Multiple sequence alignment - TraesCS2B01G426500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G426500 chr2B 100.000 1388 0 0 1 1388 613038665 613037278 0.000000e+00 2564
1 TraesCS2B01G426500 chr2B 100.000 1280 0 0 1776 3055 613036890 613035611 0.000000e+00 2364
2 TraesCS2B01G426500 chr2D 87.586 1458 88 41 1 1386 520584576 520583140 0.000000e+00 1604
3 TraesCS2B01G426500 chr2D 88.301 718 43 23 1776 2478 520583115 520582424 0.000000e+00 822
4 TraesCS2B01G426500 chr2A 89.796 1225 85 17 65 1258 665845252 665844037 0.000000e+00 1533
5 TraesCS2B01G426500 chr2A 88.596 912 62 21 434 1338 665991739 665990863 0.000000e+00 1070
6 TraesCS2B01G426500 chr2A 89.365 630 39 13 1776 2385 665990424 665989803 0.000000e+00 767
7 TraesCS2B01G426500 chr2A 87.676 641 38 22 1776 2385 665843408 665842778 0.000000e+00 708
8 TraesCS2B01G426500 chr2A 96.721 61 2 0 372 432 665991826 665991766 5.390000e-18 102
9 TraesCS2B01G426500 chr6B 91.724 435 31 5 956 1388 171972072 171971641 1.570000e-167 599
10 TraesCS2B01G426500 chr6B 89.849 463 41 6 926 1386 149055112 149055570 9.430000e-165 590
11 TraesCS2B01G426500 chr6B 86.327 490 45 16 1776 2251 171805194 171804713 5.840000e-142 514
12 TraesCS2B01G426500 chr6B 85.918 490 47 15 1776 2251 171768459 171767978 1.260000e-138 503
13 TraesCS2B01G426500 chr6B 93.729 303 19 0 1776 2078 149055595 149055897 3.590000e-124 455
14 TraesCS2B01G426500 chr6B 84.539 401 38 14 11 411 171973059 171972683 2.880000e-100 375
15 TraesCS2B01G426500 chr6B 81.776 214 23 12 11 219 149054298 149054500 6.780000e-37 165
16 TraesCS2B01G426500 chr6D 89.670 455 46 1 932 1386 75372246 75372699 2.040000e-161 579
17 TraesCS2B01G426500 chr6D 88.863 422 34 10 1776 2184 89355601 89355180 9.770000e-140 507
18 TraesCS2B01G426500 chr6D 85.146 478 48 16 1776 2239 89365669 89365201 4.610000e-128 468
19 TraesCS2B01G426500 chr6D 83.178 214 22 10 11 219 75371285 75371489 1.870000e-42 183
20 TraesCS2B01G426500 chr6A 89.778 450 37 9 943 1388 107692778 107692334 4.420000e-158 568
21 TraesCS2B01G426500 chr6A 89.310 449 37 11 943 1386 107701297 107700855 1.240000e-153 553
22 TraesCS2B01G426500 chr6A 89.327 431 44 2 926 1356 91423639 91424067 9.640000e-150 540
23 TraesCS2B01G426500 chr6A 89.573 422 28 12 1776 2184 107701058 107700640 3.490000e-144 521


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G426500 chr2B 613035611 613038665 3054 True 2464.000000 2564 100.000000 1 3055 2 chr2B.!!$R1 3054
1 TraesCS2B01G426500 chr2D 520582424 520584576 2152 True 1213.000000 1604 87.943500 1 2478 2 chr2D.!!$R1 2477
2 TraesCS2B01G426500 chr2A 665842778 665845252 2474 True 1120.500000 1533 88.736000 65 2385 2 chr2A.!!$R1 2320
3 TraesCS2B01G426500 chr2A 665989803 665991826 2023 True 646.333333 1070 91.560667 372 2385 3 chr2A.!!$R2 2013
4 TraesCS2B01G426500 chr6B 171971641 171973059 1418 True 487.000000 599 88.131500 11 1388 2 chr6B.!!$R3 1377
5 TraesCS2B01G426500 chr6B 149054298 149055897 1599 False 403.333333 590 88.451333 11 2078 3 chr6B.!!$F1 2067
6 TraesCS2B01G426500 chr6D 75371285 75372699 1414 False 381.000000 579 86.424000 11 1386 2 chr6D.!!$F1 1375
7 TraesCS2B01G426500 chr6A 107700640 107701297 657 True 537.000000 553 89.441500 943 2184 2 chr6A.!!$R2 1241

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
95 96 0.835941 ATCCTCATCACAGCTCCCAC 59.164 55.0 0.00 0.0 0.0 4.61 F
1242 2911 1.216122 GAGGCATGCAGATCTTCGTC 58.784 55.0 21.36 0.0 0.0 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1302 2971 0.329261 CCTGGATCTTGGCCTTGACA 59.671 55.0 3.32 0.0 0.0 3.58 R
2391 4100 0.179100 GCAGCAGCGATCTAGTTCCA 60.179 55.0 0.00 0.0 0.0 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.900716 GGATTCCTTCTCCTTCTCCG 57.099 55.000 0.00 0.00 0.00 4.63
55 56 3.192633 CCAGCCGGCATAAATAAATACCC 59.807 47.826 31.54 0.00 0.00 3.69
62 63 4.450117 GGCATAAATAAATACCCACCCCCT 60.450 45.833 0.00 0.00 0.00 4.79
83 84 1.011293 TCCCCTCCTTCCAATCCTCAT 59.989 52.381 0.00 0.00 0.00 2.90
95 96 0.835941 ATCCTCATCACAGCTCCCAC 59.164 55.000 0.00 0.00 0.00 4.61
241 275 3.689649 GCGTTGATTAGATGGTTGGAGTT 59.310 43.478 0.00 0.00 0.00 3.01
247 281 7.252612 TGATTAGATGGTTGGAGTTTGTAGA 57.747 36.000 0.00 0.00 0.00 2.59
274 309 2.412847 GGAATTTCGTCGGTTTCTGCTG 60.413 50.000 0.00 0.00 0.00 4.41
284 319 2.799562 CGGTTTCTGCTGCGATCTGATA 60.800 50.000 0.00 0.00 0.00 2.15
287 322 3.808466 TTCTGCTGCGATCTGATACTT 57.192 42.857 0.00 0.00 0.00 2.24
300 335 4.430007 TCTGATACTTTGGGAACGATTCG 58.570 43.478 4.14 4.14 0.00 3.34
365 400 7.182060 TCTGGCTAATTCTTAGGGATTTTTGT 58.818 34.615 0.00 0.00 33.80 2.83
524 676 1.521010 CCTGATCTGCAGCTCGTGG 60.521 63.158 9.47 11.57 43.50 4.94
660 881 8.223330 AGCTATGTGGAATCCTTGAGATAATTT 58.777 33.333 0.00 0.00 33.66 1.82
675 937 7.909267 TGAGATAATTTATCTTCTTGCACGTG 58.091 34.615 17.79 12.28 45.16 4.49
716 983 8.510243 TCTTCAATGAAGAAAATATGCTGCTA 57.490 30.769 22.00 0.00 44.37 3.49
795 1078 6.255887 GCTAAATTATGTCTGACAGCTACGTT 59.744 38.462 16.46 7.78 0.00 3.99
797 1080 2.370281 ATGTCTGACAGCTACGTTGG 57.630 50.000 16.46 0.00 0.00 3.77
848 1152 2.014128 GCATGCACCTACCGTATGTTT 58.986 47.619 14.21 0.00 0.00 2.83
849 1153 2.422127 GCATGCACCTACCGTATGTTTT 59.578 45.455 14.21 0.00 0.00 2.43
965 1336 2.346766 TGCTTGGTCTGCTTCTTGAA 57.653 45.000 0.00 0.00 0.00 2.69
1242 2911 1.216122 GAGGCATGCAGATCTTCGTC 58.784 55.000 21.36 0.00 0.00 4.20
1269 2938 2.047274 ACCGGCAAGACCATCACG 60.047 61.111 0.00 0.00 39.03 4.35
1302 2971 3.525537 GTCATCTGACACCATCGACAAT 58.474 45.455 5.46 0.00 44.18 2.71
1335 3004 1.225704 CCAGGACAAGGAGGGCATC 59.774 63.158 0.00 0.00 0.00 3.91
1386 3055 1.302285 CAAGCAGCTGGAGGATGGT 59.698 57.895 17.12 0.00 44.28 3.55
1903 3572 2.224523 ACACCATCGACAATGTCAAGGT 60.225 45.455 14.24 13.74 33.21 3.50
1988 3657 4.554036 GAGGATGGCCGCACCCTC 62.554 72.222 14.17 14.17 39.96 4.30
2106 3775 3.400590 GTCGTCCGTTGTGTCCGC 61.401 66.667 0.00 0.00 0.00 5.54
2117 3795 1.960417 TGTGTCCGCTCATTTGAACA 58.040 45.000 0.00 0.00 0.00 3.18
2160 3841 7.827729 AGTCCTATGTTGGGTTTAATGAACTAC 59.172 37.037 0.00 0.00 38.35 2.73
2164 3847 5.374921 TGTTGGGTTTAATGAACTACCGAA 58.625 37.500 0.00 0.00 38.35 4.30
2185 3869 4.545823 ATCACTGTTACGTGTTGGTTTG 57.454 40.909 0.00 0.00 36.33 2.93
2190 3874 2.161012 TGTTACGTGTTGGTTTGCGAAA 59.839 40.909 0.00 0.00 0.00 3.46
2196 3880 3.376540 GTGTTGGTTTGCGAAATTGCTA 58.623 40.909 0.00 0.00 35.36 3.49
2218 3902 7.426929 CTAGTACAGCAGTTTCATTTCAAGT 57.573 36.000 0.00 0.00 0.00 3.16
2219 3903 8.534333 CTAGTACAGCAGTTTCATTTCAAGTA 57.466 34.615 0.00 0.00 0.00 2.24
2220 3904 7.190920 AGTACAGCAGTTTCATTTCAAGTAC 57.809 36.000 0.00 0.00 0.00 2.73
2289 3989 5.683681 TGCTTGGCAATGATCTTACTCATA 58.316 37.500 0.00 0.00 34.79 2.15
2325 4033 1.983605 CGCTTGAATTGCTTGCTTGAG 59.016 47.619 0.00 0.00 0.00 3.02
2373 4082 5.507315 GGTGATGCAATTTATCCCTAAACCG 60.507 44.000 0.00 0.00 29.85 4.44
2375 4084 4.237976 TGCAATTTATCCCTAAACCGGA 57.762 40.909 9.46 0.00 29.85 5.14
2376 4085 4.798882 TGCAATTTATCCCTAAACCGGAT 58.201 39.130 9.46 0.00 42.84 4.18
2377 4086 4.582656 TGCAATTTATCCCTAAACCGGATG 59.417 41.667 9.46 0.00 40.44 3.51
2378 4087 4.558697 GCAATTTATCCCTAAACCGGATGC 60.559 45.833 9.46 0.00 40.44 3.91
2380 4089 5.836024 ATTTATCCCTAAACCGGATGCTA 57.164 39.130 9.46 0.00 40.44 3.49
2381 4090 4.612264 TTATCCCTAAACCGGATGCTAC 57.388 45.455 9.46 0.00 40.44 3.58
2384 4093 1.583054 CCTAAACCGGATGCTACTGC 58.417 55.000 9.46 0.00 40.20 4.40
2385 4094 1.139058 CCTAAACCGGATGCTACTGCT 59.861 52.381 9.46 0.00 40.48 4.24
2386 4095 2.205074 CTAAACCGGATGCTACTGCTG 58.795 52.381 9.46 0.00 40.48 4.41
2387 4096 1.026718 AAACCGGATGCTACTGCTGC 61.027 55.000 9.46 0.00 40.48 5.25
2388 4097 2.590007 CCGGATGCTACTGCTGCC 60.590 66.667 0.00 0.00 40.48 4.85
2389 4098 2.503061 CGGATGCTACTGCTGCCT 59.497 61.111 0.00 0.00 40.48 4.75
2390 4099 1.593750 CGGATGCTACTGCTGCCTC 60.594 63.158 0.00 0.00 40.48 4.70
2391 4100 1.828768 GGATGCTACTGCTGCCTCT 59.171 57.895 0.00 0.00 40.48 3.69
2392 4101 0.532417 GGATGCTACTGCTGCCTCTG 60.532 60.000 0.00 0.00 40.48 3.35
2393 4102 0.532417 GATGCTACTGCTGCCTCTGG 60.532 60.000 0.00 0.00 40.48 3.86
2394 4103 0.979709 ATGCTACTGCTGCCTCTGGA 60.980 55.000 0.00 0.00 40.48 3.86
2395 4104 1.194121 TGCTACTGCTGCCTCTGGAA 61.194 55.000 0.00 0.00 40.48 3.53
2396 4105 0.742635 GCTACTGCTGCCTCTGGAAC 60.743 60.000 0.00 0.00 36.03 3.62
2397 4106 0.901124 CTACTGCTGCCTCTGGAACT 59.099 55.000 0.00 0.00 0.00 3.01
2398 4107 2.103373 CTACTGCTGCCTCTGGAACTA 58.897 52.381 0.00 0.00 0.00 2.24
2403 4112 1.269517 GCTGCCTCTGGAACTAGATCG 60.270 57.143 0.00 0.00 0.00 3.69
2431 4140 4.800993 TGCGTTAATTGTGTGACCTTTTTG 59.199 37.500 0.00 0.00 0.00 2.44
2437 4146 3.567576 TGTGTGACCTTTTTGTGTGTG 57.432 42.857 0.00 0.00 0.00 3.82
2448 4157 6.593770 ACCTTTTTGTGTGTGAAAAATTCTCC 59.406 34.615 0.00 0.00 33.10 3.71
2449 4158 6.037062 CCTTTTTGTGTGTGAAAAATTCTCCC 59.963 38.462 0.00 0.00 33.10 4.30
2450 4159 5.667539 TTTGTGTGTGAAAAATTCTCCCA 57.332 34.783 0.00 0.00 0.00 4.37
2451 4160 5.667539 TTGTGTGTGAAAAATTCTCCCAA 57.332 34.783 0.00 0.00 0.00 4.12
2469 4183 1.987770 CAATTTTTGCAGCGTGGCTAG 59.012 47.619 2.31 0.00 36.40 3.42
2470 4184 1.247567 ATTTTTGCAGCGTGGCTAGT 58.752 45.000 2.31 0.00 36.40 2.57
2478 4192 3.118920 TGCAGCGTGGCTAGTATTTCTTA 60.119 43.478 2.31 0.00 36.40 2.10
2479 4193 3.869246 GCAGCGTGGCTAGTATTTCTTAA 59.131 43.478 0.00 0.00 36.40 1.85
2480 4194 4.331717 GCAGCGTGGCTAGTATTTCTTAAA 59.668 41.667 0.00 0.00 36.40 1.52
2481 4195 5.163794 GCAGCGTGGCTAGTATTTCTTAAAA 60.164 40.000 0.00 0.00 36.40 1.52
2482 4196 6.248631 CAGCGTGGCTAGTATTTCTTAAAAC 58.751 40.000 0.00 0.00 36.40 2.43
2483 4197 6.092259 CAGCGTGGCTAGTATTTCTTAAAACT 59.908 38.462 0.00 0.00 36.40 2.66
2484 4198 6.653740 AGCGTGGCTAGTATTTCTTAAAACTT 59.346 34.615 0.00 0.00 36.99 2.66
2485 4199 7.174426 AGCGTGGCTAGTATTTCTTAAAACTTT 59.826 33.333 0.00 0.00 36.99 2.66
2486 4200 7.806487 GCGTGGCTAGTATTTCTTAAAACTTTT 59.194 33.333 0.00 0.00 0.00 2.27
2487 4201 9.113876 CGTGGCTAGTATTTCTTAAAACTTTTG 57.886 33.333 0.00 0.00 0.00 2.44
2490 4204 9.326339 GGCTAGTATTTCTTAAAACTTTTGACG 57.674 33.333 0.00 0.00 0.00 4.35
2491 4205 9.874215 GCTAGTATTTCTTAAAACTTTTGACGT 57.126 29.630 0.00 0.00 0.00 4.34
2496 4210 7.481768 TTTCTTAAAACTTTTGACGTGTTCG 57.518 32.000 0.00 0.00 43.34 3.95
2497 4211 6.406093 TCTTAAAACTTTTGACGTGTTCGA 57.594 33.333 0.00 0.00 40.62 3.71
2498 4212 6.471839 TCTTAAAACTTTTGACGTGTTCGAG 58.528 36.000 0.00 0.00 40.62 4.04
2499 4213 4.932268 AAAACTTTTGACGTGTTCGAGA 57.068 36.364 0.00 0.00 40.62 4.04
2500 4214 5.479716 AAAACTTTTGACGTGTTCGAGAT 57.520 34.783 0.00 0.00 40.62 2.75
2501 4215 5.479716 AAACTTTTGACGTGTTCGAGATT 57.520 34.783 0.00 0.00 40.62 2.40
2502 4216 6.592798 AAACTTTTGACGTGTTCGAGATTA 57.407 33.333 0.00 0.00 40.62 1.75
2503 4217 6.592798 AACTTTTGACGTGTTCGAGATTAA 57.407 33.333 0.00 0.00 40.62 1.40
2504 4218 6.780706 ACTTTTGACGTGTTCGAGATTAAT 57.219 33.333 0.00 0.00 40.62 1.40
2505 4219 7.186021 ACTTTTGACGTGTTCGAGATTAATT 57.814 32.000 0.00 0.00 40.62 1.40
2506 4220 7.288672 ACTTTTGACGTGTTCGAGATTAATTC 58.711 34.615 0.00 0.00 40.62 2.17
2507 4221 6.772770 TTTGACGTGTTCGAGATTAATTCA 57.227 33.333 0.00 0.00 40.62 2.57
2508 4222 6.772770 TTGACGTGTTCGAGATTAATTCAA 57.227 33.333 0.00 0.00 40.62 2.69
2509 4223 6.772770 TGACGTGTTCGAGATTAATTCAAA 57.227 33.333 0.00 0.00 40.62 2.69
2510 4224 7.179927 TGACGTGTTCGAGATTAATTCAAAA 57.820 32.000 0.00 0.00 40.62 2.44
2511 4225 7.802738 TGACGTGTTCGAGATTAATTCAAAAT 58.197 30.769 0.00 0.00 40.62 1.82
2512 4226 7.955324 TGACGTGTTCGAGATTAATTCAAAATC 59.045 33.333 0.00 0.00 40.62 2.17
2513 4227 7.241376 ACGTGTTCGAGATTAATTCAAAATCC 58.759 34.615 0.00 0.00 40.62 3.01
2514 4228 6.408039 CGTGTTCGAGATTAATTCAAAATCCG 59.592 38.462 0.00 1.74 39.71 4.18
2515 4229 7.461107 GTGTTCGAGATTAATTCAAAATCCGA 58.539 34.615 0.00 8.00 35.84 4.55
2516 4230 7.960738 GTGTTCGAGATTAATTCAAAATCCGAA 59.039 33.333 14.75 14.75 40.08 4.30
2517 4231 8.311894 GTTCGAGATTAATTCAAAATCCGAAC 57.688 34.615 22.70 22.70 45.70 3.95
2518 4232 7.603963 TCGAGATTAATTCAAAATCCGAACA 57.396 32.000 8.97 0.00 35.29 3.18
2519 4233 8.208718 TCGAGATTAATTCAAAATCCGAACAT 57.791 30.769 8.97 0.00 35.29 2.71
2520 4234 8.122330 TCGAGATTAATTCAAAATCCGAACATG 58.878 33.333 0.00 0.00 35.29 3.21
2521 4235 7.910162 CGAGATTAATTCAAAATCCGAACATGT 59.090 33.333 0.00 0.00 34.50 3.21
2522 4236 9.573133 GAGATTAATTCAAAATCCGAACATGTT 57.427 29.630 11.78 11.78 34.50 2.71
2528 4242 7.731882 TTCAAAATCCGAACATGTTACTACA 57.268 32.000 11.95 0.00 38.95 2.74
2529 4243 7.915293 TCAAAATCCGAACATGTTACTACAT 57.085 32.000 11.95 0.00 45.81 2.29
2530 4244 7.970384 TCAAAATCCGAACATGTTACTACATC 58.030 34.615 11.95 0.00 43.07 3.06
2531 4245 6.583912 AAATCCGAACATGTTACTACATCG 57.416 37.500 11.95 8.94 43.07 3.84
2533 4247 3.444742 TCCGAACATGTTACTACATCGGT 59.555 43.478 24.56 0.00 46.80 4.69
2534 4248 4.082081 TCCGAACATGTTACTACATCGGTT 60.082 41.667 24.56 6.31 46.80 4.44
2535 4249 4.032445 CCGAACATGTTACTACATCGGTTG 59.968 45.833 19.88 0.96 44.03 3.77
2536 4250 4.032445 CGAACATGTTACTACATCGGTTGG 59.968 45.833 11.95 0.00 43.07 3.77
2537 4251 4.811969 ACATGTTACTACATCGGTTGGA 57.188 40.909 0.00 0.00 43.07 3.53
2538 4252 4.501071 ACATGTTACTACATCGGTTGGAC 58.499 43.478 0.00 0.00 43.07 4.02
2539 4253 4.020928 ACATGTTACTACATCGGTTGGACA 60.021 41.667 0.00 0.00 43.07 4.02
2540 4254 4.811969 TGTTACTACATCGGTTGGACAT 57.188 40.909 0.00 0.00 0.00 3.06
2541 4255 4.500127 TGTTACTACATCGGTTGGACATG 58.500 43.478 0.00 0.00 0.00 3.21
2542 4256 4.020928 TGTTACTACATCGGTTGGACATGT 60.021 41.667 0.00 0.00 35.00 3.21
2543 4257 2.972625 ACTACATCGGTTGGACATGTG 58.027 47.619 1.15 0.00 32.88 3.21
2544 4258 1.665679 CTACATCGGTTGGACATGTGC 59.334 52.381 10.90 10.90 32.88 4.57
2545 4259 1.298157 ACATCGGTTGGACATGTGCG 61.298 55.000 13.03 0.00 29.36 5.34
2546 4260 1.745115 ATCGGTTGGACATGTGCGG 60.745 57.895 13.03 2.31 0.00 5.69
2547 4261 4.101790 CGGTTGGACATGTGCGGC 62.102 66.667 13.03 7.57 0.00 6.53
2548 4262 2.672996 GGTTGGACATGTGCGGCT 60.673 61.111 13.03 0.00 0.00 5.52
2549 4263 2.690778 GGTTGGACATGTGCGGCTC 61.691 63.158 13.03 0.00 0.00 4.70
2550 4264 1.672356 GTTGGACATGTGCGGCTCT 60.672 57.895 13.03 0.00 0.00 4.09
2551 4265 1.073025 TTGGACATGTGCGGCTCTT 59.927 52.632 13.03 0.00 0.00 2.85
2552 4266 0.537143 TTGGACATGTGCGGCTCTTT 60.537 50.000 13.03 0.00 0.00 2.52
2553 4267 0.955428 TGGACATGTGCGGCTCTTTC 60.955 55.000 13.03 0.00 0.00 2.62
2554 4268 1.421485 GACATGTGCGGCTCTTTCG 59.579 57.895 1.15 0.00 0.00 3.46
2555 4269 1.970917 GACATGTGCGGCTCTTTCGG 61.971 60.000 1.15 0.00 0.00 4.30
2556 4270 2.436646 ATGTGCGGCTCTTTCGGG 60.437 61.111 0.00 0.00 0.00 5.14
2559 4273 4.408821 TGCGGCTCTTTCGGGCAT 62.409 61.111 0.00 0.00 0.00 4.40
2560 4274 3.577313 GCGGCTCTTTCGGGCATC 61.577 66.667 0.00 0.00 0.00 3.91
2561 4275 2.187946 CGGCTCTTTCGGGCATCT 59.812 61.111 0.00 0.00 0.00 2.90
2562 4276 1.450312 CGGCTCTTTCGGGCATCTT 60.450 57.895 0.00 0.00 0.00 2.40
2563 4277 1.709147 CGGCTCTTTCGGGCATCTTG 61.709 60.000 0.00 0.00 0.00 3.02
2564 4278 1.379642 GGCTCTTTCGGGCATCTTGG 61.380 60.000 0.00 0.00 0.00 3.61
2565 4279 0.392998 GCTCTTTCGGGCATCTTGGA 60.393 55.000 0.00 0.00 0.00 3.53
2566 4280 1.748591 GCTCTTTCGGGCATCTTGGAT 60.749 52.381 0.00 0.00 0.00 3.41
2567 4281 2.485479 GCTCTTTCGGGCATCTTGGATA 60.485 50.000 0.00 0.00 0.00 2.59
2568 4282 3.808728 CTCTTTCGGGCATCTTGGATAA 58.191 45.455 0.00 0.00 0.00 1.75
2569 4283 4.392940 CTCTTTCGGGCATCTTGGATAAT 58.607 43.478 0.00 0.00 0.00 1.28
2570 4284 5.551233 CTCTTTCGGGCATCTTGGATAATA 58.449 41.667 0.00 0.00 0.00 0.98
2571 4285 5.305585 TCTTTCGGGCATCTTGGATAATAC 58.694 41.667 0.00 0.00 0.00 1.89
2572 4286 4.974645 TTCGGGCATCTTGGATAATACT 57.025 40.909 0.00 0.00 0.00 2.12
2573 4287 6.269077 TCTTTCGGGCATCTTGGATAATACTA 59.731 38.462 0.00 0.00 0.00 1.82
2574 4288 5.401531 TCGGGCATCTTGGATAATACTAC 57.598 43.478 0.00 0.00 0.00 2.73
2575 4289 5.084519 TCGGGCATCTTGGATAATACTACT 58.915 41.667 0.00 0.00 0.00 2.57
2576 4290 6.250711 TCGGGCATCTTGGATAATACTACTA 58.749 40.000 0.00 0.00 0.00 1.82
2577 4291 6.722590 TCGGGCATCTTGGATAATACTACTAA 59.277 38.462 0.00 0.00 0.00 2.24
2578 4292 7.233962 TCGGGCATCTTGGATAATACTACTAAA 59.766 37.037 0.00 0.00 0.00 1.85
2579 4293 7.331193 CGGGCATCTTGGATAATACTACTAAAC 59.669 40.741 0.00 0.00 0.00 2.01
2580 4294 8.154856 GGGCATCTTGGATAATACTACTAAACA 58.845 37.037 0.00 0.00 0.00 2.83
2581 4295 9.555727 GGCATCTTGGATAATACTACTAAACAA 57.444 33.333 0.00 0.00 0.00 2.83
2585 4299 9.609346 TCTTGGATAATACTACTAAACAAAGGC 57.391 33.333 0.00 0.00 0.00 4.35
2586 4300 8.741603 TTGGATAATACTACTAAACAAAGGCC 57.258 34.615 0.00 0.00 0.00 5.19
2587 4301 6.987992 TGGATAATACTACTAAACAAAGGCCG 59.012 38.462 0.00 0.00 0.00 6.13
2588 4302 6.073385 GGATAATACTACTAAACAAAGGCCGC 60.073 42.308 0.00 0.00 0.00 6.53
2589 4303 2.853235 ACTACTAAACAAAGGCCGCT 57.147 45.000 0.00 0.00 0.00 5.52
2590 4304 3.967332 ACTACTAAACAAAGGCCGCTA 57.033 42.857 0.00 0.00 0.00 4.26
2591 4305 3.593096 ACTACTAAACAAAGGCCGCTAC 58.407 45.455 0.00 0.00 0.00 3.58
2592 4306 1.817357 ACTAAACAAAGGCCGCTACC 58.183 50.000 0.00 0.00 0.00 3.18
2593 4307 1.092348 CTAAACAAAGGCCGCTACCC 58.908 55.000 0.00 0.00 0.00 3.69
2594 4308 0.694196 TAAACAAAGGCCGCTACCCT 59.306 50.000 0.00 0.00 0.00 4.34
2595 4309 0.694196 AAACAAAGGCCGCTACCCTA 59.306 50.000 0.00 0.00 30.93 3.53
2596 4310 0.694196 AACAAAGGCCGCTACCCTAA 59.306 50.000 0.00 0.00 30.93 2.69
2597 4311 0.694196 ACAAAGGCCGCTACCCTAAA 59.306 50.000 0.00 0.00 30.93 1.85
2598 4312 1.074244 ACAAAGGCCGCTACCCTAAAA 59.926 47.619 0.00 0.00 30.93 1.52
2599 4313 2.291346 ACAAAGGCCGCTACCCTAAAAT 60.291 45.455 0.00 0.00 30.93 1.82
2600 4314 3.054213 ACAAAGGCCGCTACCCTAAAATA 60.054 43.478 0.00 0.00 30.93 1.40
2601 4315 3.937778 AAGGCCGCTACCCTAAAATAA 57.062 42.857 0.00 0.00 30.93 1.40
2602 4316 3.937778 AGGCCGCTACCCTAAAATAAA 57.062 42.857 0.00 0.00 0.00 1.40
2603 4317 3.548770 AGGCCGCTACCCTAAAATAAAC 58.451 45.455 0.00 0.00 0.00 2.01
2604 4318 3.201487 AGGCCGCTACCCTAAAATAAACT 59.799 43.478 0.00 0.00 0.00 2.66
2605 4319 3.314357 GGCCGCTACCCTAAAATAAACTG 59.686 47.826 0.00 0.00 0.00 3.16
2606 4320 3.314357 GCCGCTACCCTAAAATAAACTGG 59.686 47.826 0.00 0.00 0.00 4.00
2607 4321 4.773013 CCGCTACCCTAAAATAAACTGGA 58.227 43.478 0.00 0.00 0.00 3.86
2608 4322 5.187687 CCGCTACCCTAAAATAAACTGGAA 58.812 41.667 0.00 0.00 0.00 3.53
2609 4323 5.648960 CCGCTACCCTAAAATAAACTGGAAA 59.351 40.000 0.00 0.00 0.00 3.13
2610 4324 6.320418 CCGCTACCCTAAAATAAACTGGAAAT 59.680 38.462 0.00 0.00 0.00 2.17
2611 4325 7.147966 CCGCTACCCTAAAATAAACTGGAAATT 60.148 37.037 0.00 0.00 0.00 1.82
2612 4326 7.913821 CGCTACCCTAAAATAAACTGGAAATTC 59.086 37.037 0.00 0.00 0.00 2.17
2613 4327 8.967918 GCTACCCTAAAATAAACTGGAAATTCT 58.032 33.333 0.00 0.00 0.00 2.40
2649 4363 6.396829 AATAAATCATAGGCTTCAACTGGC 57.603 37.500 0.00 0.00 0.00 4.85
2650 4364 3.370840 AATCATAGGCTTCAACTGGCA 57.629 42.857 0.00 0.00 0.00 4.92
2651 4365 2.408271 TCATAGGCTTCAACTGGCAG 57.592 50.000 14.16 14.16 0.00 4.85
2652 4366 1.908619 TCATAGGCTTCAACTGGCAGA 59.091 47.619 23.66 0.00 0.00 4.26
2653 4367 2.305635 TCATAGGCTTCAACTGGCAGAA 59.694 45.455 23.66 4.33 0.00 3.02
2654 4368 3.054139 TCATAGGCTTCAACTGGCAGAAT 60.054 43.478 23.66 6.63 0.00 2.40
2655 4369 1.831580 AGGCTTCAACTGGCAGAATC 58.168 50.000 23.66 0.61 0.00 2.52
2656 4370 1.353694 AGGCTTCAACTGGCAGAATCT 59.646 47.619 23.66 5.57 0.00 2.40
2657 4371 2.573462 AGGCTTCAACTGGCAGAATCTA 59.427 45.455 23.66 1.30 0.00 1.98
2658 4372 3.201708 AGGCTTCAACTGGCAGAATCTAT 59.798 43.478 23.66 0.00 0.00 1.98
2659 4373 3.950395 GGCTTCAACTGGCAGAATCTATT 59.050 43.478 23.66 0.00 0.00 1.73
2660 4374 4.400567 GGCTTCAACTGGCAGAATCTATTT 59.599 41.667 23.66 0.00 0.00 1.40
2661 4375 5.105595 GGCTTCAACTGGCAGAATCTATTTT 60.106 40.000 23.66 0.00 0.00 1.82
2662 4376 6.032717 GCTTCAACTGGCAGAATCTATTTTC 58.967 40.000 23.66 0.00 0.00 2.29
2663 4377 6.349611 GCTTCAACTGGCAGAATCTATTTTCA 60.350 38.462 23.66 0.00 0.00 2.69
2664 4378 7.523293 TTCAACTGGCAGAATCTATTTTCAA 57.477 32.000 23.66 0.00 0.00 2.69
2665 4379 7.707624 TCAACTGGCAGAATCTATTTTCAAT 57.292 32.000 23.66 0.00 0.00 2.57
2666 4380 7.765307 TCAACTGGCAGAATCTATTTTCAATC 58.235 34.615 23.66 0.00 0.00 2.67
2667 4381 7.394077 TCAACTGGCAGAATCTATTTTCAATCA 59.606 33.333 23.66 0.00 0.00 2.57
2668 4382 7.707624 ACTGGCAGAATCTATTTTCAATCAA 57.292 32.000 23.66 0.00 0.00 2.57
2669 4383 8.125978 ACTGGCAGAATCTATTTTCAATCAAA 57.874 30.769 23.66 0.00 0.00 2.69
2670 4384 8.031277 ACTGGCAGAATCTATTTTCAATCAAAC 58.969 33.333 23.66 0.00 0.00 2.93
2671 4385 7.894708 TGGCAGAATCTATTTTCAATCAAACA 58.105 30.769 0.00 0.00 0.00 2.83
2672 4386 7.814107 TGGCAGAATCTATTTTCAATCAAACAC 59.186 33.333 0.00 0.00 0.00 3.32
2673 4387 7.814107 GGCAGAATCTATTTTCAATCAAACACA 59.186 33.333 0.00 0.00 0.00 3.72
2674 4388 9.195411 GCAGAATCTATTTTCAATCAAACACAA 57.805 29.630 0.00 0.00 0.00 3.33
2678 4392 9.480053 AATCTATTTTCAATCAAACACAACTGG 57.520 29.630 0.00 0.00 0.00 4.00
2679 4393 8.231692 TCTATTTTCAATCAAACACAACTGGA 57.768 30.769 0.00 0.00 0.00 3.86
2680 4394 8.352201 TCTATTTTCAATCAAACACAACTGGAG 58.648 33.333 0.00 0.00 0.00 3.86
2681 4395 5.913137 TTTCAATCAAACACAACTGGAGT 57.087 34.783 0.00 0.00 0.00 3.85
2682 4396 5.913137 TTCAATCAAACACAACTGGAGTT 57.087 34.783 0.00 0.00 39.12 3.01
2683 4397 5.913137 TCAATCAAACACAACTGGAGTTT 57.087 34.783 0.00 0.00 35.83 2.66
2684 4398 7.397892 TTCAATCAAACACAACTGGAGTTTA 57.602 32.000 0.00 0.00 35.83 2.01
2685 4399 7.397892 TCAATCAAACACAACTGGAGTTTAA 57.602 32.000 0.00 0.00 35.83 1.52
2686 4400 8.006298 TCAATCAAACACAACTGGAGTTTAAT 57.994 30.769 0.00 0.00 35.83 1.40
2687 4401 8.474025 TCAATCAAACACAACTGGAGTTTAATT 58.526 29.630 0.00 0.00 35.83 1.40
2688 4402 8.542132 CAATCAAACACAACTGGAGTTTAATTG 58.458 33.333 9.55 9.55 35.65 2.32
2689 4403 6.568869 TCAAACACAACTGGAGTTTAATTGG 58.431 36.000 0.00 0.00 35.83 3.16
2690 4404 5.529581 AACACAACTGGAGTTTAATTGGG 57.470 39.130 0.00 0.00 35.83 4.12
2691 4405 3.320826 ACACAACTGGAGTTTAATTGGGC 59.679 43.478 0.00 0.00 35.83 5.36
2692 4406 2.897326 ACAACTGGAGTTTAATTGGGCC 59.103 45.455 0.00 0.00 35.83 5.80
2693 4407 2.896685 CAACTGGAGTTTAATTGGGCCA 59.103 45.455 0.00 0.00 35.83 5.36
2694 4408 3.252554 ACTGGAGTTTAATTGGGCCAA 57.747 42.857 23.33 23.33 0.00 4.52
2695 4409 2.897326 ACTGGAGTTTAATTGGGCCAAC 59.103 45.455 23.59 9.43 0.00 3.77
2696 4410 2.896685 CTGGAGTTTAATTGGGCCAACA 59.103 45.455 23.59 9.94 0.00 3.33
2697 4411 3.309296 TGGAGTTTAATTGGGCCAACAA 58.691 40.909 23.59 15.83 34.41 2.83
2698 4412 3.711704 TGGAGTTTAATTGGGCCAACAAA 59.288 39.130 23.59 20.71 33.48 2.83
2699 4413 4.349342 TGGAGTTTAATTGGGCCAACAAAT 59.651 37.500 23.59 13.89 33.48 2.32
2700 4414 4.694982 GGAGTTTAATTGGGCCAACAAATG 59.305 41.667 23.59 0.00 33.48 2.32
2701 4415 5.512232 GGAGTTTAATTGGGCCAACAAATGA 60.512 40.000 23.59 0.00 33.48 2.57
2702 4416 5.934781 AGTTTAATTGGGCCAACAAATGAA 58.065 33.333 23.59 8.54 33.48 2.57
2703 4417 6.541907 AGTTTAATTGGGCCAACAAATGAAT 58.458 32.000 23.59 0.00 33.48 2.57
2704 4418 6.430616 AGTTTAATTGGGCCAACAAATGAATG 59.569 34.615 23.59 0.00 33.48 2.67
2705 4419 4.637387 AATTGGGCCAACAAATGAATGA 57.363 36.364 23.59 0.00 33.48 2.57
2706 4420 4.847990 ATTGGGCCAACAAATGAATGAT 57.152 36.364 23.59 0.00 33.48 2.45
2707 4421 5.954153 ATTGGGCCAACAAATGAATGATA 57.046 34.783 23.59 0.00 33.48 2.15
2708 4422 5.341872 TTGGGCCAACAAATGAATGATAG 57.658 39.130 16.66 0.00 0.00 2.08
2709 4423 3.705579 TGGGCCAACAAATGAATGATAGG 59.294 43.478 2.13 0.00 0.00 2.57
2710 4424 3.070015 GGGCCAACAAATGAATGATAGGG 59.930 47.826 4.39 0.00 0.00 3.53
2711 4425 3.070015 GGCCAACAAATGAATGATAGGGG 59.930 47.826 0.00 0.00 0.00 4.79
2712 4426 3.960102 GCCAACAAATGAATGATAGGGGA 59.040 43.478 0.00 0.00 0.00 4.81
2713 4427 4.038402 GCCAACAAATGAATGATAGGGGAG 59.962 45.833 0.00 0.00 0.00 4.30
2714 4428 4.586001 CCAACAAATGAATGATAGGGGAGG 59.414 45.833 0.00 0.00 0.00 4.30
2715 4429 3.837355 ACAAATGAATGATAGGGGAGGC 58.163 45.455 0.00 0.00 0.00 4.70
2716 4430 2.816087 CAAATGAATGATAGGGGAGGCG 59.184 50.000 0.00 0.00 0.00 5.52
2717 4431 1.734655 ATGAATGATAGGGGAGGCGT 58.265 50.000 0.00 0.00 0.00 5.68
2718 4432 1.507140 TGAATGATAGGGGAGGCGTT 58.493 50.000 0.00 0.00 0.00 4.84
2719 4433 1.843851 TGAATGATAGGGGAGGCGTTT 59.156 47.619 0.00 0.00 0.00 3.60
2720 4434 2.241176 TGAATGATAGGGGAGGCGTTTT 59.759 45.455 0.00 0.00 0.00 2.43
2721 4435 2.348411 ATGATAGGGGAGGCGTTTTG 57.652 50.000 0.00 0.00 0.00 2.44
2722 4436 0.254747 TGATAGGGGAGGCGTTTTGG 59.745 55.000 0.00 0.00 0.00 3.28
2723 4437 1.076995 ATAGGGGAGGCGTTTTGGC 60.077 57.895 0.00 0.00 45.27 4.52
2731 4445 3.659850 GGCGTTTTGGCTGAAAAGT 57.340 47.368 0.00 0.00 40.72 2.66
2732 4446 2.785713 GGCGTTTTGGCTGAAAAGTA 57.214 45.000 0.00 0.00 40.72 2.24
2733 4447 3.086818 GGCGTTTTGGCTGAAAAGTAA 57.913 42.857 0.00 0.00 40.72 2.24
2734 4448 3.649073 GGCGTTTTGGCTGAAAAGTAAT 58.351 40.909 0.00 0.00 40.72 1.89
2735 4449 4.055360 GGCGTTTTGGCTGAAAAGTAATT 58.945 39.130 0.00 0.00 40.72 1.40
2736 4450 4.149922 GGCGTTTTGGCTGAAAAGTAATTC 59.850 41.667 0.00 0.00 40.72 2.17
2737 4451 4.742659 GCGTTTTGGCTGAAAAGTAATTCA 59.257 37.500 0.00 0.00 34.10 2.57
2738 4452 5.233263 GCGTTTTGGCTGAAAAGTAATTCAA 59.767 36.000 0.00 0.00 38.75 2.69
2739 4453 6.237969 GCGTTTTGGCTGAAAAGTAATTCAAA 60.238 34.615 0.00 0.00 38.75 2.69
2740 4454 7.675170 GCGTTTTGGCTGAAAAGTAATTCAAAA 60.675 33.333 0.00 0.00 38.75 2.44
2741 4455 8.171840 CGTTTTGGCTGAAAAGTAATTCAAAAA 58.828 29.630 0.00 0.00 38.75 1.94
2742 4456 9.489393 GTTTTGGCTGAAAAGTAATTCAAAAAG 57.511 29.630 0.00 0.00 38.75 2.27
2743 4457 9.442047 TTTTGGCTGAAAAGTAATTCAAAAAGA 57.558 25.926 0.00 0.00 38.75 2.52
2744 4458 9.442047 TTTGGCTGAAAAGTAATTCAAAAAGAA 57.558 25.926 0.00 0.00 38.75 2.52
2745 4459 8.647143 TGGCTGAAAAGTAATTCAAAAAGAAG 57.353 30.769 0.00 0.00 40.15 2.85
2746 4460 8.257306 TGGCTGAAAAGTAATTCAAAAAGAAGT 58.743 29.630 0.00 0.00 40.15 3.01
2747 4461 8.542953 GGCTGAAAAGTAATTCAAAAAGAAGTG 58.457 33.333 0.00 0.00 40.15 3.16
2748 4462 8.542953 GCTGAAAAGTAATTCAAAAAGAAGTGG 58.457 33.333 0.00 0.00 40.15 4.00
2749 4463 9.586435 CTGAAAAGTAATTCAAAAAGAAGTGGT 57.414 29.630 0.00 0.00 40.15 4.16
2760 4474 8.710835 TCAAAAAGAAGTGGTAAAATGTTTCC 57.289 30.769 0.00 0.00 0.00 3.13
2761 4475 8.314751 TCAAAAAGAAGTGGTAAAATGTTTCCA 58.685 29.630 0.00 0.00 32.20 3.53
2762 4476 8.940952 CAAAAAGAAGTGGTAAAATGTTTCCAA 58.059 29.630 0.00 0.00 36.10 3.53
2763 4477 9.679661 AAAAAGAAGTGGTAAAATGTTTCCAAT 57.320 25.926 0.00 0.00 36.10 3.16
2764 4478 9.679661 AAAAGAAGTGGTAAAATGTTTCCAATT 57.320 25.926 6.67 6.67 42.80 2.32
2765 4479 9.679661 AAAGAAGTGGTAAAATGTTTCCAATTT 57.320 25.926 8.19 1.26 40.98 1.82
2766 4480 9.679661 AAGAAGTGGTAAAATGTTTCCAATTTT 57.320 25.926 8.19 0.79 40.98 1.82
2767 4481 9.325198 AGAAGTGGTAAAATGTTTCCAATTTTC 57.675 29.630 8.19 7.17 40.98 2.29
2768 4482 9.325198 GAAGTGGTAAAATGTTTCCAATTTTCT 57.675 29.630 8.19 0.00 40.98 2.52
2769 4483 9.679661 AAGTGGTAAAATGTTTCCAATTTTCTT 57.320 25.926 1.48 0.00 38.77 2.52
2770 4484 9.679661 AGTGGTAAAATGTTTCCAATTTTCTTT 57.320 25.926 0.00 0.00 36.10 2.52
2793 4507 6.424176 TTTTGAATGTTCGTGTTAGTGTCA 57.576 33.333 0.00 0.00 0.00 3.58
2794 4508 6.612247 TTTGAATGTTCGTGTTAGTGTCAT 57.388 33.333 0.00 0.00 0.00 3.06
2795 4509 7.716768 TTTGAATGTTCGTGTTAGTGTCATA 57.283 32.000 0.00 0.00 0.00 2.15
2796 4510 7.716768 TTGAATGTTCGTGTTAGTGTCATAA 57.283 32.000 0.00 0.00 0.00 1.90
2797 4511 7.346208 TGAATGTTCGTGTTAGTGTCATAAG 57.654 36.000 0.00 0.00 0.00 1.73
2798 4512 5.779806 ATGTTCGTGTTAGTGTCATAAGC 57.220 39.130 0.00 0.00 0.00 3.09
2799 4513 3.671459 TGTTCGTGTTAGTGTCATAAGCG 59.329 43.478 0.00 0.00 0.00 4.68
2800 4514 3.564235 TCGTGTTAGTGTCATAAGCGT 57.436 42.857 0.00 0.00 0.00 5.07
2801 4515 3.239254 TCGTGTTAGTGTCATAAGCGTG 58.761 45.455 0.00 0.00 0.00 5.34
2802 4516 2.222508 CGTGTTAGTGTCATAAGCGTGC 60.223 50.000 0.00 0.00 0.00 5.34
2803 4517 2.993899 GTGTTAGTGTCATAAGCGTGCT 59.006 45.455 0.00 0.00 0.00 4.40
2804 4518 2.993220 TGTTAGTGTCATAAGCGTGCTG 59.007 45.455 0.00 0.00 0.00 4.41
2805 4519 3.250744 GTTAGTGTCATAAGCGTGCTGA 58.749 45.455 0.00 0.00 0.00 4.26
2806 4520 2.001812 AGTGTCATAAGCGTGCTGAG 57.998 50.000 0.00 0.00 0.00 3.35
2807 4521 1.273606 AGTGTCATAAGCGTGCTGAGT 59.726 47.619 0.00 0.00 0.00 3.41
2808 4522 1.391485 GTGTCATAAGCGTGCTGAGTG 59.609 52.381 0.00 0.00 0.00 3.51
2809 4523 1.000843 TGTCATAAGCGTGCTGAGTGT 59.999 47.619 0.00 0.00 0.00 3.55
2810 4524 2.069273 GTCATAAGCGTGCTGAGTGTT 58.931 47.619 0.00 0.00 0.00 3.32
2811 4525 2.480419 GTCATAAGCGTGCTGAGTGTTT 59.520 45.455 0.00 0.00 0.00 2.83
2812 4526 2.736721 TCATAAGCGTGCTGAGTGTTTC 59.263 45.455 0.00 0.00 0.00 2.78
2813 4527 2.232756 TAAGCGTGCTGAGTGTTTCA 57.767 45.000 0.00 0.00 0.00 2.69
2814 4528 1.597742 AAGCGTGCTGAGTGTTTCAT 58.402 45.000 0.00 0.00 34.68 2.57
2815 4529 1.151668 AGCGTGCTGAGTGTTTCATC 58.848 50.000 0.00 0.00 34.68 2.92
2816 4530 0.179240 GCGTGCTGAGTGTTTCATCG 60.179 55.000 0.00 0.00 34.68 3.84
2817 4531 0.439985 CGTGCTGAGTGTTTCATCGG 59.560 55.000 0.00 0.00 34.68 4.18
2818 4532 1.512926 GTGCTGAGTGTTTCATCGGT 58.487 50.000 0.00 0.00 34.68 4.69
2819 4533 1.195448 GTGCTGAGTGTTTCATCGGTG 59.805 52.381 0.00 0.00 34.68 4.94
2820 4534 1.069978 TGCTGAGTGTTTCATCGGTGA 59.930 47.619 0.00 0.00 34.68 4.02
2821 4535 2.143122 GCTGAGTGTTTCATCGGTGAA 58.857 47.619 7.11 7.11 42.41 3.18
2837 4551 9.593134 TCATCGGTGAAAATAAATAAATTTGGG 57.407 29.630 0.00 0.00 0.00 4.12
2838 4552 8.825745 CATCGGTGAAAATAAATAAATTTGGGG 58.174 33.333 0.00 0.00 0.00 4.96
2839 4553 7.331791 TCGGTGAAAATAAATAAATTTGGGGG 58.668 34.615 0.00 0.00 0.00 5.40
2840 4554 7.038231 TCGGTGAAAATAAATAAATTTGGGGGT 60.038 33.333 0.00 0.00 0.00 4.95
2841 4555 7.065204 CGGTGAAAATAAATAAATTTGGGGGTG 59.935 37.037 0.00 0.00 0.00 4.61
2842 4556 8.103935 GGTGAAAATAAATAAATTTGGGGGTGA 58.896 33.333 0.00 0.00 0.00 4.02
2843 4557 8.941977 GTGAAAATAAATAAATTTGGGGGTGAC 58.058 33.333 0.00 0.00 0.00 3.67
2844 4558 8.660435 TGAAAATAAATAAATTTGGGGGTGACA 58.340 29.630 0.00 0.00 0.00 3.58
2845 4559 9.679661 GAAAATAAATAAATTTGGGGGTGACAT 57.320 29.630 0.00 0.00 0.00 3.06
2851 4565 9.868160 AAATAAATTTGGGGGTGACATTTTTAA 57.132 25.926 0.00 0.00 0.00 1.52
2852 4566 9.513906 AATAAATTTGGGGGTGACATTTTTAAG 57.486 29.630 0.00 0.00 0.00 1.85
2853 4567 4.965200 TTTGGGGGTGACATTTTTAAGG 57.035 40.909 0.00 0.00 0.00 2.69
2854 4568 2.896039 TGGGGGTGACATTTTTAAGGG 58.104 47.619 0.00 0.00 0.00 3.95
2855 4569 2.180308 TGGGGGTGACATTTTTAAGGGT 59.820 45.455 0.00 0.00 0.00 4.34
2856 4570 3.401683 TGGGGGTGACATTTTTAAGGGTA 59.598 43.478 0.00 0.00 0.00 3.69
2857 4571 4.140758 TGGGGGTGACATTTTTAAGGGTAA 60.141 41.667 0.00 0.00 0.00 2.85
2858 4572 4.221262 GGGGGTGACATTTTTAAGGGTAAC 59.779 45.833 0.00 0.00 0.00 2.50
2859 4573 4.833938 GGGGTGACATTTTTAAGGGTAACA 59.166 41.667 0.00 0.00 39.74 2.41
2860 4574 5.482526 GGGGTGACATTTTTAAGGGTAACAT 59.517 40.000 0.00 0.00 39.74 2.71
2861 4575 6.014070 GGGGTGACATTTTTAAGGGTAACATT 60.014 38.462 0.00 0.00 46.24 2.71
2862 4576 7.446769 GGGTGACATTTTTAAGGGTAACATTT 58.553 34.615 0.00 0.00 37.19 2.32
2863 4577 7.386573 GGGTGACATTTTTAAGGGTAACATTTG 59.613 37.037 0.00 0.00 37.19 2.32
2864 4578 7.386573 GGTGACATTTTTAAGGGTAACATTTGG 59.613 37.037 0.00 0.00 37.19 3.28
2865 4579 7.929245 GTGACATTTTTAAGGGTAACATTTGGT 59.071 33.333 0.00 0.00 37.19 3.67
2866 4580 7.928706 TGACATTTTTAAGGGTAACATTTGGTG 59.071 33.333 0.00 0.00 37.19 4.17
2867 4581 7.797062 ACATTTTTAAGGGTAACATTTGGTGT 58.203 30.769 0.00 0.00 37.19 4.16
2898 4612 5.850557 TTTTTCTCAGACCAAAATGCTCA 57.149 34.783 0.00 0.00 0.00 4.26
2899 4613 5.850557 TTTTCTCAGACCAAAATGCTCAA 57.149 34.783 0.00 0.00 0.00 3.02
2900 4614 4.836125 TTCTCAGACCAAAATGCTCAAC 57.164 40.909 0.00 0.00 0.00 3.18
2901 4615 4.090761 TCTCAGACCAAAATGCTCAACT 57.909 40.909 0.00 0.00 0.00 3.16
2902 4616 4.464008 TCTCAGACCAAAATGCTCAACTT 58.536 39.130 0.00 0.00 0.00 2.66
2903 4617 4.889409 TCTCAGACCAAAATGCTCAACTTT 59.111 37.500 0.00 0.00 0.00 2.66
2904 4618 5.360714 TCTCAGACCAAAATGCTCAACTTTT 59.639 36.000 0.00 0.00 0.00 2.27
2905 4619 5.976458 TCAGACCAAAATGCTCAACTTTTT 58.024 33.333 0.00 0.00 36.38 1.94
2927 4641 4.173036 TGCATAAAACTTTGCAGGTAGC 57.827 40.909 0.00 0.00 43.54 3.58
2938 4652 2.927553 GCAGGTAGCATTTGGAAGTG 57.072 50.000 0.00 0.00 44.79 3.16
2939 4653 2.436417 GCAGGTAGCATTTGGAAGTGA 58.564 47.619 0.00 0.00 44.79 3.41
2940 4654 2.162408 GCAGGTAGCATTTGGAAGTGAC 59.838 50.000 0.00 0.00 44.79 3.67
2941 4655 3.679389 CAGGTAGCATTTGGAAGTGACT 58.321 45.455 0.00 0.00 0.00 3.41
2942 4656 4.832248 CAGGTAGCATTTGGAAGTGACTA 58.168 43.478 0.00 0.00 0.00 2.59
2943 4657 5.431765 CAGGTAGCATTTGGAAGTGACTAT 58.568 41.667 0.00 0.00 0.00 2.12
2944 4658 5.295292 CAGGTAGCATTTGGAAGTGACTATG 59.705 44.000 0.00 0.00 0.00 2.23
2945 4659 5.189736 AGGTAGCATTTGGAAGTGACTATGA 59.810 40.000 0.00 0.00 0.00 2.15
2946 4660 5.880332 GGTAGCATTTGGAAGTGACTATGAA 59.120 40.000 0.00 0.00 0.00 2.57
2947 4661 6.543831 GGTAGCATTTGGAAGTGACTATGAAT 59.456 38.462 0.00 0.00 0.00 2.57
2948 4662 7.715249 GGTAGCATTTGGAAGTGACTATGAATA 59.285 37.037 0.00 0.00 0.00 1.75
2949 4663 7.559590 AGCATTTGGAAGTGACTATGAATAC 57.440 36.000 0.00 0.00 0.00 1.89
2950 4664 7.112122 AGCATTTGGAAGTGACTATGAATACA 58.888 34.615 0.00 0.00 0.00 2.29
2951 4665 7.066284 AGCATTTGGAAGTGACTATGAATACAC 59.934 37.037 0.00 0.00 0.00 2.90
2952 4666 7.148255 GCATTTGGAAGTGACTATGAATACACA 60.148 37.037 0.00 0.00 35.97 3.72
2953 4667 8.729756 CATTTGGAAGTGACTATGAATACACAA 58.270 33.333 0.00 0.00 35.97 3.33
2954 4668 8.684386 TTTGGAAGTGACTATGAATACACAAA 57.316 30.769 0.00 0.00 35.97 2.83
2955 4669 8.684386 TTGGAAGTGACTATGAATACACAAAA 57.316 30.769 0.00 0.00 35.97 2.44
2956 4670 8.684386 TGGAAGTGACTATGAATACACAAAAA 57.316 30.769 0.00 0.00 35.97 1.94
3001 4715 8.267621 ACATTTTAAAAATCAATTTTGCACGC 57.732 26.923 4.44 0.00 41.29 5.34
3002 4716 7.912250 ACATTTTAAAAATCAATTTTGCACGCA 59.088 25.926 4.44 0.00 41.29 5.24
3003 4717 7.889315 TTTTAAAAATCAATTTTGCACGCAG 57.111 28.000 0.00 0.00 41.29 5.18
3004 4718 6.834959 TTAAAAATCAATTTTGCACGCAGA 57.165 29.167 1.67 0.00 41.29 4.26
3005 4719 5.731599 AAAAATCAATTTTGCACGCAGAA 57.268 30.435 1.67 0.00 39.73 3.02
3006 4720 4.977741 AAATCAATTTTGCACGCAGAAG 57.022 36.364 1.36 0.00 0.00 2.85
3007 4721 1.769733 TCAATTTTGCACGCAGAAGC 58.230 45.000 1.36 0.00 37.42 3.86
3008 4722 1.337703 TCAATTTTGCACGCAGAAGCT 59.662 42.857 1.36 0.00 39.10 3.74
3009 4723 1.717645 CAATTTTGCACGCAGAAGCTC 59.282 47.619 1.36 0.00 39.10 4.09
3010 4724 1.242076 ATTTTGCACGCAGAAGCTCT 58.758 45.000 1.36 0.00 39.10 4.09
3011 4725 0.588252 TTTTGCACGCAGAAGCTCTC 59.412 50.000 0.00 0.00 39.10 3.20
3012 4726 1.230635 TTTGCACGCAGAAGCTCTCC 61.231 55.000 0.00 0.00 39.10 3.71
3013 4727 2.817396 GCACGCAGAAGCTCTCCC 60.817 66.667 0.00 0.00 39.10 4.30
3014 4728 2.507992 CACGCAGAAGCTCTCCCG 60.508 66.667 0.00 0.00 39.10 5.14
3015 4729 3.764466 ACGCAGAAGCTCTCCCGG 61.764 66.667 0.00 0.00 39.10 5.73
3016 4730 4.521062 CGCAGAAGCTCTCCCGGG 62.521 72.222 16.85 16.85 39.10 5.73
3017 4731 3.077556 GCAGAAGCTCTCCCGGGA 61.078 66.667 25.06 25.06 37.91 5.14
3018 4732 3.087666 GCAGAAGCTCTCCCGGGAG 62.088 68.421 40.33 40.33 43.21 4.30
3024 4738 3.324713 CTCTCCCGGGAGCCAAAT 58.675 61.111 40.97 0.00 41.71 2.32
3025 4739 1.609783 CTCTCCCGGGAGCCAAATT 59.390 57.895 40.97 0.00 41.71 1.82
3026 4740 0.749454 CTCTCCCGGGAGCCAAATTG 60.749 60.000 40.97 19.91 41.71 2.32
3027 4741 1.754234 CTCCCGGGAGCCAAATTGG 60.754 63.158 36.90 12.11 41.55 3.16
3028 4742 2.210144 CTCCCGGGAGCCAAATTGGA 62.210 60.000 36.90 3.41 39.92 3.53
3029 4743 1.076044 CCCGGGAGCCAAATTGGAT 60.076 57.895 18.48 10.02 39.95 3.41
3030 4744 0.184933 CCCGGGAGCCAAATTGGATA 59.815 55.000 18.48 0.00 35.51 2.59
3031 4745 1.203050 CCCGGGAGCCAAATTGGATAT 60.203 52.381 18.48 0.00 35.51 1.63
3032 4746 2.162681 CCGGGAGCCAAATTGGATATC 58.837 52.381 17.47 9.73 35.51 1.63
3033 4747 2.162681 CGGGAGCCAAATTGGATATCC 58.837 52.381 17.47 17.63 35.51 2.59
3034 4748 2.162681 GGGAGCCAAATTGGATATCCG 58.837 52.381 17.47 2.61 35.51 4.18
3035 4749 1.541588 GGAGCCAAATTGGATATCCGC 59.458 52.381 17.47 12.42 35.51 5.54
3036 4750 1.197721 GAGCCAAATTGGATATCCGCG 59.802 52.381 17.47 0.00 35.51 6.46
3037 4751 1.202758 AGCCAAATTGGATATCCGCGA 60.203 47.619 17.47 6.04 40.96 5.87
3038 4752 1.069227 GCCAAATTGGATATCCGCGAC 60.069 52.381 17.47 0.00 40.96 5.19
3039 4753 2.217750 CCAAATTGGATATCCGCGACA 58.782 47.619 17.04 0.00 40.96 4.35
3040 4754 2.616376 CCAAATTGGATATCCGCGACAA 59.384 45.455 17.04 5.63 40.96 3.18
3041 4755 3.253188 CCAAATTGGATATCCGCGACAAT 59.747 43.478 17.04 7.75 40.96 2.71
3042 4756 4.454161 CCAAATTGGATATCCGCGACAATA 59.546 41.667 17.04 2.68 40.96 1.90
3043 4757 5.382303 CAAATTGGATATCCGCGACAATAC 58.618 41.667 17.04 0.00 39.43 1.89
3044 4758 2.341318 TGGATATCCGCGACAATACG 57.659 50.000 17.04 0.00 39.43 3.06
3045 4759 1.881324 TGGATATCCGCGACAATACGA 59.119 47.619 17.04 0.00 39.43 3.43
3046 4760 2.095415 TGGATATCCGCGACAATACGAG 60.095 50.000 17.04 0.00 39.43 4.18
3047 4761 1.912110 GATATCCGCGACAATACGAGC 59.088 52.381 8.23 0.00 35.09 5.03
3048 4762 0.949397 TATCCGCGACAATACGAGCT 59.051 50.000 8.23 0.00 35.09 4.09
3049 4763 0.595053 ATCCGCGACAATACGAGCTG 60.595 55.000 8.23 0.00 35.09 4.24
3050 4764 2.230940 CCGCGACAATACGAGCTGG 61.231 63.158 8.23 0.00 35.09 4.85
3051 4765 2.860628 CGCGACAATACGAGCTGGC 61.861 63.158 0.00 0.00 35.09 4.85
3052 4766 1.809619 GCGACAATACGAGCTGGCA 60.810 57.895 0.00 0.00 35.09 4.92
3053 4767 1.756375 GCGACAATACGAGCTGGCAG 61.756 60.000 10.94 10.94 35.09 4.85
3054 4768 0.179137 CGACAATACGAGCTGGCAGA 60.179 55.000 20.86 0.00 35.09 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 2.204306 AAGGAGGGGAAGGGGGTG 60.204 66.667 0.00 0.00 0.00 4.61
62 63 1.203557 TGAGGATTGGAAGGAGGGGAA 60.204 52.381 0.00 0.00 0.00 3.97
83 84 2.338620 CGTTCGTGGGAGCTGTGA 59.661 61.111 0.00 0.00 0.00 3.58
95 96 1.068816 GGGATTTGTTGGTTCCGTTCG 60.069 52.381 0.00 0.00 0.00 3.95
186 196 1.302907 ACATGGAGAGGGGAAGCAAT 58.697 50.000 0.00 0.00 0.00 3.56
241 275 4.434989 CGACGAAATTCCGCAATTCTACAA 60.435 41.667 0.00 0.00 30.37 2.41
247 281 1.161843 ACCGACGAAATTCCGCAATT 58.838 45.000 0.00 0.00 33.27 2.32
274 309 2.540101 CGTTCCCAAAGTATCAGATCGC 59.460 50.000 0.00 0.00 0.00 4.58
284 319 2.249844 ACACGAATCGTTCCCAAAGT 57.750 45.000 5.20 0.00 38.32 2.66
287 322 1.868498 GACAACACGAATCGTTCCCAA 59.132 47.619 5.20 0.00 38.32 4.12
365 400 3.010027 TGCCCCTTCAATCAATCTACACA 59.990 43.478 0.00 0.00 0.00 3.72
515 667 3.525537 ACAAGAATATGACCACGAGCTG 58.474 45.455 0.00 0.00 0.00 4.24
524 676 8.569641 ACTATCTCGGTAGAACAAGAATATGAC 58.430 37.037 0.00 0.00 34.73 3.06
675 937 2.029290 TGAAGAGAACCTAACAGACGGC 60.029 50.000 0.00 0.00 0.00 5.68
716 983 8.044908 ACAGATGGTAGATAATAAACAAACGGT 58.955 33.333 0.00 0.00 0.00 4.83
820 1103 0.933097 GTAGGTGCATGCTCATGACG 59.067 55.000 20.33 0.00 41.20 4.35
941 1311 1.952296 AGAAGCAGACCAAGCAAACTG 59.048 47.619 0.00 0.00 0.00 3.16
1221 2186 0.883814 CGAAGATCTGCATGCCTCCC 60.884 60.000 16.68 2.05 0.00 4.30
1242 2911 1.672356 CTTGCCGGTGAGGGTCTTG 60.672 63.158 1.90 0.00 41.48 3.02
1269 2938 1.552337 TCAGATGACTCCACCTCAAGC 59.448 52.381 0.00 0.00 0.00 4.01
1302 2971 0.329261 CCTGGATCTTGGCCTTGACA 59.671 55.000 3.32 0.00 0.00 3.58
1350 3019 2.482326 GCCAGCAAAGATAAGGCGT 58.518 52.632 0.00 0.00 35.42 5.68
1903 3572 2.191400 CCTCCTTGTCCTGGATCTTGA 58.809 52.381 0.00 0.00 32.56 3.02
1988 3657 1.990799 TCTGAATGTTGTAGTCCGCG 58.009 50.000 0.00 0.00 0.00 6.46
2160 3841 2.156891 CCAACACGTAACAGTGATTCGG 59.843 50.000 0.00 0.00 44.43 4.30
2164 3847 3.242936 GCAAACCAACACGTAACAGTGAT 60.243 43.478 0.00 0.00 44.43 3.06
2196 3880 6.992715 AGTACTTGAAATGAAACTGCTGTACT 59.007 34.615 0.00 0.00 34.14 2.73
2216 3900 9.367444 CCGAAAGTTCACTTATTCATTAGTACT 57.633 33.333 0.00 0.00 34.61 2.73
2217 3901 8.601476 CCCGAAAGTTCACTTATTCATTAGTAC 58.399 37.037 0.00 0.00 34.61 2.73
2218 3902 8.316214 ACCCGAAAGTTCACTTATTCATTAGTA 58.684 33.333 0.00 0.00 34.61 1.82
2219 3903 7.166167 ACCCGAAAGTTCACTTATTCATTAGT 58.834 34.615 0.00 0.00 34.61 2.24
2220 3904 7.611213 ACCCGAAAGTTCACTTATTCATTAG 57.389 36.000 0.00 0.00 34.61 1.73
2325 4033 4.571372 ATCTTACAGCTAACGAGTAGGC 57.429 45.455 0.00 0.00 0.00 3.93
2373 4082 0.532417 CAGAGGCAGCAGTAGCATCC 60.532 60.000 0.00 0.00 43.26 3.51
2375 4084 0.979709 TCCAGAGGCAGCAGTAGCAT 60.980 55.000 0.00 0.00 45.49 3.79
2376 4085 1.194121 TTCCAGAGGCAGCAGTAGCA 61.194 55.000 0.00 0.00 45.49 3.49
2377 4086 0.742635 GTTCCAGAGGCAGCAGTAGC 60.743 60.000 0.00 0.00 42.56 3.58
2378 4087 0.901124 AGTTCCAGAGGCAGCAGTAG 59.099 55.000 0.00 0.00 0.00 2.57
2380 4089 0.901124 CTAGTTCCAGAGGCAGCAGT 59.099 55.000 0.00 0.00 0.00 4.40
2381 4090 1.189752 TCTAGTTCCAGAGGCAGCAG 58.810 55.000 0.00 0.00 0.00 4.24
2384 4093 1.269517 GCGATCTAGTTCCAGAGGCAG 60.270 57.143 0.00 0.00 31.62 4.85
2385 4094 0.747255 GCGATCTAGTTCCAGAGGCA 59.253 55.000 0.00 0.00 31.62 4.75
2386 4095 1.036707 AGCGATCTAGTTCCAGAGGC 58.963 55.000 0.00 0.00 0.00 4.70
2387 4096 1.269517 GCAGCGATCTAGTTCCAGAGG 60.270 57.143 0.00 0.00 0.00 3.69
2388 4097 1.680735 AGCAGCGATCTAGTTCCAGAG 59.319 52.381 0.00 0.00 0.00 3.35
2389 4098 1.406898 CAGCAGCGATCTAGTTCCAGA 59.593 52.381 0.00 0.00 0.00 3.86
2390 4099 1.850377 CAGCAGCGATCTAGTTCCAG 58.150 55.000 0.00 0.00 0.00 3.86
2391 4100 0.179100 GCAGCAGCGATCTAGTTCCA 60.179 55.000 0.00 0.00 0.00 3.53
2392 4101 2.599216 GCAGCAGCGATCTAGTTCC 58.401 57.895 0.00 0.00 0.00 3.62
2403 4112 1.069296 TCACACAATTAACGCAGCAGC 60.069 47.619 0.00 0.00 37.42 5.25
2431 4140 7.552458 AAAATTGGGAGAATTTTTCACACAC 57.448 32.000 0.00 0.00 36.70 3.82
2437 4146 6.144854 GCTGCAAAAATTGGGAGAATTTTTC 58.855 36.000 12.65 9.57 43.77 2.29
2448 4157 0.600782 AGCCACGCTGCAAAAATTGG 60.601 50.000 0.00 0.00 37.57 3.16
2449 4158 1.987770 CTAGCCACGCTGCAAAAATTG 59.012 47.619 0.00 0.00 40.10 2.32
2450 4159 1.613437 ACTAGCCACGCTGCAAAAATT 59.387 42.857 0.00 0.00 40.10 1.82
2451 4160 1.247567 ACTAGCCACGCTGCAAAAAT 58.752 45.000 0.00 0.00 40.10 1.82
2470 4184 9.212687 CGAACACGTCAAAAGTTTTAAGAAATA 57.787 29.630 0.00 0.00 0.00 1.40
2478 4192 4.932268 TCTCGAACACGTCAAAAGTTTT 57.068 36.364 0.00 0.00 0.00 2.43
2479 4193 5.479716 AATCTCGAACACGTCAAAAGTTT 57.520 34.783 0.00 0.00 0.00 2.66
2480 4194 6.592798 TTAATCTCGAACACGTCAAAAGTT 57.407 33.333 0.00 0.00 0.00 2.66
2481 4195 6.780706 ATTAATCTCGAACACGTCAAAAGT 57.219 33.333 0.00 0.00 0.00 2.66
2482 4196 7.287950 TGAATTAATCTCGAACACGTCAAAAG 58.712 34.615 0.00 0.00 0.00 2.27
2483 4197 7.179927 TGAATTAATCTCGAACACGTCAAAA 57.820 32.000 0.00 0.00 0.00 2.44
2484 4198 6.772770 TGAATTAATCTCGAACACGTCAAA 57.227 33.333 0.00 0.00 0.00 2.69
2485 4199 6.772770 TTGAATTAATCTCGAACACGTCAA 57.227 33.333 0.00 0.00 0.00 3.18
2486 4200 6.772770 TTTGAATTAATCTCGAACACGTCA 57.227 33.333 0.00 0.00 0.00 4.35
2487 4201 7.425595 GGATTTTGAATTAATCTCGAACACGTC 59.574 37.037 0.00 0.00 33.51 4.34
2488 4202 7.241376 GGATTTTGAATTAATCTCGAACACGT 58.759 34.615 0.00 0.00 33.51 4.49
2489 4203 6.408039 CGGATTTTGAATTAATCTCGAACACG 59.592 38.462 0.00 0.00 33.51 4.49
2490 4204 7.461107 TCGGATTTTGAATTAATCTCGAACAC 58.539 34.615 8.97 0.00 34.68 3.32
2491 4205 7.603963 TCGGATTTTGAATTAATCTCGAACA 57.396 32.000 8.97 0.00 34.68 3.18
2492 4206 8.311894 GTTCGGATTTTGAATTAATCTCGAAC 57.688 34.615 22.70 22.70 45.11 3.95
2493 4207 8.035165 TGTTCGGATTTTGAATTAATCTCGAA 57.965 30.769 14.75 14.75 39.48 3.71
2494 4208 7.603963 TGTTCGGATTTTGAATTAATCTCGA 57.396 32.000 0.00 0.00 35.22 4.04
2495 4209 7.910162 ACATGTTCGGATTTTGAATTAATCTCG 59.090 33.333 0.00 0.00 33.51 4.04
2496 4210 9.573133 AACATGTTCGGATTTTGAATTAATCTC 57.427 29.630 4.92 0.00 33.51 2.75
2502 4216 8.788806 TGTAGTAACATGTTCGGATTTTGAATT 58.211 29.630 15.85 0.00 0.00 2.17
2503 4217 8.330466 TGTAGTAACATGTTCGGATTTTGAAT 57.670 30.769 15.85 0.00 0.00 2.57
2504 4218 7.731882 TGTAGTAACATGTTCGGATTTTGAA 57.268 32.000 15.85 0.00 0.00 2.69
2505 4219 7.201487 CGATGTAGTAACATGTTCGGATTTTGA 60.201 37.037 15.85 0.00 46.49 2.69
2506 4220 6.899771 CGATGTAGTAACATGTTCGGATTTTG 59.100 38.462 15.85 0.00 46.49 2.44
2507 4221 7.000575 CGATGTAGTAACATGTTCGGATTTT 57.999 36.000 15.85 0.00 46.49 1.82
2508 4222 6.583912 CGATGTAGTAACATGTTCGGATTT 57.416 37.500 15.85 0.00 46.49 2.17
2513 4227 4.032445 CCAACCGATGTAGTAACATGTTCG 59.968 45.833 15.85 10.56 46.49 3.95
2514 4228 5.063060 GTCCAACCGATGTAGTAACATGTTC 59.937 44.000 15.85 7.12 46.49 3.18
2515 4229 4.933400 GTCCAACCGATGTAGTAACATGTT 59.067 41.667 16.68 16.68 46.49 2.71
2516 4230 4.020928 TGTCCAACCGATGTAGTAACATGT 60.021 41.667 0.00 0.00 46.49 3.21
2517 4231 4.500127 TGTCCAACCGATGTAGTAACATG 58.500 43.478 0.00 0.00 46.49 3.21
2519 4233 4.020928 ACATGTCCAACCGATGTAGTAACA 60.021 41.667 0.00 0.00 40.69 2.41
2520 4234 4.328983 CACATGTCCAACCGATGTAGTAAC 59.671 45.833 0.00 0.00 0.00 2.50
2521 4235 4.500127 CACATGTCCAACCGATGTAGTAA 58.500 43.478 0.00 0.00 0.00 2.24
2522 4236 3.677700 GCACATGTCCAACCGATGTAGTA 60.678 47.826 0.00 0.00 0.00 1.82
2523 4237 2.935238 GCACATGTCCAACCGATGTAGT 60.935 50.000 0.00 0.00 0.00 2.73
2524 4238 1.665679 GCACATGTCCAACCGATGTAG 59.334 52.381 0.00 0.00 0.00 2.74
2525 4239 1.732941 GCACATGTCCAACCGATGTA 58.267 50.000 0.00 0.00 0.00 2.29
2526 4240 1.298157 CGCACATGTCCAACCGATGT 61.298 55.000 0.00 0.00 0.00 3.06
2527 4241 1.425031 CGCACATGTCCAACCGATG 59.575 57.895 0.00 0.00 0.00 3.84
2528 4242 1.745115 CCGCACATGTCCAACCGAT 60.745 57.895 0.00 0.00 0.00 4.18
2529 4243 2.358125 CCGCACATGTCCAACCGA 60.358 61.111 0.00 0.00 0.00 4.69
2530 4244 4.101790 GCCGCACATGTCCAACCG 62.102 66.667 0.00 0.00 0.00 4.44
2531 4245 2.672996 AGCCGCACATGTCCAACC 60.673 61.111 0.00 0.00 0.00 3.77
2532 4246 1.237285 AAGAGCCGCACATGTCCAAC 61.237 55.000 0.00 0.00 0.00 3.77
2533 4247 0.537143 AAAGAGCCGCACATGTCCAA 60.537 50.000 0.00 0.00 0.00 3.53
2534 4248 0.955428 GAAAGAGCCGCACATGTCCA 60.955 55.000 0.00 0.00 0.00 4.02
2535 4249 1.796796 GAAAGAGCCGCACATGTCC 59.203 57.895 0.00 0.00 0.00 4.02
2536 4250 1.421485 CGAAAGAGCCGCACATGTC 59.579 57.895 0.00 0.00 0.00 3.06
2537 4251 2.034879 CCGAAAGAGCCGCACATGT 61.035 57.895 0.00 0.00 0.00 3.21
2538 4252 2.753966 CCCGAAAGAGCCGCACATG 61.754 63.158 0.00 0.00 0.00 3.21
2539 4253 2.436646 CCCGAAAGAGCCGCACAT 60.437 61.111 0.00 0.00 0.00 3.21
2542 4256 4.408821 ATGCCCGAAAGAGCCGCA 62.409 61.111 0.00 0.00 0.00 5.69
2543 4257 3.577313 GATGCCCGAAAGAGCCGC 61.577 66.667 0.00 0.00 0.00 6.53
2544 4258 1.450312 AAGATGCCCGAAAGAGCCG 60.450 57.895 0.00 0.00 0.00 5.52
2545 4259 1.379642 CCAAGATGCCCGAAAGAGCC 61.380 60.000 0.00 0.00 0.00 4.70
2546 4260 0.392998 TCCAAGATGCCCGAAAGAGC 60.393 55.000 0.00 0.00 0.00 4.09
2547 4261 2.338577 ATCCAAGATGCCCGAAAGAG 57.661 50.000 0.00 0.00 0.00 2.85
2548 4262 3.924114 TTATCCAAGATGCCCGAAAGA 57.076 42.857 0.00 0.00 0.00 2.52
2549 4263 5.308825 AGTATTATCCAAGATGCCCGAAAG 58.691 41.667 0.00 0.00 0.00 2.62
2550 4264 5.304686 AGTATTATCCAAGATGCCCGAAA 57.695 39.130 0.00 0.00 0.00 3.46
2551 4265 4.974645 AGTATTATCCAAGATGCCCGAA 57.025 40.909 0.00 0.00 0.00 4.30
2552 4266 5.084519 AGTAGTATTATCCAAGATGCCCGA 58.915 41.667 0.00 0.00 0.00 5.14
2553 4267 5.407407 AGTAGTATTATCCAAGATGCCCG 57.593 43.478 0.00 0.00 0.00 6.13
2554 4268 8.154856 TGTTTAGTAGTATTATCCAAGATGCCC 58.845 37.037 0.00 0.00 0.00 5.36
2555 4269 9.555727 TTGTTTAGTAGTATTATCCAAGATGCC 57.444 33.333 0.00 0.00 0.00 4.40
2559 4273 9.609346 GCCTTTGTTTAGTAGTATTATCCAAGA 57.391 33.333 0.00 0.00 0.00 3.02
2560 4274 8.837389 GGCCTTTGTTTAGTAGTATTATCCAAG 58.163 37.037 0.00 0.00 0.00 3.61
2561 4275 7.496591 CGGCCTTTGTTTAGTAGTATTATCCAA 59.503 37.037 0.00 0.00 0.00 3.53
2562 4276 6.987992 CGGCCTTTGTTTAGTAGTATTATCCA 59.012 38.462 0.00 0.00 0.00 3.41
2563 4277 6.073385 GCGGCCTTTGTTTAGTAGTATTATCC 60.073 42.308 0.00 0.00 0.00 2.59
2564 4278 6.704937 AGCGGCCTTTGTTTAGTAGTATTATC 59.295 38.462 0.00 0.00 0.00 1.75
2565 4279 6.589135 AGCGGCCTTTGTTTAGTAGTATTAT 58.411 36.000 0.00 0.00 0.00 1.28
2566 4280 5.981174 AGCGGCCTTTGTTTAGTAGTATTA 58.019 37.500 0.00 0.00 0.00 0.98
2567 4281 4.840271 AGCGGCCTTTGTTTAGTAGTATT 58.160 39.130 0.00 0.00 0.00 1.89
2568 4282 4.482952 AGCGGCCTTTGTTTAGTAGTAT 57.517 40.909 0.00 0.00 0.00 2.12
2569 4283 3.967332 AGCGGCCTTTGTTTAGTAGTA 57.033 42.857 0.00 0.00 0.00 1.82
2570 4284 2.853235 AGCGGCCTTTGTTTAGTAGT 57.147 45.000 0.00 0.00 0.00 2.73
2571 4285 2.934553 GGTAGCGGCCTTTGTTTAGTAG 59.065 50.000 0.00 0.00 0.00 2.57
2572 4286 2.355007 GGGTAGCGGCCTTTGTTTAGTA 60.355 50.000 0.00 0.00 0.00 1.82
2573 4287 1.612462 GGGTAGCGGCCTTTGTTTAGT 60.612 52.381 0.00 0.00 0.00 2.24
2574 4288 1.092348 GGGTAGCGGCCTTTGTTTAG 58.908 55.000 0.00 0.00 0.00 1.85
2575 4289 0.694196 AGGGTAGCGGCCTTTGTTTA 59.306 50.000 0.00 0.00 0.00 2.01
2576 4290 0.694196 TAGGGTAGCGGCCTTTGTTT 59.306 50.000 0.00 0.00 0.00 2.83
2577 4291 0.694196 TTAGGGTAGCGGCCTTTGTT 59.306 50.000 0.00 0.00 0.00 2.83
2578 4292 0.694196 TTTAGGGTAGCGGCCTTTGT 59.306 50.000 0.00 0.00 0.00 2.83
2579 4293 1.828979 TTTTAGGGTAGCGGCCTTTG 58.171 50.000 0.00 0.00 0.00 2.77
2580 4294 2.820728 ATTTTAGGGTAGCGGCCTTT 57.179 45.000 0.00 0.00 0.00 3.11
2581 4295 3.937778 TTATTTTAGGGTAGCGGCCTT 57.062 42.857 0.00 0.00 0.00 4.35
2582 4296 3.201487 AGTTTATTTTAGGGTAGCGGCCT 59.799 43.478 0.00 0.00 0.00 5.19
2583 4297 3.314357 CAGTTTATTTTAGGGTAGCGGCC 59.686 47.826 0.00 0.00 0.00 6.13
2584 4298 3.314357 CCAGTTTATTTTAGGGTAGCGGC 59.686 47.826 0.00 0.00 0.00 6.53
2585 4299 4.773013 TCCAGTTTATTTTAGGGTAGCGG 58.227 43.478 0.00 0.00 0.00 5.52
2586 4300 6.746745 TTTCCAGTTTATTTTAGGGTAGCG 57.253 37.500 0.00 0.00 0.00 4.26
2587 4301 8.967918 AGAATTTCCAGTTTATTTTAGGGTAGC 58.032 33.333 0.00 0.00 0.00 3.58
2623 4337 8.579863 GCCAGTTGAAGCCTATGATTTATTTAT 58.420 33.333 0.00 0.00 0.00 1.40
2624 4338 7.559533 TGCCAGTTGAAGCCTATGATTTATTTA 59.440 33.333 0.00 0.00 0.00 1.40
2625 4339 6.380846 TGCCAGTTGAAGCCTATGATTTATTT 59.619 34.615 0.00 0.00 0.00 1.40
2626 4340 5.893255 TGCCAGTTGAAGCCTATGATTTATT 59.107 36.000 0.00 0.00 0.00 1.40
2627 4341 5.448654 TGCCAGTTGAAGCCTATGATTTAT 58.551 37.500 0.00 0.00 0.00 1.40
2628 4342 4.854173 TGCCAGTTGAAGCCTATGATTTA 58.146 39.130 0.00 0.00 0.00 1.40
2629 4343 3.698040 CTGCCAGTTGAAGCCTATGATTT 59.302 43.478 0.00 0.00 0.00 2.17
2630 4344 3.054139 TCTGCCAGTTGAAGCCTATGATT 60.054 43.478 0.00 0.00 0.00 2.57
2631 4345 2.507058 TCTGCCAGTTGAAGCCTATGAT 59.493 45.455 0.00 0.00 0.00 2.45
2632 4346 1.908619 TCTGCCAGTTGAAGCCTATGA 59.091 47.619 0.00 0.00 0.00 2.15
2633 4347 2.408271 TCTGCCAGTTGAAGCCTATG 57.592 50.000 0.00 0.00 0.00 2.23
2634 4348 3.201708 AGATTCTGCCAGTTGAAGCCTAT 59.798 43.478 0.00 0.00 29.89 2.57
2635 4349 2.573462 AGATTCTGCCAGTTGAAGCCTA 59.427 45.455 0.00 0.00 29.89 3.93
2636 4350 1.353694 AGATTCTGCCAGTTGAAGCCT 59.646 47.619 0.00 0.00 29.89 4.58
2637 4351 1.831580 AGATTCTGCCAGTTGAAGCC 58.168 50.000 0.00 0.00 29.89 4.35
2638 4352 5.573337 AAATAGATTCTGCCAGTTGAAGC 57.427 39.130 0.00 0.00 0.00 3.86
2639 4353 7.149569 TGAAAATAGATTCTGCCAGTTGAAG 57.850 36.000 0.00 0.00 0.00 3.02
2640 4354 7.523293 TTGAAAATAGATTCTGCCAGTTGAA 57.477 32.000 0.00 0.00 0.00 2.69
2641 4355 7.394077 TGATTGAAAATAGATTCTGCCAGTTGA 59.606 33.333 0.00 0.00 0.00 3.18
2642 4356 7.541162 TGATTGAAAATAGATTCTGCCAGTTG 58.459 34.615 0.00 0.00 0.00 3.16
2643 4357 7.707624 TGATTGAAAATAGATTCTGCCAGTT 57.292 32.000 0.00 0.00 0.00 3.16
2644 4358 7.707624 TTGATTGAAAATAGATTCTGCCAGT 57.292 32.000 0.00 0.00 0.00 4.00
2645 4359 8.030692 TGTTTGATTGAAAATAGATTCTGCCAG 58.969 33.333 0.00 0.00 0.00 4.85
2646 4360 7.814107 GTGTTTGATTGAAAATAGATTCTGCCA 59.186 33.333 0.00 0.00 0.00 4.92
2647 4361 7.814107 TGTGTTTGATTGAAAATAGATTCTGCC 59.186 33.333 0.00 0.00 0.00 4.85
2648 4362 8.746922 TGTGTTTGATTGAAAATAGATTCTGC 57.253 30.769 0.00 0.00 0.00 4.26
2652 4366 9.480053 CCAGTTGTGTTTGATTGAAAATAGATT 57.520 29.630 0.00 0.00 0.00 2.40
2653 4367 8.859090 TCCAGTTGTGTTTGATTGAAAATAGAT 58.141 29.630 0.00 0.00 0.00 1.98
2654 4368 8.231692 TCCAGTTGTGTTTGATTGAAAATAGA 57.768 30.769 0.00 0.00 0.00 1.98
2655 4369 8.137437 ACTCCAGTTGTGTTTGATTGAAAATAG 58.863 33.333 0.00 0.00 0.00 1.73
2656 4370 8.006298 ACTCCAGTTGTGTTTGATTGAAAATA 57.994 30.769 0.00 0.00 0.00 1.40
2657 4371 6.877236 ACTCCAGTTGTGTTTGATTGAAAAT 58.123 32.000 0.00 0.00 0.00 1.82
2658 4372 6.279513 ACTCCAGTTGTGTTTGATTGAAAA 57.720 33.333 0.00 0.00 0.00 2.29
2659 4373 5.913137 ACTCCAGTTGTGTTTGATTGAAA 57.087 34.783 0.00 0.00 0.00 2.69
2660 4374 5.913137 AACTCCAGTTGTGTTTGATTGAA 57.087 34.783 0.00 0.00 36.80 2.69
2661 4375 5.913137 AAACTCCAGTTGTGTTTGATTGA 57.087 34.783 0.00 0.00 38.77 2.57
2662 4376 8.542132 CAATTAAACTCCAGTTGTGTTTGATTG 58.458 33.333 17.25 17.25 46.25 2.67
2663 4377 7.710475 CCAATTAAACTCCAGTTGTGTTTGATT 59.290 33.333 5.02 5.69 42.47 2.57
2664 4378 7.209475 CCAATTAAACTCCAGTTGTGTTTGAT 58.791 34.615 5.02 0.54 40.04 2.57
2665 4379 6.406400 CCCAATTAAACTCCAGTTGTGTTTGA 60.406 38.462 5.02 0.00 40.04 2.69
2666 4380 5.752955 CCCAATTAAACTCCAGTTGTGTTTG 59.247 40.000 5.02 0.00 40.04 2.93
2667 4381 5.683770 GCCCAATTAAACTCCAGTTGTGTTT 60.684 40.000 0.00 0.00 41.91 2.83
2668 4382 4.202212 GCCCAATTAAACTCCAGTTGTGTT 60.202 41.667 0.00 0.00 38.44 3.32
2669 4383 3.320826 GCCCAATTAAACTCCAGTTGTGT 59.679 43.478 0.00 0.00 38.44 3.72
2670 4384 3.306019 GGCCCAATTAAACTCCAGTTGTG 60.306 47.826 0.00 0.00 38.44 3.33
2671 4385 2.897326 GGCCCAATTAAACTCCAGTTGT 59.103 45.455 0.00 0.00 38.44 3.32
2672 4386 2.896685 TGGCCCAATTAAACTCCAGTTG 59.103 45.455 0.00 0.00 38.44 3.16
2673 4387 3.252554 TGGCCCAATTAAACTCCAGTT 57.747 42.857 0.00 0.00 40.50 3.16
2674 4388 2.897326 GTTGGCCCAATTAAACTCCAGT 59.103 45.455 0.00 0.00 0.00 4.00
2675 4389 2.896685 TGTTGGCCCAATTAAACTCCAG 59.103 45.455 0.00 0.00 0.00 3.86
2676 4390 2.964209 TGTTGGCCCAATTAAACTCCA 58.036 42.857 0.00 0.00 0.00 3.86
2677 4391 4.344359 TTTGTTGGCCCAATTAAACTCC 57.656 40.909 0.00 0.00 0.00 3.85
2678 4392 5.546526 TCATTTGTTGGCCCAATTAAACTC 58.453 37.500 0.00 0.00 0.00 3.01
2679 4393 5.559148 TCATTTGTTGGCCCAATTAAACT 57.441 34.783 0.00 0.00 0.00 2.66
2680 4394 6.429385 TCATTCATTTGTTGGCCCAATTAAAC 59.571 34.615 0.00 0.00 0.00 2.01
2681 4395 6.537355 TCATTCATTTGTTGGCCCAATTAAA 58.463 32.000 0.00 5.40 0.00 1.52
2682 4396 6.119240 TCATTCATTTGTTGGCCCAATTAA 57.881 33.333 0.00 0.00 0.00 1.40
2683 4397 5.752036 TCATTCATTTGTTGGCCCAATTA 57.248 34.783 0.00 0.00 0.00 1.40
2684 4398 4.637387 TCATTCATTTGTTGGCCCAATT 57.363 36.364 0.00 0.00 0.00 2.32
2685 4399 4.847990 ATCATTCATTTGTTGGCCCAAT 57.152 36.364 0.00 0.00 0.00 3.16
2686 4400 4.161942 CCTATCATTCATTTGTTGGCCCAA 59.838 41.667 0.00 0.00 0.00 4.12
2687 4401 3.705579 CCTATCATTCATTTGTTGGCCCA 59.294 43.478 0.00 0.00 0.00 5.36
2688 4402 3.070015 CCCTATCATTCATTTGTTGGCCC 59.930 47.826 0.00 0.00 0.00 5.80
2689 4403 3.070015 CCCCTATCATTCATTTGTTGGCC 59.930 47.826 0.00 0.00 0.00 5.36
2690 4404 3.960102 TCCCCTATCATTCATTTGTTGGC 59.040 43.478 0.00 0.00 0.00 4.52
2691 4405 4.586001 CCTCCCCTATCATTCATTTGTTGG 59.414 45.833 0.00 0.00 0.00 3.77
2692 4406 4.038402 GCCTCCCCTATCATTCATTTGTTG 59.962 45.833 0.00 0.00 0.00 3.33
2693 4407 4.218312 GCCTCCCCTATCATTCATTTGTT 58.782 43.478 0.00 0.00 0.00 2.83
2694 4408 3.748668 CGCCTCCCCTATCATTCATTTGT 60.749 47.826 0.00 0.00 0.00 2.83
2695 4409 2.816087 CGCCTCCCCTATCATTCATTTG 59.184 50.000 0.00 0.00 0.00 2.32
2696 4410 2.443255 ACGCCTCCCCTATCATTCATTT 59.557 45.455 0.00 0.00 0.00 2.32
2697 4411 2.057922 ACGCCTCCCCTATCATTCATT 58.942 47.619 0.00 0.00 0.00 2.57
2698 4412 1.734655 ACGCCTCCCCTATCATTCAT 58.265 50.000 0.00 0.00 0.00 2.57
2699 4413 1.507140 AACGCCTCCCCTATCATTCA 58.493 50.000 0.00 0.00 0.00 2.57
2700 4414 2.618709 CAAAACGCCTCCCCTATCATTC 59.381 50.000 0.00 0.00 0.00 2.67
2701 4415 2.654863 CAAAACGCCTCCCCTATCATT 58.345 47.619 0.00 0.00 0.00 2.57
2702 4416 1.133792 CCAAAACGCCTCCCCTATCAT 60.134 52.381 0.00 0.00 0.00 2.45
2703 4417 0.254747 CCAAAACGCCTCCCCTATCA 59.745 55.000 0.00 0.00 0.00 2.15
2704 4418 1.101635 GCCAAAACGCCTCCCCTATC 61.102 60.000 0.00 0.00 0.00 2.08
2705 4419 1.076995 GCCAAAACGCCTCCCCTAT 60.077 57.895 0.00 0.00 0.00 2.57
2706 4420 2.228480 AGCCAAAACGCCTCCCCTA 61.228 57.895 0.00 0.00 0.00 3.53
2707 4421 3.580319 AGCCAAAACGCCTCCCCT 61.580 61.111 0.00 0.00 0.00 4.79
2708 4422 3.373565 CAGCCAAAACGCCTCCCC 61.374 66.667 0.00 0.00 0.00 4.81
2709 4423 1.460273 TTTCAGCCAAAACGCCTCCC 61.460 55.000 0.00 0.00 0.00 4.30
2710 4424 0.387565 TTTTCAGCCAAAACGCCTCC 59.612 50.000 0.00 0.00 0.00 4.30
2711 4425 1.067060 ACTTTTCAGCCAAAACGCCTC 59.933 47.619 0.00 0.00 30.42 4.70
2712 4426 1.111277 ACTTTTCAGCCAAAACGCCT 58.889 45.000 0.00 0.00 30.42 5.52
2713 4427 2.785713 TACTTTTCAGCCAAAACGCC 57.214 45.000 0.00 0.00 30.42 5.68
2714 4428 4.742659 TGAATTACTTTTCAGCCAAAACGC 59.257 37.500 0.00 0.00 32.07 4.84
2715 4429 6.820470 TTGAATTACTTTTCAGCCAAAACG 57.180 33.333 0.00 0.00 36.97 3.60
2716 4430 9.489393 CTTTTTGAATTACTTTTCAGCCAAAAC 57.511 29.630 0.00 0.00 36.97 2.43
2717 4431 9.442047 TCTTTTTGAATTACTTTTCAGCCAAAA 57.558 25.926 0.00 0.00 36.97 2.44
2718 4432 9.442047 TTCTTTTTGAATTACTTTTCAGCCAAA 57.558 25.926 0.00 0.00 36.97 3.28
2719 4433 9.097257 CTTCTTTTTGAATTACTTTTCAGCCAA 57.903 29.630 0.00 0.00 36.97 4.52
2720 4434 8.257306 ACTTCTTTTTGAATTACTTTTCAGCCA 58.743 29.630 0.00 0.00 36.97 4.75
2721 4435 8.542953 CACTTCTTTTTGAATTACTTTTCAGCC 58.457 33.333 0.00 0.00 36.97 4.85
2722 4436 8.542953 CCACTTCTTTTTGAATTACTTTTCAGC 58.457 33.333 0.00 0.00 36.97 4.26
2723 4437 9.586435 ACCACTTCTTTTTGAATTACTTTTCAG 57.414 29.630 0.00 0.00 36.97 3.02
2734 4448 9.157104 GGAAACATTTTACCACTTCTTTTTGAA 57.843 29.630 0.00 0.00 0.00 2.69
2735 4449 8.314751 TGGAAACATTTTACCACTTCTTTTTGA 58.685 29.630 0.00 0.00 33.40 2.69
2736 4450 8.485976 TGGAAACATTTTACCACTTCTTTTTG 57.514 30.769 0.00 0.00 33.40 2.44
2737 4451 9.679661 ATTGGAAACATTTTACCACTTCTTTTT 57.320 25.926 0.00 0.00 42.32 1.94
2738 4452 9.679661 AATTGGAAACATTTTACCACTTCTTTT 57.320 25.926 0.00 0.00 42.32 2.27
2739 4453 9.679661 AAATTGGAAACATTTTACCACTTCTTT 57.320 25.926 0.00 0.00 40.91 2.52
2740 4454 9.679661 AAAATTGGAAACATTTTACCACTTCTT 57.320 25.926 0.00 0.00 41.61 2.52
2741 4455 9.325198 GAAAATTGGAAACATTTTACCACTTCT 57.675 29.630 0.00 0.00 41.61 2.85
2742 4456 9.325198 AGAAAATTGGAAACATTTTACCACTTC 57.675 29.630 0.00 0.00 41.61 3.01
2743 4457 9.679661 AAGAAAATTGGAAACATTTTACCACTT 57.320 25.926 0.00 0.00 41.61 3.16
2744 4458 9.679661 AAAGAAAATTGGAAACATTTTACCACT 57.320 25.926 0.00 0.00 41.61 4.00
2769 4483 6.843208 TGACACTAACACGAACATTCAAAAA 58.157 32.000 0.00 0.00 0.00 1.94
2770 4484 6.424176 TGACACTAACACGAACATTCAAAA 57.576 33.333 0.00 0.00 0.00 2.44
2771 4485 6.612247 ATGACACTAACACGAACATTCAAA 57.388 33.333 0.00 0.00 0.00 2.69
2772 4486 7.570507 GCTTATGACACTAACACGAACATTCAA 60.571 37.037 0.00 0.00 0.00 2.69
2773 4487 6.128661 GCTTATGACACTAACACGAACATTCA 60.129 38.462 0.00 0.00 0.00 2.57
2774 4488 6.241385 GCTTATGACACTAACACGAACATTC 58.759 40.000 0.00 0.00 0.00 2.67
2775 4489 5.163992 CGCTTATGACACTAACACGAACATT 60.164 40.000 0.00 0.00 0.00 2.71
2776 4490 4.326278 CGCTTATGACACTAACACGAACAT 59.674 41.667 0.00 0.00 0.00 2.71
2777 4491 3.671459 CGCTTATGACACTAACACGAACA 59.329 43.478 0.00 0.00 0.00 3.18
2778 4492 3.671928 ACGCTTATGACACTAACACGAAC 59.328 43.478 0.00 0.00 0.00 3.95
2779 4493 3.671459 CACGCTTATGACACTAACACGAA 59.329 43.478 0.00 0.00 0.00 3.85
2780 4494 3.239254 CACGCTTATGACACTAACACGA 58.761 45.455 0.00 0.00 0.00 4.35
2781 4495 2.222508 GCACGCTTATGACACTAACACG 60.223 50.000 0.00 0.00 0.00 4.49
2782 4496 2.993899 AGCACGCTTATGACACTAACAC 59.006 45.455 0.00 0.00 0.00 3.32
2783 4497 2.993220 CAGCACGCTTATGACACTAACA 59.007 45.455 0.00 0.00 0.00 2.41
2784 4498 3.250744 TCAGCACGCTTATGACACTAAC 58.749 45.455 0.00 0.00 0.00 2.34
2785 4499 3.056821 ACTCAGCACGCTTATGACACTAA 60.057 43.478 0.00 0.00 0.00 2.24
2786 4500 2.492088 ACTCAGCACGCTTATGACACTA 59.508 45.455 0.00 0.00 0.00 2.74
2787 4501 1.273606 ACTCAGCACGCTTATGACACT 59.726 47.619 0.00 0.00 0.00 3.55
2788 4502 1.391485 CACTCAGCACGCTTATGACAC 59.609 52.381 0.00 0.00 0.00 3.67
2789 4503 1.000843 ACACTCAGCACGCTTATGACA 59.999 47.619 0.00 0.00 0.00 3.58
2790 4504 1.714794 ACACTCAGCACGCTTATGAC 58.285 50.000 0.00 0.00 0.00 3.06
2791 4505 2.455674 AACACTCAGCACGCTTATGA 57.544 45.000 0.00 0.00 0.00 2.15
2792 4506 2.480037 TGAAACACTCAGCACGCTTATG 59.520 45.455 0.00 0.00 0.00 1.90
2793 4507 2.766313 TGAAACACTCAGCACGCTTAT 58.234 42.857 0.00 0.00 0.00 1.73
2794 4508 2.232756 TGAAACACTCAGCACGCTTA 57.767 45.000 0.00 0.00 0.00 3.09
2795 4509 1.532868 GATGAAACACTCAGCACGCTT 59.467 47.619 0.00 0.00 40.36 4.68
2796 4510 1.151668 GATGAAACACTCAGCACGCT 58.848 50.000 0.00 0.00 40.36 5.07
2797 4511 0.179240 CGATGAAACACTCAGCACGC 60.179 55.000 0.00 0.00 40.69 5.34
2798 4512 0.439985 CCGATGAAACACTCAGCACG 59.560 55.000 0.00 0.00 40.69 5.34
2799 4513 1.195448 CACCGATGAAACACTCAGCAC 59.805 52.381 0.00 0.00 40.69 4.40
2800 4514 1.069978 TCACCGATGAAACACTCAGCA 59.930 47.619 0.00 0.00 40.69 4.41
2801 4515 1.795768 TCACCGATGAAACACTCAGC 58.204 50.000 0.00 0.00 37.52 4.26
2811 4525 9.593134 CCCAAATTTATTTATTTTCACCGATGA 57.407 29.630 0.00 0.00 0.00 2.92
2812 4526 8.825745 CCCCAAATTTATTTATTTTCACCGATG 58.174 33.333 0.00 0.00 0.00 3.84
2813 4527 7.990314 CCCCCAAATTTATTTATTTTCACCGAT 59.010 33.333 0.00 0.00 0.00 4.18
2814 4528 7.038231 ACCCCCAAATTTATTTATTTTCACCGA 60.038 33.333 0.00 0.00 0.00 4.69
2815 4529 7.065204 CACCCCCAAATTTATTTATTTTCACCG 59.935 37.037 0.00 0.00 0.00 4.94
2816 4530 8.103935 TCACCCCCAAATTTATTTATTTTCACC 58.896 33.333 0.00 0.00 0.00 4.02
2817 4531 8.941977 GTCACCCCCAAATTTATTTATTTTCAC 58.058 33.333 0.00 0.00 0.00 3.18
2818 4532 8.660435 TGTCACCCCCAAATTTATTTATTTTCA 58.340 29.630 0.00 0.00 0.00 2.69
2819 4533 9.679661 ATGTCACCCCCAAATTTATTTATTTTC 57.320 29.630 0.00 0.00 0.00 2.29
2825 4539 9.868160 TTAAAAATGTCACCCCCAAATTTATTT 57.132 25.926 0.00 0.00 0.00 1.40
2826 4540 9.513906 CTTAAAAATGTCACCCCCAAATTTATT 57.486 29.630 0.00 0.00 0.00 1.40
2827 4541 8.106462 CCTTAAAAATGTCACCCCCAAATTTAT 58.894 33.333 0.00 0.00 0.00 1.40
2828 4542 7.454225 CCTTAAAAATGTCACCCCCAAATTTA 58.546 34.615 0.00 0.00 0.00 1.40
2829 4543 6.303054 CCTTAAAAATGTCACCCCCAAATTT 58.697 36.000 0.00 0.00 0.00 1.82
2830 4544 5.222027 CCCTTAAAAATGTCACCCCCAAATT 60.222 40.000 0.00 0.00 0.00 1.82
2831 4545 4.288366 CCCTTAAAAATGTCACCCCCAAAT 59.712 41.667 0.00 0.00 0.00 2.32
2832 4546 3.648545 CCCTTAAAAATGTCACCCCCAAA 59.351 43.478 0.00 0.00 0.00 3.28
2833 4547 3.243724 CCCTTAAAAATGTCACCCCCAA 58.756 45.455 0.00 0.00 0.00 4.12
2834 4548 2.180308 ACCCTTAAAAATGTCACCCCCA 59.820 45.455 0.00 0.00 0.00 4.96
2835 4549 2.897350 ACCCTTAAAAATGTCACCCCC 58.103 47.619 0.00 0.00 0.00 5.40
2836 4550 4.833938 TGTTACCCTTAAAAATGTCACCCC 59.166 41.667 0.00 0.00 0.00 4.95
2837 4551 6.599356 ATGTTACCCTTAAAAATGTCACCC 57.401 37.500 0.00 0.00 0.00 4.61
2838 4552 7.386573 CCAAATGTTACCCTTAAAAATGTCACC 59.613 37.037 0.00 0.00 0.00 4.02
2839 4553 7.929245 ACCAAATGTTACCCTTAAAAATGTCAC 59.071 33.333 0.00 0.00 0.00 3.67
2840 4554 7.928706 CACCAAATGTTACCCTTAAAAATGTCA 59.071 33.333 0.00 0.00 0.00 3.58
2841 4555 7.929245 ACACCAAATGTTACCCTTAAAAATGTC 59.071 33.333 0.00 0.00 38.98 3.06
2842 4556 7.797062 ACACCAAATGTTACCCTTAAAAATGT 58.203 30.769 0.00 0.00 38.98 2.71
2876 4590 5.850557 TGAGCATTTTGGTCTGAGAAAAA 57.149 34.783 8.04 0.00 44.58 1.94
2877 4591 5.360714 AGTTGAGCATTTTGGTCTGAGAAAA 59.639 36.000 8.04 0.00 44.58 2.29
2878 4592 4.889409 AGTTGAGCATTTTGGTCTGAGAAA 59.111 37.500 8.04 0.00 44.58 2.52
2879 4593 4.464008 AGTTGAGCATTTTGGTCTGAGAA 58.536 39.130 8.04 0.00 44.58 2.87
2880 4594 4.090761 AGTTGAGCATTTTGGTCTGAGA 57.909 40.909 8.04 0.00 44.58 3.27
2881 4595 4.843220 AAGTTGAGCATTTTGGTCTGAG 57.157 40.909 8.04 0.00 44.58 3.35
2882 4596 5.596836 AAAAGTTGAGCATTTTGGTCTGA 57.403 34.783 8.04 0.00 44.58 3.27
2919 4633 2.162408 GTCACTTCCAAATGCTACCTGC 59.838 50.000 0.00 0.00 43.25 4.85
2920 4634 3.679389 AGTCACTTCCAAATGCTACCTG 58.321 45.455 0.00 0.00 0.00 4.00
2921 4635 5.189736 TCATAGTCACTTCCAAATGCTACCT 59.810 40.000 0.00 0.00 0.00 3.08
2922 4636 5.428253 TCATAGTCACTTCCAAATGCTACC 58.572 41.667 0.00 0.00 0.00 3.18
2923 4637 6.985188 TTCATAGTCACTTCCAAATGCTAC 57.015 37.500 0.00 0.00 0.00 3.58
2924 4638 8.264347 TGTATTCATAGTCACTTCCAAATGCTA 58.736 33.333 0.00 0.00 0.00 3.49
2925 4639 7.066284 GTGTATTCATAGTCACTTCCAAATGCT 59.934 37.037 0.00 0.00 0.00 3.79
2926 4640 7.148255 TGTGTATTCATAGTCACTTCCAAATGC 60.148 37.037 0.00 0.00 0.00 3.56
2927 4641 8.267620 TGTGTATTCATAGTCACTTCCAAATG 57.732 34.615 0.00 0.00 0.00 2.32
2928 4642 8.862325 TTGTGTATTCATAGTCACTTCCAAAT 57.138 30.769 0.00 0.00 0.00 2.32
2929 4643 8.684386 TTTGTGTATTCATAGTCACTTCCAAA 57.316 30.769 0.00 0.00 0.00 3.28
2930 4644 8.684386 TTTTGTGTATTCATAGTCACTTCCAA 57.316 30.769 0.00 0.00 0.00 3.53
2931 4645 8.684386 TTTTTGTGTATTCATAGTCACTTCCA 57.316 30.769 0.00 0.00 0.00 3.53
2975 4689 9.374960 GCGTGCAAAATTGATTTTTAAAATGTA 57.625 25.926 7.72 0.00 37.86 2.29
2976 4690 7.912250 TGCGTGCAAAATTGATTTTTAAAATGT 59.088 25.926 7.72 0.00 37.86 2.71
2977 4691 8.266420 TGCGTGCAAAATTGATTTTTAAAATG 57.734 26.923 7.72 0.00 37.86 2.32
2978 4692 8.341173 TCTGCGTGCAAAATTGATTTTTAAAAT 58.659 25.926 2.23 2.23 37.86 1.82
2979 4693 7.688372 TCTGCGTGCAAAATTGATTTTTAAAA 58.312 26.923 0.00 0.00 37.86 1.52
2980 4694 7.239166 TCTGCGTGCAAAATTGATTTTTAAA 57.761 28.000 0.00 0.00 37.86 1.52
2981 4695 6.834959 TCTGCGTGCAAAATTGATTTTTAA 57.165 29.167 0.00 0.00 37.86 1.52
2982 4696 6.563753 GCTTCTGCGTGCAAAATTGATTTTTA 60.564 34.615 0.00 0.00 37.86 1.52
2983 4697 5.731599 TTCTGCGTGCAAAATTGATTTTT 57.268 30.435 0.00 0.00 37.86 1.94
2984 4698 4.318974 GCTTCTGCGTGCAAAATTGATTTT 60.319 37.500 0.00 0.00 40.37 1.82
2985 4699 3.184986 GCTTCTGCGTGCAAAATTGATTT 59.815 39.130 0.00 0.00 0.00 2.17
2986 4700 2.733026 GCTTCTGCGTGCAAAATTGATT 59.267 40.909 0.00 0.00 0.00 2.57
2987 4701 2.029649 AGCTTCTGCGTGCAAAATTGAT 60.030 40.909 0.00 0.00 45.42 2.57
2988 4702 1.337703 AGCTTCTGCGTGCAAAATTGA 59.662 42.857 0.00 0.00 45.42 2.57
2989 4703 1.717645 GAGCTTCTGCGTGCAAAATTG 59.282 47.619 0.00 0.00 45.42 2.32
2990 4704 1.610522 AGAGCTTCTGCGTGCAAAATT 59.389 42.857 0.00 0.00 45.42 1.82
2991 4705 1.198637 GAGAGCTTCTGCGTGCAAAAT 59.801 47.619 0.00 0.00 45.42 1.82
2992 4706 0.588252 GAGAGCTTCTGCGTGCAAAA 59.412 50.000 0.00 0.00 45.42 2.44
2993 4707 1.230635 GGAGAGCTTCTGCGTGCAAA 61.231 55.000 0.00 0.00 45.42 3.68
2994 4708 1.669115 GGAGAGCTTCTGCGTGCAA 60.669 57.895 0.00 0.00 45.42 4.08
2995 4709 2.047844 GGAGAGCTTCTGCGTGCA 60.048 61.111 0.00 0.00 45.42 4.57
2996 4710 2.817396 GGGAGAGCTTCTGCGTGC 60.817 66.667 0.00 0.00 45.42 5.34
2997 4711 2.507992 CGGGAGAGCTTCTGCGTG 60.508 66.667 0.00 0.00 45.42 5.34
2998 4712 3.764466 CCGGGAGAGCTTCTGCGT 61.764 66.667 0.00 0.00 45.42 5.24
2999 4713 4.521062 CCCGGGAGAGCTTCTGCG 62.521 72.222 18.48 0.00 45.42 5.18
3000 4714 3.077556 TCCCGGGAGAGCTTCTGC 61.078 66.667 22.63 0.00 40.05 4.26
3001 4715 3.215245 CTCCCGGGAGAGCTTCTG 58.785 66.667 42.70 16.46 44.53 3.02
3009 4723 1.754234 CCAATTTGGCTCCCGGGAG 60.754 63.158 41.29 41.29 44.56 4.30
3010 4724 1.580066 ATCCAATTTGGCTCCCGGGA 61.580 55.000 25.06 25.06 37.47 5.14
3011 4725 0.184933 TATCCAATTTGGCTCCCGGG 59.815 55.000 16.85 16.85 37.47 5.73
3012 4726 2.162681 GATATCCAATTTGGCTCCCGG 58.837 52.381 10.76 0.00 37.47 5.73
3013 4727 2.162681 GGATATCCAATTTGGCTCCCG 58.837 52.381 17.34 0.00 37.47 5.14
3014 4728 2.162681 CGGATATCCAATTTGGCTCCC 58.837 52.381 21.70 7.94 37.47 4.30
3015 4729 1.541588 GCGGATATCCAATTTGGCTCC 59.458 52.381 21.70 13.99 37.47 4.70
3016 4730 1.197721 CGCGGATATCCAATTTGGCTC 59.802 52.381 21.70 7.15 37.47 4.70
3017 4731 1.202758 TCGCGGATATCCAATTTGGCT 60.203 47.619 21.70 3.66 37.47 4.75
3018 4732 1.069227 GTCGCGGATATCCAATTTGGC 60.069 52.381 21.70 13.75 37.47 4.52
3019 4733 2.217750 TGTCGCGGATATCCAATTTGG 58.782 47.619 21.70 9.28 39.43 3.28
3020 4734 3.961477 TTGTCGCGGATATCCAATTTG 57.039 42.857 21.70 5.93 35.14 2.32
3021 4735 4.151689 CGTATTGTCGCGGATATCCAATTT 59.848 41.667 21.70 2.22 35.14 1.82
3022 4736 3.678072 CGTATTGTCGCGGATATCCAATT 59.322 43.478 21.70 1.71 35.14 2.32
3023 4737 3.057104 TCGTATTGTCGCGGATATCCAAT 60.057 43.478 21.70 14.48 35.14 3.16
3024 4738 2.293955 TCGTATTGTCGCGGATATCCAA 59.706 45.455 21.70 8.16 35.14 3.53
3025 4739 1.881324 TCGTATTGTCGCGGATATCCA 59.119 47.619 21.70 0.90 35.14 3.41
3026 4740 2.516923 CTCGTATTGTCGCGGATATCC 58.483 52.381 12.14 12.14 0.00 2.59
3027 4741 1.912110 GCTCGTATTGTCGCGGATATC 59.088 52.381 6.13 0.00 0.00 1.63
3028 4742 1.540267 AGCTCGTATTGTCGCGGATAT 59.460 47.619 6.13 0.00 0.00 1.63
3029 4743 0.949397 AGCTCGTATTGTCGCGGATA 59.051 50.000 6.13 0.00 0.00 2.59
3030 4744 0.595053 CAGCTCGTATTGTCGCGGAT 60.595 55.000 6.13 0.58 0.00 4.18
3031 4745 1.226575 CAGCTCGTATTGTCGCGGA 60.227 57.895 6.13 0.00 0.00 5.54
3032 4746 2.230940 CCAGCTCGTATTGTCGCGG 61.231 63.158 6.13 0.00 0.00 6.46
3033 4747 2.860628 GCCAGCTCGTATTGTCGCG 61.861 63.158 0.00 0.00 0.00 5.87
3034 4748 1.756375 CTGCCAGCTCGTATTGTCGC 61.756 60.000 0.00 0.00 0.00 5.19
3035 4749 0.179137 TCTGCCAGCTCGTATTGTCG 60.179 55.000 0.00 0.00 0.00 4.35
3036 4750 3.741029 TCTGCCAGCTCGTATTGTC 57.259 52.632 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.