG 61.077 55.000 9.92 0.00 41.37 1.90
419 420 1.804326 GCTGGACGTCGCGTTATGT 60.804 57.895 9.92 0.00 41.37 2.29
420 421 1.988409 CTGGACGTCGCGTTATGTG 59.012 57.895 9.92 0.00 41.37 3.21
421 422 1.410737 CTGGACGTCGCGTTATGTGG 61.411 60.000 9.92 0.00 41.37 4.17
422 423 1.444895 GGACGTCGCGTTATGTGGT 60.445 57.895 9.92 0.00 41.37 4.16
423 424 1.010419 GGACGTCGCGTTATGTGGTT 61.010 55.000 9.92 0.00 41.37 3.67
424 425 1.616620 GACGTCGCGTTATGTGGTTA 58.383 50.000 5.77 0.00 41.37 2.85
425 426 1.984990 GACGTCGCGTTATGTGGTTAA 59.015 47.619 5.77 0.00 41.37 2.01
426 427 2.402305 ACGTCGCGTTATGTGGTTAAA 58.598 42.857 5.77 0.00 36.35 1.52
427 428 2.995258 ACGTCGCGTTATGTGGTTAAAT 59.005 40.909 5.77 0.00 36.35 1.40
428 429 4.172505 ACGTCGCGTTATGTGGTTAAATA 58.827 39.130 5.77 0.00 36.35 1.40
429 430 4.031652 ACGTCGCGTTATGTGGTTAAATAC 59.968 41.667 5.77 0.00 36.35 1.89
430 431 4.031539 CGTCGCGTTATGTGGTTAAATACA 59.968 41.667 5.77 0.00 0.00 2.29
431 432 5.276489 CGTCGCGTTATGTGGTTAAATACAT 60.276 40.000 5.77 9.85 40.39 2.29
432 433 6.480285 GTCGCGTTATGTGGTTAAATACATT 58.520 36.000 5.77 0.00 38.41 2.71
433 434 6.626095 GTCGCGTTATGTGGTTAAATACATTC 59.374 38.462 5.77 5.31 38.41 2.67
434 435 6.535865 TCGCGTTATGTGGTTAAATACATTCT 59.464 34.615 5.77 0.00 38.41 2.40
435 436 6.844279 CGCGTTATGTGGTTAAATACATTCTC 59.156 38.462 10.14 3.30 38.41 2.87
436 437 6.844279 GCGTTATGTGGTTAAATACATTCTCG 59.156 38.462 10.14 12.11 38.41 4.04
437 438 6.844279 CGTTATGTGGTTAAATACATTCTCGC 59.156 38.462 10.14 0.00 38.41 5.03
438 439 7.254319 CGTTATGTGGTTAAATACATTCTCGCT 60.254 37.037 10.14 0.00 38.41 4.93
439 440 8.395633 GTTATGTGGTTAAATACATTCTCGCTT 58.604 33.333 10.14 0.00 38.41 4.68
440 441 6.811253 TGTGGTTAAATACATTCTCGCTTT 57.189 33.333 0.00 0.00 0.00 3.51
441 442 7.209471 TGTGGTTAAATACATTCTCGCTTTT 57.791 32.000 0.00 0.00 0.00 2.27
442 443 8.325421 TGTGGTTAAATACATTCTCGCTTTTA 57.675 30.769 0.00 0.00 0.00 1.52
443 444 8.784994 TGTGGTTAAATACATTCTCGCTTTTAA 58.215 29.630 0.00 0.00 0.00 1.52
444 445 9.783256 GTGGTTAAATACATTCTCGCTTTTAAT 57.217 29.630 0.00 0.00 0.00 1.40
450 451 9.906660 AAATACATTCTCGCTTTTAATTTGTCA 57.093 25.926 0.00 0.00 0.00 3.58
451 452 9.906660 AATACATTCTCGCTTTTAATTTGTCAA 57.093 25.926 0.00 0.00 0.00 3.18
452 453 7.858052 ACATTCTCGCTTTTAATTTGTCAAG 57.142 32.000 0.00 0.00 0.00 3.02
453 454 7.648142 ACATTCTCGCTTTTAATTTGTCAAGA 58.352 30.769 0.00 0.00 0.00 3.02
454 455 8.134895 ACATTCTCGCTTTTAATTTGTCAAGAA 58.865 29.630 0.00 0.00 0.00 2.52
455 456 9.132521 CATTCTCGCTTTTAATTTGTCAAGAAT 57.867 29.630 0.00 0.00 31.74 2.40
457 458 9.825972 TTCTCGCTTTTAATTTGTCAAGAATAG 57.174 29.630 0.00 0.00 0.00 1.73
458 459 7.962918 TCTCGCTTTTAATTTGTCAAGAATAGC 59.037 33.333 8.22 8.22 0.00 2.97
459 460 7.816640 TCGCTTTTAATTTGTCAAGAATAGCT 58.183 30.769 0.00 0.00 0.00 3.32
460 461 8.941977 TCGCTTTTAATTTGTCAAGAATAGCTA 58.058 29.630 0.00 0.00 0.00 3.32
461 462 9.722056 CGCTTTTAATTTGTCAAGAATAGCTAT 57.278 29.630 0.00 0.00 0.00 2.97
471 472 9.809096 TTGTCAAGAATAGCTATCTGTTTAGAG 57.191 33.333 6.72 0.00 36.14 2.43
472 473 8.972127 TGTCAAGAATAGCTATCTGTTTAGAGT 58.028 33.333 6.72 0.00 36.14 3.24
473 474 9.243637 GTCAAGAATAGCTATCTGTTTAGAGTG 57.756 37.037 6.72 0.20 36.14 3.51
474 475 7.923344 TCAAGAATAGCTATCTGTTTAGAGTGC 59.077 37.037 6.72 0.00 36.14 4.40
475 476 6.754193 AGAATAGCTATCTGTTTAGAGTGCC 58.246 40.000 6.72 0.00 36.42 5.01
476 477 6.553100 AGAATAGCTATCTGTTTAGAGTGCCT 59.447 38.462 6.72 0.00 36.42 4.75
477 478 7.726291 AGAATAGCTATCTGTTTAGAGTGCCTA 59.274 37.037 6.72 0.00 36.42 3.93
478 479 5.782893 AGCTATCTGTTTAGAGTGCCTAG 57.217 43.478 0.00 0.00 36.42 3.02
479 480 4.038642 AGCTATCTGTTTAGAGTGCCTAGC 59.961 45.833 0.00 0.00 37.04 3.42
480 481 4.202161 GCTATCTGTTTAGAGTGCCTAGCA 60.202 45.833 0.00 0.00 36.89 3.49
481 482 5.510520 GCTATCTGTTTAGAGTGCCTAGCAT 60.511 44.000 0.00 0.00 36.89 3.79
482 483 4.128925 TCTGTTTAGAGTGCCTAGCATG 57.871 45.455 0.00 0.00 41.91 4.06
483 484 3.515502 TCTGTTTAGAGTGCCTAGCATGT 59.484 43.478 0.00 0.00 41.91 3.21
484 485 3.599343 TGTTTAGAGTGCCTAGCATGTG 58.401 45.455 0.00 0.00 41.91 3.21
485 486 3.007940 TGTTTAGAGTGCCTAGCATGTGT 59.992 43.478 0.00 0.00 41.91 3.72
486 487 4.221924 TGTTTAGAGTGCCTAGCATGTGTA 59.778 41.667 0.00 0.00 41.91 2.90
487 488 4.655762 TTAGAGTGCCTAGCATGTGTAG 57.344 45.455 0.00 0.00 41.91 2.74
488 489 2.461695 AGAGTGCCTAGCATGTGTAGT 58.538 47.619 0.00 0.00 41.91 2.73
489 490 2.834549 AGAGTGCCTAGCATGTGTAGTT 59.165 45.455 0.00 0.00 41.91 2.24
490 491 3.261897 AGAGTGCCTAGCATGTGTAGTTT 59.738 43.478 0.00 0.00 41.91 2.66
491 492 4.466370 AGAGTGCCTAGCATGTGTAGTTTA 59.534 41.667 0.00 0.00 41.91 2.01
492 493 4.759782 AGTGCCTAGCATGTGTAGTTTAG 58.240 43.478 0.00 0.00 41.91 1.85
493 494 3.309954 GTGCCTAGCATGTGTAGTTTAGC 59.690 47.826 0.00 0.00 41.91 3.09
494 495 2.540101 GCCTAGCATGTGTAGTTTAGCG 59.460 50.000 0.00 0.00 0.00 4.26
495 496 3.737047 GCCTAGCATGTGTAGTTTAGCGA 60.737 47.826 0.00 0.00 0.00 4.93
496 497 3.797256 CCTAGCATGTGTAGTTTAGCGAC 59.203 47.826 0.00 0.00 0.00 5.19
497 498 2.259618 AGCATGTGTAGTTTAGCGACG 58.740 47.619 0.00 0.00 0.00 5.12
498 499 1.266891 GCATGTGTAGTTTAGCGACGC 60.267 52.381 13.03 13.03 34.48 5.19
499 500 1.989864 CATGTGTAGTTTAGCGACGCA 59.010 47.619 23.70 5.17 44.76 5.24
500 501 2.137129 TGTGTAGTTTAGCGACGCAA 57.863 45.000 23.70 11.39 39.58 4.85
501 502 2.055838 TGTGTAGTTTAGCGACGCAAG 58.944 47.619 23.70 0.00 39.58 4.01
502 503 1.389106 GTGTAGTTTAGCGACGCAAGG 59.611 52.381 23.70 0.00 46.39 3.61
503 504 1.000060 TGTAGTTTAGCGACGCAAGGT 60.000 47.619 23.70 3.23 46.39 3.50
504 505 2.064014 GTAGTTTAGCGACGCAAGGTT 58.936 47.619 23.70 2.80 46.39 3.50
505 506 0.865769 AGTTTAGCGACGCAAGGTTG 59.134 50.000 23.70 0.00 46.39 3.77
519 520 2.689983 CAAGGTTGCAAGTATGATCCCC 59.310 50.000 0.00 0.00 0.00 4.81
520 521 1.922447 AGGTTGCAAGTATGATCCCCA 59.078 47.619 0.00 0.00 0.00 4.96
521 522 2.092212 AGGTTGCAAGTATGATCCCCAG 60.092 50.000 0.00 0.00 0.00 4.45
522 523 1.678101 GTTGCAAGTATGATCCCCAGC 59.322 52.381 0.00 0.00 0.00 4.85
523 524 1.216064 TGCAAGTATGATCCCCAGCT 58.784 50.000 0.00 0.00 0.00 4.24
524 525 1.134007 TGCAAGTATGATCCCCAGCTG 60.134 52.381 6.78 6.78 0.00 4.24
525 526 1.133976 GCAAGTATGATCCCCAGCTGT 60.134 52.381 13.81 0.00 0.00 4.40
526 527 2.843701 CAAGTATGATCCCCAGCTGTC 58.156 52.381 13.81 3.89 0.00 3.51
527 528 2.437281 CAAGTATGATCCCCAGCTGTCT 59.563 50.000 13.81 0.00 0.00 3.41
528 529 2.324541 AGTATGATCCCCAGCTGTCTC 58.675 52.381 13.81 4.19 0.00 3.36
529 530 2.090831 AGTATGATCCCCAGCTGTCTCT 60.091 50.000 13.81 1.88 0.00 3.10
530 531 1.890552 ATGATCCCCAGCTGTCTCTT 58.109 50.000 13.81 0.00 0.00 2.85
531 532 1.661463 TGATCCCCAGCTGTCTCTTT 58.339 50.000 13.81 0.00 0.00 2.52
532 533 1.988107 TGATCCCCAGCTGTCTCTTTT 59.012 47.619 13.81 0.00 0.00 2.27
533 534 2.376518 TGATCCCCAGCTGTCTCTTTTT 59.623 45.455 13.81 0.00 0.00 1.94
557 558 6.712179 TTTTGGTATTTTAAAGTCCCACGT 57.288 33.333 0.00 0.00 0.00 4.49
558 559 6.712179 TTTGGTATTTTAAAGTCCCACGTT 57.288 33.333 0.00 0.00 0.00 3.99
559 560 7.814264 TTTGGTATTTTAAAGTCCCACGTTA 57.186 32.000 0.00 0.00 0.00 3.18
560 561 7.437793 TTGGTATTTTAAAGTCCCACGTTAG 57.562 36.000 0.00 0.00 0.00 2.34
561 562 6.532826 TGGTATTTTAAAGTCCCACGTTAGT 58.467 36.000 0.00 0.00 0.00 2.24
562 563 7.675062 TGGTATTTTAAAGTCCCACGTTAGTA 58.325 34.615 0.00 0.00 0.00 1.82
563 564 7.818930 TGGTATTTTAAAGTCCCACGTTAGTAG 59.181 37.037 0.00 0.00 0.00 2.57
564 565 8.034804 GGTATTTTAAAGTCCCACGTTAGTAGA 58.965 37.037 0.00 0.00 0.00 2.59
565 566 9.080915 GTATTTTAAAGTCCCACGTTAGTAGAG 57.919 37.037 0.00 0.00 0.00 2.43
566 567 6.655078 TTTAAAGTCCCACGTTAGTAGAGT 57.345 37.500 0.00 0.00 0.00 3.24
567 568 6.655078 TTAAAGTCCCACGTTAGTAGAGTT 57.345 37.500 0.00 0.00 30.98 3.01
568 569 7.759489 TTAAAGTCCCACGTTAGTAGAGTTA 57.241 36.000 0.00 0.00 30.13 2.24
569 570 5.893897 AAGTCCCACGTTAGTAGAGTTAG 57.106 43.478 0.00 0.00 0.00 2.34
570 571 4.268359 AGTCCCACGTTAGTAGAGTTAGG 58.732 47.826 0.00 0.00 0.00 2.69
571 572 3.019564 TCCCACGTTAGTAGAGTTAGGC 58.980 50.000 0.00 0.00 0.00 3.93
572 573 2.223433 CCCACGTTAGTAGAGTTAGGCG 60.223 54.545 0.00 0.00 0.00 5.52
573 574 2.448219 CACGTTAGTAGAGTTAGGCGC 58.552 52.381 0.00 0.00 0.00 6.53
574 575 2.086869 ACGTTAGTAGAGTTAGGCGCA 58.913 47.619 10.83 0.00 0.00 6.09
575 576 2.097142 ACGTTAGTAGAGTTAGGCGCAG 59.903 50.000 10.83 0.00 0.00 5.18
588 589 3.409856 CGCAGCGATCCCGAATTT 58.590 55.556 9.98 0.00 38.22 1.82
589 590 1.010797 CGCAGCGATCCCGAATTTG 60.011 57.895 9.98 0.00 38.22 2.32
590 591 1.428370 CGCAGCGATCCCGAATTTGA 61.428 55.000 9.98 0.00 38.22 2.69
591 592 0.305922 GCAGCGATCCCGAATTTGAG 59.694 55.000 0.00 0.00 38.22 3.02
592 593 0.940126 CAGCGATCCCGAATTTGAGG 59.060 55.000 0.00 0.00 38.22 3.86
593 594 0.541863 AGCGATCCCGAATTTGAGGT 59.458 50.000 0.00 0.00 38.22 3.85
594 595 0.657840 GCGATCCCGAATTTGAGGTG 59.342 55.000 0.00 0.00 38.22 4.00
595 596 0.657840 CGATCCCGAATTTGAGGTGC 59.342 55.000 0.00 0.00 38.22 5.01
596 597 1.025041 GATCCCGAATTTGAGGTGCC 58.975 55.000 0.00 0.00 0.00 5.01
597 598 0.331278 ATCCCGAATTTGAGGTGCCA 59.669 50.000 0.00 0.00 0.00 4.92
598 599 0.608035 TCCCGAATTTGAGGTGCCAC 60.608 55.000 0.00 0.00 0.00 5.01
599 600 0.893270 CCCGAATTTGAGGTGCCACA 60.893 55.000 0.00 0.00 0.00 4.17
600 601 1.176527 CCGAATTTGAGGTGCCACAT 58.823 50.000 0.00 0.00 0.00 3.21
601 602 1.133025 CCGAATTTGAGGTGCCACATC 59.867 52.381 1.85 1.85 0.00 3.06
602 603 1.202065 CGAATTTGAGGTGCCACATCG 60.202 52.381 4.91 0.00 30.36 3.84
603 604 2.083774 GAATTTGAGGTGCCACATCGA 58.916 47.619 4.91 0.00 30.36 3.59
604 605 2.425143 ATTTGAGGTGCCACATCGAT 57.575 45.000 4.91 0.00 30.36 3.59
605 606 1.452110 TTTGAGGTGCCACATCGATG 58.548 50.000 23.68 23.68 30.36 3.84
606 607 0.612744 TTGAGGTGCCACATCGATGA 59.387 50.000 31.33 6.40 30.36 2.92
607 608 0.832626 TGAGGTGCCACATCGATGAT 59.167 50.000 31.33 13.04 30.36 2.45
608 609 1.202568 TGAGGTGCCACATCGATGATC 60.203 52.381 31.33 18.24 30.36 2.92
609 610 1.069823 GAGGTGCCACATCGATGATCT 59.930 52.381 31.33 14.58 0.00 2.75
610 611 1.487976 AGGTGCCACATCGATGATCTT 59.512 47.619 31.33 6.40 0.00 2.40
611 612 2.092753 AGGTGCCACATCGATGATCTTT 60.093 45.455 31.33 5.99 0.00 2.52
612 613 2.032550 GGTGCCACATCGATGATCTTTG 59.967 50.000 31.33 17.79 0.00 2.77
613 614 2.679837 GTGCCACATCGATGATCTTTGT 59.320 45.455 31.33 6.04 0.00 2.83
614 615 3.127548 GTGCCACATCGATGATCTTTGTT 59.872 43.478 31.33 3.59 0.00 2.83
615 616 3.758023 TGCCACATCGATGATCTTTGTTT 59.242 39.130 31.33 2.81 0.00 2.83
616 617 4.100529 GCCACATCGATGATCTTTGTTTG 58.899 43.478 31.33 15.00 0.00 2.93
617 618 4.665212 CCACATCGATGATCTTTGTTTGG 58.335 43.478 31.33 19.72 0.00 3.28
618 619 4.100529 CACATCGATGATCTTTGTTTGGC 58.899 43.478 31.33 0.00 0.00 4.52
619 620 3.758023 ACATCGATGATCTTTGTTTGGCA 59.242 39.130 31.33 0.00 0.00 4.92
620 621 4.218200 ACATCGATGATCTTTGTTTGGCAA 59.782 37.500 31.33 0.00 34.87 4.52
621 622 5.105635 ACATCGATGATCTTTGTTTGGCAAT 60.106 36.000 31.33 0.00 36.89 3.56
622 623 4.735985 TCGATGATCTTTGTTTGGCAATG 58.264 39.130 0.00 0.00 36.89 2.82
623 624 3.305094 CGATGATCTTTGTTTGGCAATGC 59.695 43.478 0.00 0.00 36.89 3.56
624 625 2.674954 TGATCTTTGTTTGGCAATGCG 58.325 42.857 0.00 0.00 36.89 4.73
625 626 1.391144 GATCTTTGTTTGGCAATGCGC 59.609 47.619 0.00 0.00 36.89 6.09
626 627 0.388659 TCTTTGTTTGGCAATGCGCT 59.611 45.000 9.73 0.00 41.91 5.92
627 628 0.785979 CTTTGTTTGGCAATGCGCTC 59.214 50.000 9.73 0.00 41.91 5.03
628 629 0.103755 TTTGTTTGGCAATGCGCTCA 59.896 45.000 9.73 0.00 41.91 4.26
629 630 0.103755 TTGTTTGGCAATGCGCTCAA 59.896 45.000 9.73 2.84 41.91 3.02
630 631 0.318869 TGTTTGGCAATGCGCTCAAG 60.319 50.000 9.73 0.00 41.91 3.02
631 632 1.010419 GTTTGGCAATGCGCTCAAGG 61.010 55.000 9.73 0.00 41.91 3.61
632 633 1.462731 TTTGGCAATGCGCTCAAGGT 61.463 50.000 9.73 0.00 41.91 3.50
633 634 1.462731 TTGGCAATGCGCTCAAGGTT 61.463 50.000 9.73 0.00 41.91 3.50
634 635 1.290009 GGCAATGCGCTCAAGGTTT 59.710 52.632 9.73 0.00 41.91 3.27
635 636 0.525761 GGCAATGCGCTCAAGGTTTA 59.474 50.000 9.73 0.00 41.91 2.01
636 637 1.067915 GGCAATGCGCTCAAGGTTTAA 60.068 47.619 9.73 0.00 41.91 1.52
637 638 2.609244 GGCAATGCGCTCAAGGTTTAAA 60.609 45.455 9.73 0.00 41.91 1.52
638 639 3.056304 GCAATGCGCTCAAGGTTTAAAA 58.944 40.909 9.73 0.00 37.77 1.52
639 640 3.679502 GCAATGCGCTCAAGGTTTAAAAT 59.320 39.130 9.73 0.00 37.77 1.82
640 641 4.862018 GCAATGCGCTCAAGGTTTAAAATA 59.138 37.500 9.73 0.00 37.77 1.40
641 642 5.004726 GCAATGCGCTCAAGGTTTAAAATAG 59.995 40.000 9.73 0.00 37.77 1.73
642 643 6.321717 CAATGCGCTCAAGGTTTAAAATAGA 58.678 36.000 9.73 0.00 0.00 1.98
643 644 5.291293 TGCGCTCAAGGTTTAAAATAGAC 57.709 39.130 9.73 0.00 0.00 2.59
644 645 4.155280 TGCGCTCAAGGTTTAAAATAGACC 59.845 41.667 9.73 0.00 0.00 3.85
645 646 4.726876 GCGCTCAAGGTTTAAAATAGACCG 60.727 45.833 0.00 0.00 38.48 4.79
646 647 4.201783 CGCTCAAGGTTTAAAATAGACCGG 60.202 45.833 0.00 0.00 38.48 5.28
647 648 4.939439 GCTCAAGGTTTAAAATAGACCGGA 59.061 41.667 9.46 0.00 38.48 5.14
648 649 5.413523 GCTCAAGGTTTAAAATAGACCGGAA 59.586 40.000 9.46 0.00 38.48 4.30
649 650 6.095021 GCTCAAGGTTTAAAATAGACCGGAAT 59.905 38.462 9.46 0.00 38.48 3.01
650 651 7.362660 GCTCAAGGTTTAAAATAGACCGGAATT 60.363 37.037 9.46 1.52 38.48 2.17
651 652 8.411991 TCAAGGTTTAAAATAGACCGGAATTT 57.588 30.769 9.46 8.42 38.48 1.82
652 653 9.517868 TCAAGGTTTAAAATAGACCGGAATTTA 57.482 29.630 9.46 3.21 38.48 1.40
660 661 8.959734 AAAATAGACCGGAATTTAAAAGTTCG 57.040 30.769 9.46 0.00 0.00 3.95
661 662 4.414999 AGACCGGAATTTAAAAGTTCGC 57.585 40.909 9.46 0.00 0.00 4.70
662 663 4.070009 AGACCGGAATTTAAAAGTTCGCT 58.930 39.130 9.46 0.00 0.00 4.93
663 664 4.083484 AGACCGGAATTTAAAAGTTCGCTG 60.083 41.667 9.46 0.00 0.00 5.18
664 665 3.566742 ACCGGAATTTAAAAGTTCGCTGT 59.433 39.130 9.46 0.00 0.00 4.40
665 666 3.911964 CCGGAATTTAAAAGTTCGCTGTG 59.088 43.478 0.00 0.00 0.00 3.66
666 667 3.360758 CGGAATTTAAAAGTTCGCTGTGC 59.639 43.478 0.00 0.00 0.00 4.57
667 668 4.546570 GGAATTTAAAAGTTCGCTGTGCT 58.453 39.130 0.00 0.00 0.00 4.40
668 669 4.382754 GGAATTTAAAAGTTCGCTGTGCTG 59.617 41.667 0.00 0.00 0.00 4.41
669 670 4.829064 ATTTAAAAGTTCGCTGTGCTGA 57.171 36.364 0.00 0.00 0.00 4.26
670 671 4.829064 TTTAAAAGTTCGCTGTGCTGAT 57.171 36.364 0.00 0.00 0.00 2.90
671 672 4.829064 TTAAAAGTTCGCTGTGCTGATT 57.171 36.364 0.00 0.00 0.00 2.57
672 673 3.715628 AAAAGTTCGCTGTGCTGATTT 57.284 38.095 0.00 0.00 0.00 2.17
673 674 2.977405 AAGTTCGCTGTGCTGATTTC 57.023 45.000 0.00 0.00 0.00 2.17
674 675 1.882912 AGTTCGCTGTGCTGATTTCA 58.117 45.000 0.00 0.00 0.00 2.69
675 676 1.802960 AGTTCGCTGTGCTGATTTCAG 59.197 47.619 3.13 3.13 46.40 3.02
676 677 1.532868 GTTCGCTGTGCTGATTTCAGT 59.467 47.619 9.21 0.00 45.45 3.41
677 678 1.432514 TCGCTGTGCTGATTTCAGTC 58.567 50.000 9.21 2.95 45.45 3.51
678 679 1.150827 CGCTGTGCTGATTTCAGTCA 58.849 50.000 9.21 8.00 45.45 3.41
679 680 1.532437 CGCTGTGCTGATTTCAGTCAA 59.468 47.619 9.21 0.00 45.45 3.18
680 681 2.031769 CGCTGTGCTGATTTCAGTCAAA 60.032 45.455 9.21 2.95 45.45 2.69
681 682 3.548616 CGCTGTGCTGATTTCAGTCAAAA 60.549 43.478 9.21 0.95 45.45 2.44
682 683 4.553323 GCTGTGCTGATTTCAGTCAAAAT 58.447 39.130 9.21 0.00 45.45 1.82
683 684 4.986659 GCTGTGCTGATTTCAGTCAAAATT 59.013 37.500 9.21 0.00 45.45 1.82
684 685 5.464389 GCTGTGCTGATTTCAGTCAAAATTT 59.536 36.000 9.21 0.00 45.45 1.82
685 686 6.642131 GCTGTGCTGATTTCAGTCAAAATTTA 59.358 34.615 9.21 0.00 45.45 1.40
686 687 7.148853 GCTGTGCTGATTTCAGTCAAAATTTAG 60.149 37.037 9.21 3.19 45.45 1.85
687 688 7.939782 TGTGCTGATTTCAGTCAAAATTTAGA 58.060 30.769 9.21 0.00 45.45 2.10
688 689 8.077991 TGTGCTGATTTCAGTCAAAATTTAGAG 58.922 33.333 9.21 0.00 45.45 2.43
689 690 8.078596 GTGCTGATTTCAGTCAAAATTTAGAGT 58.921 33.333 9.21 0.00 45.45 3.24
690 691 8.632679 TGCTGATTTCAGTCAAAATTTAGAGTT 58.367 29.630 9.21 0.00 45.45 3.01
691 692 9.468532 GCTGATTTCAGTCAAAATTTAGAGTTT 57.531 29.630 9.21 0.00 45.45 2.66
753 754 7.744087 AACTTTTTCCTTTGCAAAAGAAAGT 57.256 28.000 26.52 24.38 40.89 2.66
754 755 8.840833 AACTTTTTCCTTTGCAAAAGAAAGTA 57.159 26.923 26.52 19.98 40.89 2.24
755 756 8.251750 ACTTTTTCCTTTGCAAAAGAAAGTAC 57.748 30.769 26.52 0.00 40.89 2.73
756 757 8.094548 ACTTTTTCCTTTGCAAAAGAAAGTACT 58.905 29.630 26.52 13.74 40.89 2.73
757 758 8.840833 TTTTTCCTTTGCAAAAGAAAGTACTT 57.159 26.923 26.52 1.12 31.97 2.24
758 759 8.840833 TTTTCCTTTGCAAAAGAAAGTACTTT 57.159 26.923 26.52 20.67 41.09 2.66
759 760 8.840833 TTTCCTTTGCAAAAGAAAGTACTTTT 57.159 26.923 25.13 9.30 46.57 2.27
760 761 9.930693 TTTCCTTTGCAAAAGAAAGTACTTTTA 57.069 25.926 25.13 6.73 44.73 1.52
761 762 9.581099 TTCCTTTGCAAAAGAAAGTACTTTTAG 57.419 29.630 21.40 11.00 44.73 1.85
762 763 8.194769 TCCTTTGCAAAAGAAAGTACTTTTAGG 58.805 33.333 21.40 14.91 44.73 2.69
763 764 7.979537 CCTTTGCAAAAGAAAGTACTTTTAGGT 59.020 33.333 21.40 6.09 44.73 3.08
764 765 8.696410 TTTGCAAAAGAAAGTACTTTTAGGTG 57.304 30.769 21.40 17.00 44.73 4.00
765 766 7.399245 TGCAAAAGAAAGTACTTTTAGGTGT 57.601 32.000 21.40 0.00 44.73 4.16
766 767 7.477494 TGCAAAAGAAAGTACTTTTAGGTGTC 58.523 34.615 21.40 7.62 44.73 3.67
767 768 6.916387 GCAAAAGAAAGTACTTTTAGGTGTCC 59.084 38.462 21.40 6.79 44.73 4.02
768 769 7.415877 GCAAAAGAAAGTACTTTTAGGTGTCCA 60.416 37.037 21.40 0.00 44.73 4.02
769 770 8.463607 CAAAAGAAAGTACTTTTAGGTGTCCAA 58.536 33.333 21.40 0.00 44.73 3.53
770 771 8.584063 AAAGAAAGTACTTTTAGGTGTCCAAA 57.416 30.769 21.40 0.00 36.84 3.28
771 772 7.563888 AGAAAGTACTTTTAGGTGTCCAAAC 57.436 36.000 21.40 4.75 32.11 2.93
772 773 7.344134 AGAAAGTACTTTTAGGTGTCCAAACT 58.656 34.615 21.40 6.88 32.11 2.66
773 774 8.488668 AGAAAGTACTTTTAGGTGTCCAAACTA 58.511 33.333 21.40 0.00 32.11 2.24
774 775 9.281371 GAAAGTACTTTTAGGTGTCCAAACTAT 57.719 33.333 21.40 0.00 32.11 2.12
775 776 9.636789 AAAGTACTTTTAGGTGTCCAAACTATT 57.363 29.630 15.22 0.00 0.00 1.73
776 777 9.636789 AAGTACTTTTAGGTGTCCAAACTATTT 57.363 29.630 1.12 0.00 0.00 1.40
777 778 9.636789 AGTACTTTTAGGTGTCCAAACTATTTT 57.363 29.630 0.00 0.00 0.00 1.82
780 781 8.973182 ACTTTTAGGTGTCCAAACTATTTTTCA 58.027 29.630 0.00 0.00 0.00 2.69
781 782 9.463443 CTTTTAGGTGTCCAAACTATTTTTCAG 57.537 33.333 0.00 0.00 0.00 3.02
782 783 5.453567 AGGTGTCCAAACTATTTTTCAGC 57.546 39.130 0.00 0.00 0.00 4.26
783 784 4.892934 AGGTGTCCAAACTATTTTTCAGCA 59.107 37.500 0.00 0.00 0.00 4.41
784 785 5.362430 AGGTGTCCAAACTATTTTTCAGCAA 59.638 36.000 0.00 0.00 0.00 3.91
785 786 5.462068 GGTGTCCAAACTATTTTTCAGCAAC 59.538 40.000 0.00 0.00 0.00 4.17
786 787 6.273071 GTGTCCAAACTATTTTTCAGCAACT 58.727 36.000 0.00 0.00 0.00 3.16
787 788 7.422399 GTGTCCAAACTATTTTTCAGCAACTA 58.578 34.615 0.00 0.00 0.00 2.24
788 789 7.918562 GTGTCCAAACTATTTTTCAGCAACTAA 59.081 33.333 0.00 0.00 0.00 2.24
789 790 8.470805 TGTCCAAACTATTTTTCAGCAACTAAA 58.529 29.630 0.00 0.00 0.00 1.85
790 791 9.308318 GTCCAAACTATTTTTCAGCAACTAAAA 57.692 29.630 0.00 0.00 0.00 1.52
791 792 9.877178 TCCAAACTATTTTTCAGCAACTAAAAA 57.123 25.926 0.00 0.00 38.52 1.94
851 852 2.410466 AAAAAGGCAACGCTTCGGA 58.590 47.368 0.00 0.00 46.39 4.55
852 853 0.310854 AAAAAGGCAACGCTTCGGAG 59.689 50.000 0.00 0.00 46.39 4.63
853 854 0.818040 AAAAGGCAACGCTTCGGAGT 60.818 50.000 0.00 0.00 46.39 3.85
854 855 1.228657 AAAGGCAACGCTTCGGAGTC 61.229 55.000 0.00 0.00 46.39 3.36
855 856 3.479269 GGCAACGCTTCGGAGTCG 61.479 66.667 6.08 6.08 37.82 4.18
856 857 3.479269 GCAACGCTTCGGAGTCGG 61.479 66.667 11.36 0.00 36.95 4.79
857 858 2.049433 CAACGCTTCGGAGTCGGT 60.049 61.111 11.36 2.73 36.95 4.69
858 859 1.663702 CAACGCTTCGGAGTCGGTT 60.664 57.895 11.36 2.52 36.95 4.44
859 860 1.372623 AACGCTTCGGAGTCGGTTC 60.373 57.895 11.36 0.00 36.95 3.62
860 861 2.506438 CGCTTCGGAGTCGGTTCC 60.506 66.667 0.00 0.00 36.95 3.62
861 862 2.125633 GCTTCGGAGTCGGTTCCC 60.126 66.667 0.00 0.00 36.95 3.97
862 863 2.647158 GCTTCGGAGTCGGTTCCCT 61.647 63.158 0.00 0.00 36.95 4.20
863 864 1.318158 GCTTCGGAGTCGGTTCCCTA 61.318 60.000 0.00 0.00 36.95 3.53
864 865 1.400737 CTTCGGAGTCGGTTCCCTAT 58.599 55.000 0.00 0.00 36.95 2.57
865 866 2.579873 CTTCGGAGTCGGTTCCCTATA 58.420 52.381 0.00 0.00 36.95 1.31
866 867 2.267174 TCGGAGTCGGTTCCCTATAG 57.733 55.000 0.00 0.00 36.95 1.31
867 868 1.492176 TCGGAGTCGGTTCCCTATAGT 59.508 52.381 0.00 0.00 36.95 2.12
868 869 1.878734 CGGAGTCGGTTCCCTATAGTC 59.121 57.143 0.00 0.00 33.46 2.59
869 870 1.878734 GGAGTCGGTTCCCTATAGTCG 59.121 57.143 0.00 0.00 0.00 4.18
870 871 1.878734 GAGTCGGTTCCCTATAGTCGG 59.121 57.143 0.00 0.00 0.00 4.79
871 872 1.213926 AGTCGGTTCCCTATAGTCGGT 59.786 52.381 0.00 0.00 0.00 4.69
872 873 2.027385 GTCGGTTCCCTATAGTCGGTT 58.973 52.381 0.00 0.00 0.00 4.44
873 874 2.428530 GTCGGTTCCCTATAGTCGGTTT 59.571 50.000 0.00 0.00 0.00 3.27
874 875 3.099141 TCGGTTCCCTATAGTCGGTTTT 58.901 45.455 0.00 0.00 0.00 2.43
875 876 3.515104 TCGGTTCCCTATAGTCGGTTTTT 59.485 43.478 0.00 0.00 0.00 1.94
901 902 9.847706 TTTTTCAACCCTTTATTTTGCTTTTTC 57.152 25.926 0.00 0.00 0.00 2.29
902 903 8.800370 TTTCAACCCTTTATTTTGCTTTTTCT 57.200 26.923 0.00 0.00 0.00 2.52
903 904 8.800370 TTCAACCCTTTATTTTGCTTTTTCTT 57.200 26.923 0.00 0.00 0.00 2.52
904 905 8.800370 TCAACCCTTTATTTTGCTTTTTCTTT 57.200 26.923 0.00 0.00 0.00 2.52
905 906 8.672815 TCAACCCTTTATTTTGCTTTTTCTTTG 58.327 29.630 0.00 0.00 0.00 2.77
906 907 8.672815 CAACCCTTTATTTTGCTTTTTCTTTGA 58.327 29.630 0.00 0.00 0.00 2.69
907 908 8.208718 ACCCTTTATTTTGCTTTTTCTTTGAC 57.791 30.769 0.00 0.00 0.00 3.18
908 909 7.282224 ACCCTTTATTTTGCTTTTTCTTTGACC 59.718 33.333 0.00 0.00 0.00 4.02
909 910 7.344441 CCTTTATTTTGCTTTTTCTTTGACCG 58.656 34.615 0.00 0.00 0.00 4.79
910 911 7.223777 CCTTTATTTTGCTTTTTCTTTGACCGA 59.776 33.333 0.00 0.00 0.00 4.69
911 912 7.692908 TTATTTTGCTTTTTCTTTGACCGAG 57.307 32.000 0.00 0.00 0.00 4.63
912 913 2.774439 TGCTTTTTCTTTGACCGAGC 57.226 45.000 0.00 0.00 0.00 5.03
913 914 2.020720 TGCTTTTTCTTTGACCGAGCA 58.979 42.857 0.00 0.00 36.43 4.26
914 915 2.425312 TGCTTTTTCTTTGACCGAGCAA 59.575 40.909 0.00 0.00 35.91 3.91
915 916 2.789339 GCTTTTTCTTTGACCGAGCAAC 59.211 45.455 0.00 0.00 0.00 4.17
916 917 2.748461 TTTTCTTTGACCGAGCAACG 57.252 45.000 0.00 0.00 42.18 4.10
927 928 4.572571 AGCAACGGACGGGGCAAA 62.573 61.111 11.32 0.00 0.00 3.68
928 929 4.337060 GCAACGGACGGGGCAAAC 62.337 66.667 0.00 0.00 0.00 2.93
929 930 2.902846 CAACGGACGGGGCAAACA 60.903 61.111 0.00 0.00 0.00 2.83
930 931 2.903350 AACGGACGGGGCAAACAC 60.903 61.111 0.00 0.00 0.00 3.32
931 932 4.941309 ACGGACGGGGCAAACACC 62.941 66.667 0.00 0.00 0.00 4.16
932 933 4.636435 CGGACGGGGCAAACACCT 62.636 66.667 0.00 0.00 0.00 4.00
933 934 2.671963 GGACGGGGCAAACACCTC 60.672 66.667 0.00 0.00 0.00 3.85
934 935 2.671963 GACGGGGCAAACACCTCC 60.672 66.667 0.00 0.00 0.00 4.30
935 936 4.280019 ACGGGGCAAACACCTCCC 62.280 66.667 0.00 0.00 39.33 4.30
940 941 3.723348 GCAAACACCTCCCGCGTC 61.723 66.667 4.92 0.00 0.00 5.19
941 942 3.047877 CAAACACCTCCCGCGTCC 61.048 66.667 4.92 0.00 0.00 4.79
942 943 3.239253 AAACACCTCCCGCGTCCT 61.239 61.111 4.92 0.00 0.00 3.85
943 944 1.909781 AAACACCTCCCGCGTCCTA 60.910 57.895 4.92 0.00 0.00 2.94
944 945 1.474332 AAACACCTCCCGCGTCCTAA 61.474 55.000 4.92 0.00 0.00 2.69
945 946 1.262640 AACACCTCCCGCGTCCTAAT 61.263 55.000 4.92 0.00 0.00 1.73
946 947 1.067582 CACCTCCCGCGTCCTAATC 59.932 63.158 4.92 0.00 0.00 1.75
974 975 0.955919 CCTTCAACGCCCTTGACTCC 60.956 60.000 0.00 0.00 38.70 3.85
1062 1075 4.103103 CCGTCGAGCTCGCTGTCA 62.103 66.667 30.97 11.05 39.60 3.58
1074 1087 2.030562 CTGTCAAAGGCCGTCCGT 59.969 61.111 0.00 0.00 37.47 4.69
1319 1332 4.465446 CAGGGCGGAGGAGGAGGA 62.465 72.222 0.00 0.00 0.00 3.71
1554 1567 3.764160 CTGGGAGGCCGCCAAGATC 62.764 68.421 25.24 7.99 0.00 2.75
1626 1639 4.088762 CTGTTGCACGCCGCGATT 62.089 61.111 21.79 0.00 46.97 3.34
1746 1759 4.008933 GTCGAGCACTGGCAGGGT 62.009 66.667 19.62 12.77 44.61 4.34
1839 1855 1.009389 CAGCGACCTCTTCCGACAAC 61.009 60.000 0.00 0.00 0.00 3.32
1842 1858 1.419374 CGACCTCTTCCGACAACAAG 58.581 55.000 0.00 0.00 0.00 3.16
1856 1872 0.317479 AACAAGGACGAACCCGAGAG 59.683 55.000 0.00 0.00 40.05 3.20
1858 1874 2.991076 AAGGACGAACCCGAGAGCG 61.991 63.158 0.00 0.00 40.05 5.03
1866 1882 4.838486 CCCGAGAGCGCAGACGAC 62.838 72.222 11.47 0.32 43.93 4.34
1869 1885 3.800863 GAGAGCGCAGACGACGGA 61.801 66.667 11.47 0.00 43.93 4.69
1877 1896 0.798771 GCAGACGACGGAGATGACAC 60.799 60.000 0.00 0.00 0.00 3.67
1878 1897 0.521450 CAGACGACGGAGATGACACG 60.521 60.000 0.00 0.00 0.00 4.49
1939 1958 2.741985 TCGCATTGCCACAGACGG 60.742 61.111 2.41 0.00 0.00 4.79
2040 2059 0.902984 ACTACGACCATGACCAGCCA 60.903 55.000 0.00 0.00 0.00 4.75
2052 2071 2.589540 CAGCCACCGCCCAAGATA 59.410 61.111 0.00 0.00 34.57 1.98
2074 2093 1.414919 TCAAGGGCTACAAGTTCGTGT 59.585 47.619 0.00 0.00 35.43 4.49
2283 2302 3.119495 GCGTCCTGCACCTGAATTTTAAT 60.119 43.478 0.00 0.00 45.45 1.40
2320 2339 2.898705 ACAAGCGATGAGAGTGGATTC 58.101 47.619 0.00 0.00 0.00 2.52
2321 2340 2.499289 ACAAGCGATGAGAGTGGATTCT 59.501 45.455 0.00 0.00 0.00 2.40
2322 2341 3.055530 ACAAGCGATGAGAGTGGATTCTT 60.056 43.478 0.00 0.00 0.00 2.52
2323 2342 3.176552 AGCGATGAGAGTGGATTCTTG 57.823 47.619 0.00 0.00 0.00 3.02
2326 2345 3.686726 GCGATGAGAGTGGATTCTTGTTT 59.313 43.478 0.00 0.00 0.00 2.83
2336 2355 7.721399 AGAGTGGATTCTTGTTTGTTTACTGAT 59.279 33.333 0.00 0.00 0.00 2.90
2337 2356 7.875971 AGTGGATTCTTGTTTGTTTACTGATC 58.124 34.615 0.00 0.00 0.00 2.92
2339 2358 8.999431 GTGGATTCTTGTTTGTTTACTGATCTA 58.001 33.333 0.00 0.00 0.00 1.98
2340 2359 8.999431 TGGATTCTTGTTTGTTTACTGATCTAC 58.001 33.333 0.00 0.00 0.00 2.59
2347 2366 7.161404 TGTTTGTTTACTGATCTACTGATGCT 58.839 34.615 0.00 0.00 32.19 3.79
2352 2371 2.964464 ACTGATCTACTGATGCTCCAGG 59.036 50.000 9.97 0.00 38.44 4.45
2362 2381 4.151121 CTGATGCTCCAGGAGAAGAGATA 58.849 47.826 21.89 0.00 31.43 1.98
2363 2382 3.894427 TGATGCTCCAGGAGAAGAGATAC 59.106 47.826 21.89 0.00 31.43 2.24
2368 2387 4.222336 CTCCAGGAGAAGAGATACACCAT 58.778 47.826 11.62 0.00 31.43 3.55
2370 2389 5.141182 TCCAGGAGAAGAGATACACCATAC 58.859 45.833 0.00 0.00 0.00 2.39
2371 2390 5.103473 TCCAGGAGAAGAGATACACCATACT 60.103 44.000 0.00 0.00 0.00 2.12
2373 2392 6.778069 CCAGGAGAAGAGATACACCATACTTA 59.222 42.308 0.00 0.00 0.00 2.24
2374 2393 7.453126 CCAGGAGAAGAGATACACCATACTTAT 59.547 40.741 0.00 0.00 0.00 1.73
2407 2426 9.803315 TGACTGACTAAACACATATAGATGAAC 57.197 33.333 3.93 0.00 36.48 3.18
2408 2427 9.803315 GACTGACTAAACACATATAGATGAACA 57.197 33.333 3.93 0.00 36.48 3.18
2409 2428 9.809096 ACTGACTAAACACATATAGATGAACAG 57.191 33.333 3.93 0.00 36.48 3.16
2421 2446 9.899226 CATATAGATGAACAGATAGACGTTGAA 57.101 33.333 0.00 0.00 34.73 2.69
2424 2449 9.823647 ATAGATGAACAGATAGACGTTGAATTT 57.176 29.630 0.00 0.00 0.00 1.82
2450 2476 6.330004 TGTTAATCTGCTCTGAATTGCAAA 57.670 33.333 1.71 0.00 38.81 3.68
2525 2551 3.629438 GGTAACTCAGATCTACTCGGC 57.371 52.381 0.00 0.00 0.00 5.54
2531 2557 0.596083 CAGATCTACTCGGCCGCTTG 60.596 60.000 23.51 15.56 0.00 4.01
2545 2571 2.858646 GCCGCTTGGTTCAGTTTTTCTC 60.859 50.000 0.00 0.00 34.16 2.87
2549 2576 3.304057 GCTTGGTTCAGTTTTTCTCTCCG 60.304 47.826 0.00 0.00 0.00 4.63
2904 2934 4.651503 AGAACTCAGAAGAACAGAACCAGA 59.348 41.667 0.00 0.00 0.00 3.86
2974 3005 2.890766 CGTACACCACAGGGCCCTT 61.891 63.158 26.10 9.58 37.90 3.95
2996 3027 3.175240 CGCAGCTTCGACTCCACG 61.175 66.667 0.00 0.00 0.00 4.94
3134 3165 1.134280 CACAATGATTCTCTCGGGGCT 60.134 52.381 0.00 0.00 0.00 5.19
3299 3331 2.887568 GCTCGCAGACCACGATGG 60.888 66.667 0.00 0.00 45.02 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.548196 TGTATCGGTTGTAAGATTTTGATCC 57.452 36.000 0.00 0.00 0.00 3.36
2 3 9.046296 AGATGTATCGGTTGTAAGATTTTGATC 57.954 33.333 0.00 0.00 0.00 2.92
3 4 8.964476 AGATGTATCGGTTGTAAGATTTTGAT 57.036 30.769 0.00 0.00 0.00 2.57
5 6 8.883731 AGAAGATGTATCGGTTGTAAGATTTTG 58.116 33.333 0.00 0.00 0.00 2.44
6 7 9.449719 AAGAAGATGTATCGGTTGTAAGATTTT 57.550 29.630 0.00 0.00 0.00 1.82
7 8 9.449719 AAAGAAGATGTATCGGTTGTAAGATTT 57.550 29.630 0.00 0.00 0.00 2.17
8 9 9.099454 GAAAGAAGATGTATCGGTTGTAAGATT 57.901 33.333 0.00 0.00 0.00 2.40
9 10 8.478877 AGAAAGAAGATGTATCGGTTGTAAGAT 58.521 33.333 0.00 0.00 0.00 2.40
10 11 7.759886 CAGAAAGAAGATGTATCGGTTGTAAGA 59.240 37.037 0.00 0.00 0.00 2.10
11 12 7.464710 GCAGAAAGAAGATGTATCGGTTGTAAG 60.465 40.741 0.00 0.00 0.00 2.34
12 13 6.312918 GCAGAAAGAAGATGTATCGGTTGTAA 59.687 38.462 0.00 0.00 0.00 2.41
13 14 5.810587 GCAGAAAGAAGATGTATCGGTTGTA 59.189 40.000 0.00 0.00 0.00 2.41
14 15 4.631813 GCAGAAAGAAGATGTATCGGTTGT 59.368 41.667 0.00 0.00 0.00 3.32
15 16 4.872691 AGCAGAAAGAAGATGTATCGGTTG 59.127 41.667 0.00 0.00 0.00 3.77
16 17 5.091261 AGCAGAAAGAAGATGTATCGGTT 57.909 39.130 0.00 0.00 0.00 4.44
17 18 4.404073 AGAGCAGAAAGAAGATGTATCGGT 59.596 41.667 0.00 0.00 0.00 4.69
18 19 4.942852 AGAGCAGAAAGAAGATGTATCGG 58.057 43.478 0.00 0.00 0.00 4.18
19 20 6.855914 GTCTAGAGCAGAAAGAAGATGTATCG 59.144 42.308 0.00 0.00 34.17 2.92
20 21 6.855914 CGTCTAGAGCAGAAAGAAGATGTATC 59.144 42.308 0.00 0.00 34.17 2.24
21 22 6.734137 CGTCTAGAGCAGAAAGAAGATGTAT 58.266 40.000 0.00 0.00 34.17 2.29
22 23 5.449314 GCGTCTAGAGCAGAAAGAAGATGTA 60.449 44.000 0.00 0.00 34.17 2.29
23 24 4.676723 GCGTCTAGAGCAGAAAGAAGATGT 60.677 45.833 0.00 0.00 34.17 3.06
24 25 3.796178 GCGTCTAGAGCAGAAAGAAGATG 59.204 47.826 0.00 0.00 34.17 2.90
25 26 3.445450 TGCGTCTAGAGCAGAAAGAAGAT 59.555 43.478 11.38 0.00 40.01 2.40
26 27 2.820197 TGCGTCTAGAGCAGAAAGAAGA 59.180 45.455 11.38 0.00 40.01 2.87
27 28 3.223423 TGCGTCTAGAGCAGAAAGAAG 57.777 47.619 11.38 0.00 40.01 2.85
36 37 0.528684 GGTGTGGATGCGTCTAGAGC 60.529 60.000 5.77 4.24 0.00 4.09
37 38 1.107114 AGGTGTGGATGCGTCTAGAG 58.893 55.000 5.77 0.00 0.00 2.43
38 39 1.204704 CAAGGTGTGGATGCGTCTAGA 59.795 52.381 5.77 0.00 0.00 2.43
39 40 1.204704 TCAAGGTGTGGATGCGTCTAG 59.795 52.381 5.77 0.00 0.00 2.43
40 41 1.262417 TCAAGGTGTGGATGCGTCTA 58.738 50.000 5.77 0.00 0.00 2.59
41 42 0.615331 ATCAAGGTGTGGATGCGTCT 59.385 50.000 5.77 0.00 0.00 4.18
42 43 0.729116 CATCAAGGTGTGGATGCGTC 59.271 55.000 0.00 0.00 35.03 5.19
43 44 2.858622 CATCAAGGTGTGGATGCGT 58.141 52.632 0.00 0.00 35.03 5.24
46 47 0.323633 TGGGCATCAAGGTGTGGATG 60.324 55.000 0.00 0.00 42.92 3.51
47 48 0.323725 GTGGGCATCAAGGTGTGGAT 60.324 55.000 0.00 0.00 0.00 3.41
48 49 1.074775 GTGGGCATCAAGGTGTGGA 59.925 57.895 0.00 0.00 0.00 4.02
49 50 1.978617 GGTGGGCATCAAGGTGTGG 60.979 63.158 0.00 0.00 0.00 4.17
50 51 1.978617 GGGTGGGCATCAAGGTGTG 60.979 63.158 0.00 0.00 0.00 3.82
51 52 2.440599 GGGTGGGCATCAAGGTGT 59.559 61.111 0.00 0.00 0.00 4.16
52 53 2.362889 GGGGTGGGCATCAAGGTG 60.363 66.667 0.00 0.00 0.00 4.00
53 54 2.169810 AAGGGGTGGGCATCAAGGT 61.170 57.895 0.00 0.00 0.00 3.50
54 55 1.683365 CAAGGGGTGGGCATCAAGG 60.683 63.158 0.00 0.00 0.00 3.61
55 56 2.353610 GCAAGGGGTGGGCATCAAG 61.354 63.158 0.00 0.00 0.00 3.02
56 57 2.283821 GCAAGGGGTGGGCATCAA 60.284 61.111 0.00 0.00 0.00 2.57
57 58 4.380945 GGCAAGGGGTGGGCATCA 62.381 66.667 0.00 0.00 0.00 3.07
58 59 4.066139 AGGCAAGGGGTGGGCATC 62.066 66.667 0.00 0.00 0.00 3.91
59 60 4.066139 GAGGCAAGGGGTGGGCAT 62.066 66.667 0.00 0.00 0.00 4.40
61 62 4.748144 CAGAGGCAAGGGGTGGGC 62.748 72.222 0.00 0.00 0.00 5.36
62 63 4.748144 GCAGAGGCAAGGGGTGGG 62.748 72.222 0.00 0.00 40.72 4.61
63 64 3.215587 AAGCAGAGGCAAGGGGTGG 62.216 63.158 0.00 0.00 44.61 4.61
64 65 1.676967 GAAGCAGAGGCAAGGGGTG 60.677 63.158 0.00 0.00 44.61 4.61
65 66 2.759795 GAAGCAGAGGCAAGGGGT 59.240 61.111 0.00 0.00 44.61 4.95
66 67 2.437359 CGAAGCAGAGGCAAGGGG 60.437 66.667 0.00 0.00 44.61 4.79
67 68 1.743252 GTCGAAGCAGAGGCAAGGG 60.743 63.158 0.00 0.00 44.61 3.95
68 69 2.097038 CGTCGAAGCAGAGGCAAGG 61.097 63.158 0.00 0.00 44.61 3.61
69 70 2.097038 CCGTCGAAGCAGAGGCAAG 61.097 63.158 0.00 0.00 44.61 4.01
70 71 2.048222 CCGTCGAAGCAGAGGCAA 60.048 61.111 0.00 0.00 44.61 4.52
71 72 3.303135 ACCGTCGAAGCAGAGGCA 61.303 61.111 0.00 0.00 44.61 4.75
72 73 2.811317 CACCGTCGAAGCAGAGGC 60.811 66.667 0.00 0.00 41.61 4.70
73 74 1.444553 GTCACCGTCGAAGCAGAGG 60.445 63.158 0.00 0.00 0.00 3.69
74 75 1.797933 CGTCACCGTCGAAGCAGAG 60.798 63.158 0.00 0.00 0.00 3.35
75 76 2.254350 CGTCACCGTCGAAGCAGA 59.746 61.111 0.00 0.00 0.00 4.26
76 77 2.805353 CCGTCACCGTCGAAGCAG 60.805 66.667 0.00 0.00 0.00 4.24
79 80 3.103911 GTGCCGTCACCGTCGAAG 61.104 66.667 0.00 0.00 37.24 3.79
80 81 2.902759 TTTGTGCCGTCACCGTCGAA 62.903 55.000 0.00 0.00 42.46 3.71
81 82 3.427598 TTTGTGCCGTCACCGTCGA 62.428 57.895 0.00 0.00 42.46 4.20
82 83 2.938823 CTTTGTGCCGTCACCGTCG 61.939 63.158 0.00 0.00 42.46 5.12
83 84 1.828331 GACTTTGTGCCGTCACCGTC 61.828 60.000 0.00 0.00 42.46 4.79
84 85 1.885850 GACTTTGTGCCGTCACCGT 60.886 57.895 0.00 0.00 42.46 4.83
85 86 1.557443 GAGACTTTGTGCCGTCACCG 61.557 60.000 0.00 0.00 42.46 4.94
86 87 0.249911 AGAGACTTTGTGCCGTCACC 60.250 55.000 0.00 0.00 42.46 4.02
87 88 0.861837 CAGAGACTTTGTGCCGTCAC 59.138 55.000 0.00 0.00 43.40 3.67
88 89 0.249868 CCAGAGACTTTGTGCCGTCA 60.250 55.000 0.00 0.00 32.68 4.35
89 90 0.249911 ACCAGAGACTTTGTGCCGTC 60.250 55.000 0.00 0.00 0.00 4.79
90 91 0.532862 CACCAGAGACTTTGTGCCGT 60.533 55.000 0.00 0.00 0.00 5.68
91 92 0.249868 TCACCAGAGACTTTGTGCCG 60.250 55.000 0.00 0.00 0.00 5.69
92 93 1.967319 TTCACCAGAGACTTTGTGCC 58.033 50.000 0.00 0.00 0.00 5.01
93 94 3.057946 GGATTTCACCAGAGACTTTGTGC 60.058 47.826 0.00 0.00 0.00 4.57
94 95 4.392940 AGGATTTCACCAGAGACTTTGTG 58.607 43.478 0.00 0.00 0.00 3.33
95 96 4.713792 AGGATTTCACCAGAGACTTTGT 57.286 40.909 0.00 0.00 0.00 2.83
96 97 4.633565 GCTAGGATTTCACCAGAGACTTTG 59.366 45.833 0.00 0.00 0.00 2.77
97 98 4.534103 AGCTAGGATTTCACCAGAGACTTT 59.466 41.667 0.00 0.00 0.00 2.66
98 99 4.100373 AGCTAGGATTTCACCAGAGACTT 58.900 43.478 0.00 0.00 0.00 3.01
99 100 3.704061 GAGCTAGGATTTCACCAGAGACT 59.296 47.826 0.00 0.00 0.00 3.24
100 101 3.704061 AGAGCTAGGATTTCACCAGAGAC 59.296 47.826 0.00 0.00 0.00 3.36
101 102 3.703556 CAGAGCTAGGATTTCACCAGAGA 59.296 47.826 0.00 0.00 0.00 3.10
102 103 3.740764 GCAGAGCTAGGATTTCACCAGAG 60.741 52.174 0.00 0.00 0.00 3.35
103 104 2.169352 GCAGAGCTAGGATTTCACCAGA 59.831 50.000 0.00 0.00 0.00 3.86
104 105 2.559440 GCAGAGCTAGGATTTCACCAG 58.441 52.381 0.00 0.00 0.00 4.00
105 106 1.210478 GGCAGAGCTAGGATTTCACCA 59.790 52.381 0.00 0.00 0.00 4.17
106 107 1.488393 AGGCAGAGCTAGGATTTCACC 59.512 52.381 0.00 0.00 0.00 4.02
107 108 2.169352 TGAGGCAGAGCTAGGATTTCAC 59.831 50.000 0.00 0.00 0.00 3.18
108 109 2.433604 CTGAGGCAGAGCTAGGATTTCA 59.566 50.000 0.00 0.00 32.44 2.69
109 110 2.697751 TCTGAGGCAGAGCTAGGATTTC 59.302 50.000 0.00 0.00 35.39 2.17
110 111 2.756907 TCTGAGGCAGAGCTAGGATTT 58.243 47.619 0.00 0.00 35.39 2.17
111 112 2.468301 TCTGAGGCAGAGCTAGGATT 57.532 50.000 0.00 0.00 35.39 3.01
120 121 1.611474 ATTCGCAGCTCTGAGGCAGA 61.611 55.000 6.83 0.00 38.25 4.26
121 122 1.152989 GATTCGCAGCTCTGAGGCAG 61.153 60.000 6.83 0.00 34.17 4.85
122 123 1.153489 GATTCGCAGCTCTGAGGCA 60.153 57.895 6.83 0.00 34.17 4.75
123 124 0.461693 AAGATTCGCAGCTCTGAGGC 60.462 55.000 6.83 1.31 0.00 4.70
124 125 1.136695 AGAAGATTCGCAGCTCTGAGG 59.863 52.381 6.83 0.00 0.00 3.86
125 126 2.099592 AGAGAAGATTCGCAGCTCTGAG 59.900 50.000 0.00 0.00 34.85 3.35
126 127 2.098614 AGAGAAGATTCGCAGCTCTGA 58.901 47.619 0.29 0.00 34.85 3.27
127 128 2.582728 AGAGAAGATTCGCAGCTCTG 57.417 50.000 0.00 0.00 34.85 3.35
128 129 2.479389 CGAAGAGAAGATTCGCAGCTCT 60.479 50.000 0.00 0.00 42.51 4.09
129 130 1.851666 CGAAGAGAAGATTCGCAGCTC 59.148 52.381 0.00 0.00 42.51 4.09
130 131 1.474478 TCGAAGAGAAGATTCGCAGCT 59.526 47.619 3.35 0.00 46.93 4.24
131 132 1.914634 TCGAAGAGAAGATTCGCAGC 58.085 50.000 3.35 0.00 46.93 5.25
145 146 6.758416 TGTACCATCAATTCATCTTCTCGAAG 59.242 38.462 0.22 0.22 39.71 3.79
146 147 6.639563 TGTACCATCAATTCATCTTCTCGAA 58.360 36.000 0.00 0.00 0.00 3.71
147 148 6.220726 TGTACCATCAATTCATCTTCTCGA 57.779 37.500 0.00 0.00 0.00 4.04
148 149 6.908870 TTGTACCATCAATTCATCTTCTCG 57.091 37.500 0.00 0.00 0.00 4.04
149 150 9.346725 GTTTTTGTACCATCAATTCATCTTCTC 57.653 33.333 0.00 0.00 0.00 2.87
150 151 9.082313 AGTTTTTGTACCATCAATTCATCTTCT 57.918 29.630 0.00 0.00 0.00 2.85
179 180 9.806203 CTGACATCAGGCATTTATTATTTTCAA 57.194 29.630 0.58 0.00 40.20 2.69
195 196 5.745803 CATGTGCATGTACCTGACATCAGG 61.746 50.000 23.71 23.71 46.33 3.86
196 197 2.976589 TGTGCATGTACCTGACATCAG 58.023 47.619 11.66 1.63 46.33 2.90
197 198 3.272581 CATGTGCATGTACCTGACATCA 58.727 45.455 12.69 0.00 46.33 3.07
198 199 2.615447 CCATGTGCATGTACCTGACATC 59.385 50.000 18.24 0.00 46.33 3.06
200 201 1.627834 TCCATGTGCATGTACCTGACA 59.372 47.619 18.24 4.50 43.97 3.58
201 202 2.401583 TCCATGTGCATGTACCTGAC 57.598 50.000 18.24 0.00 37.11 3.51
202 203 3.431673 TTTCCATGTGCATGTACCTGA 57.568 42.857 18.24 6.87 37.11 3.86
203 204 4.517952 TTTTTCCATGTGCATGTACCTG 57.482 40.909 11.66 11.49 37.11 4.00
204 205 6.095440 GTCTATTTTTCCATGTGCATGTACCT 59.905 38.462 11.66 0.00 37.11 3.08
205 206 6.127758 TGTCTATTTTTCCATGTGCATGTACC 60.128 38.462 11.66 0.00 37.11 3.34
206 207 6.851609 TGTCTATTTTTCCATGTGCATGTAC 58.148 36.000 7.03 7.03 37.11 2.90
207 208 7.643569 ATGTCTATTTTTCCATGTGCATGTA 57.356 32.000 10.76 0.00 37.11 2.29
208 209 5.981088 TGTCTATTTTTCCATGTGCATGT 57.019 34.783 10.76 0.00 37.11 3.21
209 210 7.837202 AAATGTCTATTTTTCCATGTGCATG 57.163 32.000 5.26 5.26 32.70 4.06
233 234 9.806203 CATCATCAACTAGAATTGCCATAAAAA 57.194 29.630 0.00 0.00 0.00 1.94
234 235 9.187996 TCATCATCAACTAGAATTGCCATAAAA 57.812 29.630 0.00 0.00 0.00 1.52
235 236 8.750515 TCATCATCAACTAGAATTGCCATAAA 57.249 30.769 0.00 0.00 0.00 1.40
236 237 8.929260 ATCATCATCAACTAGAATTGCCATAA 57.071 30.769 0.00 0.00 0.00 1.90
238 239 8.929260 TTATCATCATCAACTAGAATTGCCAT 57.071 30.769 0.00 0.00 0.00 4.40
239 240 8.929260 ATTATCATCATCAACTAGAATTGCCA 57.071 30.769 0.00 0.00 0.00 4.92
264 265 9.349713 AGGAATTGATGTACTTGTAGACAAAAA 57.650 29.630 0.00 0.00 35.15 1.94
265 266 8.918202 AGGAATTGATGTACTTGTAGACAAAA 57.082 30.769 0.00 0.00 35.15 2.44
266 267 8.918202 AAGGAATTGATGTACTTGTAGACAAA 57.082 30.769 0.00 0.00 35.15 2.83
267 268 9.653287 CTAAGGAATTGATGTACTTGTAGACAA 57.347 33.333 0.00 0.00 0.00 3.18
268 269 9.031537 TCTAAGGAATTGATGTACTTGTAGACA 57.968 33.333 0.00 0.00 0.00 3.41
269 270 9.871238 TTCTAAGGAATTGATGTACTTGTAGAC 57.129 33.333 0.00 0.00 0.00 2.59
312 313 1.741706 AGTTCGCTCATGGCAAATCTG 59.258 47.619 0.00 0.00 41.91 2.90
313 314 2.119801 AGTTCGCTCATGGCAAATCT 57.880 45.000 0.00 0.00 41.91 2.40
314 315 2.523015 CAAGTTCGCTCATGGCAAATC 58.477 47.619 0.00 0.00 41.91 2.17
315 316 1.403249 GCAAGTTCGCTCATGGCAAAT 60.403 47.619 0.00 0.00 41.91 2.32
316 317 0.039256 GCAAGTTCGCTCATGGCAAA 60.039 50.000 0.00 0.00 41.91 3.68
317 318 1.580942 GCAAGTTCGCTCATGGCAA 59.419 52.632 0.00 0.00 41.91 4.52
318 319 2.334946 GGCAAGTTCGCTCATGGCA 61.335 57.895 6.92 0.00 41.91 4.92
319 320 1.660560 ATGGCAAGTTCGCTCATGGC 61.661 55.000 0.00 0.00 38.68 4.40
320 321 0.813184 AATGGCAAGTTCGCTCATGG 59.187 50.000 0.00 0.00 0.00 3.66
321 322 1.741706 AGAATGGCAAGTTCGCTCATG 59.258 47.619 0.00 0.00 0.00 3.07
322 323 2.012673 GAGAATGGCAAGTTCGCTCAT 58.987 47.619 0.00 0.00 0.00 2.90
323 324 1.270785 TGAGAATGGCAAGTTCGCTCA 60.271 47.619 6.22 0.00 0.00 4.26
324 325 1.442769 TGAGAATGGCAAGTTCGCTC 58.557 50.000 6.22 0.00 0.00 5.03
325 326 1.896220 TTGAGAATGGCAAGTTCGCT 58.104 45.000 6.22 0.00 0.00 4.93
326 327 2.704725 TTTGAGAATGGCAAGTTCGC 57.295 45.000 0.00 0.00 0.00 4.70
327 328 4.358851 TGTTTTTGAGAATGGCAAGTTCG 58.641 39.130 0.00 0.00 0.00 3.95
328 329 6.660887 TTTGTTTTTGAGAATGGCAAGTTC 57.339 33.333 0.00 0.00 0.00 3.01
329 330 8.907222 ATATTTGTTTTTGAGAATGGCAAGTT 57.093 26.923 0.00 0.00 0.00 2.66
330 331 9.995003 TTATATTTGTTTTTGAGAATGGCAAGT 57.005 25.926 0.00 0.00 0.00 3.16
375 376 9.685828 CTTTGAAATTTTACCGACATTTTCCTA 57.314 29.630 0.00 0.00 0.00 2.94
376 377 7.170828 GCTTTGAAATTTTACCGACATTTTCCT 59.829 33.333 0.00 0.00 0.00 3.36
377 378 7.170828 AGCTTTGAAATTTTACCGACATTTTCC 59.829 33.333 0.00 0.00 0.00 3.13
378 379 8.003784 CAGCTTTGAAATTTTACCGACATTTTC 58.996 33.333 0.00 0.00 0.00 2.29
379 380 7.042119 CCAGCTTTGAAATTTTACCGACATTTT 60.042 33.333 0.00 0.00 0.00 1.82
380 381 6.423604 CCAGCTTTGAAATTTTACCGACATTT 59.576 34.615 0.00 0.00 0.00 2.32
381 382 5.925969 CCAGCTTTGAAATTTTACCGACATT 59.074 36.000 0.00 0.00 0.00 2.71
382 383 5.242838 TCCAGCTTTGAAATTTTACCGACAT 59.757 36.000 0.00 0.00 0.00 3.06
383 384 4.580995 TCCAGCTTTGAAATTTTACCGACA 59.419 37.500 0.00 0.00 0.00 4.35
384 385 4.915667 GTCCAGCTTTGAAATTTTACCGAC 59.084 41.667 0.00 0.00 0.00 4.79
385 386 4.319911 CGTCCAGCTTTGAAATTTTACCGA 60.320 41.667 0.00 0.00 0.00 4.69
386 387 3.911964 CGTCCAGCTTTGAAATTTTACCG 59.088 43.478 0.00 0.00 0.00 4.02
387 388 4.866921 ACGTCCAGCTTTGAAATTTTACC 58.133 39.130 0.00 0.00 0.00 2.85
388 389 4.611366 CGACGTCCAGCTTTGAAATTTTAC 59.389 41.667 10.58 0.00 0.00 2.01
389 390 4.778904 CGACGTCCAGCTTTGAAATTTTA 58.221 39.130 10.58 0.00 0.00 1.52
390 391 3.628017 CGACGTCCAGCTTTGAAATTTT 58.372 40.909 10.58 0.00 0.00 1.82
391 392 2.604614 GCGACGTCCAGCTTTGAAATTT 60.605 45.455 10.58 0.00 0.00 1.82
392 393 1.069227 GCGACGTCCAGCTTTGAAATT 60.069 47.619 10.58 0.00 0.00 1.82
393 394 0.517316 GCGACGTCCAGCTTTGAAAT 59.483 50.000 10.58 0.00 0.00 2.17
394 395 1.827315 CGCGACGTCCAGCTTTGAAA 61.827 55.000 10.58 0.00 0.00 2.69
395 396 2.307309 CGCGACGTCCAGCTTTGAA 61.307 57.895 10.58 0.00 0.00 2.69
396 397 2.733218 CGCGACGTCCAGCTTTGA 60.733 61.111 10.58 0.00 0.00 2.69
397 398 1.279527 TAACGCGACGTCCAGCTTTG 61.280 55.000 15.93 0.00 39.99 2.77
398 399 0.389426 ATAACGCGACGTCCAGCTTT 60.389 50.000 15.93 10.79 39.99 3.51
399 400 1.076533 CATAACGCGACGTCCAGCTT 61.077 55.000 15.93 7.49 39.99 3.74
400 401 1.516386 CATAACGCGACGTCCAGCT 60.516 57.895 15.93 0.00 39.99 4.24
401 402 1.804326 ACATAACGCGACGTCCAGC 60.804 57.895 15.93 7.71 39.99 4.85
402 403 1.410737 CCACATAACGCGACGTCCAG 61.411 60.000 15.93 6.68 39.99 3.86
403 404 1.444724 CCACATAACGCGACGTCCA 60.445 57.895 15.93 0.00 39.99 4.02
404 405 1.010419 AACCACATAACGCGACGTCC 61.010 55.000 15.93 1.77 39.99 4.79
405 406 1.616620 TAACCACATAACGCGACGTC 58.383 50.000 15.93 5.18 39.99 4.34
406 407 2.063156 TTAACCACATAACGCGACGT 57.937 45.000 15.93 0.01 43.97 4.34
407 408 3.644805 ATTTAACCACATAACGCGACG 57.355 42.857 15.93 0.00 0.00 5.12
408 409 5.453281 TGTATTTAACCACATAACGCGAC 57.547 39.130 15.93 0.00 0.00 5.19
409 410 6.535865 AGAATGTATTTAACCACATAACGCGA 59.464 34.615 15.93 0.00 34.32 5.87
410 411 6.711579 AGAATGTATTTAACCACATAACGCG 58.288 36.000 3.53 3.53 34.32 6.01
411 412 6.844279 CGAGAATGTATTTAACCACATAACGC 59.156 38.462 2.39 2.48 34.32 4.84
412 413 6.844279 GCGAGAATGTATTTAACCACATAACG 59.156 38.462 2.39 8.52 34.32 3.18
413 414 7.916552 AGCGAGAATGTATTTAACCACATAAC 58.083 34.615 2.39 1.65 34.32 1.89
414 415 8.500753 AAGCGAGAATGTATTTAACCACATAA 57.499 30.769 2.39 0.00 34.32 1.90
415 416 8.500753 AAAGCGAGAATGTATTTAACCACATA 57.499 30.769 2.39 0.00 34.32 2.29
416 417 7.391148 AAAGCGAGAATGTATTTAACCACAT 57.609 32.000 0.00 0.00 36.96 3.21
417 418 6.811253 AAAGCGAGAATGTATTTAACCACA 57.189 33.333 0.00 0.00 0.00 4.17
418 419 9.783256 ATTAAAAGCGAGAATGTATTTAACCAC 57.217 29.630 0.00 0.00 0.00 4.16
424 425 9.906660 TGACAAATTAAAAGCGAGAATGTATTT 57.093 25.926 0.00 0.00 0.00 1.40
425 426 9.906660 TTGACAAATTAAAAGCGAGAATGTATT 57.093 25.926 0.00 0.00 0.00 1.89
426 427 9.559958 CTTGACAAATTAAAAGCGAGAATGTAT 57.440 29.630 0.00 0.00 0.00 2.29
427 428 8.779303 TCTTGACAAATTAAAAGCGAGAATGTA 58.221 29.630 0.00 0.00 0.00 2.29
428 429 7.648142 TCTTGACAAATTAAAAGCGAGAATGT 58.352 30.769 0.00 0.00 0.00 2.71
429 430 8.506140 TTCTTGACAAATTAAAAGCGAGAATG 57.494 30.769 0.00 0.00 0.00 2.67
431 432 9.825972 CTATTCTTGACAAATTAAAAGCGAGAA 57.174 29.630 0.00 0.00 32.24 2.87
432 433 7.962918 GCTATTCTTGACAAATTAAAAGCGAGA 59.037 33.333 0.00 0.00 0.00 4.04
433 434 7.965107 AGCTATTCTTGACAAATTAAAAGCGAG 59.035 33.333 0.00 0.00 0.00 5.03
434 435 7.816640 AGCTATTCTTGACAAATTAAAAGCGA 58.183 30.769 0.00 0.00 0.00 4.93
435 436 9.722056 ATAGCTATTCTTGACAAATTAAAAGCG 57.278 29.630 0.00 0.00 0.00 4.68
445 446 9.809096 CTCTAAACAGATAGCTATTCTTGACAA 57.191 33.333 7.87 0.00 0.00 3.18
446 447 8.972127 ACTCTAAACAGATAGCTATTCTTGACA 58.028 33.333 7.87 0.00 0.00 3.58
447 448 9.243637 CACTCTAAACAGATAGCTATTCTTGAC 57.756 37.037 7.87 0.00 0.00 3.18
448 449 7.923344 GCACTCTAAACAGATAGCTATTCTTGA 59.077 37.037 7.87 0.59 0.00 3.02
449 450 7.170658 GGCACTCTAAACAGATAGCTATTCTTG 59.829 40.741 7.87 9.54 0.00 3.02
450 451 7.070571 AGGCACTCTAAACAGATAGCTATTCTT 59.929 37.037 7.87 2.28 0.00 2.52
451 452 6.553100 AGGCACTCTAAACAGATAGCTATTCT 59.447 38.462 7.87 3.93 0.00 2.40
452 453 6.754193 AGGCACTCTAAACAGATAGCTATTC 58.246 40.000 7.87 1.57 0.00 1.75
453 454 6.739331 AGGCACTCTAAACAGATAGCTATT 57.261 37.500 7.87 0.00 0.00 1.73
454 455 6.071616 GCTAGGCACTCTAAACAGATAGCTAT 60.072 42.308 5.76 5.76 41.75 2.97
455 456 5.241949 GCTAGGCACTCTAAACAGATAGCTA 59.758 44.000 0.00 0.00 41.75 3.32
456 457 4.038642 GCTAGGCACTCTAAACAGATAGCT 59.961 45.833 0.00 0.00 41.75 3.32
457 458 4.202161 TGCTAGGCACTCTAAACAGATAGC 60.202 45.833 0.00 0.00 41.75 2.97
458 459 5.521906 TGCTAGGCACTCTAAACAGATAG 57.478 43.478 0.00 0.00 41.75 2.08
459 460 5.363868 ACATGCTAGGCACTCTAAACAGATA 59.636 40.000 0.00 0.00 43.04 1.98
460 461 4.163078 ACATGCTAGGCACTCTAAACAGAT 59.837 41.667 0.00 0.00 43.04 2.90
461 462 3.515502 ACATGCTAGGCACTCTAAACAGA 59.484 43.478 0.00 0.00 43.04 3.41
462 463 3.620374 CACATGCTAGGCACTCTAAACAG 59.380 47.826 0.00 0.00 43.04 3.16
463 464 3.007940 ACACATGCTAGGCACTCTAAACA 59.992 43.478 0.00 0.00 43.04 2.83
464 465 3.600388 ACACATGCTAGGCACTCTAAAC 58.400 45.455 0.00 0.00 43.04 2.01
465 466 3.981071 ACACATGCTAGGCACTCTAAA 57.019 42.857 0.00 0.00 43.04 1.85
466 467 4.023980 ACTACACATGCTAGGCACTCTAA 58.976 43.478 0.00 0.00 43.04 2.10
467 468 3.632333 ACTACACATGCTAGGCACTCTA 58.368 45.455 0.00 0.00 43.04 2.43
468 469 2.461695 ACTACACATGCTAGGCACTCT 58.538 47.619 0.00 0.00 43.04 3.24
469 470 2.969628 ACTACACATGCTAGGCACTC 57.030 50.000 0.00 0.00 43.04 3.51
470 471 3.703001 AAACTACACATGCTAGGCACT 57.297 42.857 0.00 0.00 43.04 4.40
471 472 3.309954 GCTAAACTACACATGCTAGGCAC 59.690 47.826 0.00 0.00 43.04 5.01
472 473 3.531538 GCTAAACTACACATGCTAGGCA 58.468 45.455 0.00 0.00 44.86 4.75
473 474 2.540101 CGCTAAACTACACATGCTAGGC 59.460 50.000 0.00 0.00 0.00 3.93
474 475 3.797256 GTCGCTAAACTACACATGCTAGG 59.203 47.826 0.00 0.00 0.00 3.02
475 476 3.482472 CGTCGCTAAACTACACATGCTAG 59.518 47.826 0.00 0.00 0.00 3.42
476 477 3.431856 CGTCGCTAAACTACACATGCTA 58.568 45.455 0.00 0.00 0.00 3.49
477 478 2.259618 CGTCGCTAAACTACACATGCT 58.740 47.619 0.00 0.00 0.00 3.79
478 479 1.266891 GCGTCGCTAAACTACACATGC 60.267 52.381 10.68 0.00 0.00 4.06
479 480 1.989864 TGCGTCGCTAAACTACACATG 59.010 47.619 19.50 0.00 0.00 3.21
480 481 2.357327 TGCGTCGCTAAACTACACAT 57.643 45.000 19.50 0.00 0.00 3.21
481 482 2.055838 CTTGCGTCGCTAAACTACACA 58.944 47.619 19.50 0.00 0.00 3.72
482 483 1.389106 CCTTGCGTCGCTAAACTACAC 59.611 52.381 19.50 0.00 0.00 2.90
483 484 1.000060 ACCTTGCGTCGCTAAACTACA 60.000 47.619 19.50 0.00 0.00 2.74
484 485 1.706443 ACCTTGCGTCGCTAAACTAC 58.294 50.000 19.50 0.00 0.00 2.73
485 486 2.063266 CAACCTTGCGTCGCTAAACTA 58.937 47.619 19.50 0.00 0.00 2.24
486 487 0.865769 CAACCTTGCGTCGCTAAACT 59.134 50.000 19.50 0.00 0.00 2.66
487 488 0.724785 GCAACCTTGCGTCGCTAAAC 60.725 55.000 19.50 0.00 45.11 2.01
488 489 1.572447 GCAACCTTGCGTCGCTAAA 59.428 52.632 19.50 4.20 45.11 1.85
489 490 3.249999 GCAACCTTGCGTCGCTAA 58.750 55.556 19.50 10.02 45.11 3.09
498 499 2.689983 GGGGATCATACTTGCAACCTTG 59.310 50.000 0.00 0.00 0.00 3.61
499 500 2.311542 TGGGGATCATACTTGCAACCTT 59.688 45.455 0.00 0.00 0.00 3.50
500 501 1.922447 TGGGGATCATACTTGCAACCT 59.078 47.619 0.00 0.00 0.00 3.50
501 502 2.301346 CTGGGGATCATACTTGCAACC 58.699 52.381 0.00 0.00 0.00 3.77
502 503 1.678101 GCTGGGGATCATACTTGCAAC 59.322 52.381 0.00 0.00 0.00 4.17
503 504 1.565759 AGCTGGGGATCATACTTGCAA 59.434 47.619 0.00 0.00 0.00 4.08
504 505 1.134007 CAGCTGGGGATCATACTTGCA 60.134 52.381 5.57 0.00 0.00 4.08
505 506 1.133976 ACAGCTGGGGATCATACTTGC 60.134 52.381 19.93 0.00 0.00 4.01
506 507 2.437281 AGACAGCTGGGGATCATACTTG 59.563 50.000 19.93 0.00 0.00 3.16
507 508 2.703007 GAGACAGCTGGGGATCATACTT 59.297 50.000 19.93 0.00 0.00 2.24
508 509 2.090831 AGAGACAGCTGGGGATCATACT 60.091 50.000 19.93 4.91 0.00 2.12
509 510 2.324541 AGAGACAGCTGGGGATCATAC 58.675 52.381 19.93 2.78 0.00 2.39
510 511 2.783379 AGAGACAGCTGGGGATCATA 57.217 50.000 19.93 0.00 0.00 2.15
511 512 1.890552 AAGAGACAGCTGGGGATCAT 58.109 50.000 19.93 0.22 0.00 2.45
512 513 1.661463 AAAGAGACAGCTGGGGATCA 58.339 50.000 19.93 0.00 0.00 2.92
513 514 2.797177 AAAAGAGACAGCTGGGGATC 57.203 50.000 19.93 6.29 0.00 3.36
533 534 7.110043 ACGTGGGACTTTAAAATACCAAAAA 57.890 32.000 1.24 0.00 0.00 1.94
534 535 6.712179 ACGTGGGACTTTAAAATACCAAAA 57.288 33.333 1.24 0.00 0.00 2.44
535 536 6.712179 AACGTGGGACTTTAAAATACCAAA 57.288 33.333 1.24 0.00 0.00 3.28
536 537 6.997476 ACTAACGTGGGACTTTAAAATACCAA 59.003 34.615 1.24 0.00 0.00 3.67
537 538 6.532826 ACTAACGTGGGACTTTAAAATACCA 58.467 36.000 0.00 0.00 0.00 3.25
538 539 8.034804 TCTACTAACGTGGGACTTTAAAATACC 58.965 37.037 0.00 0.00 0.00 2.73
539 540 8.986477 TCTACTAACGTGGGACTTTAAAATAC 57.014 34.615 0.00 0.00 0.00 1.89
540 541 8.806146 ACTCTACTAACGTGGGACTTTAAAATA 58.194 33.333 0.00 0.00 0.00 1.40
541 542 7.674120 ACTCTACTAACGTGGGACTTTAAAAT 58.326 34.615 0.00 0.00 0.00 1.82
542 543 7.054491 ACTCTACTAACGTGGGACTTTAAAA 57.946 36.000 0.00 0.00 0.00 1.52
543 544 6.655078 ACTCTACTAACGTGGGACTTTAAA 57.345 37.500 0.00 0.00 0.00 1.52
544 545 6.655078 AACTCTACTAACGTGGGACTTTAA 57.345 37.500 0.00 0.00 0.00 1.52
545 546 6.375455 CCTAACTCTACTAACGTGGGACTTTA 59.625 42.308 0.00 0.00 0.00 1.85
546 547 5.184671 CCTAACTCTACTAACGTGGGACTTT 59.815 44.000 0.00 0.00 0.00 2.66
547 548 4.704057 CCTAACTCTACTAACGTGGGACTT 59.296 45.833 0.00 0.00 0.00 3.01
548 549 4.268359 CCTAACTCTACTAACGTGGGACT 58.732 47.826 0.00 0.00 0.00 3.85
549 550 3.181492 GCCTAACTCTACTAACGTGGGAC 60.181 52.174 0.00 0.00 0.00 4.46
550 551 3.019564 GCCTAACTCTACTAACGTGGGA 58.980 50.000 0.00 0.00 0.00 4.37
551 552 2.223433 CGCCTAACTCTACTAACGTGGG 60.223 54.545 0.00 0.00 0.00 4.61
552 553 2.793933 GCGCCTAACTCTACTAACGTGG 60.794 54.545 0.00 0.00 0.00 4.94
553 554 2.159476 TGCGCCTAACTCTACTAACGTG 60.159 50.000 4.18 0.00 0.00 4.49
554 555 2.086869 TGCGCCTAACTCTACTAACGT 58.913 47.619 4.18 0.00 0.00 3.99
555 556 2.717530 CTGCGCCTAACTCTACTAACG 58.282 52.381 4.18 0.00 0.00 3.18
556 557 2.461903 GCTGCGCCTAACTCTACTAAC 58.538 52.381 4.18 0.00 0.00 2.34
557 558 1.065102 CGCTGCGCCTAACTCTACTAA 59.935 52.381 9.88 0.00 0.00 2.24
558 559 0.661552 CGCTGCGCCTAACTCTACTA 59.338 55.000 9.88 0.00 0.00 1.82
559 560 1.030488 TCGCTGCGCCTAACTCTACT 61.030 55.000 18.65 0.00 0.00 2.57
560 561 0.030908 ATCGCTGCGCCTAACTCTAC 59.969 55.000 18.65 0.00 0.00 2.59
561 562 0.311165 GATCGCTGCGCCTAACTCTA 59.689 55.000 18.65 0.00 0.00 2.43
562 563 1.066587 GATCGCTGCGCCTAACTCT 59.933 57.895 18.65 0.00 0.00 3.24
563 564 1.951631 GGATCGCTGCGCCTAACTC 60.952 63.158 18.65 6.59 0.00 3.01
564 565 2.107141 GGATCGCTGCGCCTAACT 59.893 61.111 18.65 0.00 0.00 2.24
565 566 2.967615 GGGATCGCTGCGCCTAAC 60.968 66.667 18.65 5.39 0.00 2.34
566 567 4.585526 CGGGATCGCTGCGCCTAA 62.586 66.667 18.65 0.00 0.00 2.69
570 571 2.823829 AAATTCGGGATCGCTGCGC 61.824 57.895 18.65 0.00 36.13 6.09
571 572 1.010797 CAAATTCGGGATCGCTGCG 60.011 57.895 17.25 17.25 36.13 5.18
572 573 0.305922 CTCAAATTCGGGATCGCTGC 59.694 55.000 8.28 0.00 36.13 5.25
573 574 0.940126 CCTCAAATTCGGGATCGCTG 59.060 55.000 8.28 2.03 36.13 5.18
574 575 0.541863 ACCTCAAATTCGGGATCGCT 59.458 50.000 8.28 0.00 36.13 4.93
575 576 0.657840 CACCTCAAATTCGGGATCGC 59.342 55.000 0.00 0.00 36.13 4.58
576 577 0.657840 GCACCTCAAATTCGGGATCG 59.342 55.000 0.00 0.00 37.82 3.69
577 578 1.025041 GGCACCTCAAATTCGGGATC 58.975 55.000 0.00 0.00 0.00 3.36
578 579 0.331278 TGGCACCTCAAATTCGGGAT 59.669 50.000 0.00 0.00 0.00 3.85
579 580 0.608035 GTGGCACCTCAAATTCGGGA 60.608 55.000 6.29 0.00 0.00 5.14
580 581 0.893270 TGTGGCACCTCAAATTCGGG 60.893 55.000 16.26 0.00 0.00 5.14
581 582 1.133025 GATGTGGCACCTCAAATTCGG 59.867 52.381 16.26 0.00 0.00 4.30
582 583 1.202065 CGATGTGGCACCTCAAATTCG 60.202 52.381 20.43 11.26 0.00 3.34
583 584 2.083774 TCGATGTGGCACCTCAAATTC 58.916 47.619 20.43 4.42 0.00 2.17
584 585 2.198827 TCGATGTGGCACCTCAAATT 57.801 45.000 20.43 0.00 0.00 1.82
585 586 2.019249 CATCGATGTGGCACCTCAAAT 58.981 47.619 20.43 11.47 0.00 2.32
586 587 1.003003 TCATCGATGTGGCACCTCAAA 59.997 47.619 24.09 9.85 0.00 2.69
587 588 0.612744 TCATCGATGTGGCACCTCAA 59.387 50.000 24.09 4.91 0.00 3.02
588 589 0.832626 ATCATCGATGTGGCACCTCA 59.167 50.000 24.09 9.75 0.00 3.86
589 590 1.069823 AGATCATCGATGTGGCACCTC 59.930 52.381 24.09 14.06 0.00 3.85
590 591 1.126488 AGATCATCGATGTGGCACCT 58.874 50.000 24.09 4.83 0.00 4.00
591 592 1.959042 AAGATCATCGATGTGGCACC 58.041 50.000 24.09 8.79 0.00 5.01
592 593 2.679837 ACAAAGATCATCGATGTGGCAC 59.320 45.455 24.09 11.55 0.00 5.01
593 594 2.989909 ACAAAGATCATCGATGTGGCA 58.010 42.857 24.09 6.13 0.00 4.92
594 595 4.100529 CAAACAAAGATCATCGATGTGGC 58.899 43.478 24.09 14.42 0.00 5.01
595 596 4.665212 CCAAACAAAGATCATCGATGTGG 58.335 43.478 24.09 16.58 0.00 4.17
596 597 4.100529 GCCAAACAAAGATCATCGATGTG 58.899 43.478 24.09 16.75 0.00 3.21
597 598 3.758023 TGCCAAACAAAGATCATCGATGT 59.242 39.130 24.09 12.20 0.00 3.06
598 599 4.359971 TGCCAAACAAAGATCATCGATG 57.640 40.909 19.61 19.61 0.00 3.84
599 600 5.345702 CATTGCCAAACAAAGATCATCGAT 58.654 37.500 0.00 0.00 42.86 3.59
600 601 4.735985 CATTGCCAAACAAAGATCATCGA 58.264 39.130 0.00 0.00 42.86 3.59
601 602 3.305094 GCATTGCCAAACAAAGATCATCG 59.695 43.478 0.00 0.00 42.86 3.84
602 603 3.305094 CGCATTGCCAAACAAAGATCATC 59.695 43.478 2.41 0.00 42.86 2.92
603 604 3.255725 CGCATTGCCAAACAAAGATCAT 58.744 40.909 2.41 0.00 42.86 2.45
604 605 2.674954 CGCATTGCCAAACAAAGATCA 58.325 42.857 2.41 0.00 42.86 2.92
605 606 1.391144 GCGCATTGCCAAACAAAGATC 59.609 47.619 0.30 0.00 42.86 2.75
606 607 1.431496 GCGCATTGCCAAACAAAGAT 58.569 45.000 0.30 0.00 42.86 2.40
607 608 2.897780 GCGCATTGCCAAACAAAGA 58.102 47.368 0.30 0.00 42.86 2.52
617 618 2.346099 TTAAACCTTGAGCGCATTGC 57.654 45.000 11.47 0.00 46.98 3.56
618 619 6.251376 GTCTATTTTAAACCTTGAGCGCATTG 59.749 38.462 11.47 0.00 0.00 2.82
619 620 6.322491 GTCTATTTTAAACCTTGAGCGCATT 58.678 36.000 11.47 0.00 0.00 3.56
620 621 5.163652 GGTCTATTTTAAACCTTGAGCGCAT 60.164 40.000 11.47 0.00 0.00 4.73
621 622 4.155280 GGTCTATTTTAAACCTTGAGCGCA 59.845 41.667 11.47 0.00 0.00 6.09
622 623 4.659088 GGTCTATTTTAAACCTTGAGCGC 58.341 43.478 0.00 0.00 0.00 5.92
623 624 4.201783 CCGGTCTATTTTAAACCTTGAGCG 60.202 45.833 17.79 17.79 41.52 5.03
624 625 4.939439 TCCGGTCTATTTTAAACCTTGAGC 59.061 41.667 0.00 0.00 0.00 4.26
625 626 7.625828 ATTCCGGTCTATTTTAAACCTTGAG 57.374 36.000 0.00 0.00 0.00 3.02
626 627 8.411991 AAATTCCGGTCTATTTTAAACCTTGA 57.588 30.769 0.00 0.00 0.00 3.02
635 636 7.539710 GCGAACTTTTAAATTCCGGTCTATTTT 59.460 33.333 0.00 0.00 0.00 1.82
636 637 7.025365 GCGAACTTTTAAATTCCGGTCTATTT 58.975 34.615 0.00 9.03 0.00 1.40
637 638 6.373495 AGCGAACTTTTAAATTCCGGTCTATT 59.627 34.615 0.00 0.00 0.00 1.73
638 639 5.878669 AGCGAACTTTTAAATTCCGGTCTAT 59.121 36.000 0.00 0.00 0.00 1.98
639 640 5.121142 CAGCGAACTTTTAAATTCCGGTCTA 59.879 40.000 0.00 0.00 0.00 2.59
640 641 4.070009 AGCGAACTTTTAAATTCCGGTCT 58.930 39.130 0.00 0.00 0.00 3.85
641 642 4.156182 CAGCGAACTTTTAAATTCCGGTC 58.844 43.478 0.00 0.00 0.00 4.79
642 643 3.566742 ACAGCGAACTTTTAAATTCCGGT 59.433 39.130 0.00 0.00 0.00 5.28
643 644 3.911964 CACAGCGAACTTTTAAATTCCGG 59.088 43.478 0.00 0.00 0.00 5.14
644 645 3.360758 GCACAGCGAACTTTTAAATTCCG 59.639 43.478 0.00 0.00 0.00 4.30
645 646 4.382754 CAGCACAGCGAACTTTTAAATTCC 59.617 41.667 0.00 0.00 0.00 3.01
646 647 5.212194 TCAGCACAGCGAACTTTTAAATTC 58.788 37.500 0.00 0.00 0.00 2.17
647 648 5.181690 TCAGCACAGCGAACTTTTAAATT 57.818 34.783 0.00 0.00 0.00 1.82
648 649 4.829064 TCAGCACAGCGAACTTTTAAAT 57.171 36.364 0.00 0.00 0.00 1.40
649 650 4.829064 ATCAGCACAGCGAACTTTTAAA 57.171 36.364 0.00 0.00 0.00 1.52
650 651 4.829064 AATCAGCACAGCGAACTTTTAA 57.171 36.364 0.00 0.00 0.00 1.52
651 652 4.274705 TGAAATCAGCACAGCGAACTTTTA 59.725 37.500 0.00 0.00 0.00 1.52
652 653 3.066621 TGAAATCAGCACAGCGAACTTTT 59.933 39.130 0.00 0.00 0.00 2.27
653 654 2.618241 TGAAATCAGCACAGCGAACTTT 59.382 40.909 0.00 0.00 0.00 2.66
654 655 2.221169 TGAAATCAGCACAGCGAACTT 58.779 42.857 0.00 0.00 0.00 2.66
655 656 1.802960 CTGAAATCAGCACAGCGAACT 59.197 47.619 0.00 0.00 37.15 3.01
656 657 2.238245 CTGAAATCAGCACAGCGAAC 57.762 50.000 0.00 0.00 37.15 3.95
727 728 9.278978 ACTTTCTTTTGCAAAGGAAAAAGTTAA 57.721 25.926 34.71 20.17 45.94 2.01
728 729 8.840833 ACTTTCTTTTGCAAAGGAAAAAGTTA 57.159 26.923 34.71 20.71 45.94 2.24
729 730 7.744087 ACTTTCTTTTGCAAAGGAAAAAGTT 57.256 28.000 34.71 22.67 45.94 2.66
730 731 8.094548 AGTACTTTCTTTTGCAAAGGAAAAAGT 58.905 29.630 34.71 31.72 45.94 2.66
731 732 8.479313 AGTACTTTCTTTTGCAAAGGAAAAAG 57.521 30.769 34.71 29.11 46.80 2.27
732 733 8.840833 AAGTACTTTCTTTTGCAAAGGAAAAA 57.159 26.923 34.71 26.81 41.44 1.94
733 734 8.840833 AAAGTACTTTCTTTTGCAAAGGAAAA 57.159 26.923 34.71 24.85 41.44 2.29
734 735 8.840833 AAAAGTACTTTCTTTTGCAAAGGAAA 57.159 26.923 33.84 33.84 43.24 3.13
735 736 9.581099 CTAAAAGTACTTTCTTTTGCAAAGGAA 57.419 29.630 27.20 27.20 44.15 3.36
736 737 8.194769 CCTAAAAGTACTTTCTTTTGCAAAGGA 58.805 33.333 20.78 19.03 44.15 3.36
737 738 7.979537 ACCTAAAAGTACTTTCTTTTGCAAAGG 59.020 33.333 20.78 14.74 44.15 3.11
738 739 8.807581 CACCTAAAAGTACTTTCTTTTGCAAAG 58.192 33.333 20.78 7.09 44.15 2.77
739 740 8.308207 ACACCTAAAAGTACTTTCTTTTGCAAA 58.692 29.630 20.78 8.05 44.15 3.68
740 741 7.832769 ACACCTAAAAGTACTTTCTTTTGCAA 58.167 30.769 20.78 0.00 44.15 4.08
741 742 7.399245 ACACCTAAAAGTACTTTCTTTTGCA 57.601 32.000 20.78 0.00 44.15 4.08
742 743 6.916387 GGACACCTAAAAGTACTTTCTTTTGC 59.084 38.462 20.78 11.43 44.15 3.68
743 744 7.992008 TGGACACCTAAAAGTACTTTCTTTTG 58.008 34.615 20.78 16.71 44.15 2.44
744 745 8.584063 TTGGACACCTAAAAGTACTTTCTTTT 57.416 30.769 20.78 8.28 45.59 2.27
745 746 8.464404 GTTTGGACACCTAAAAGTACTTTCTTT 58.536 33.333 20.78 8.63 39.00 2.52
746 747 7.832685 AGTTTGGACACCTAAAAGTACTTTCTT 59.167 33.333 20.78 9.34 31.45 2.52
747 748 7.344134 AGTTTGGACACCTAAAAGTACTTTCT 58.656 34.615 20.78 13.19 31.45 2.52
748 749 7.563888 AGTTTGGACACCTAAAAGTACTTTC 57.436 36.000 20.78 6.96 31.45 2.62
749 750 9.636789 AATAGTTTGGACACCTAAAAGTACTTT 57.363 29.630 15.22 15.22 0.00 2.66
750 751 9.636789 AAATAGTTTGGACACCTAAAAGTACTT 57.363 29.630 1.12 1.12 0.00 2.24
751 752 9.636789 AAAATAGTTTGGACACCTAAAAGTACT 57.363 29.630 0.00 0.00 0.00 2.73
754 755 8.973182 TGAAAAATAGTTTGGACACCTAAAAGT 58.027 29.630 0.00 0.00 0.00 2.66
755 756 9.463443 CTGAAAAATAGTTTGGACACCTAAAAG 57.537 33.333 0.00 0.00 0.00 2.27
756 757 7.923878 GCTGAAAAATAGTTTGGACACCTAAAA 59.076 33.333 0.00 0.00 0.00 1.52
757 758 7.068839 TGCTGAAAAATAGTTTGGACACCTAAA 59.931 33.333 0.00 0.00 0.00 1.85
758 759 6.547880 TGCTGAAAAATAGTTTGGACACCTAA 59.452 34.615 0.00 0.00 0.00 2.69
759 760 6.065374 TGCTGAAAAATAGTTTGGACACCTA 58.935 36.000 0.00 0.00 0.00 3.08
760 761 4.892934 TGCTGAAAAATAGTTTGGACACCT 59.107 37.500 0.00 0.00 0.00 4.00
761 762 5.195001 TGCTGAAAAATAGTTTGGACACC 57.805 39.130 0.00 0.00 0.00 4.16
762 763 6.273071 AGTTGCTGAAAAATAGTTTGGACAC 58.727 36.000 0.00 0.00 0.00 3.67
763 764 6.463995 AGTTGCTGAAAAATAGTTTGGACA 57.536 33.333 0.00 0.00 0.00 4.02
764 765 8.865590 TTTAGTTGCTGAAAAATAGTTTGGAC 57.134 30.769 0.00 0.00 0.00 4.02
765 766 9.877178 TTTTTAGTTGCTGAAAAATAGTTTGGA 57.123 25.926 0.00 0.00 31.34 3.53
833 834 0.310854 CTCCGAAGCGTTGCCTTTTT 59.689 50.000 0.00 0.00 0.00 1.94
834 835 0.818040 ACTCCGAAGCGTTGCCTTTT 60.818 50.000 0.00 0.00 0.00 2.27
835 836 1.227853 ACTCCGAAGCGTTGCCTTT 60.228 52.632 0.00 0.00 0.00 3.11
836 837 1.668151 GACTCCGAAGCGTTGCCTT 60.668 57.895 0.00 0.00 0.00 4.35
837 838 2.048127 GACTCCGAAGCGTTGCCT 60.048 61.111 0.00 0.00 0.00 4.75
838 839 3.479269 CGACTCCGAAGCGTTGCC 61.479 66.667 0.00 0.00 38.22 4.52
839 840 3.479269 CCGACTCCGAAGCGTTGC 61.479 66.667 0.00 0.00 38.22 4.17
840 841 1.615107 GAACCGACTCCGAAGCGTTG 61.615 60.000 0.00 0.00 38.22 4.10
841 842 1.372623 GAACCGACTCCGAAGCGTT 60.373 57.895 0.00 0.00 38.22 4.84
842 843 2.257676 GAACCGACTCCGAAGCGT 59.742 61.111 0.00 0.00 38.22 5.07
843 844 2.506438 GGAACCGACTCCGAAGCG 60.506 66.667 0.00 0.00 38.22 4.68
844 845 2.125633 GGGAACCGACTCCGAAGC 60.126 66.667 0.00 0.00 40.86 3.86
875 876 9.847706 GAAAAAGCAAAATAAAGGGTTGAAAAA 57.152 25.926 0.00 0.00 0.00 1.94
876 877 9.237187 AGAAAAAGCAAAATAAAGGGTTGAAAA 57.763 25.926 0.00 0.00 0.00 2.29
877 878 8.800370 AGAAAAAGCAAAATAAAGGGTTGAAA 57.200 26.923 0.00 0.00 0.00 2.69
878 879 8.800370 AAGAAAAAGCAAAATAAAGGGTTGAA 57.200 26.923 0.00 0.00 0.00 2.69
879 880 8.672815 CAAAGAAAAAGCAAAATAAAGGGTTGA 58.327 29.630 0.00 0.00 0.00 3.18
880 881 8.672815 TCAAAGAAAAAGCAAAATAAAGGGTTG 58.327 29.630 0.00 0.00 0.00 3.77
881 882 8.673711 GTCAAAGAAAAAGCAAAATAAAGGGTT 58.326 29.630 0.00 0.00 0.00 4.11
882 883 7.282224 GGTCAAAGAAAAAGCAAAATAAAGGGT 59.718 33.333 0.00 0.00 0.00 4.34
883 884 7.518211 CGGTCAAAGAAAAAGCAAAATAAAGGG 60.518 37.037 0.00 0.00 0.00 3.95
884 885 7.223777 TCGGTCAAAGAAAAAGCAAAATAAAGG 59.776 33.333 0.00 0.00 0.00 3.11
885 886 8.125728 TCGGTCAAAGAAAAAGCAAAATAAAG 57.874 30.769 0.00 0.00 0.00 1.85
886 887 7.254286 GCTCGGTCAAAGAAAAAGCAAAATAAA 60.254 33.333 0.00 0.00 0.00 1.40
887 888 6.200097 GCTCGGTCAAAGAAAAAGCAAAATAA 59.800 34.615 0.00 0.00 0.00 1.40
888 889 5.689961 GCTCGGTCAAAGAAAAAGCAAAATA 59.310 36.000 0.00 0.00 0.00 1.40
889 890 4.507756 GCTCGGTCAAAGAAAAAGCAAAAT 59.492 37.500 0.00 0.00 0.00 1.82
890 891 3.862845 GCTCGGTCAAAGAAAAAGCAAAA 59.137 39.130 0.00 0.00 0.00 2.44
891 892 3.119316 TGCTCGGTCAAAGAAAAAGCAAA 60.119 39.130 0.00 0.00 35.52 3.68
892 893 2.425312 TGCTCGGTCAAAGAAAAAGCAA 59.575 40.909 0.00 0.00 35.52 3.91
893 894 2.020720 TGCTCGGTCAAAGAAAAAGCA 58.979 42.857 0.00 0.00 36.04 3.91
894 895 2.774439 TGCTCGGTCAAAGAAAAAGC 57.226 45.000 0.00 0.00 0.00 3.51
895 896 3.035942 CGTTGCTCGGTCAAAGAAAAAG 58.964 45.455 0.00 0.00 35.71 2.27
896 897 3.059634 CGTTGCTCGGTCAAAGAAAAA 57.940 42.857 0.00 0.00 35.71 1.94
897 898 2.748461 CGTTGCTCGGTCAAAGAAAA 57.252 45.000 0.00 0.00 35.71 2.29
910 911 4.572571 TTTGCCCCGTCCGTTGCT 62.573 61.111 0.00 0.00 0.00 3.91
911 912 4.337060 GTTTGCCCCGTCCGTTGC 62.337 66.667 0.00 0.00 0.00 4.17
912 913 2.902846 TGTTTGCCCCGTCCGTTG 60.903 61.111 0.00 0.00 0.00 4.10
913 914 2.903350 GTGTTTGCCCCGTCCGTT 60.903 61.111 0.00 0.00 0.00 4.44
914 915 4.941309 GGTGTTTGCCCCGTCCGT 62.941 66.667 0.00 0.00 0.00 4.69
915 916 4.636435 AGGTGTTTGCCCCGTCCG 62.636 66.667 0.00 0.00 0.00 4.79
916 917 2.671963 GAGGTGTTTGCCCCGTCC 60.672 66.667 0.00 0.00 0.00 4.79
917 918 2.671963 GGAGGTGTTTGCCCCGTC 60.672 66.667 0.00 0.00 0.00 4.79
918 919 4.280019 GGGAGGTGTTTGCCCCGT 62.280 66.667 0.00 0.00 35.76 5.28
923 924 3.723348 GACGCGGGAGGTGTTTGC 61.723 66.667 12.47 0.00 40.09 3.68
924 925 2.162338 TAGGACGCGGGAGGTGTTTG 62.162 60.000 12.47 0.00 40.09 2.93
925 926 1.474332 TTAGGACGCGGGAGGTGTTT 61.474 55.000 12.47 0.00 40.09 2.83
926 927 1.262640 ATTAGGACGCGGGAGGTGTT 61.263 55.000 12.47 0.00 40.09 3.32
927 928 1.673808 GATTAGGACGCGGGAGGTGT 61.674 60.000 12.47 0.00 43.46 4.16
928 929 1.067582 GATTAGGACGCGGGAGGTG 59.932 63.158 12.47 0.00 0.00 4.00
929 930 0.974010 TTGATTAGGACGCGGGAGGT 60.974 55.000 12.47 0.00 0.00 3.85
930 931 0.529992 GTTGATTAGGACGCGGGAGG 60.530 60.000 12.47 0.00 0.00 4.30
931 932 0.529992 GGTTGATTAGGACGCGGGAG 60.530 60.000 12.47 0.00 0.00 4.30
932 933 1.518774 GGTTGATTAGGACGCGGGA 59.481 57.895 12.47 0.00 0.00 5.14
933 934 1.881252 CGGTTGATTAGGACGCGGG 60.881 63.158 12.47 0.00 0.00 6.13
934 935 1.881252 CCGGTTGATTAGGACGCGG 60.881 63.158 12.47 0.00 0.00 6.46
935 936 1.881252 CCCGGTTGATTAGGACGCG 60.881 63.158 3.53 3.53 0.00 6.01
936 937 0.808847 GACCCGGTTGATTAGGACGC 60.809 60.000 0.00 0.00 0.00 5.19
937 938 0.179092 GGACCCGGTTGATTAGGACG 60.179 60.000 0.00 0.00 0.00 4.79
938 939 1.201424 AGGACCCGGTTGATTAGGAC 58.799 55.000 0.00 0.00 0.00 3.85
939 940 1.835531 GAAGGACCCGGTTGATTAGGA 59.164 52.381 0.00 0.00 0.00 2.94
940 941 1.557832 TGAAGGACCCGGTTGATTAGG 59.442 52.381 0.00 0.00 0.00 2.69
941 942 3.007635 GTTGAAGGACCCGGTTGATTAG 58.992 50.000 0.00 0.00 0.00 1.73
942 943 2.613474 CGTTGAAGGACCCGGTTGATTA 60.613 50.000 0.00 0.00 0.00 1.75
943 944 1.880646 CGTTGAAGGACCCGGTTGATT 60.881 52.381 0.00 0.00 0.00 2.57
944 945 0.321298 CGTTGAAGGACCCGGTTGAT 60.321 55.000 0.00 0.00 0.00 2.57
945 946 1.070105 CGTTGAAGGACCCGGTTGA 59.930 57.895 0.00 0.00 0.00 3.18
946 947 2.613506 GCGTTGAAGGACCCGGTTG 61.614 63.158 0.00 0.00 0.00 3.77
974 975 2.653448 CGAGATCAGAGCGCACCG 60.653 66.667 11.47 0.00 0.00 4.94
1339 1352 1.067250 GGATCCTGCTCTGCTCGAC 59.933 63.158 3.84 0.00 0.00 4.20
1554 1567 2.167219 AATCTCGGCGTCGCACATG 61.167 57.895 20.50 5.62 36.13 3.21
1626 1639 2.342279 CTCCTCACGTCGGCCAAA 59.658 61.111 2.24 0.00 0.00 3.28
1825 1838 1.070289 GTCCTTGTTGTCGGAAGAGGT 59.930 52.381 0.00 0.00 43.49 3.85
1839 1855 1.446272 GCTCTCGGGTTCGTCCTTG 60.446 63.158 0.00 0.00 37.69 3.61
1856 1872 2.951745 CATCTCCGTCGTCTGCGC 60.952 66.667 0.00 0.00 38.14 6.09
1858 1874 0.798771 GTGTCATCTCCGTCGTCTGC 60.799 60.000 0.00 0.00 0.00 4.26
1866 1882 3.822192 TCGGCCGTGTCATCTCCG 61.822 66.667 27.15 0.00 41.30 4.63
1868 1884 2.579787 CGTCGGCCGTGTCATCTC 60.580 66.667 27.15 5.76 0.00 2.75
1869 1885 4.796231 GCGTCGGCCGTGTCATCT 62.796 66.667 27.15 0.00 39.32 2.90
1892 1911 2.512355 GCCTCCGATCCTTCCTCCC 61.512 68.421 0.00 0.00 0.00 4.30
1942 1961 4.486503 CCTCTGCTCTGGCCCTGC 62.487 72.222 0.00 1.97 37.74 4.85
1944 1963 1.994507 CTTCCTCTGCTCTGGCCCT 60.995 63.158 0.00 0.00 37.74 5.19
2040 2059 0.541863 CCTTGACTATCTTGGGCGGT 59.458 55.000 0.00 0.00 0.00 5.68
2052 2071 1.692519 ACGAACTTGTAGCCCTTGACT 59.307 47.619 0.00 0.00 0.00 3.41
2074 2093 2.642254 CGAGGTCGGGGTAGTGCAA 61.642 63.158 0.00 0.00 35.37 4.08
2283 2302 4.041723 GCTTGTAAAAGAAGCGCTTGAAA 58.958 39.130 30.47 9.58 36.74 2.69
2320 2339 7.959651 GCATCAGTAGATCAGTAAACAAACAAG 59.040 37.037 0.00 0.00 30.20 3.16
2321 2340 7.661437 AGCATCAGTAGATCAGTAAACAAACAA 59.339 33.333 0.00 0.00 30.20 2.83
2322 2341 7.161404 AGCATCAGTAGATCAGTAAACAAACA 58.839 34.615 0.00 0.00 30.20 2.83
2323 2342 7.201565 GGAGCATCAGTAGATCAGTAAACAAAC 60.202 40.741 0.00 0.00 36.25 2.93
2326 2345 5.422012 TGGAGCATCAGTAGATCAGTAAACA 59.578 40.000 0.00 0.00 36.25 2.83
2336 2355 3.053320 TCTTCTCCTGGAGCATCAGTAGA 60.053 47.826 19.08 9.05 36.25 2.59
2337 2356 3.295093 TCTTCTCCTGGAGCATCAGTAG 58.705 50.000 19.08 7.11 36.25 2.57
2339 2358 2.109774 CTCTTCTCCTGGAGCATCAGT 58.890 52.381 19.08 0.00 36.25 3.41
2340 2359 2.386779 TCTCTTCTCCTGGAGCATCAG 58.613 52.381 19.08 11.35 36.25 2.90
2342 2361 3.894427 TGTATCTCTTCTCCTGGAGCATC 59.106 47.826 19.08 4.20 0.00 3.91
2347 2366 3.757947 TGGTGTATCTCTTCTCCTGGA 57.242 47.619 0.00 0.00 0.00 3.86
2391 2410 8.851145 ACGTCTATCTGTTCATCTATATGTGTT 58.149 33.333 0.00 0.00 34.50 3.32
2392 2411 8.397575 ACGTCTATCTGTTCATCTATATGTGT 57.602 34.615 0.00 0.00 34.50 3.72
2393 2412 9.122613 CAACGTCTATCTGTTCATCTATATGTG 57.877 37.037 0.00 0.00 34.50 3.21
2394 2413 9.067986 TCAACGTCTATCTGTTCATCTATATGT 57.932 33.333 0.00 0.00 34.50 2.29
2395 2414 9.899226 TTCAACGTCTATCTGTTCATCTATATG 57.101 33.333 0.00 0.00 0.00 1.78
2398 2417 9.823647 AAATTCAACGTCTATCTGTTCATCTAT 57.176 29.630 0.00 0.00 0.00 1.98
2399 2418 9.653287 AAAATTCAACGTCTATCTGTTCATCTA 57.347 29.630 0.00 0.00 0.00 1.98
2400 2419 8.553459 AAAATTCAACGTCTATCTGTTCATCT 57.447 30.769 0.00 0.00 0.00 2.90
2403 2422 9.214957 ACATAAAATTCAACGTCTATCTGTTCA 57.785 29.630 0.00 0.00 0.00 3.18
2415 2440 9.003112 CAGAGCAGATTAACATAAAATTCAACG 57.997 33.333 0.00 0.00 0.00 4.10
2421 2446 9.525409 GCAATTCAGAGCAGATTAACATAAAAT 57.475 29.630 0.00 0.00 0.00 1.82
2424 2449 7.628769 TGCAATTCAGAGCAGATTAACATAA 57.371 32.000 0.00 0.00 35.51 1.90
2525 2551 2.618709 AGAGAAAAACTGAACCAAGCGG 59.381 45.455 0.00 0.00 38.77 5.52
2531 2557 3.203716 ACACGGAGAGAAAAACTGAACC 58.796 45.455 0.00 0.00 0.00 3.62
2545 2571 1.528586 CAACAGAGAAGCAACACGGAG 59.471 52.381 0.00 0.00 0.00 4.63
2549 2576 1.672881 ACAGCAACAGAGAAGCAACAC 59.327 47.619 0.00 0.00 0.00 3.32
2729 2756 7.123547 TCCGTAATTAATTGGGCAATTCTCTTT 59.876 33.333 11.05 0.00 40.99 2.52
2996 3027 0.874175 GCCTCGGTTTGTTTGTTGCC 60.874 55.000 0.00 0.00 0.00 4.52
3139 3170 3.458163 GAGCGGTGGATGTCGGGA 61.458 66.667 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.