Multiple sequence alignment - TraesCS2B01G425700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G425700 chr2B 100.000 4581 0 0 1 4581 611314975 611310395 0.000000e+00 8460.0
1 TraesCS2B01G425700 chr2B 80.507 631 111 4 2731 3358 612065992 612066613 1.490000e-129 473.0
2 TraesCS2B01G425700 chr2B 80.952 357 66 2 3005 3359 609762982 609762626 9.700000e-72 281.0
3 TraesCS2B01G425700 chr2B 87.234 235 26 3 638 871 134370082 134369851 9.770000e-67 265.0
4 TraesCS2B01G425700 chr2B 89.697 165 15 2 145 307 134370566 134370402 4.640000e-50 209.0
5 TraesCS2B01G425700 chr2B 86.792 159 21 0 2451 2609 612065778 612065936 1.310000e-40 178.0
6 TraesCS2B01G425700 chr2B 86.164 159 22 0 2451 2609 612011860 612012018 6.090000e-39 172.0
7 TraesCS2B01G425700 chr2B 89.474 133 13 1 1104 1235 612064709 612064841 2.830000e-37 167.0
8 TraesCS2B01G425700 chr2B 87.879 132 15 1 1104 1234 612010791 612010922 2.210000e-33 154.0
9 TraesCS2B01G425700 chr2D 93.013 2433 91 25 1031 3447 519341574 519339205 0.000000e+00 3478.0
10 TraesCS2B01G425700 chr2D 84.117 1467 138 50 2683 4100 519900648 519899228 0.000000e+00 1330.0
11 TraesCS2B01G425700 chr2D 87.367 752 64 20 1950 2696 519901519 519900794 0.000000e+00 833.0
12 TraesCS2B01G425700 chr2D 80.666 631 110 3 2731 3358 520040574 520041195 3.210000e-131 479.0
13 TraesCS2B01G425700 chr2D 90.449 356 25 3 3597 3946 519307071 519306719 1.160000e-125 460.0
14 TraesCS2B01G425700 chr2D 81.742 356 64 1 3005 3359 518014426 518014071 3.470000e-76 296.0
15 TraesCS2B01G425700 chr2D 93.125 160 9 2 1104 1263 519902750 519902593 2.760000e-57 233.0
16 TraesCS2B01G425700 chr2D 91.279 172 11 4 1474 1644 519902581 519902413 9.910000e-57 231.0
17 TraesCS2B01G425700 chr2D 87.975 158 19 0 3437 3594 519307383 519307226 2.180000e-43 187.0
18 TraesCS2B01G425700 chr2D 87.421 159 20 0 2451 2609 520040360 520040518 2.810000e-42 183.0
19 TraesCS2B01G425700 chr2D 89.147 129 11 3 881 1008 519341689 519341563 1.710000e-34 158.0
20 TraesCS2B01G425700 chr2D 89.076 119 7 5 660 776 201954742 201954628 4.780000e-30 143.0
21 TraesCS2B01G425700 chr2D 91.358 81 6 1 1493 1573 519902521 519902442 4.850000e-20 110.0
22 TraesCS2B01G425700 chr7B 98.848 868 9 1 1 868 136563616 136564482 0.000000e+00 1546.0
23 TraesCS2B01G425700 chr7B 93.822 437 25 2 4146 4581 640462283 640462718 0.000000e+00 656.0
24 TraesCS2B01G425700 chr7B 92.677 437 31 1 4146 4581 568008297 568008733 3.010000e-176 628.0
25 TraesCS2B01G425700 chr2A 95.972 869 30 3 1 868 402640899 402640035 0.000000e+00 1406.0
26 TraesCS2B01G425700 chr2A 95.857 869 30 4 1 868 404559913 404559050 0.000000e+00 1400.0
27 TraesCS2B01G425700 chr2A 76.519 609 126 11 2751 3355 661669763 661669168 2.660000e-82 316.0
28 TraesCS2B01G425700 chr6B 94.104 424 23 2 4159 4581 716629039 716629461 1.070000e-180 643.0
29 TraesCS2B01G425700 chr4B 85.246 427 60 3 4157 4581 106959417 106959842 1.960000e-118 436.0
30 TraesCS2B01G425700 chr4B 83.491 424 59 5 4159 4581 139390793 139390380 7.190000e-103 385.0
31 TraesCS2B01G425700 chr4B 91.038 212 11 5 667 872 173959547 173959338 3.490000e-71 279.0
32 TraesCS2B01G425700 chr4B 90.419 167 9 6 144 306 173960054 173959891 3.590000e-51 213.0
33 TraesCS2B01G425700 chr4D 90.968 310 23 5 1 307 319323208 319322901 3.300000e-111 412.0
34 TraesCS2B01G425700 chr4D 93.750 176 8 3 667 841 319322527 319322354 1.260000e-65 261.0
35 TraesCS2B01G425700 chr4D 97.368 38 1 0 360 397 319322945 319322908 1.060000e-06 65.8
36 TraesCS2B01G425700 chr5D 90.645 310 24 5 1 307 119675084 119674777 1.530000e-109 407.0
37 TraesCS2B01G425700 chr5D 94.318 176 7 3 667 841 119674403 119674230 2.720000e-67 267.0
38 TraesCS2B01G425700 chr5D 87.069 232 25 4 638 868 64537570 64537797 1.640000e-64 257.0
39 TraesCS2B01G425700 chr5D 86.471 170 16 4 145 307 64537074 64537243 3.640000e-41 180.0
40 TraesCS2B01G425700 chr5D 91.262 103 9 0 1 103 64536973 64537075 1.720000e-29 141.0
41 TraesCS2B01G425700 chr5D 97.368 38 1 0 360 397 119674821 119674784 1.060000e-06 65.8
42 TraesCS2B01G425700 chr5D 97.297 37 1 0 361 397 64537200 64537236 3.830000e-06 63.9
43 TraesCS2B01G425700 chrUn 94.064 219 13 0 4147 4365 337091527 337091309 2.640000e-87 333.0
44 TraesCS2B01G425700 chrUn 94.686 207 11 0 4147 4353 475845718 475845924 5.720000e-84 322.0
45 TraesCS2B01G425700 chrUn 96.970 33 1 0 1807 1839 287635278 287635310 6.400000e-04 56.5
46 TraesCS2B01G425700 chrUn 96.970 33 1 0 1807 1839 292970736 292970704 6.400000e-04 56.5
47 TraesCS2B01G425700 chrUn 96.970 33 1 0 1807 1839 338766159 338766127 6.400000e-04 56.5
48 TraesCS2B01G425700 chr5B 86.842 76 6 3 805 879 530639935 530640007 1.060000e-11 82.4
49 TraesCS2B01G425700 chr3A 89.796 49 4 1 2302 2349 547324870 547324822 1.380000e-05 62.1
50 TraesCS2B01G425700 chr7D 100.000 29 0 0 1805 1833 14547276 14547304 2.000000e-03 54.7
51 TraesCS2B01G425700 chr4A 100.000 29 0 0 1805 1833 722414058 722414030 2.000000e-03 54.7
52 TraesCS2B01G425700 chr6D 100.000 28 0 0 1804 1831 157586893 157586920 8.000000e-03 52.8
53 TraesCS2B01G425700 chr6A 100.000 28 0 0 1804 1831 214565910 214565883 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G425700 chr2B 611310395 611314975 4580 True 8460.000000 8460 100.000000 1 4581 1 chr2B.!!$R2 4580
1 TraesCS2B01G425700 chr2B 612064709 612066613 1904 False 272.666667 473 85.591000 1104 3358 3 chr2B.!!$F2 2254
2 TraesCS2B01G425700 chr2B 134369851 134370566 715 True 237.000000 265 88.465500 145 871 2 chr2B.!!$R3 726
3 TraesCS2B01G425700 chr2D 519339205 519341689 2484 True 1818.000000 3478 91.080000 881 3447 2 chr2D.!!$R4 2566
4 TraesCS2B01G425700 chr2D 519899228 519902750 3522 True 547.400000 1330 89.449200 1104 4100 5 chr2D.!!$R5 2996
5 TraesCS2B01G425700 chr2D 520040360 520041195 835 False 331.000000 479 84.043500 2451 3358 2 chr2D.!!$F1 907
6 TraesCS2B01G425700 chr2D 519306719 519307383 664 True 323.500000 460 89.212000 3437 3946 2 chr2D.!!$R3 509
7 TraesCS2B01G425700 chr7B 136563616 136564482 866 False 1546.000000 1546 98.848000 1 868 1 chr7B.!!$F1 867
8 TraesCS2B01G425700 chr2A 402640035 402640899 864 True 1406.000000 1406 95.972000 1 868 1 chr2A.!!$R1 867
9 TraesCS2B01G425700 chr2A 404559050 404559913 863 True 1400.000000 1400 95.857000 1 868 1 chr2A.!!$R2 867
10 TraesCS2B01G425700 chr2A 661669168 661669763 595 True 316.000000 316 76.519000 2751 3355 1 chr2A.!!$R3 604
11 TraesCS2B01G425700 chr4B 173959338 173960054 716 True 246.000000 279 90.728500 144 872 2 chr4B.!!$R2 728
12 TraesCS2B01G425700 chr4D 319322354 319323208 854 True 246.266667 412 94.028667 1 841 3 chr4D.!!$R1 840
13 TraesCS2B01G425700 chr5D 119674230 119675084 854 True 246.600000 407 94.110333 1 841 3 chr5D.!!$R1 840

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
995 1136 0.236187 TTCGTGACGCCAAATTTCCG 59.764 50.0 0.00 6.29 0.00 4.30 F
1008 1149 0.038166 ATTTCCGGCAGCTTCCTTCA 59.962 50.0 0.00 0.00 0.00 3.02 F
1163 1304 0.103755 CGCAATAGCAGCAGAGAGGA 59.896 55.0 0.00 0.00 42.27 3.71 F
1418 1660 0.377203 CGCGGCAGGTAAGAAATTCC 59.623 55.0 0.00 0.00 0.00 3.01 F
2629 3599 0.679505 TGAGCGTGGCTACAACTCTT 59.320 50.0 17.46 0.00 39.88 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2493 3449 0.698238 AAACCTGCAGTGGCCAGATA 59.302 50.000 5.11 0.0 40.13 1.98 R
2556 3512 3.135348 CCCTGGTGCATCTGAAGAGATAA 59.865 47.826 5.27 0.0 36.75 1.75 R
3116 4248 2.806608 AAATCAAGCAGCACCACTTG 57.193 45.000 0.00 0.0 43.73 3.16 R
3277 4410 1.741706 CCTGACGCTTGCATCTCAAAT 59.258 47.619 0.00 0.0 33.65 2.32 R
4127 5482 0.034616 CGGCATCCTCCAAGATCTCC 59.965 60.000 0.00 0.0 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
187 189 1.691219 GCAGATGGGGAGGGTTCAA 59.309 57.895 0.00 0.00 0.00 2.69
401 496 3.156293 CCATTGTTGGTCCAGACATCAA 58.844 45.455 7.45 2.74 38.30 2.57
829 970 0.540365 AGGGTGGGACGACGTAAGAA 60.540 55.000 0.00 0.00 43.62 2.52
902 1043 2.033372 TGTACAAGTTGGAGTCGGACA 58.967 47.619 11.27 0.00 0.00 4.02
913 1054 1.070786 GTCGGACAAGCACCTTGGA 59.929 57.895 2.62 0.00 44.81 3.53
914 1055 0.321653 GTCGGACAAGCACCTTGGAT 60.322 55.000 2.62 0.00 44.81 3.41
923 1064 0.890683 GCACCTTGGATCTGTTTGGG 59.109 55.000 0.00 0.00 0.00 4.12
930 1071 7.006509 CACCTTGGATCTGTTTGGGATAATAT 58.993 38.462 0.00 0.00 0.00 1.28
931 1072 8.163408 CACCTTGGATCTGTTTGGGATAATATA 58.837 37.037 0.00 0.00 0.00 0.86
932 1073 8.732854 ACCTTGGATCTGTTTGGGATAATATAA 58.267 33.333 0.00 0.00 0.00 0.98
933 1074 9.236006 CCTTGGATCTGTTTGGGATAATATAAG 57.764 37.037 0.00 0.00 0.00 1.73
934 1075 8.635765 TTGGATCTGTTTGGGATAATATAAGC 57.364 34.615 0.00 0.00 0.00 3.09
935 1076 6.878923 TGGATCTGTTTGGGATAATATAAGCG 59.121 38.462 0.00 0.00 0.00 4.68
936 1077 6.879458 GGATCTGTTTGGGATAATATAAGCGT 59.121 38.462 0.00 0.00 0.00 5.07
937 1078 7.064728 GGATCTGTTTGGGATAATATAAGCGTC 59.935 40.741 0.00 0.00 0.00 5.19
938 1079 6.822442 TCTGTTTGGGATAATATAAGCGTCA 58.178 36.000 0.00 0.00 0.00 4.35
939 1080 7.276658 TCTGTTTGGGATAATATAAGCGTCAA 58.723 34.615 0.00 0.00 0.00 3.18
940 1081 7.936847 TCTGTTTGGGATAATATAAGCGTCAAT 59.063 33.333 0.00 0.00 0.00 2.57
941 1082 8.458573 TGTTTGGGATAATATAAGCGTCAATT 57.541 30.769 0.00 0.00 0.00 2.32
942 1083 8.349245 TGTTTGGGATAATATAAGCGTCAATTG 58.651 33.333 0.00 0.00 0.00 2.32
951 1092 2.096406 CGTCAATTGCCTCGTGCG 59.904 61.111 0.00 0.00 45.60 5.34
980 1121 7.815746 GTTTGGATTGAAACCAACGTTTTCGT 61.816 38.462 6.40 0.00 45.38 3.85
981 1122 9.690021 GTTTGGATTGAAACCAACGTTTTCGTG 62.690 40.741 6.40 0.00 45.38 4.35
995 1136 0.236187 TTCGTGACGCCAAATTTCCG 59.764 50.000 0.00 6.29 0.00 4.30
1008 1149 0.038166 ATTTCCGGCAGCTTCCTTCA 59.962 50.000 0.00 0.00 0.00 3.02
1009 1150 0.606401 TTTCCGGCAGCTTCCTTCAG 60.606 55.000 0.00 0.00 0.00 3.02
1010 1151 1.768684 TTCCGGCAGCTTCCTTCAGT 61.769 55.000 0.00 0.00 0.00 3.41
1011 1152 1.302832 CCGGCAGCTTCCTTCAGTT 60.303 57.895 0.00 0.00 0.00 3.16
1012 1153 0.890996 CCGGCAGCTTCCTTCAGTTT 60.891 55.000 0.00 0.00 0.00 2.66
1013 1154 0.954452 CGGCAGCTTCCTTCAGTTTT 59.046 50.000 0.00 0.00 0.00 2.43
1014 1155 1.068954 CGGCAGCTTCCTTCAGTTTTC 60.069 52.381 0.00 0.00 0.00 2.29
1015 1156 1.068954 GGCAGCTTCCTTCAGTTTTCG 60.069 52.381 0.00 0.00 0.00 3.46
1016 1157 1.664302 GCAGCTTCCTTCAGTTTTCGC 60.664 52.381 0.00 0.00 0.00 4.70
1017 1158 0.868406 AGCTTCCTTCAGTTTTCGCG 59.132 50.000 0.00 0.00 0.00 5.87
1018 1159 0.726118 GCTTCCTTCAGTTTTCGCGC 60.726 55.000 0.00 0.00 0.00 6.86
1019 1160 0.110192 CTTCCTTCAGTTTTCGCGCC 60.110 55.000 0.00 0.00 0.00 6.53
1020 1161 1.512156 TTCCTTCAGTTTTCGCGCCC 61.512 55.000 0.00 0.00 0.00 6.13
1021 1162 2.258013 CCTTCAGTTTTCGCGCCCA 61.258 57.895 0.00 0.00 0.00 5.36
1022 1163 1.082104 CTTCAGTTTTCGCGCCCAC 60.082 57.895 0.00 0.00 0.00 4.61
1023 1164 2.458006 CTTCAGTTTTCGCGCCCACC 62.458 60.000 0.00 0.00 0.00 4.61
1024 1165 4.383602 CAGTTTTCGCGCCCACCG 62.384 66.667 0.00 0.00 40.75 4.94
1025 1166 4.922026 AGTTTTCGCGCCCACCGT 62.922 61.111 0.00 0.00 39.71 4.83
1039 1180 4.473520 CCGTGGCGGCAGATTCCT 62.474 66.667 13.91 0.00 41.17 3.36
1040 1181 2.436646 CGTGGCGGCAGATTCCTT 60.437 61.111 13.91 0.00 0.00 3.36
1041 1182 2.753966 CGTGGCGGCAGATTCCTTG 61.754 63.158 13.91 0.00 0.00 3.61
1045 1186 2.045045 CGGCAGATTCCTTGGCCA 60.045 61.111 0.00 0.00 46.75 5.36
1082 1223 4.096003 ATTGACGGGGCGGACTGG 62.096 66.667 0.00 0.00 0.00 4.00
1162 1303 0.179089 ACGCAATAGCAGCAGAGAGG 60.179 55.000 0.00 0.00 42.27 3.69
1163 1304 0.103755 CGCAATAGCAGCAGAGAGGA 59.896 55.000 0.00 0.00 42.27 3.71
1164 1305 1.472201 CGCAATAGCAGCAGAGAGGAA 60.472 52.381 0.00 0.00 42.27 3.36
1165 1306 2.636830 GCAATAGCAGCAGAGAGGAAA 58.363 47.619 0.00 0.00 41.58 3.13
1166 1307 2.354199 GCAATAGCAGCAGAGAGGAAAC 59.646 50.000 0.00 0.00 41.58 2.78
1167 1308 2.941720 CAATAGCAGCAGAGAGGAAACC 59.058 50.000 0.00 0.00 0.00 3.27
1168 1309 0.905357 TAGCAGCAGAGAGGAAACCC 59.095 55.000 0.00 0.00 0.00 4.11
1169 1310 0.839853 AGCAGCAGAGAGGAAACCCT 60.840 55.000 0.00 0.00 36.57 4.34
1170 1311 0.905357 GCAGCAGAGAGGAAACCCTA 59.095 55.000 0.00 0.00 33.25 3.53
1171 1312 1.279271 GCAGCAGAGAGGAAACCCTAA 59.721 52.381 0.00 0.00 33.25 2.69
1172 1313 2.679349 GCAGCAGAGAGGAAACCCTAAG 60.679 54.545 0.00 0.00 33.25 2.18
1173 1314 1.557371 AGCAGAGAGGAAACCCTAAGC 59.443 52.381 0.00 0.00 33.25 3.09
1174 1315 1.279271 GCAGAGAGGAAACCCTAAGCA 59.721 52.381 0.00 0.00 33.25 3.91
1175 1316 2.290323 GCAGAGAGGAAACCCTAAGCAA 60.290 50.000 0.00 0.00 33.25 3.91
1261 1455 5.126384 GGTGAAGAGCTACAGAGAGTACATT 59.874 44.000 0.00 0.00 0.00 2.71
1309 1536 3.760537 ACTTCGTAAAGACTGCGAGATC 58.239 45.455 0.00 0.00 43.33 2.75
1313 1540 2.854777 CGTAAAGACTGCGAGATCAAGG 59.145 50.000 0.00 0.00 34.69 3.61
1339 1581 1.140312 GGACATATGGGGAGCAGGAA 58.860 55.000 7.80 0.00 0.00 3.36
1342 1584 3.416156 GACATATGGGGAGCAGGAAATC 58.584 50.000 7.80 0.00 0.00 2.17
1383 1625 3.138468 AGCAGGTCCTTTTGTTCCTTACT 59.862 43.478 0.00 0.00 0.00 2.24
1395 1637 0.616891 TCCTTACTTTCGCCTTCCCC 59.383 55.000 0.00 0.00 0.00 4.81
1418 1660 0.377203 CGCGGCAGGTAAGAAATTCC 59.623 55.000 0.00 0.00 0.00 3.01
1439 1681 4.827284 TCCTGACTCCAAATTTTCTTCCAC 59.173 41.667 0.00 0.00 0.00 4.02
1608 1850 7.361542 CCTTTGTGATTTCTTGAAGATCGATGT 60.362 37.037 0.54 0.00 0.00 3.06
1627 1869 8.196802 TCGATGTAGGAACATAATGAAAAGTG 57.803 34.615 0.00 0.00 46.49 3.16
1795 2681 2.308570 TGGATGGGAGTATGCTGTTGTT 59.691 45.455 0.00 0.00 0.00 2.83
1797 2683 4.018870 TGGATGGGAGTATGCTGTTGTTTA 60.019 41.667 0.00 0.00 0.00 2.01
1798 2684 4.335594 GGATGGGAGTATGCTGTTGTTTAC 59.664 45.833 0.00 0.00 0.00 2.01
1799 2685 4.634012 TGGGAGTATGCTGTTGTTTACT 57.366 40.909 0.00 0.00 0.00 2.24
1800 2686 5.748670 TGGGAGTATGCTGTTGTTTACTA 57.251 39.130 0.00 0.00 0.00 1.82
1801 2687 6.116711 TGGGAGTATGCTGTTGTTTACTAA 57.883 37.500 0.00 0.00 0.00 2.24
1861 2747 3.294214 GGACTTGACGGAGGGAGTAATA 58.706 50.000 0.00 0.00 0.00 0.98
2050 2952 4.723309 AGATTAAAGACCCTGGATGCATC 58.277 43.478 18.81 18.81 0.00 3.91
2064 2972 6.154203 TGGATGCATCGATATCCTATCTTC 57.846 41.667 22.14 2.05 42.67 2.87
2065 2973 5.896106 TGGATGCATCGATATCCTATCTTCT 59.104 40.000 22.14 0.00 42.67 2.85
2066 2974 6.382282 TGGATGCATCGATATCCTATCTTCTT 59.618 38.462 22.14 0.00 42.67 2.52
2140 3058 5.375956 TGTTACTCCCTCTGTCCCTATCTAT 59.624 44.000 0.00 0.00 0.00 1.98
2190 3109 8.712285 AACATTGACCATCAATTTCATCAATC 57.288 30.769 1.25 0.00 44.03 2.67
2192 3111 8.315482 ACATTGACCATCAATTTCATCAATCAA 58.685 29.630 1.25 0.00 44.03 2.57
2193 3112 9.325198 CATTGACCATCAATTTCATCAATCAAT 57.675 29.630 1.25 0.00 44.03 2.57
2294 3213 5.105064 ACCTAGCTCACACGTTATTGGTTAT 60.105 40.000 0.00 0.00 0.00 1.89
2295 3214 5.815740 CCTAGCTCACACGTTATTGGTTATT 59.184 40.000 0.00 0.00 0.00 1.40
2296 3215 6.982141 CCTAGCTCACACGTTATTGGTTATTA 59.018 38.462 0.00 0.00 0.00 0.98
2326 3245 0.878416 ACAAAATACGCGTGTGCCAT 59.122 45.000 24.59 3.27 38.08 4.40
2556 3512 7.179872 AGGAACTCGGTAGAACCTAAAGTAAAT 59.820 37.037 0.00 0.00 35.66 1.40
2629 3599 0.679505 TGAGCGTGGCTACAACTCTT 59.320 50.000 17.46 0.00 39.88 2.85
2643 3613 7.291567 GCTACAACTCTTTGTGTGTCTATTTC 58.708 38.462 0.21 0.00 45.91 2.17
2683 3653 1.339610 CTGCCTGCTAGTAGCCTAGTG 59.660 57.143 19.41 6.64 41.51 2.74
2717 3847 1.872952 CAATCACTTTGTGCGTCCTGA 59.127 47.619 0.00 0.00 32.98 3.86
2746 3878 7.334844 ACTTCTTTTTAATAGTATGGCAGGC 57.665 36.000 0.00 0.00 0.00 4.85
2749 3881 7.095695 TCTTTTTAATAGTATGGCAGGCAAC 57.904 36.000 0.00 0.89 0.00 4.17
2860 3992 8.870160 TGGTTTTCATTGATGTTCAGTTAAAG 57.130 30.769 0.00 0.00 0.00 1.85
2911 4043 6.198687 TGAAGTGCTGACTTACAAATTTTCG 58.801 36.000 0.00 0.00 42.80 3.46
2944 4076 7.660030 TCAACTTTTTCCTTTTGATCCTTCT 57.340 32.000 0.00 0.00 0.00 2.85
3074 4206 1.376543 GTCATGGCCTGATCAGTGTG 58.623 55.000 21.11 13.18 35.97 3.82
3093 4225 3.233231 GGGGCTGGTTGCTTGCAA 61.233 61.111 3.70 3.70 42.39 4.08
3100 4232 1.131126 CTGGTTGCTTGCAATACCGAG 59.869 52.381 11.32 12.21 33.29 4.63
3116 4248 1.405661 CCGAGAGTGTAAAAGGAGGGC 60.406 57.143 0.00 0.00 0.00 5.19
3196 4328 1.160329 AGCTTGTGAGGCGTGTTGTC 61.160 55.000 0.00 0.00 34.52 3.18
3277 4410 3.378911 TCTGCACAATGTACAGTCGAA 57.621 42.857 12.80 0.00 29.81 3.71
3319 4455 4.686554 GGAAGAAGTACTGACATGTGTGAC 59.313 45.833 1.15 0.00 0.00 3.67
3385 4521 7.833183 ACTCTTCTTCTGCAAAATATCCTTGAT 59.167 33.333 0.00 0.00 0.00 2.57
3406 4568 4.503741 TTAGCCAGCTGTTGAACAATTC 57.496 40.909 13.81 0.00 0.00 2.17
3457 4619 5.536538 CACTCTACATGCCTATCCTAGTTGA 59.463 44.000 0.00 0.00 0.00 3.18
3464 4626 8.627208 ACATGCCTATCCTAGTTGATTAATTG 57.373 34.615 0.00 0.00 0.00 2.32
3565 4760 8.458052 CACTATGCAATTATACCTTGTTTGTGA 58.542 33.333 0.00 0.00 0.00 3.58
3586 4781 9.906660 TTGTGAAAGTTAAGCTTATTGGTATTG 57.093 29.630 7.08 0.00 36.17 1.90
3594 4789 5.124036 AGCTTATTGGTATTGGGTGCTAA 57.876 39.130 0.00 0.00 0.00 3.09
3595 4790 5.133221 AGCTTATTGGTATTGGGTGCTAAG 58.867 41.667 0.00 0.00 0.00 2.18
3603 4950 4.634443 GGTATTGGGTGCTAAGTTGTGTAG 59.366 45.833 0.00 0.00 0.00 2.74
3617 4964 2.691927 TGTGTAGAACTCTGCATGCAG 58.308 47.619 36.80 36.80 40.55 4.41
3647 4994 3.434637 CCAACCGTTGTGTTTCTTCTTG 58.565 45.455 10.34 0.00 0.00 3.02
3729 5076 6.685527 TTTGCTATGTTGATTACGCCATTA 57.314 33.333 0.00 0.00 0.00 1.90
3739 5086 2.170012 TACGCCATTAGTCCTTCCCT 57.830 50.000 0.00 0.00 0.00 4.20
3753 5100 7.939784 AGTCCTTCCCTAACATGATTAAAAC 57.060 36.000 0.00 0.00 0.00 2.43
3755 5102 5.883673 TCCTTCCCTAACATGATTAAAACCG 59.116 40.000 0.00 0.00 0.00 4.44
3759 5106 6.478129 TCCCTAACATGATTAAAACCGAGTT 58.522 36.000 0.00 0.00 0.00 3.01
3795 5142 1.153489 TCTGATCCTGAAGCAGCGC 60.153 57.895 0.00 0.00 0.00 5.92
3819 5166 3.846405 TTCCACTGGGTCCCTCGCT 62.846 63.158 10.00 0.00 34.93 4.93
3924 5273 2.678336 CAAGCTCGGGAAAGTTGTATCC 59.322 50.000 0.00 0.00 34.85 2.59
3947 5302 1.001158 GCTCAGGTACACGCTCTATCC 60.001 57.143 0.00 0.00 0.00 2.59
3950 5305 1.007618 GGTACACGCTCTATCCCGC 60.008 63.158 0.00 0.00 0.00 6.13
3953 5308 2.635787 TACACGCTCTATCCCGCCCT 62.636 60.000 0.00 0.00 0.00 5.19
3965 5320 0.546598 CCCGCCCTCCTATTCTTGTT 59.453 55.000 0.00 0.00 0.00 2.83
3966 5321 1.668419 CCGCCCTCCTATTCTTGTTG 58.332 55.000 0.00 0.00 0.00 3.33
3977 5332 3.818961 ATTCTTGTTGTGATCTGTGCG 57.181 42.857 0.00 0.00 0.00 5.34
4005 5360 4.642429 ACAGACTGGAGCGAATAGTTTTT 58.358 39.130 7.51 0.00 0.00 1.94
4006 5361 5.790593 ACAGACTGGAGCGAATAGTTTTTA 58.209 37.500 7.51 0.00 0.00 1.52
4011 5366 8.451748 AGACTGGAGCGAATAGTTTTTATTTTC 58.548 33.333 0.00 0.00 0.00 2.29
4012 5367 8.336801 ACTGGAGCGAATAGTTTTTATTTTCT 57.663 30.769 0.00 0.00 0.00 2.52
4068 5423 5.106157 ACACGATTTGAAAGATCATCAACCC 60.106 40.000 12.05 7.38 36.57 4.11
4070 5425 5.476599 ACGATTTGAAAGATCATCAACCCAA 59.523 36.000 12.05 1.14 36.57 4.12
4071 5426 6.153340 ACGATTTGAAAGATCATCAACCCAAT 59.847 34.615 12.05 5.16 36.57 3.16
4072 5427 7.339212 ACGATTTGAAAGATCATCAACCCAATA 59.661 33.333 12.05 0.25 36.57 1.90
4073 5428 7.645340 CGATTTGAAAGATCATCAACCCAATAC 59.355 37.037 12.05 1.90 36.57 1.89
4074 5429 8.599624 ATTTGAAAGATCATCAACCCAATACT 57.400 30.769 12.05 0.00 36.57 2.12
4075 5430 9.699410 ATTTGAAAGATCATCAACCCAATACTA 57.301 29.630 12.05 0.00 36.57 1.82
4076 5431 9.699410 TTTGAAAGATCATCAACCCAATACTAT 57.301 29.630 12.05 0.00 36.57 2.12
4104 5459 8.682936 ATATGCATTTCCTTTTTAGATCTCGT 57.317 30.769 3.54 0.00 0.00 4.18
4105 5460 6.817765 TGCATTTCCTTTTTAGATCTCGTT 57.182 33.333 0.00 0.00 0.00 3.85
4106 5461 7.214467 TGCATTTCCTTTTTAGATCTCGTTT 57.786 32.000 0.00 0.00 0.00 3.60
4107 5462 7.657336 TGCATTTCCTTTTTAGATCTCGTTTT 58.343 30.769 0.00 0.00 0.00 2.43
4108 5463 7.807907 TGCATTTCCTTTTTAGATCTCGTTTTC 59.192 33.333 0.00 0.00 0.00 2.29
4109 5464 8.023706 GCATTTCCTTTTTAGATCTCGTTTTCT 58.976 33.333 0.00 0.00 0.00 2.52
4110 5465 9.548208 CATTTCCTTTTTAGATCTCGTTTTCTC 57.452 33.333 0.00 0.00 0.00 2.87
4111 5466 8.671384 TTTCCTTTTTAGATCTCGTTTTCTCA 57.329 30.769 0.00 0.00 0.00 3.27
4112 5467 8.848474 TTCCTTTTTAGATCTCGTTTTCTCAT 57.152 30.769 0.00 0.00 0.00 2.90
4113 5468 8.848474 TCCTTTTTAGATCTCGTTTTCTCATT 57.152 30.769 0.00 0.00 0.00 2.57
4114 5469 9.284968 TCCTTTTTAGATCTCGTTTTCTCATTT 57.715 29.630 0.00 0.00 0.00 2.32
4115 5470 9.899226 CCTTTTTAGATCTCGTTTTCTCATTTT 57.101 29.630 0.00 0.00 0.00 1.82
4118 5473 8.728088 TTTAGATCTCGTTTTCTCATTTTTGC 57.272 30.769 0.00 0.00 0.00 3.68
4119 5474 6.317789 AGATCTCGTTTTCTCATTTTTGCA 57.682 33.333 0.00 0.00 0.00 4.08
4120 5475 6.145535 AGATCTCGTTTTCTCATTTTTGCAC 58.854 36.000 0.00 0.00 0.00 4.57
4121 5476 5.499139 TCTCGTTTTCTCATTTTTGCACT 57.501 34.783 0.00 0.00 0.00 4.40
4122 5477 6.612247 TCTCGTTTTCTCATTTTTGCACTA 57.388 33.333 0.00 0.00 0.00 2.74
4123 5478 7.022055 TCTCGTTTTCTCATTTTTGCACTAA 57.978 32.000 0.00 0.00 0.00 2.24
4124 5479 7.476667 TCTCGTTTTCTCATTTTTGCACTAAA 58.523 30.769 0.00 0.00 0.00 1.85
4125 5480 8.134895 TCTCGTTTTCTCATTTTTGCACTAAAT 58.865 29.630 0.00 0.00 0.00 1.40
4126 5481 8.641499 TCGTTTTCTCATTTTTGCACTAAATT 57.359 26.923 3.78 0.00 0.00 1.82
4127 5482 8.538856 TCGTTTTCTCATTTTTGCACTAAATTG 58.461 29.630 3.78 2.40 0.00 2.32
4128 5483 7.793427 CGTTTTCTCATTTTTGCACTAAATTGG 59.207 33.333 3.78 1.64 0.00 3.16
4129 5484 8.825745 GTTTTCTCATTTTTGCACTAAATTGGA 58.174 29.630 3.78 3.46 0.00 3.53
4130 5485 8.592105 TTTCTCATTTTTGCACTAAATTGGAG 57.408 30.769 3.78 8.15 0.00 3.86
4131 5486 7.523293 TCTCATTTTTGCACTAAATTGGAGA 57.477 32.000 13.81 13.81 31.33 3.71
4132 5487 8.125978 TCTCATTTTTGCACTAAATTGGAGAT 57.874 30.769 13.81 0.00 30.05 2.75
4133 5488 8.246180 TCTCATTTTTGCACTAAATTGGAGATC 58.754 33.333 13.81 0.00 30.05 2.75
4134 5489 8.125978 TCATTTTTGCACTAAATTGGAGATCT 57.874 30.769 0.00 0.00 0.00 2.75
4135 5490 8.587608 TCATTTTTGCACTAAATTGGAGATCTT 58.412 29.630 0.00 0.00 0.00 2.40
4136 5491 8.653338 CATTTTTGCACTAAATTGGAGATCTTG 58.347 33.333 0.00 0.00 0.00 3.02
4137 5492 5.902613 TTGCACTAAATTGGAGATCTTGG 57.097 39.130 0.00 0.00 0.00 3.61
4138 5493 5.178096 TGCACTAAATTGGAGATCTTGGA 57.822 39.130 0.00 0.00 0.00 3.53
4139 5494 5.188434 TGCACTAAATTGGAGATCTTGGAG 58.812 41.667 0.00 0.00 0.00 3.86
4140 5495 4.578105 GCACTAAATTGGAGATCTTGGAGG 59.422 45.833 0.00 0.00 0.00 4.30
4141 5496 5.630069 GCACTAAATTGGAGATCTTGGAGGA 60.630 44.000 0.00 0.00 0.00 3.71
4142 5497 6.599445 CACTAAATTGGAGATCTTGGAGGAT 58.401 40.000 0.00 0.00 0.00 3.24
4143 5498 6.485984 CACTAAATTGGAGATCTTGGAGGATG 59.514 42.308 0.00 0.00 0.00 3.51
4144 5499 3.505480 ATTGGAGATCTTGGAGGATGC 57.495 47.619 0.00 0.00 0.00 3.91
4145 5500 1.135094 TGGAGATCTTGGAGGATGCC 58.865 55.000 0.00 0.00 0.00 4.40
4146 5501 0.034616 GGAGATCTTGGAGGATGCCG 59.965 60.000 0.00 0.00 0.00 5.69
4147 5502 0.602372 GAGATCTTGGAGGATGCCGC 60.602 60.000 0.00 0.00 0.00 6.53
4148 5503 1.053264 AGATCTTGGAGGATGCCGCT 61.053 55.000 0.00 0.00 0.00 5.52
4149 5504 0.179034 GATCTTGGAGGATGCCGCTT 60.179 55.000 0.00 0.00 0.00 4.68
4150 5505 0.179034 ATCTTGGAGGATGCCGCTTC 60.179 55.000 0.00 0.00 0.00 3.86
4151 5506 2.125147 TTGGAGGATGCCGCTTCG 60.125 61.111 0.54 0.00 0.00 3.79
4152 5507 2.578163 CTTGGAGGATGCCGCTTCGA 62.578 60.000 0.54 0.00 0.00 3.71
4153 5508 2.586357 GGAGGATGCCGCTTCGAC 60.586 66.667 0.54 0.00 0.00 4.20
4154 5509 2.184322 GAGGATGCCGCTTCGACA 59.816 61.111 0.54 0.00 0.00 4.35
4155 5510 2.125512 AGGATGCCGCTTCGACAC 60.126 61.111 0.54 0.00 0.00 3.67
4156 5511 3.554692 GGATGCCGCTTCGACACG 61.555 66.667 0.00 0.00 0.00 4.49
4157 5512 4.210304 GATGCCGCTTCGACACGC 62.210 66.667 0.81 0.00 0.00 5.34
4158 5513 4.742201 ATGCCGCTTCGACACGCT 62.742 61.111 0.81 0.00 0.00 5.07
4159 5514 4.961511 TGCCGCTTCGACACGCTT 62.962 61.111 0.81 0.00 0.00 4.68
4160 5515 4.135493 GCCGCTTCGACACGCTTC 62.135 66.667 0.81 0.00 0.00 3.86
4161 5516 3.827784 CCGCTTCGACACGCTTCG 61.828 66.667 0.81 0.00 40.53 3.79
4162 5517 2.799502 CGCTTCGACACGCTTCGA 60.800 61.111 4.93 4.93 46.12 3.71
4166 5521 2.426261 TCGACACGCTTCGACACG 60.426 61.111 4.93 4.81 43.01 4.49
4167 5522 4.104633 CGACACGCTTCGACACGC 62.105 66.667 6.20 0.00 41.78 5.34
4168 5523 2.729862 GACACGCTTCGACACGCT 60.730 61.111 6.20 0.00 0.00 5.07
4169 5524 2.988549 GACACGCTTCGACACGCTG 61.989 63.158 6.20 6.71 0.00 5.18
4170 5525 4.415501 CACGCTTCGACACGCTGC 62.416 66.667 6.20 0.00 0.00 5.25
4173 5528 3.832171 GCTTCGACACGCTGCGAG 61.832 66.667 30.47 23.73 37.85 5.03
4174 5529 2.126850 CTTCGACACGCTGCGAGA 60.127 61.111 30.47 17.92 37.85 4.04
4175 5530 1.515088 CTTCGACACGCTGCGAGAT 60.515 57.895 30.47 13.09 37.85 2.75
4176 5531 1.737196 CTTCGACACGCTGCGAGATG 61.737 60.000 30.47 18.84 37.85 2.90
4177 5532 3.906649 CGACACGCTGCGAGATGC 61.907 66.667 30.47 14.11 46.70 3.91
4178 5533 3.558411 GACACGCTGCGAGATGCC 61.558 66.667 30.47 5.27 45.60 4.40
4205 5560 3.041940 CGGTGGTCGGTGCAGTTC 61.042 66.667 0.00 0.00 34.75 3.01
4206 5561 3.041940 GGTGGTCGGTGCAGTTCG 61.042 66.667 0.00 0.00 0.00 3.95
4207 5562 3.712881 GTGGTCGGTGCAGTTCGC 61.713 66.667 0.00 0.00 42.89 4.70
4208 5563 4.980805 TGGTCGGTGCAGTTCGCC 62.981 66.667 0.00 0.00 41.33 5.54
4217 5572 2.956964 CAGTTCGCCGCCGATCTC 60.957 66.667 0.00 0.00 43.97 2.75
4218 5573 3.449227 AGTTCGCCGCCGATCTCA 61.449 61.111 0.00 0.00 43.97 3.27
4219 5574 2.508439 GTTCGCCGCCGATCTCAA 60.508 61.111 0.00 0.00 43.97 3.02
4220 5575 2.098233 GTTCGCCGCCGATCTCAAA 61.098 57.895 0.00 0.00 43.97 2.69
4221 5576 1.153449 TTCGCCGCCGATCTCAAAT 60.153 52.632 0.00 0.00 43.97 2.32
4222 5577 1.151777 TTCGCCGCCGATCTCAAATC 61.152 55.000 0.00 0.00 43.97 2.17
4223 5578 2.931386 GCCGCCGATCTCAAATCG 59.069 61.111 0.58 0.58 40.86 3.34
4229 5584 1.927210 CGATCTCAAATCGGTGGCG 59.073 57.895 0.00 0.00 37.84 5.69
4230 5585 1.643832 GATCTCAAATCGGTGGCGC 59.356 57.895 0.00 0.00 0.00 6.53
4231 5586 2.094126 GATCTCAAATCGGTGGCGCG 62.094 60.000 0.00 0.00 0.00 6.86
4232 5587 3.864686 CTCAAATCGGTGGCGCGG 61.865 66.667 8.83 0.00 0.00 6.46
4243 5598 2.826738 GGCGCGGCCTAAAATCCA 60.827 61.111 23.89 0.00 46.69 3.41
4244 5599 2.407616 GCGCGGCCTAAAATCCAC 59.592 61.111 8.83 0.00 0.00 4.02
4245 5600 3.107447 CGCGGCCTAAAATCCACC 58.893 61.111 0.00 0.00 0.00 4.61
4246 5601 2.819552 CGCGGCCTAAAATCCACCG 61.820 63.158 0.00 0.00 46.50 4.94
4247 5602 1.747745 GCGGCCTAAAATCCACCGT 60.748 57.895 0.00 0.00 45.53 4.83
4248 5603 1.988834 GCGGCCTAAAATCCACCGTG 61.989 60.000 0.00 0.00 45.53 4.94
4249 5604 1.373590 CGGCCTAAAATCCACCGTGG 61.374 60.000 11.73 11.73 39.05 4.94
4250 5605 1.663379 GGCCTAAAATCCACCGTGGC 61.663 60.000 13.19 0.00 37.47 5.01
4251 5606 1.988834 GCCTAAAATCCACCGTGGCG 61.989 60.000 13.19 0.00 37.47 5.69
4252 5607 0.675522 CCTAAAATCCACCGTGGCGT 60.676 55.000 13.19 0.99 37.47 5.68
4253 5608 0.446222 CTAAAATCCACCGTGGCGTG 59.554 55.000 13.19 0.00 37.47 5.34
4282 5637 4.735132 CCCACACACCGCGACGAT 62.735 66.667 8.23 0.00 0.00 3.73
4283 5638 2.179767 CCACACACCGCGACGATA 59.820 61.111 8.23 0.00 0.00 2.92
4284 5639 1.226859 CCACACACCGCGACGATAT 60.227 57.895 8.23 0.00 0.00 1.63
4285 5640 0.804544 CCACACACCGCGACGATATT 60.805 55.000 8.23 0.00 0.00 1.28
4286 5641 0.570734 CACACACCGCGACGATATTC 59.429 55.000 8.23 0.00 0.00 1.75
4287 5642 0.526954 ACACACCGCGACGATATTCC 60.527 55.000 8.23 0.00 0.00 3.01
4288 5643 0.248907 CACACCGCGACGATATTCCT 60.249 55.000 8.23 0.00 0.00 3.36
4289 5644 0.248907 ACACCGCGACGATATTCCTG 60.249 55.000 8.23 0.00 0.00 3.86
4290 5645 0.939577 CACCGCGACGATATTCCTGG 60.940 60.000 8.23 0.00 0.00 4.45
4291 5646 1.362717 CCGCGACGATATTCCTGGT 59.637 57.895 8.23 0.00 0.00 4.00
4292 5647 0.249322 CCGCGACGATATTCCTGGTT 60.249 55.000 8.23 0.00 0.00 3.67
4293 5648 0.852777 CGCGACGATATTCCTGGTTG 59.147 55.000 0.00 0.00 0.00 3.77
4294 5649 1.535226 CGCGACGATATTCCTGGTTGA 60.535 52.381 0.00 0.00 0.00 3.18
4295 5650 1.859080 GCGACGATATTCCTGGTTGAC 59.141 52.381 0.00 0.00 0.00 3.18
4296 5651 2.117137 CGACGATATTCCTGGTTGACG 58.883 52.381 0.00 0.00 0.00 4.35
4297 5652 2.223409 CGACGATATTCCTGGTTGACGA 60.223 50.000 0.00 0.00 0.00 4.20
4298 5653 3.372954 GACGATATTCCTGGTTGACGAG 58.627 50.000 0.00 0.00 0.00 4.18
4299 5654 2.128035 CGATATTCCTGGTTGACGAGC 58.872 52.381 0.00 0.00 0.00 5.03
4300 5655 2.128035 GATATTCCTGGTTGACGAGCG 58.872 52.381 0.00 0.00 0.00 5.03
4301 5656 0.459585 TATTCCTGGTTGACGAGCGC 60.460 55.000 0.00 0.00 0.00 5.92
4302 5657 4.717629 TCCTGGTTGACGAGCGCG 62.718 66.667 8.75 8.75 44.79 6.86
4318 5673 4.920112 CGGGTGCACGGTGGACAA 62.920 66.667 29.60 0.00 40.73 3.18
4319 5674 2.978010 GGGTGCACGGTGGACAAG 60.978 66.667 29.60 0.00 40.73 3.16
4320 5675 3.660111 GGTGCACGGTGGACAAGC 61.660 66.667 29.60 12.45 40.73 4.01
4341 5696 4.692475 CGGGAGGCGGGTTCGTTT 62.692 66.667 0.00 0.00 38.89 3.60
4342 5697 2.281970 GGGAGGCGGGTTCGTTTT 60.282 61.111 0.00 0.00 38.89 2.43
4343 5698 2.622962 GGGAGGCGGGTTCGTTTTG 61.623 63.158 0.00 0.00 38.89 2.44
4344 5699 1.598685 GGAGGCGGGTTCGTTTTGA 60.599 57.895 0.00 0.00 38.89 2.69
4345 5700 1.574702 GGAGGCGGGTTCGTTTTGAG 61.575 60.000 0.00 0.00 38.89 3.02
4346 5701 2.183858 GAGGCGGGTTCGTTTTGAGC 62.184 60.000 0.00 0.00 38.89 4.26
4347 5702 2.254350 GCGGGTTCGTTTTGAGCC 59.746 61.111 0.00 0.00 46.63 4.70
4350 5705 2.951458 GGTTCGTTTTGAGCCCGG 59.049 61.111 0.00 0.00 41.86 5.73
4351 5706 2.622962 GGTTCGTTTTGAGCCCGGG 61.623 63.158 19.09 19.09 41.86 5.73
4352 5707 2.281900 TTCGTTTTGAGCCCGGGG 60.282 61.111 25.28 9.31 0.00 5.73
4353 5708 3.853698 TTCGTTTTGAGCCCGGGGG 62.854 63.158 25.28 2.24 38.57 5.40
4371 5726 4.003788 CCACAGTCGCGTTCCCCT 62.004 66.667 5.77 0.00 0.00 4.79
4372 5727 2.738521 CACAGTCGCGTTCCCCTG 60.739 66.667 5.77 8.33 0.00 4.45
4373 5728 4.681978 ACAGTCGCGTTCCCCTGC 62.682 66.667 5.77 0.00 0.00 4.85
4380 5735 3.353836 CGTTCCCCTGCCACGTTG 61.354 66.667 0.00 0.00 0.00 4.10
4381 5736 3.670377 GTTCCCCTGCCACGTTGC 61.670 66.667 4.35 4.35 0.00 4.17
4394 5749 3.918220 GTTGCGCGCATCGAGGAG 61.918 66.667 36.83 0.00 41.67 3.69
4395 5750 4.128388 TTGCGCGCATCGAGGAGA 62.128 61.111 36.83 15.05 41.67 3.71
4396 5751 3.641159 TTGCGCGCATCGAGGAGAA 62.641 57.895 36.83 14.18 41.67 2.87
4397 5752 3.621394 GCGCGCATCGAGGAGAAC 61.621 66.667 29.10 0.00 41.67 3.01
4398 5753 2.202610 CGCGCATCGAGGAGAACA 60.203 61.111 8.75 0.00 41.67 3.18
4399 5754 1.589993 CGCGCATCGAGGAGAACAT 60.590 57.895 8.75 0.00 41.67 2.71
4400 5755 1.543941 CGCGCATCGAGGAGAACATC 61.544 60.000 8.75 0.00 41.67 3.06
4401 5756 0.528466 GCGCATCGAGGAGAACATCA 60.528 55.000 4.63 0.00 0.00 3.07
4402 5757 1.203928 CGCATCGAGGAGAACATCAC 58.796 55.000 0.00 0.00 0.00 3.06
4403 5758 1.576356 GCATCGAGGAGAACATCACC 58.424 55.000 0.00 0.00 0.00 4.02
4404 5759 1.845266 CATCGAGGAGAACATCACCG 58.155 55.000 0.00 0.00 32.07 4.94
4405 5760 0.747255 ATCGAGGAGAACATCACCGG 59.253 55.000 0.00 0.00 32.07 5.28
4406 5761 1.519455 CGAGGAGAACATCACCGGC 60.519 63.158 0.00 0.00 32.07 6.13
4407 5762 1.519455 GAGGAGAACATCACCGGCG 60.519 63.158 0.00 0.00 32.07 6.46
4408 5763 2.511600 GGAGAACATCACCGGCGG 60.512 66.667 27.06 27.06 0.00 6.13
4409 5764 2.511600 GAGAACATCACCGGCGGG 60.512 66.667 31.78 19.08 40.11 6.13
4410 5765 4.096003 AGAACATCACCGGCGGGG 62.096 66.667 31.78 28.82 43.62 5.73
4426 5781 3.407967 GGGGGTTGCATCGGGAGA 61.408 66.667 0.00 0.00 46.90 3.71
4427 5782 2.124695 GGGGTTGCATCGGGAGAC 60.125 66.667 0.00 0.00 44.82 3.36
4428 5783 2.511600 GGGTTGCATCGGGAGACG 60.512 66.667 0.00 0.00 44.82 4.18
4429 5784 2.511600 GGTTGCATCGGGAGACGG 60.512 66.667 0.00 0.00 44.82 4.79
4430 5785 3.195698 GTTGCATCGGGAGACGGC 61.196 66.667 0.00 0.00 44.82 5.68
4431 5786 4.812476 TTGCATCGGGAGACGGCG 62.812 66.667 4.80 4.80 44.82 6.46
4446 5801 1.794222 GGCGACGGAGAAATTGTGG 59.206 57.895 0.00 0.00 0.00 4.17
4447 5802 1.134694 GCGACGGAGAAATTGTGGC 59.865 57.895 0.00 0.00 0.00 5.01
4448 5803 1.298859 GCGACGGAGAAATTGTGGCT 61.299 55.000 0.00 0.00 34.94 4.75
4449 5804 0.443869 CGACGGAGAAATTGTGGCTG 59.556 55.000 0.00 0.00 0.00 4.85
4450 5805 0.804989 GACGGAGAAATTGTGGCTGG 59.195 55.000 0.00 0.00 0.00 4.85
4451 5806 0.110486 ACGGAGAAATTGTGGCTGGT 59.890 50.000 0.00 0.00 0.00 4.00
4452 5807 0.523072 CGGAGAAATTGTGGCTGGTG 59.477 55.000 0.00 0.00 0.00 4.17
4453 5808 0.890683 GGAGAAATTGTGGCTGGTGG 59.109 55.000 0.00 0.00 0.00 4.61
4454 5809 0.890683 GAGAAATTGTGGCTGGTGGG 59.109 55.000 0.00 0.00 0.00 4.61
4455 5810 0.542702 AGAAATTGTGGCTGGTGGGG 60.543 55.000 0.00 0.00 0.00 4.96
4456 5811 1.536174 AAATTGTGGCTGGTGGGGG 60.536 57.895 0.00 0.00 0.00 5.40
4457 5812 2.325101 AAATTGTGGCTGGTGGGGGT 62.325 55.000 0.00 0.00 0.00 4.95
4458 5813 3.528217 ATTGTGGCTGGTGGGGGTG 62.528 63.158 0.00 0.00 0.00 4.61
4463 5818 4.603535 GCTGGTGGGGGTGCAGTT 62.604 66.667 0.00 0.00 0.00 3.16
4464 5819 3.166434 CTGGTGGGGGTGCAGTTA 58.834 61.111 0.00 0.00 0.00 2.24
4465 5820 1.458486 CTGGTGGGGGTGCAGTTAA 59.542 57.895 0.00 0.00 0.00 2.01
4466 5821 0.609131 CTGGTGGGGGTGCAGTTAAG 60.609 60.000 0.00 0.00 0.00 1.85
4467 5822 1.304134 GGTGGGGGTGCAGTTAAGG 60.304 63.158 0.00 0.00 0.00 2.69
4468 5823 1.458927 GTGGGGGTGCAGTTAAGGT 59.541 57.895 0.00 0.00 0.00 3.50
4469 5824 0.893727 GTGGGGGTGCAGTTAAGGTG 60.894 60.000 0.00 0.00 0.00 4.00
4470 5825 1.304134 GGGGGTGCAGTTAAGGTGG 60.304 63.158 0.00 0.00 0.00 4.61
4471 5826 1.765074 GGGGTGCAGTTAAGGTGGA 59.235 57.895 0.00 0.00 0.00 4.02
4472 5827 0.322546 GGGGTGCAGTTAAGGTGGAG 60.323 60.000 0.00 0.00 0.00 3.86
4473 5828 0.690762 GGGTGCAGTTAAGGTGGAGA 59.309 55.000 0.00 0.00 0.00 3.71
4474 5829 1.339151 GGGTGCAGTTAAGGTGGAGAG 60.339 57.143 0.00 0.00 0.00 3.20
4475 5830 1.623811 GGTGCAGTTAAGGTGGAGAGA 59.376 52.381 0.00 0.00 0.00 3.10
4476 5831 2.038557 GGTGCAGTTAAGGTGGAGAGAA 59.961 50.000 0.00 0.00 0.00 2.87
4477 5832 3.330267 GTGCAGTTAAGGTGGAGAGAAG 58.670 50.000 0.00 0.00 0.00 2.85
4478 5833 3.006967 GTGCAGTTAAGGTGGAGAGAAGA 59.993 47.826 0.00 0.00 0.00 2.87
4479 5834 3.840666 TGCAGTTAAGGTGGAGAGAAGAT 59.159 43.478 0.00 0.00 0.00 2.40
4480 5835 4.287067 TGCAGTTAAGGTGGAGAGAAGATT 59.713 41.667 0.00 0.00 0.00 2.40
4481 5836 4.873259 GCAGTTAAGGTGGAGAGAAGATTC 59.127 45.833 0.00 0.00 0.00 2.52
4482 5837 5.569630 GCAGTTAAGGTGGAGAGAAGATTCA 60.570 44.000 0.00 0.00 0.00 2.57
4483 5838 6.105333 CAGTTAAGGTGGAGAGAAGATTCAG 58.895 44.000 0.00 0.00 0.00 3.02
4484 5839 6.019748 AGTTAAGGTGGAGAGAAGATTCAGA 58.980 40.000 0.00 0.00 0.00 3.27
4485 5840 6.671779 AGTTAAGGTGGAGAGAAGATTCAGAT 59.328 38.462 0.00 0.00 0.00 2.90
4486 5841 5.612725 AAGGTGGAGAGAAGATTCAGATC 57.387 43.478 0.00 0.00 0.00 2.75
4487 5842 3.636300 AGGTGGAGAGAAGATTCAGATCG 59.364 47.826 0.00 0.00 37.37 3.69
4488 5843 3.634448 GGTGGAGAGAAGATTCAGATCGA 59.366 47.826 0.00 0.00 37.37 3.59
4489 5844 4.261572 GGTGGAGAGAAGATTCAGATCGAG 60.262 50.000 0.00 0.00 37.37 4.04
4490 5845 4.578516 GTGGAGAGAAGATTCAGATCGAGA 59.421 45.833 0.00 0.00 37.37 4.04
4491 5846 5.241506 GTGGAGAGAAGATTCAGATCGAGAT 59.758 44.000 0.00 0.00 37.37 2.75
4492 5847 5.473162 TGGAGAGAAGATTCAGATCGAGATC 59.527 44.000 5.00 5.00 37.37 2.75
4502 5857 2.217750 AGATCGAGATCTGGTCAGACG 58.782 52.381 14.18 3.33 45.77 4.18
4503 5858 1.944024 GATCGAGATCTGGTCAGACGT 59.056 52.381 0.00 0.00 40.75 4.34
4504 5859 1.822506 TCGAGATCTGGTCAGACGTT 58.177 50.000 0.00 0.00 40.75 3.99
4505 5860 2.160205 TCGAGATCTGGTCAGACGTTT 58.840 47.619 0.00 0.00 40.75 3.60
4506 5861 2.161808 TCGAGATCTGGTCAGACGTTTC 59.838 50.000 0.00 0.00 40.75 2.78
4507 5862 2.732597 CGAGATCTGGTCAGACGTTTCC 60.733 54.545 0.00 0.00 40.75 3.13
4508 5863 1.202582 AGATCTGGTCAGACGTTTCCG 59.797 52.381 2.46 0.00 40.75 4.30
4509 5864 0.389948 ATCTGGTCAGACGTTTCCGC 60.390 55.000 2.46 0.00 40.75 5.54
4510 5865 1.300620 CTGGTCAGACGTTTCCGCA 60.301 57.895 0.00 0.00 37.70 5.69
4511 5866 0.670546 CTGGTCAGACGTTTCCGCAT 60.671 55.000 0.00 0.00 37.70 4.73
4512 5867 0.250124 TGGTCAGACGTTTCCGCATT 60.250 50.000 0.00 0.00 37.70 3.56
4513 5868 0.442699 GGTCAGACGTTTCCGCATTC 59.557 55.000 0.00 0.00 37.70 2.67
4514 5869 0.442699 GTCAGACGTTTCCGCATTCC 59.557 55.000 0.00 0.00 37.70 3.01
4515 5870 0.034198 TCAGACGTTTCCGCATTCCA 59.966 50.000 0.00 0.00 37.70 3.53
4516 5871 0.165944 CAGACGTTTCCGCATTCCAC 59.834 55.000 0.00 0.00 37.70 4.02
4517 5872 0.953960 AGACGTTTCCGCATTCCACC 60.954 55.000 0.00 0.00 37.70 4.61
4518 5873 1.918868 GACGTTTCCGCATTCCACCC 61.919 60.000 0.00 0.00 37.70 4.61
4519 5874 1.674322 CGTTTCCGCATTCCACCCT 60.674 57.895 0.00 0.00 0.00 4.34
4520 5875 1.644786 CGTTTCCGCATTCCACCCTC 61.645 60.000 0.00 0.00 0.00 4.30
4521 5876 1.001393 TTTCCGCATTCCACCCTCC 60.001 57.895 0.00 0.00 0.00 4.30
4522 5877 1.497309 TTTCCGCATTCCACCCTCCT 61.497 55.000 0.00 0.00 0.00 3.69
4523 5878 1.910580 TTCCGCATTCCACCCTCCTC 61.911 60.000 0.00 0.00 0.00 3.71
4524 5879 2.370445 CCGCATTCCACCCTCCTCT 61.370 63.158 0.00 0.00 0.00 3.69
4525 5880 1.144936 CGCATTCCACCCTCCTCTC 59.855 63.158 0.00 0.00 0.00 3.20
4526 5881 1.529309 GCATTCCACCCTCCTCTCC 59.471 63.158 0.00 0.00 0.00 3.71
4527 5882 0.985490 GCATTCCACCCTCCTCTCCT 60.985 60.000 0.00 0.00 0.00 3.69
4528 5883 0.835941 CATTCCACCCTCCTCTCCTG 59.164 60.000 0.00 0.00 0.00 3.86
4529 5884 0.985490 ATTCCACCCTCCTCTCCTGC 60.985 60.000 0.00 0.00 0.00 4.85
4530 5885 3.086600 CCACCCTCCTCTCCTGCC 61.087 72.222 0.00 0.00 0.00 4.85
4531 5886 2.040278 CACCCTCCTCTCCTGCCT 59.960 66.667 0.00 0.00 0.00 4.75
4532 5887 2.040278 ACCCTCCTCTCCTGCCTG 59.960 66.667 0.00 0.00 0.00 4.85
4533 5888 3.478274 CCCTCCTCTCCTGCCTGC 61.478 72.222 0.00 0.00 0.00 4.85
4534 5889 3.478274 CCTCCTCTCCTGCCTGCC 61.478 72.222 0.00 0.00 0.00 4.85
4535 5890 3.478274 CTCCTCTCCTGCCTGCCC 61.478 72.222 0.00 0.00 0.00 5.36
4538 5893 3.333219 CTCTCCTGCCTGCCCCAA 61.333 66.667 0.00 0.00 0.00 4.12
4539 5894 3.635268 CTCTCCTGCCTGCCCCAAC 62.635 68.421 0.00 0.00 0.00 3.77
4540 5895 3.655211 CTCCTGCCTGCCCCAACT 61.655 66.667 0.00 0.00 0.00 3.16
4541 5896 3.185203 TCCTGCCTGCCCCAACTT 61.185 61.111 0.00 0.00 0.00 2.66
4542 5897 2.677875 CCTGCCTGCCCCAACTTC 60.678 66.667 0.00 0.00 0.00 3.01
4543 5898 2.677875 CTGCCTGCCCCAACTTCC 60.678 66.667 0.00 0.00 0.00 3.46
4544 5899 3.185203 TGCCTGCCCCAACTTCCT 61.185 61.111 0.00 0.00 0.00 3.36
4545 5900 2.361737 GCCTGCCCCAACTTCCTC 60.362 66.667 0.00 0.00 0.00 3.71
4546 5901 2.356667 CCTGCCCCAACTTCCTCC 59.643 66.667 0.00 0.00 0.00 4.30
4547 5902 2.356667 CTGCCCCAACTTCCTCCC 59.643 66.667 0.00 0.00 0.00 4.30
4548 5903 2.121506 TGCCCCAACTTCCTCCCT 60.122 61.111 0.00 0.00 0.00 4.20
4549 5904 2.356667 GCCCCAACTTCCTCCCTG 59.643 66.667 0.00 0.00 0.00 4.45
4550 5905 3.090765 CCCCAACTTCCTCCCTGG 58.909 66.667 0.00 0.00 37.10 4.45
4551 5906 1.852626 CCCCAACTTCCTCCCTGGT 60.853 63.158 0.00 0.00 37.07 4.00
4552 5907 1.685820 CCCAACTTCCTCCCTGGTC 59.314 63.158 0.00 0.00 37.07 4.02
4553 5908 1.296715 CCAACTTCCTCCCTGGTCG 59.703 63.158 0.00 0.00 37.07 4.79
4554 5909 1.481056 CCAACTTCCTCCCTGGTCGT 61.481 60.000 0.00 0.00 37.07 4.34
4555 5910 0.396811 CAACTTCCTCCCTGGTCGTT 59.603 55.000 0.00 0.00 37.07 3.85
4556 5911 0.685660 AACTTCCTCCCTGGTCGTTC 59.314 55.000 0.00 0.00 37.07 3.95
4557 5912 1.215647 CTTCCTCCCTGGTCGTTCG 59.784 63.158 0.00 0.00 37.07 3.95
4558 5913 1.228644 TTCCTCCCTGGTCGTTCGA 60.229 57.895 0.00 0.00 37.07 3.71
4559 5914 1.248785 TTCCTCCCTGGTCGTTCGAG 61.249 60.000 0.00 0.00 37.07 4.04
4560 5915 2.182030 CTCCCTGGTCGTTCGAGC 59.818 66.667 15.84 15.84 0.00 5.03
4561 5916 3.685214 CTCCCTGGTCGTTCGAGCG 62.685 68.421 16.09 16.09 35.63 5.03
4563 5918 4.717629 CCTGGTCGTTCGAGCGCA 62.718 66.667 17.42 9.17 35.63 6.09
4564 5919 2.507102 CTGGTCGTTCGAGCGCAT 60.507 61.111 17.42 0.00 35.63 4.73
4565 5920 2.792290 CTGGTCGTTCGAGCGCATG 61.792 63.158 17.42 0.07 35.63 4.06
4566 5921 2.506217 GGTCGTTCGAGCGCATGA 60.506 61.111 17.42 3.24 0.00 3.07
4567 5922 2.689766 GTCGTTCGAGCGCATGAC 59.310 61.111 17.42 6.07 0.00 3.06
4569 5924 3.902063 CGTTCGAGCGCATGACGG 61.902 66.667 11.47 0.00 43.93 4.79
4570 5925 2.506217 GTTCGAGCGCATGACGGA 60.506 61.111 11.47 1.14 43.93 4.69
4571 5926 2.202610 TTCGAGCGCATGACGGAG 60.203 61.111 11.47 0.00 43.93 4.63
4572 5927 2.696759 TTCGAGCGCATGACGGAGA 61.697 57.895 11.47 0.00 43.93 3.71
4573 5928 2.004808 TTCGAGCGCATGACGGAGAT 62.005 55.000 11.47 0.00 43.93 2.75
4574 5929 2.298629 CGAGCGCATGACGGAGATG 61.299 63.158 11.47 0.00 43.93 2.90
4575 5930 1.953138 GAGCGCATGACGGAGATGG 60.953 63.158 11.47 0.00 43.93 3.51
4576 5931 2.202932 GCGCATGACGGAGATGGT 60.203 61.111 0.30 0.00 43.93 3.55
4577 5932 2.528743 GCGCATGACGGAGATGGTG 61.529 63.158 0.30 0.00 43.93 4.17
4578 5933 1.884464 CGCATGACGGAGATGGTGG 60.884 63.158 0.00 0.00 38.44 4.61
4579 5934 1.522092 GCATGACGGAGATGGTGGA 59.478 57.895 0.00 0.00 0.00 4.02
4580 5935 0.531532 GCATGACGGAGATGGTGGAG 60.532 60.000 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
187 189 4.891727 CGCCCTAAGCATCGCCGT 62.892 66.667 0.00 0.00 44.04 5.68
401 496 5.456921 TGCCCATAAAATCTCTTCCTTCT 57.543 39.130 0.00 0.00 0.00 2.85
500 601 3.314913 ACGCAGAACACAATCAATTCACA 59.685 39.130 0.00 0.00 0.00 3.58
829 970 2.225908 ACACATAAGGTTCCCTCTCCCT 60.226 50.000 0.00 0.00 30.89 4.20
868 1009 7.338703 TCCAACTTGTACACGTTATCTCTATCT 59.661 37.037 16.43 0.00 0.00 1.98
872 1013 5.243283 ACTCCAACTTGTACACGTTATCTCT 59.757 40.000 16.43 0.00 0.00 3.10
873 1014 5.467705 ACTCCAACTTGTACACGTTATCTC 58.532 41.667 16.43 0.00 0.00 2.75
874 1015 5.464030 ACTCCAACTTGTACACGTTATCT 57.536 39.130 16.43 0.00 0.00 1.98
875 1016 4.322804 CGACTCCAACTTGTACACGTTATC 59.677 45.833 16.43 11.05 0.00 1.75
876 1017 4.232221 CGACTCCAACTTGTACACGTTAT 58.768 43.478 16.43 4.25 0.00 1.89
877 1018 3.550639 CCGACTCCAACTTGTACACGTTA 60.551 47.826 16.43 2.90 0.00 3.18
878 1019 2.466846 CGACTCCAACTTGTACACGTT 58.533 47.619 11.66 11.66 0.00 3.99
879 1020 1.269413 CCGACTCCAACTTGTACACGT 60.269 52.381 0.00 0.00 0.00 4.49
902 1043 2.242043 CCAAACAGATCCAAGGTGCTT 58.758 47.619 0.00 0.00 0.00 3.91
913 1054 7.450074 TGACGCTTATATTATCCCAAACAGAT 58.550 34.615 0.00 0.00 0.00 2.90
914 1055 6.822442 TGACGCTTATATTATCCCAAACAGA 58.178 36.000 0.00 0.00 0.00 3.41
923 1064 6.090898 ACGAGGCAATTGACGCTTATATTATC 59.909 38.462 13.47 0.00 0.00 1.75
930 1071 1.075542 CACGAGGCAATTGACGCTTA 58.924 50.000 13.47 0.00 0.00 3.09
931 1072 1.868997 CACGAGGCAATTGACGCTT 59.131 52.632 13.47 0.08 0.00 4.68
932 1073 2.680913 GCACGAGGCAATTGACGCT 61.681 57.895 13.47 0.00 43.97 5.07
933 1074 2.202349 GCACGAGGCAATTGACGC 60.202 61.111 10.34 7.42 43.97 5.19
934 1075 2.096406 CGCACGAGGCAATTGACG 59.904 61.111 10.34 13.26 45.17 4.35
935 1076 2.480555 CCGCACGAGGCAATTGAC 59.519 61.111 10.34 6.35 45.17 3.18
951 1092 0.676736 TGGTTTCAATCCAAACGGCC 59.323 50.000 0.00 0.00 37.16 6.13
980 1121 2.958576 GCCGGAAATTTGGCGTCA 59.041 55.556 5.05 0.00 42.22 4.35
995 1136 1.068954 CGAAAACTGAAGGAAGCTGCC 60.069 52.381 0.73 0.73 0.00 4.85
1008 1149 4.922026 ACGGTGGGCGCGAAAACT 62.922 61.111 12.10 0.00 0.00 2.66
1009 1150 4.676586 CACGGTGGGCGCGAAAAC 62.677 66.667 12.10 3.19 0.00 2.43
1023 1164 2.436646 AAGGAATCTGCCGCCACG 60.437 61.111 0.00 0.00 0.00 4.94
1024 1165 2.409870 CCAAGGAATCTGCCGCCAC 61.410 63.158 0.00 0.00 0.00 5.01
1025 1166 2.045045 CCAAGGAATCTGCCGCCA 60.045 61.111 0.00 0.00 0.00 5.69
1026 1167 3.521796 GCCAAGGAATCTGCCGCC 61.522 66.667 0.00 0.00 0.00 6.13
1027 1168 3.521796 GGCCAAGGAATCTGCCGC 61.522 66.667 0.00 0.00 33.59 6.53
1029 1170 1.197812 AATTGGCCAAGGAATCTGCC 58.802 50.000 24.94 0.00 44.27 4.85
1030 1171 3.339253 AAAATTGGCCAAGGAATCTGC 57.661 42.857 24.94 0.00 0.00 4.26
1062 1203 1.985662 AGTCCGCCCCGTCAATGTA 60.986 57.895 0.00 0.00 0.00 2.29
1082 1223 1.153249 TCCGATTTGGATCACGCCC 60.153 57.895 0.00 0.00 43.74 6.13
1120 1261 4.277423 TCCGCTTGATCGATCTGTTATGTA 59.723 41.667 25.02 0.22 0.00 2.29
1136 1277 1.349627 CTGCTATTGCGTCCGCTTG 59.650 57.895 13.31 1.97 43.34 4.01
1137 1278 2.464459 GCTGCTATTGCGTCCGCTT 61.464 57.895 13.31 3.32 43.34 4.68
1162 1303 3.255888 CAGGGTTTCTTGCTTAGGGTTTC 59.744 47.826 0.00 0.00 0.00 2.78
1163 1304 3.117284 TCAGGGTTTCTTGCTTAGGGTTT 60.117 43.478 0.00 0.00 0.00 3.27
1164 1305 2.445525 TCAGGGTTTCTTGCTTAGGGTT 59.554 45.455 0.00 0.00 0.00 4.11
1165 1306 2.062636 TCAGGGTTTCTTGCTTAGGGT 58.937 47.619 0.00 0.00 0.00 4.34
1166 1307 2.879103 TCAGGGTTTCTTGCTTAGGG 57.121 50.000 0.00 0.00 0.00 3.53
1167 1308 3.445096 CCAATCAGGGTTTCTTGCTTAGG 59.555 47.826 0.00 0.00 0.00 2.69
1168 1309 4.082125 ACCAATCAGGGTTTCTTGCTTAG 58.918 43.478 0.00 0.00 43.89 2.18
1169 1310 4.079253 GACCAATCAGGGTTTCTTGCTTA 58.921 43.478 0.00 0.00 42.53 3.09
1170 1311 2.893489 GACCAATCAGGGTTTCTTGCTT 59.107 45.455 0.00 0.00 42.53 3.91
1171 1312 2.519013 GACCAATCAGGGTTTCTTGCT 58.481 47.619 0.00 0.00 42.53 3.91
1172 1313 1.200020 CGACCAATCAGGGTTTCTTGC 59.800 52.381 0.00 0.00 42.53 4.01
1173 1314 2.744202 CTCGACCAATCAGGGTTTCTTG 59.256 50.000 0.00 0.00 42.53 3.02
1174 1315 2.876079 GCTCGACCAATCAGGGTTTCTT 60.876 50.000 0.00 0.00 42.53 2.52
1175 1316 1.339151 GCTCGACCAATCAGGGTTTCT 60.339 52.381 0.00 0.00 42.53 2.52
1261 1455 3.517100 CCTCCTTCTTCTCCATCAACTCA 59.483 47.826 0.00 0.00 0.00 3.41
1309 1536 1.942657 CCATATGTCCGCTTGTCCTTG 59.057 52.381 1.24 0.00 0.00 3.61
1313 1540 0.468226 TCCCCATATGTCCGCTTGTC 59.532 55.000 1.24 0.00 0.00 3.18
1339 1581 1.337823 CCTTCACGGTGTTCCTCGATT 60.338 52.381 8.17 0.00 0.00 3.34
1342 1584 2.027625 GCCTTCACGGTGTTCCTCG 61.028 63.158 8.17 0.00 34.25 4.63
1383 1625 4.382320 CGACGGGGGAAGGCGAAA 62.382 66.667 0.00 0.00 44.04 3.46
1418 1660 5.532406 TCAGTGGAAGAAAATTTGGAGTCAG 59.468 40.000 0.00 0.00 0.00 3.51
1439 1681 6.414408 AGCTTTGTTCGTAGATTCATTCAG 57.586 37.500 0.00 0.00 35.04 3.02
1608 1850 8.934023 AAAGGTCACTTTTCATTATGTTCCTA 57.066 30.769 0.00 0.00 44.26 2.94
1840 2726 1.553706 TTACTCCCTCCGTCAAGTCC 58.446 55.000 0.00 0.00 0.00 3.85
1861 2747 9.816354 AACAGAAAAACACAATATTAGCTTGTT 57.184 25.926 0.00 0.00 34.69 2.83
2050 2952 6.188407 TCCAGGGTAAGAAGATAGGATATCG 58.812 44.000 0.00 0.00 0.00 2.92
2064 2972 7.782897 TCAATATACTCTCATCCAGGGTAAG 57.217 40.000 0.00 0.00 41.75 2.34
2065 2973 8.742125 ATTCAATATACTCTCATCCAGGGTAA 57.258 34.615 0.00 0.00 41.75 2.85
2066 2974 8.597167 CAATTCAATATACTCTCATCCAGGGTA 58.403 37.037 0.00 0.00 42.69 3.69
2123 3041 3.964031 GCCATATAGATAGGGACAGAGGG 59.036 52.174 4.42 0.00 36.34 4.30
2140 3058 0.916086 ATGGAAACGAGGGTGCCATA 59.084 50.000 0.00 0.00 39.19 2.74
2294 3213 7.112287 CACGCGTATTTTGTGATTCAACTTTAA 59.888 33.333 13.44 0.00 35.61 1.52
2295 3214 6.575572 CACGCGTATTTTGTGATTCAACTTTA 59.424 34.615 13.44 0.00 35.61 1.85
2296 3215 5.398122 CACGCGTATTTTGTGATTCAACTTT 59.602 36.000 13.44 0.00 35.61 2.66
2326 3245 3.035363 TGCTCCATCGTCCCTATTTACA 58.965 45.455 0.00 0.00 0.00 2.41
2493 3449 0.698238 AAACCTGCAGTGGCCAGATA 59.302 50.000 5.11 0.00 40.13 1.98
2556 3512 3.135348 CCCTGGTGCATCTGAAGAGATAA 59.865 47.826 5.27 0.00 36.75 1.75
2643 3613 6.150140 AGGCAGCAAGAGAATTAAGTTAACAG 59.850 38.462 8.61 0.00 0.00 3.16
2710 3840 9.760660 CTATTAAAAAGAAGTTGAATCAGGACG 57.239 33.333 0.00 0.00 0.00 4.79
2738 3868 9.904198 AATAAAAATTAATTAGTTGCCTGCCAT 57.096 25.926 0.01 0.00 0.00 4.40
2759 3891 4.566987 TGCAATGCAAGCATCACAATAAA 58.433 34.783 5.01 0.00 37.02 1.40
2911 4043 7.714813 TCAAAAGGAAAAAGTTGATGGAAATCC 59.285 33.333 0.00 0.00 0.00 3.01
2944 4076 7.924412 GGAATAGGTCTTCGTATCACATGTTTA 59.076 37.037 0.00 0.00 0.00 2.01
3093 4225 3.705072 CCCTCCTTTTACACTCTCGGTAT 59.295 47.826 0.00 0.00 0.00 2.73
3100 4232 2.814336 CACTTGCCCTCCTTTTACACTC 59.186 50.000 0.00 0.00 0.00 3.51
3116 4248 2.806608 AAATCAAGCAGCACCACTTG 57.193 45.000 0.00 0.00 43.73 3.16
3277 4410 1.741706 CCTGACGCTTGCATCTCAAAT 59.258 47.619 0.00 0.00 33.65 2.32
3319 4455 4.952335 ACCTCCATCTTGCAGAAAATAAGG 59.048 41.667 0.00 0.00 0.00 2.69
3385 4521 3.888323 TGAATTGTTCAACAGCTGGCTAA 59.112 39.130 19.93 5.72 36.59 3.09
3422 4584 5.425539 AGGCATGTAGAGTGTACCATAACTT 59.574 40.000 0.00 0.00 0.00 2.66
3434 4596 5.706447 TCAACTAGGATAGGCATGTAGAGT 58.294 41.667 0.00 0.00 44.97 3.24
3435 4597 6.849085 ATCAACTAGGATAGGCATGTAGAG 57.151 41.667 0.00 0.00 44.97 2.43
3439 4601 8.220559 ACAATTAATCAACTAGGATAGGCATGT 58.779 33.333 0.00 0.00 44.97 3.21
3443 4605 8.451908 AACACAATTAATCAACTAGGATAGGC 57.548 34.615 0.00 0.00 44.97 3.93
3457 4619 6.318648 ACCACATATCAGCGAACACAATTAAT 59.681 34.615 0.00 0.00 0.00 1.40
3464 4626 2.346803 ACACCACATATCAGCGAACAC 58.653 47.619 0.00 0.00 0.00 3.32
3551 4746 7.582667 AGCTTAACTTTCACAAACAAGGTAT 57.417 32.000 0.00 0.00 0.00 2.73
3558 4753 9.908152 ATACCAATAAGCTTAACTTTCACAAAC 57.092 29.630 10.85 0.00 39.97 2.93
3565 4760 7.578763 GCACCCAATACCAATAAGCTTAACTTT 60.579 37.037 10.85 0.00 39.97 2.66
3586 4781 3.995048 GAGTTCTACACAACTTAGCACCC 59.005 47.826 0.00 0.00 36.71 4.61
3594 4789 3.070018 GCATGCAGAGTTCTACACAACT 58.930 45.455 14.21 0.00 39.43 3.16
3595 4790 2.807967 TGCATGCAGAGTTCTACACAAC 59.192 45.455 18.46 0.00 0.00 3.32
3603 4950 1.242076 ACCAACTGCATGCAGAGTTC 58.758 50.000 45.50 5.97 46.30 3.01
3647 4994 2.030946 GCAACCTCGACAGAACATATGC 59.969 50.000 1.58 0.00 0.00 3.14
3729 5076 6.890268 GGTTTTAATCATGTTAGGGAAGGACT 59.110 38.462 0.00 0.00 0.00 3.85
3739 5086 8.929827 TCGATAACTCGGTTTTAATCATGTTA 57.070 30.769 0.00 0.00 45.10 2.41
3753 5100 1.323534 CGGCTTTGTTCGATAACTCGG 59.676 52.381 0.00 0.00 45.10 4.63
3755 5102 1.062148 GCCGGCTTTGTTCGATAACTC 59.938 52.381 22.15 0.00 36.51 3.01
3759 5106 1.079681 ACGCCGGCTTTGTTCGATA 60.080 52.632 26.68 0.00 0.00 2.92
3795 5142 1.272554 GGGACCCAGTGGAACCCTAG 61.273 65.000 26.19 7.00 43.36 3.02
3819 5166 7.743749 ACCTATTAGGACGATAGAAGACAGTA 58.256 38.462 16.80 0.00 37.67 2.74
3863 5210 7.439157 TTGTCGTCTGAATCAGAAAAATCAT 57.561 32.000 15.28 0.00 42.46 2.45
3878 5225 8.606602 TGAAAATAATGATCTGATTGTCGTCTG 58.393 33.333 0.00 0.00 0.00 3.51
3892 5241 6.378280 ACTTTCCCGAGCTTGAAAATAATGAT 59.622 34.615 1.22 0.00 30.65 2.45
3924 5273 1.153745 GAGCGTGTACCTGAGCTGG 60.154 63.158 0.00 0.00 40.39 4.85
3947 5302 1.065418 ACAACAAGAATAGGAGGGCGG 60.065 52.381 0.00 0.00 0.00 6.13
3950 5305 5.121811 CAGATCACAACAAGAATAGGAGGG 58.878 45.833 0.00 0.00 0.00 4.30
3953 5308 4.937620 GCACAGATCACAACAAGAATAGGA 59.062 41.667 0.00 0.00 0.00 2.94
3965 5320 2.046988 CCCAGCGCACAGATCACA 60.047 61.111 11.47 0.00 0.00 3.58
3966 5321 2.103042 GTCCCAGCGCACAGATCAC 61.103 63.158 11.47 0.00 0.00 3.06
3977 5332 2.267324 GCTCCAGTCTGTCCCAGC 59.733 66.667 0.00 0.00 0.00 4.85
4083 5438 8.023706 AGAAAACGAGATCTAAAAAGGAAATGC 58.976 33.333 0.00 0.00 0.00 3.56
4092 5447 9.180678 GCAAAAATGAGAAAACGAGATCTAAAA 57.819 29.630 0.00 0.00 0.00 1.52
4100 5455 7.678194 TTTAGTGCAAAAATGAGAAAACGAG 57.322 32.000 0.00 0.00 0.00 4.18
4101 5456 8.538856 CAATTTAGTGCAAAAATGAGAAAACGA 58.461 29.630 8.59 0.00 0.00 3.85
4102 5457 7.793427 CCAATTTAGTGCAAAAATGAGAAAACG 59.207 33.333 8.59 0.00 0.00 3.60
4103 5458 8.825745 TCCAATTTAGTGCAAAAATGAGAAAAC 58.174 29.630 8.59 0.00 0.00 2.43
4104 5459 8.954950 TCCAATTTAGTGCAAAAATGAGAAAA 57.045 26.923 8.59 0.00 0.00 2.29
4105 5460 8.420222 TCTCCAATTTAGTGCAAAAATGAGAAA 58.580 29.630 15.97 2.61 30.38 2.52
4106 5461 7.950512 TCTCCAATTTAGTGCAAAAATGAGAA 58.049 30.769 15.97 6.96 30.38 2.87
4107 5462 7.523293 TCTCCAATTTAGTGCAAAAATGAGA 57.477 32.000 15.11 15.11 30.62 3.27
4108 5463 8.248945 AGATCTCCAATTTAGTGCAAAAATGAG 58.751 33.333 8.59 10.86 0.00 2.90
4109 5464 8.125978 AGATCTCCAATTTAGTGCAAAAATGA 57.874 30.769 8.59 3.58 0.00 2.57
4110 5465 8.653338 CAAGATCTCCAATTTAGTGCAAAAATG 58.347 33.333 8.59 1.40 0.00 2.32
4111 5466 7.820872 CCAAGATCTCCAATTTAGTGCAAAAAT 59.179 33.333 0.00 0.00 0.00 1.82
4112 5467 7.015098 TCCAAGATCTCCAATTTAGTGCAAAAA 59.985 33.333 0.00 0.00 0.00 1.94
4113 5468 6.493115 TCCAAGATCTCCAATTTAGTGCAAAA 59.507 34.615 0.00 0.00 0.00 2.44
4114 5469 6.009589 TCCAAGATCTCCAATTTAGTGCAAA 58.990 36.000 0.00 0.00 0.00 3.68
4115 5470 5.569355 TCCAAGATCTCCAATTTAGTGCAA 58.431 37.500 0.00 0.00 0.00 4.08
4116 5471 5.178096 TCCAAGATCTCCAATTTAGTGCA 57.822 39.130 0.00 0.00 0.00 4.57
4117 5472 4.578105 CCTCCAAGATCTCCAATTTAGTGC 59.422 45.833 0.00 0.00 0.00 4.40
4118 5473 5.994250 TCCTCCAAGATCTCCAATTTAGTG 58.006 41.667 0.00 0.00 0.00 2.74
4119 5474 6.599445 CATCCTCCAAGATCTCCAATTTAGT 58.401 40.000 0.00 0.00 0.00 2.24
4120 5475 5.472820 GCATCCTCCAAGATCTCCAATTTAG 59.527 44.000 0.00 0.00 0.00 1.85
4121 5476 5.380043 GCATCCTCCAAGATCTCCAATTTA 58.620 41.667 0.00 0.00 0.00 1.40
4122 5477 4.213513 GCATCCTCCAAGATCTCCAATTT 58.786 43.478 0.00 0.00 0.00 1.82
4123 5478 3.436180 GGCATCCTCCAAGATCTCCAATT 60.436 47.826 0.00 0.00 0.00 2.32
4124 5479 2.107901 GGCATCCTCCAAGATCTCCAAT 59.892 50.000 0.00 0.00 0.00 3.16
4125 5480 1.492176 GGCATCCTCCAAGATCTCCAA 59.508 52.381 0.00 0.00 0.00 3.53
4126 5481 1.135094 GGCATCCTCCAAGATCTCCA 58.865 55.000 0.00 0.00 0.00 3.86
4127 5482 0.034616 CGGCATCCTCCAAGATCTCC 59.965 60.000 0.00 0.00 0.00 3.71
4128 5483 0.602372 GCGGCATCCTCCAAGATCTC 60.602 60.000 0.00 0.00 0.00 2.75
4129 5484 1.053264 AGCGGCATCCTCCAAGATCT 61.053 55.000 1.45 0.00 0.00 2.75
4130 5485 0.179034 AAGCGGCATCCTCCAAGATC 60.179 55.000 1.45 0.00 0.00 2.75
4131 5486 0.179034 GAAGCGGCATCCTCCAAGAT 60.179 55.000 1.45 0.00 0.00 2.40
4132 5487 1.221840 GAAGCGGCATCCTCCAAGA 59.778 57.895 1.45 0.00 0.00 3.02
4133 5488 2.176273 CGAAGCGGCATCCTCCAAG 61.176 63.158 1.45 0.00 0.00 3.61
4134 5489 2.125147 CGAAGCGGCATCCTCCAA 60.125 61.111 1.45 0.00 0.00 3.53
4135 5490 3.074369 TCGAAGCGGCATCCTCCA 61.074 61.111 1.45 0.00 0.00 3.86
4136 5491 2.586357 GTCGAAGCGGCATCCTCC 60.586 66.667 1.45 0.00 0.00 4.30
4137 5492 2.167861 GTGTCGAAGCGGCATCCTC 61.168 63.158 1.45 0.00 45.01 3.71
4138 5493 2.125512 GTGTCGAAGCGGCATCCT 60.126 61.111 1.45 0.00 45.01 3.24
4139 5494 3.554692 CGTGTCGAAGCGGCATCC 61.555 66.667 1.45 0.00 45.01 3.51
4140 5495 4.210304 GCGTGTCGAAGCGGCATC 62.210 66.667 1.45 0.00 45.01 3.91
4141 5496 4.742201 AGCGTGTCGAAGCGGCAT 62.742 61.111 1.45 0.00 45.01 4.40
4142 5497 4.961511 AAGCGTGTCGAAGCGGCA 62.962 61.111 1.45 0.00 39.83 5.69
4143 5498 4.135493 GAAGCGTGTCGAAGCGGC 62.135 66.667 11.05 0.00 38.61 6.53
4144 5499 3.827784 CGAAGCGTGTCGAAGCGG 61.828 66.667 11.05 0.00 43.86 5.52
4145 5500 2.799502 TCGAAGCGTGTCGAAGCG 60.800 61.111 9.66 5.63 46.52 4.68
4150 5505 4.104633 GCGTGTCGAAGCGTGTCG 62.105 66.667 10.78 3.81 42.48 4.35
4151 5506 2.729862 AGCGTGTCGAAGCGTGTC 60.730 61.111 10.78 0.00 38.61 3.67
4152 5507 3.030308 CAGCGTGTCGAAGCGTGT 61.030 61.111 10.78 0.00 38.61 4.49
4153 5508 4.415501 GCAGCGTGTCGAAGCGTG 62.416 66.667 10.78 8.93 38.61 5.34
4156 5511 3.832171 CTCGCAGCGTGTCGAAGC 61.832 66.667 15.93 0.00 34.07 3.86
4157 5512 1.515088 ATCTCGCAGCGTGTCGAAG 60.515 57.895 15.93 3.40 34.07 3.79
4158 5513 1.801512 CATCTCGCAGCGTGTCGAA 60.802 57.895 15.93 0.00 34.07 3.71
4159 5514 2.202479 CATCTCGCAGCGTGTCGA 60.202 61.111 15.93 7.91 0.00 4.20
4160 5515 3.906649 GCATCTCGCAGCGTGTCG 61.907 66.667 15.93 9.07 41.79 4.35
4161 5516 3.558411 GGCATCTCGCAGCGTGTC 61.558 66.667 15.93 3.36 45.17 3.67
4188 5543 3.041940 GAACTGCACCGACCACCG 61.042 66.667 0.00 0.00 38.18 4.94
4189 5544 3.041940 CGAACTGCACCGACCACC 61.042 66.667 0.00 0.00 0.00 4.61
4190 5545 3.712881 GCGAACTGCACCGACCAC 61.713 66.667 2.98 0.00 45.45 4.16
4200 5555 2.956964 GAGATCGGCGGCGAACTG 60.957 66.667 40.65 11.68 0.00 3.16
4201 5556 2.501223 TTTGAGATCGGCGGCGAACT 62.501 55.000 37.36 37.36 0.00 3.01
4202 5557 1.429148 ATTTGAGATCGGCGGCGAAC 61.429 55.000 37.73 33.54 0.00 3.95
4203 5558 1.151777 GATTTGAGATCGGCGGCGAA 61.152 55.000 37.73 20.88 0.00 4.70
4204 5559 1.591594 GATTTGAGATCGGCGGCGA 60.592 57.895 36.40 36.40 0.00 5.54
4205 5560 2.931386 GATTTGAGATCGGCGGCG 59.069 61.111 27.15 27.15 0.00 6.46
4206 5561 2.931386 CGATTTGAGATCGGCGGC 59.069 61.111 7.21 0.00 37.84 6.53
4211 5566 1.927210 CGCCACCGATTTGAGATCG 59.073 57.895 0.00 0.00 40.86 3.69
4212 5567 1.643832 GCGCCACCGATTTGAGATC 59.356 57.895 0.00 0.00 36.29 2.75
4213 5568 2.173669 CGCGCCACCGATTTGAGAT 61.174 57.895 0.00 0.00 36.29 2.75
4214 5569 2.813474 CGCGCCACCGATTTGAGA 60.813 61.111 0.00 0.00 36.29 3.27
4215 5570 3.864686 CCGCGCCACCGATTTGAG 61.865 66.667 0.00 0.00 36.29 3.02
4227 5582 2.407616 GTGGATTTTAGGCCGCGC 59.592 61.111 0.00 0.00 0.00 6.86
4228 5583 2.819552 CGGTGGATTTTAGGCCGCG 61.820 63.158 0.00 0.00 35.90 6.46
4229 5584 1.747745 ACGGTGGATTTTAGGCCGC 60.748 57.895 0.00 0.00 45.53 6.53
4230 5585 1.373590 CCACGGTGGATTTTAGGCCG 61.374 60.000 22.77 0.00 40.96 6.13
4231 5586 1.663379 GCCACGGTGGATTTTAGGCC 61.663 60.000 30.65 5.63 40.96 5.19
4232 5587 1.807226 GCCACGGTGGATTTTAGGC 59.193 57.895 30.65 8.75 40.96 3.93
4233 5588 0.675522 ACGCCACGGTGGATTTTAGG 60.676 55.000 30.65 11.40 40.96 2.69
4234 5589 0.446222 CACGCCACGGTGGATTTTAG 59.554 55.000 30.65 14.69 40.96 1.85
4235 5590 2.545875 CACGCCACGGTGGATTTTA 58.454 52.632 30.65 0.00 40.96 1.52
4236 5591 3.350377 CACGCCACGGTGGATTTT 58.650 55.556 30.65 7.83 40.96 1.82
4265 5620 2.622903 ATATCGTCGCGGTGTGTGGG 62.623 60.000 6.13 0.00 0.00 4.61
4266 5621 0.804544 AATATCGTCGCGGTGTGTGG 60.805 55.000 6.13 0.00 0.00 4.17
4267 5622 0.570734 GAATATCGTCGCGGTGTGTG 59.429 55.000 6.13 0.00 0.00 3.82
4268 5623 0.526954 GGAATATCGTCGCGGTGTGT 60.527 55.000 6.13 0.00 0.00 3.72
4269 5624 0.248907 AGGAATATCGTCGCGGTGTG 60.249 55.000 6.13 0.00 0.00 3.82
4270 5625 0.248907 CAGGAATATCGTCGCGGTGT 60.249 55.000 6.13 0.00 0.00 4.16
4271 5626 0.939577 CCAGGAATATCGTCGCGGTG 60.940 60.000 6.13 0.00 0.00 4.94
4272 5627 1.362717 CCAGGAATATCGTCGCGGT 59.637 57.895 6.13 0.00 0.00 5.68
4273 5628 0.249322 AACCAGGAATATCGTCGCGG 60.249 55.000 6.13 0.00 0.00 6.46
4274 5629 0.852777 CAACCAGGAATATCGTCGCG 59.147 55.000 0.00 0.00 0.00 5.87
4275 5630 1.859080 GTCAACCAGGAATATCGTCGC 59.141 52.381 0.00 0.00 0.00 5.19
4276 5631 2.117137 CGTCAACCAGGAATATCGTCG 58.883 52.381 0.00 0.00 0.00 5.12
4277 5632 3.372954 CTCGTCAACCAGGAATATCGTC 58.627 50.000 0.00 0.00 0.00 4.20
4278 5633 2.481449 GCTCGTCAACCAGGAATATCGT 60.481 50.000 0.00 0.00 0.00 3.73
4279 5634 2.128035 GCTCGTCAACCAGGAATATCG 58.872 52.381 0.00 0.00 0.00 2.92
4280 5635 2.128035 CGCTCGTCAACCAGGAATATC 58.872 52.381 0.00 0.00 0.00 1.63
4281 5636 1.806623 GCGCTCGTCAACCAGGAATAT 60.807 52.381 0.00 0.00 0.00 1.28
4282 5637 0.459585 GCGCTCGTCAACCAGGAATA 60.460 55.000 0.00 0.00 0.00 1.75
4283 5638 1.741770 GCGCTCGTCAACCAGGAAT 60.742 57.895 0.00 0.00 0.00 3.01
4284 5639 2.357034 GCGCTCGTCAACCAGGAA 60.357 61.111 0.00 0.00 0.00 3.36
4285 5640 4.717629 CGCGCTCGTCAACCAGGA 62.718 66.667 5.56 0.00 0.00 3.86
4301 5656 4.920112 TTGTCCACCGTGCACCCG 62.920 66.667 12.15 3.95 0.00 5.28
4302 5657 2.978010 CTTGTCCACCGTGCACCC 60.978 66.667 12.15 0.00 0.00 4.61
4303 5658 3.660111 GCTTGTCCACCGTGCACC 61.660 66.667 12.15 0.00 0.00 5.01
4304 5659 4.012895 CGCTTGTCCACCGTGCAC 62.013 66.667 6.82 6.82 0.00 4.57
4307 5662 3.041940 GACCGCTTGTCCACCGTG 61.042 66.667 0.00 0.00 38.09 4.94
4308 5663 4.657824 CGACCGCTTGTCCACCGT 62.658 66.667 0.00 0.00 41.18 4.83
4311 5666 3.934391 CTCCCGACCGCTTGTCCAC 62.934 68.421 0.00 0.00 41.18 4.02
4312 5667 3.691342 CTCCCGACCGCTTGTCCA 61.691 66.667 0.00 0.00 41.18 4.02
4313 5668 4.452733 CCTCCCGACCGCTTGTCC 62.453 72.222 0.00 0.00 41.18 4.02
4324 5679 4.692475 AAACGAACCCGCCTCCCG 62.692 66.667 0.00 0.00 39.95 5.14
4325 5680 2.281970 AAAACGAACCCGCCTCCC 60.282 61.111 0.00 0.00 39.95 4.30
4326 5681 1.574702 CTCAAAACGAACCCGCCTCC 61.575 60.000 0.00 0.00 39.95 4.30
4327 5682 1.866925 CTCAAAACGAACCCGCCTC 59.133 57.895 0.00 0.00 39.95 4.70
4328 5683 2.258726 GCTCAAAACGAACCCGCCT 61.259 57.895 0.00 0.00 39.95 5.52
4329 5684 2.254350 GCTCAAAACGAACCCGCC 59.746 61.111 0.00 0.00 39.95 6.13
4330 5685 2.254350 GGCTCAAAACGAACCCGC 59.746 61.111 0.00 0.00 39.95 6.13
4331 5686 2.951458 GGGCTCAAAACGAACCCG 59.049 61.111 0.00 0.00 40.27 5.28
4332 5687 2.622962 CCGGGCTCAAAACGAACCC 61.623 63.158 0.00 0.00 45.50 4.11
4333 5688 2.622962 CCCGGGCTCAAAACGAACC 61.623 63.158 8.08 0.00 0.00 3.62
4334 5689 2.622962 CCCCGGGCTCAAAACGAAC 61.623 63.158 17.73 0.00 0.00 3.95
4335 5690 2.281900 CCCCGGGCTCAAAACGAA 60.282 61.111 17.73 0.00 0.00 3.85
4336 5691 4.338710 CCCCCGGGCTCAAAACGA 62.339 66.667 17.73 0.00 0.00 3.85
4363 5718 3.353836 CAACGTGGCAGGGGAACG 61.354 66.667 12.33 1.52 42.82 3.95
4364 5719 3.670377 GCAACGTGGCAGGGGAAC 61.670 66.667 10.88 0.00 0.00 3.62
4374 5729 4.833561 CTCGATGCGCGCAACGTG 62.834 66.667 46.11 41.79 46.11 4.49
4377 5732 3.918220 CTCCTCGATGCGCGCAAC 61.918 66.667 39.68 33.89 40.61 4.17
4378 5733 3.641159 TTCTCCTCGATGCGCGCAA 62.641 57.895 39.68 21.57 40.61 4.85
4379 5734 4.128388 TTCTCCTCGATGCGCGCA 62.128 61.111 38.27 38.27 40.61 6.09
4380 5735 3.621394 GTTCTCCTCGATGCGCGC 61.621 66.667 27.26 27.26 40.61 6.86
4381 5736 1.543941 GATGTTCTCCTCGATGCGCG 61.544 60.000 0.00 0.00 42.69 6.86
4382 5737 0.528466 TGATGTTCTCCTCGATGCGC 60.528 55.000 0.00 0.00 0.00 6.09
4383 5738 1.203928 GTGATGTTCTCCTCGATGCG 58.796 55.000 0.00 0.00 0.00 4.73
4384 5739 1.576356 GGTGATGTTCTCCTCGATGC 58.424 55.000 0.00 0.00 0.00 3.91
4385 5740 1.536922 CCGGTGATGTTCTCCTCGATG 60.537 57.143 0.00 0.00 0.00 3.84
4386 5741 0.747255 CCGGTGATGTTCTCCTCGAT 59.253 55.000 0.00 0.00 0.00 3.59
4387 5742 1.945354 GCCGGTGATGTTCTCCTCGA 61.945 60.000 1.90 0.00 0.00 4.04
4388 5743 1.519455 GCCGGTGATGTTCTCCTCG 60.519 63.158 1.90 0.00 0.00 4.63
4389 5744 1.519455 CGCCGGTGATGTTCTCCTC 60.519 63.158 10.20 0.00 0.00 3.71
4390 5745 2.579201 CGCCGGTGATGTTCTCCT 59.421 61.111 10.20 0.00 0.00 3.69
4391 5746 2.511600 CCGCCGGTGATGTTCTCC 60.512 66.667 18.79 0.00 0.00 3.71
4392 5747 2.511600 CCCGCCGGTGATGTTCTC 60.512 66.667 18.79 0.00 0.00 2.87
4393 5748 4.096003 CCCCGCCGGTGATGTTCT 62.096 66.667 18.79 0.00 0.00 3.01
4409 5764 3.407967 TCTCCCGATGCAACCCCC 61.408 66.667 0.00 0.00 0.00 5.40
4410 5765 2.124695 GTCTCCCGATGCAACCCC 60.125 66.667 0.00 0.00 0.00 4.95
4411 5766 2.511600 CGTCTCCCGATGCAACCC 60.512 66.667 0.00 0.00 39.56 4.11
4412 5767 2.511600 CCGTCTCCCGATGCAACC 60.512 66.667 0.00 0.00 39.56 3.77
4413 5768 3.195698 GCCGTCTCCCGATGCAAC 61.196 66.667 0.00 0.00 39.56 4.17
4414 5769 4.812476 CGCCGTCTCCCGATGCAA 62.812 66.667 0.00 0.00 39.56 4.08
4417 5772 4.907034 CGTCGCCGTCTCCCGATG 62.907 72.222 0.00 0.00 39.56 3.84
4422 5777 2.280823 ATTTCTCCGTCGCCGTCTCC 62.281 60.000 0.00 0.00 0.00 3.71
4423 5778 0.458025 AATTTCTCCGTCGCCGTCTC 60.458 55.000 0.00 0.00 0.00 3.36
4424 5779 0.736325 CAATTTCTCCGTCGCCGTCT 60.736 55.000 0.00 0.00 0.00 4.18
4425 5780 1.012486 ACAATTTCTCCGTCGCCGTC 61.012 55.000 0.00 0.00 0.00 4.79
4426 5781 1.005394 ACAATTTCTCCGTCGCCGT 60.005 52.632 0.00 0.00 0.00 5.68
4427 5782 1.419922 CACAATTTCTCCGTCGCCG 59.580 57.895 0.00 0.00 0.00 6.46
4428 5783 1.794222 CCACAATTTCTCCGTCGCC 59.206 57.895 0.00 0.00 0.00 5.54
4429 5784 1.134694 GCCACAATTTCTCCGTCGC 59.865 57.895 0.00 0.00 0.00 5.19
4430 5785 0.443869 CAGCCACAATTTCTCCGTCG 59.556 55.000 0.00 0.00 0.00 5.12
4431 5786 0.804989 CCAGCCACAATTTCTCCGTC 59.195 55.000 0.00 0.00 0.00 4.79
4432 5787 0.110486 ACCAGCCACAATTTCTCCGT 59.890 50.000 0.00 0.00 0.00 4.69
4433 5788 0.523072 CACCAGCCACAATTTCTCCG 59.477 55.000 0.00 0.00 0.00 4.63
4434 5789 0.890683 CCACCAGCCACAATTTCTCC 59.109 55.000 0.00 0.00 0.00 3.71
4435 5790 0.890683 CCCACCAGCCACAATTTCTC 59.109 55.000 0.00 0.00 0.00 2.87
4436 5791 0.542702 CCCCACCAGCCACAATTTCT 60.543 55.000 0.00 0.00 0.00 2.52
4437 5792 1.543944 CCCCCACCAGCCACAATTTC 61.544 60.000 0.00 0.00 0.00 2.17
4438 5793 1.536174 CCCCCACCAGCCACAATTT 60.536 57.895 0.00 0.00 0.00 1.82
4439 5794 2.120274 CCCCCACCAGCCACAATT 59.880 61.111 0.00 0.00 0.00 2.32
4440 5795 3.192630 ACCCCCACCAGCCACAAT 61.193 61.111 0.00 0.00 0.00 2.71
4441 5796 4.217210 CACCCCCACCAGCCACAA 62.217 66.667 0.00 0.00 0.00 3.33
4446 5801 2.706952 TTAACTGCACCCCCACCAGC 62.707 60.000 0.00 0.00 0.00 4.85
4447 5802 0.609131 CTTAACTGCACCCCCACCAG 60.609 60.000 0.00 0.00 0.00 4.00
4448 5803 1.458486 CTTAACTGCACCCCCACCA 59.542 57.895 0.00 0.00 0.00 4.17
4449 5804 1.304134 CCTTAACTGCACCCCCACC 60.304 63.158 0.00 0.00 0.00 4.61
4450 5805 0.893727 CACCTTAACTGCACCCCCAC 60.894 60.000 0.00 0.00 0.00 4.61
4451 5806 1.458486 CACCTTAACTGCACCCCCA 59.542 57.895 0.00 0.00 0.00 4.96
4452 5807 1.304134 CCACCTTAACTGCACCCCC 60.304 63.158 0.00 0.00 0.00 5.40
4453 5808 0.322546 CTCCACCTTAACTGCACCCC 60.323 60.000 0.00 0.00 0.00 4.95
4454 5809 0.690762 TCTCCACCTTAACTGCACCC 59.309 55.000 0.00 0.00 0.00 4.61
4455 5810 1.623811 TCTCTCCACCTTAACTGCACC 59.376 52.381 0.00 0.00 0.00 5.01
4456 5811 3.006967 TCTTCTCTCCACCTTAACTGCAC 59.993 47.826 0.00 0.00 0.00 4.57
4457 5812 3.239449 TCTTCTCTCCACCTTAACTGCA 58.761 45.455 0.00 0.00 0.00 4.41
4458 5813 3.963428 TCTTCTCTCCACCTTAACTGC 57.037 47.619 0.00 0.00 0.00 4.40
4459 5814 6.042638 TGAATCTTCTCTCCACCTTAACTG 57.957 41.667 0.00 0.00 0.00 3.16
4460 5815 6.019748 TCTGAATCTTCTCTCCACCTTAACT 58.980 40.000 0.00 0.00 0.00 2.24
4461 5816 6.287589 TCTGAATCTTCTCTCCACCTTAAC 57.712 41.667 0.00 0.00 0.00 2.01
4462 5817 6.183360 CGATCTGAATCTTCTCTCCACCTTAA 60.183 42.308 0.00 0.00 0.00 1.85
4463 5818 5.300539 CGATCTGAATCTTCTCTCCACCTTA 59.699 44.000 0.00 0.00 0.00 2.69
4464 5819 4.099266 CGATCTGAATCTTCTCTCCACCTT 59.901 45.833 0.00 0.00 0.00 3.50
4465 5820 3.636300 CGATCTGAATCTTCTCTCCACCT 59.364 47.826 0.00 0.00 0.00 4.00
4466 5821 3.634448 TCGATCTGAATCTTCTCTCCACC 59.366 47.826 0.00 0.00 0.00 4.61
4467 5822 4.578516 TCTCGATCTGAATCTTCTCTCCAC 59.421 45.833 0.00 0.00 0.00 4.02
4468 5823 4.786425 TCTCGATCTGAATCTTCTCTCCA 58.214 43.478 0.00 0.00 0.00 3.86
4469 5824 5.707298 AGATCTCGATCTGAATCTTCTCTCC 59.293 44.000 8.55 0.00 45.77 3.71
4470 5825 6.808008 AGATCTCGATCTGAATCTTCTCTC 57.192 41.667 8.55 0.00 45.77 3.20
4483 5838 1.944024 ACGTCTGACCAGATCTCGATC 59.056 52.381 13.13 0.00 39.97 3.69
4484 5839 2.045561 ACGTCTGACCAGATCTCGAT 57.954 50.000 13.13 0.00 39.97 3.59
4485 5840 1.822506 AACGTCTGACCAGATCTCGA 58.177 50.000 13.13 0.00 39.97 4.04
4486 5841 2.520979 GAAACGTCTGACCAGATCTCG 58.479 52.381 2.78 5.18 39.97 4.04
4487 5842 2.882324 GGAAACGTCTGACCAGATCTC 58.118 52.381 2.78 0.00 39.97 2.75
4502 5857 1.313091 GGAGGGTGGAATGCGGAAAC 61.313 60.000 0.00 0.00 0.00 2.78
4503 5858 1.001393 GGAGGGTGGAATGCGGAAA 60.001 57.895 0.00 0.00 0.00 3.13
4504 5859 1.910580 GAGGAGGGTGGAATGCGGAA 61.911 60.000 0.00 0.00 0.00 4.30
4505 5860 2.285368 AGGAGGGTGGAATGCGGA 60.285 61.111 0.00 0.00 0.00 5.54
4506 5861 2.190578 GAGGAGGGTGGAATGCGG 59.809 66.667 0.00 0.00 0.00 5.69
4507 5862 1.144936 GAGAGGAGGGTGGAATGCG 59.855 63.158 0.00 0.00 0.00 4.73
4508 5863 0.985490 AGGAGAGGAGGGTGGAATGC 60.985 60.000 0.00 0.00 0.00 3.56
4509 5864 0.835941 CAGGAGAGGAGGGTGGAATG 59.164 60.000 0.00 0.00 0.00 2.67
4510 5865 0.985490 GCAGGAGAGGAGGGTGGAAT 60.985 60.000 0.00 0.00 0.00 3.01
4511 5866 1.613630 GCAGGAGAGGAGGGTGGAA 60.614 63.158 0.00 0.00 0.00 3.53
4512 5867 2.039624 GCAGGAGAGGAGGGTGGA 59.960 66.667 0.00 0.00 0.00 4.02
4513 5868 3.086600 GGCAGGAGAGGAGGGTGG 61.087 72.222 0.00 0.00 0.00 4.61
4514 5869 2.040278 AGGCAGGAGAGGAGGGTG 59.960 66.667 0.00 0.00 0.00 4.61
4515 5870 2.040278 CAGGCAGGAGAGGAGGGT 59.960 66.667 0.00 0.00 0.00 4.34
4516 5871 3.478274 GCAGGCAGGAGAGGAGGG 61.478 72.222 0.00 0.00 0.00 4.30
4517 5872 3.478274 GGCAGGCAGGAGAGGAGG 61.478 72.222 0.00 0.00 0.00 4.30
4518 5873 3.478274 GGGCAGGCAGGAGAGGAG 61.478 72.222 0.00 0.00 0.00 3.69
4521 5876 3.333219 TTGGGGCAGGCAGGAGAG 61.333 66.667 0.00 0.00 0.00 3.20
4522 5877 3.650950 GTTGGGGCAGGCAGGAGA 61.651 66.667 0.00 0.00 0.00 3.71
4523 5878 3.215587 AAGTTGGGGCAGGCAGGAG 62.216 63.158 0.00 0.00 0.00 3.69
4524 5879 3.185203 AAGTTGGGGCAGGCAGGA 61.185 61.111 0.00 0.00 0.00 3.86
4525 5880 2.677875 GAAGTTGGGGCAGGCAGG 60.678 66.667 0.00 0.00 0.00 4.85
4526 5881 2.677875 GGAAGTTGGGGCAGGCAG 60.678 66.667 0.00 0.00 0.00 4.85
4527 5882 3.185203 AGGAAGTTGGGGCAGGCA 61.185 61.111 0.00 0.00 0.00 4.75
4528 5883 2.361737 GAGGAAGTTGGGGCAGGC 60.362 66.667 0.00 0.00 0.00 4.85
4529 5884 2.356667 GGAGGAAGTTGGGGCAGG 59.643 66.667 0.00 0.00 0.00 4.85
4530 5885 2.234296 AGGGAGGAAGTTGGGGCAG 61.234 63.158 0.00 0.00 0.00 4.85
4531 5886 2.121506 AGGGAGGAAGTTGGGGCA 60.122 61.111 0.00 0.00 0.00 5.36
4532 5887 2.356667 CAGGGAGGAAGTTGGGGC 59.643 66.667 0.00 0.00 0.00 5.80
4533 5888 1.852626 ACCAGGGAGGAAGTTGGGG 60.853 63.158 0.00 0.00 41.22 4.96
4534 5889 1.685820 GACCAGGGAGGAAGTTGGG 59.314 63.158 0.00 0.00 41.22 4.12
4535 5890 1.296715 CGACCAGGGAGGAAGTTGG 59.703 63.158 0.00 0.00 41.22 3.77
4536 5891 0.396811 AACGACCAGGGAGGAAGTTG 59.603 55.000 0.00 0.00 41.22 3.16
4537 5892 0.685660 GAACGACCAGGGAGGAAGTT 59.314 55.000 0.00 0.00 41.22 2.66
4538 5893 1.533469 CGAACGACCAGGGAGGAAGT 61.533 60.000 0.00 0.00 41.22 3.01
4539 5894 1.215647 CGAACGACCAGGGAGGAAG 59.784 63.158 0.00 0.00 41.22 3.46
4540 5895 1.228644 TCGAACGACCAGGGAGGAA 60.229 57.895 0.00 0.00 41.22 3.36
4541 5896 1.677966 CTCGAACGACCAGGGAGGA 60.678 63.158 0.00 0.00 41.22 3.71
4542 5897 2.885861 CTCGAACGACCAGGGAGG 59.114 66.667 0.00 0.00 45.67 4.30
4543 5898 2.182030 GCTCGAACGACCAGGGAG 59.818 66.667 0.00 0.00 0.00 4.30
4544 5899 3.744719 CGCTCGAACGACCAGGGA 61.745 66.667 1.02 0.00 34.06 4.20
4546 5901 3.989698 ATGCGCTCGAACGACCAGG 62.990 63.158 13.23 0.00 34.06 4.45
4547 5902 2.507102 ATGCGCTCGAACGACCAG 60.507 61.111 13.23 0.00 34.06 4.00
4548 5903 2.809174 CATGCGCTCGAACGACCA 60.809 61.111 13.23 1.41 34.06 4.02
4549 5904 2.506217 TCATGCGCTCGAACGACC 60.506 61.111 13.23 0.00 34.06 4.79
4550 5905 2.689766 GTCATGCGCTCGAACGAC 59.310 61.111 13.23 4.10 34.06 4.34
4551 5906 2.874315 CGTCATGCGCTCGAACGA 60.874 61.111 13.23 0.00 34.06 3.85
4552 5907 3.902063 CCGTCATGCGCTCGAACG 61.902 66.667 9.73 13.13 39.71 3.95
4553 5908 2.506217 TCCGTCATGCGCTCGAAC 60.506 61.111 9.73 0.53 39.71 3.95
4554 5909 2.004808 ATCTCCGTCATGCGCTCGAA 62.005 55.000 9.73 0.00 39.71 3.71
4555 5910 2.481471 ATCTCCGTCATGCGCTCGA 61.481 57.895 9.73 1.27 39.71 4.04
4556 5911 2.026734 ATCTCCGTCATGCGCTCG 59.973 61.111 9.73 8.36 39.71 5.03
4557 5912 1.953138 CCATCTCCGTCATGCGCTC 60.953 63.158 9.73 0.00 39.71 5.03
4558 5913 2.107750 CCATCTCCGTCATGCGCT 59.892 61.111 9.73 0.00 39.71 5.92
4559 5914 2.202932 ACCATCTCCGTCATGCGC 60.203 61.111 0.00 0.00 39.71 6.09
4560 5915 1.884464 CCACCATCTCCGTCATGCG 60.884 63.158 3.02 3.02 40.95 4.73
4561 5916 0.531532 CTCCACCATCTCCGTCATGC 60.532 60.000 0.00 0.00 0.00 4.06
4562 5917 3.675086 CTCCACCATCTCCGTCATG 57.325 57.895 0.00 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.