Multiple sequence alignment - TraesCS2B01G425500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G425500 chr2B 100.000 8929 0 0 1 8929 611273134 611282062 0.000000e+00 16489.0
1 TraesCS2B01G425500 chr2B 97.727 220 5 0 3609 3828 474915228 474915447 6.540000e-101 379.0
2 TraesCS2B01G425500 chr2B 82.597 385 53 12 6858 7231 4461258 4461639 2.400000e-85 327.0
3 TraesCS2B01G425500 chr2B 82.338 385 54 12 6858 7231 4050519 4050900 1.120000e-83 322.0
4 TraesCS2B01G425500 chr2B 80.203 394 60 14 6858 7237 754993554 754993165 6.830000e-71 279.0
5 TraesCS2B01G425500 chr2A 95.222 4542 149 33 3828 8347 663321802 663326297 0.000000e+00 7123.0
6 TraesCS2B01G425500 chr2A 95.404 2959 98 13 671 3611 663318866 663321804 0.000000e+00 4676.0
7 TraesCS2B01G425500 chr2A 93.373 679 38 7 1 676 662976664 662975990 0.000000e+00 998.0
8 TraesCS2B01G425500 chr2A 93.158 570 18 8 8345 8900 663326431 663326993 0.000000e+00 817.0
9 TraesCS2B01G425500 chr2A 79.048 420 72 13 6828 7237 655053400 655052987 3.180000e-69 274.0
10 TraesCS2B01G425500 chr2D 95.080 3638 114 23 1 3611 519122870 519126469 0.000000e+00 5666.0
11 TraesCS2B01G425500 chr2D 96.179 1544 45 12 3828 5367 519126467 519128000 0.000000e+00 2512.0
12 TraesCS2B01G425500 chr2D 94.380 1459 68 10 6575 8022 519129480 519130935 0.000000e+00 2228.0
13 TraesCS2B01G425500 chr2D 97.589 788 18 1 6017 6803 519128693 519129480 0.000000e+00 1349.0
14 TraesCS2B01G425500 chr2D 96.525 518 13 3 5360 5877 519128180 519128692 0.000000e+00 852.0
15 TraesCS2B01G425500 chr2D 92.705 562 22 10 8345 8900 519131462 519132010 0.000000e+00 793.0
16 TraesCS2B01G425500 chr2D 95.135 185 8 1 8020 8204 519131048 519131231 3.150000e-74 291.0
17 TraesCS2B01G425500 chr2D 79.494 395 63 13 6858 7238 297233868 297234258 1.910000e-66 265.0
18 TraesCS2B01G425500 chr6A 91.128 541 28 13 8369 8899 390131386 390131916 0.000000e+00 715.0
19 TraesCS2B01G425500 chr1A 91.199 534 31 10 8372 8899 380359637 380359114 0.000000e+00 712.0
20 TraesCS2B01G425500 chr7A 90.943 541 29 12 8369 8899 431482916 431483446 0.000000e+00 710.0
21 TraesCS2B01G425500 chr6B 90.221 542 34 7 8369 8900 154906903 154907435 0.000000e+00 689.0
22 TraesCS2B01G425500 chr4A 88.403 457 30 5 8346 8797 389306381 389305943 6.140000e-146 529.0
23 TraesCS2B01G425500 chr4A 93.130 131 7 1 8176 8304 389306587 389306717 3.290000e-44 191.0
24 TraesCS2B01G425500 chr4A 90.566 106 4 2 8801 8900 389305617 389305512 1.560000e-27 135.0
25 TraesCS2B01G425500 chr4A 100.000 47 0 0 1841 1887 583528377 583528331 4.440000e-13 87.9
26 TraesCS2B01G425500 chrUn 97.727 220 5 0 3609 3828 354077717 354077936 6.540000e-101 379.0
27 TraesCS2B01G425500 chr6D 97.727 220 5 0 3609 3828 458922100 458922319 6.540000e-101 379.0
28 TraesCS2B01G425500 chr6D 97.273 220 6 0 3609 3828 108491448 108491229 3.040000e-99 374.0
29 TraesCS2B01G425500 chr6D 97.273 220 6 0 3609 3828 168264455 168264674 3.040000e-99 374.0
30 TraesCS2B01G425500 chr5D 97.727 220 5 0 3609 3828 45207040 45206821 6.540000e-101 379.0
31 TraesCS2B01G425500 chr5D 97.727 220 5 0 3609 3828 503225004 503225223 6.540000e-101 379.0
32 TraesCS2B01G425500 chr3D 97.727 220 5 0 3609 3828 598873202 598873421 6.540000e-101 379.0
33 TraesCS2B01G425500 chr3D 97.717 219 5 0 3610 3828 24164328 24164110 2.350000e-100 377.0
34 TraesCS2B01G425500 chr3D 79.475 419 66 16 6828 7231 591660661 591661074 6.830000e-71 279.0
35 TraesCS2B01G425500 chr3D 96.875 96 3 0 4849 4944 121666967 121666872 2.580000e-35 161.0
36 TraesCS2B01G425500 chr5A 79.286 420 67 16 6828 7231 690785775 690786190 8.830000e-70 276.0
37 TraesCS2B01G425500 chr7B 100.000 47 0 0 1841 1887 77317717 77317763 4.440000e-13 87.9
38 TraesCS2B01G425500 chr7B 97.872 47 1 0 1841 1887 590702165 590702119 2.070000e-11 82.4
39 TraesCS2B01G425500 chr3B 100.000 47 0 0 1841 1887 44620693 44620647 4.440000e-13 87.9
40 TraesCS2B01G425500 chr1B 100.000 47 0 0 1841 1887 155719959 155720005 4.440000e-13 87.9
41 TraesCS2B01G425500 chr4D 97.872 47 1 0 1841 1887 16921132 16921178 2.070000e-11 82.4
42 TraesCS2B01G425500 chr4B 93.617 47 3 0 1841 1887 28955547 28955593 4.470000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G425500 chr2B 611273134 611282062 8928 False 16489.000000 16489 100.000000 1 8929 1 chr2B.!!$F4 8928
1 TraesCS2B01G425500 chr2A 663318866 663326993 8127 False 4205.333333 7123 94.594667 671 8900 3 chr2A.!!$F1 8229
2 TraesCS2B01G425500 chr2A 662975990 662976664 674 True 998.000000 998 93.373000 1 676 1 chr2A.!!$R2 675
3 TraesCS2B01G425500 chr2D 519122870 519132010 9140 False 1955.857143 5666 95.370429 1 8900 7 chr2D.!!$F2 8899
4 TraesCS2B01G425500 chr6A 390131386 390131916 530 False 715.000000 715 91.128000 8369 8899 1 chr6A.!!$F1 530
5 TraesCS2B01G425500 chr1A 380359114 380359637 523 True 712.000000 712 91.199000 8372 8899 1 chr1A.!!$R1 527
6 TraesCS2B01G425500 chr7A 431482916 431483446 530 False 710.000000 710 90.943000 8369 8899 1 chr7A.!!$F1 530
7 TraesCS2B01G425500 chr6B 154906903 154907435 532 False 689.000000 689 90.221000 8369 8900 1 chr6B.!!$F1 531
8 TraesCS2B01G425500 chr4A 389305512 389306381 869 True 332.000000 529 89.484500 8346 8900 2 chr4A.!!$R2 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
612 633 0.605319 CACGCAAGCCAACCTAGGAA 60.605 55.0 17.98 0.0 45.62 3.36 F
1944 1966 0.890683 GTTCAGGGCAAACATCTGGG 59.109 55.0 0.00 0.0 0.00 4.45 F
3801 3843 0.037605 AACTTTCCGCGTCGATCCTT 60.038 50.0 4.92 0.0 0.00 3.36 F
3802 3844 0.037605 ACTTTCCGCGTCGATCCTTT 60.038 50.0 4.92 0.0 0.00 3.11 F
5569 5801 0.034896 ACGGTGTCCTCGAAGCATTT 59.965 50.0 0.00 0.0 0.00 2.32 F
6681 7142 0.570272 CGTCCAAACGTTTTTGCAGC 59.430 50.0 11.66 0.0 43.94 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2259 2281 0.323087 TCGGTGGATTCTCTGGTCGA 60.323 55.000 0.00 0.00 0.00 4.20 R
3924 3966 0.037160 TTAAGGTGGGGCGTTCCTTC 59.963 55.000 8.54 0.00 41.17 3.46 R
5047 5090 1.068588 CATTGCTGCCCATTGATCTGG 59.931 52.381 0.00 0.00 35.95 3.86 R
5766 5998 2.414138 GTCTGCAGCAAATTTTCCATGC 59.586 45.455 9.47 6.69 40.34 4.06 R
7297 7761 0.533085 GCTAAAAGGAGGGCGCTAGG 60.533 60.000 7.64 0.00 0.00 3.02 R
8448 9192 0.532862 CAGTTGTTCCGCCTGACAGT 60.533 55.000 0.93 0.00 0.00 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
242 259 2.040544 CGAGCTTGTTTCCGCCCAT 61.041 57.895 0.00 0.00 0.00 4.00
329 346 2.486548 GCCCCTAAACTGTCAGTTGTCA 60.487 50.000 18.84 6.84 38.66 3.58
442 463 3.797039 CACTCACTCTTGTTCCACTTCA 58.203 45.455 0.00 0.00 0.00 3.02
498 519 2.740714 GCAAGTGTCCGTCCGATGC 61.741 63.158 0.00 0.00 0.00 3.91
516 537 5.266242 CGATGCTGGCAACTAATTAAGAAC 58.734 41.667 0.00 0.00 37.61 3.01
542 563 5.536916 TGGTTGGTCCGAAGTAAATGAAAAT 59.463 36.000 0.00 0.00 39.52 1.82
546 567 6.674066 TGGTCCGAAGTAAATGAAAATCAAC 58.326 36.000 0.00 0.00 0.00 3.18
612 633 0.605319 CACGCAAGCCAACCTAGGAA 60.605 55.000 17.98 0.00 45.62 3.36
624 645 4.702131 CCAACCTAGGAAAACCTGAATGAG 59.298 45.833 17.98 0.00 0.00 2.90
627 648 5.749462 ACCTAGGAAAACCTGAATGAGATG 58.251 41.667 17.98 0.00 0.00 2.90
640 661 8.970020 ACCTGAATGAGATGCAACATATTTTTA 58.030 29.630 0.00 0.00 0.00 1.52
641 662 9.976511 CCTGAATGAGATGCAACATATTTTTAT 57.023 29.630 0.00 0.00 0.00 1.40
771 792 9.562408 TGTGTTAGACTTTAATGTGTATGGAAA 57.438 29.630 0.00 0.00 0.00 3.13
778 799 8.066612 ACTTTAATGTGTATGGAAATGGAAGG 57.933 34.615 0.00 0.00 0.00 3.46
1150 1171 3.560902 ATAGACGTGGCGATGATACAG 57.439 47.619 0.00 0.00 0.00 2.74
1287 1308 4.504132 GGATCACGTCCTGCAGTC 57.496 61.111 13.81 4.52 44.16 3.51
1667 1689 3.009143 ACCACCAAGAATACCAAGGAGAC 59.991 47.826 0.00 0.00 0.00 3.36
1716 1738 5.006649 CAGTAACCATACATTGTCCACATCG 59.993 44.000 0.00 0.00 34.29 3.84
1737 1759 2.522836 CGAGAGGTATTGCAGCTGAT 57.477 50.000 20.43 5.40 34.30 2.90
1812 1834 4.935205 CCGAATAGTTTGATGTCAAGTCCA 59.065 41.667 0.00 0.00 37.15 4.02
1842 1864 3.256136 GTCCGAGAAGAATATGTCCGGAT 59.744 47.826 7.81 0.00 44.82 4.18
1944 1966 0.890683 GTTCAGGGCAAACATCTGGG 59.109 55.000 0.00 0.00 0.00 4.45
1947 1969 1.607467 AGGGCAAACATCTGGGCAC 60.607 57.895 0.00 0.00 0.00 5.01
1953 1975 1.270550 CAAACATCTGGGCACAACTCC 59.729 52.381 0.00 0.00 0.00 3.85
2198 2220 4.962362 TCCACCACTGAGCATCTCTAATAA 59.038 41.667 0.00 0.00 34.92 1.40
2243 2265 2.101582 CGCCAGCTAGTCCTATTTCAGT 59.898 50.000 0.00 0.00 0.00 3.41
2259 2281 1.076906 AGTGCCTCGTAGTCCTGGT 59.923 57.895 0.00 0.00 0.00 4.00
2263 2285 1.991099 GCCTCGTAGTCCTGGTCGAC 61.991 65.000 7.13 7.13 0.00 4.20
2277 2299 0.179134 GTCGACCAGAGAATCCACCG 60.179 60.000 3.51 0.00 33.66 4.94
2343 2365 5.376854 GGACATTTGGCCATGTATATGTC 57.623 43.478 23.41 23.41 44.76 3.06
2459 2481 3.000041 TCTATGGTGCTTGCGTAACTTG 59.000 45.455 0.00 0.00 0.00 3.16
2473 2495 4.329256 GCGTAACTTGGTTCTATTCTGGTC 59.671 45.833 0.00 0.00 0.00 4.02
2515 2537 3.570926 TTCGTGTGTATGGACTCTCAC 57.429 47.619 0.00 0.00 0.00 3.51
2528 2550 7.856145 ATGGACTCTCACAATATCTTGTTTC 57.144 36.000 0.00 0.00 43.05 2.78
2623 2646 5.942872 GCAGCTTGCTATCTTTTCACTTTA 58.057 37.500 0.00 0.00 40.96 1.85
2652 2675 5.864418 AGATGTCTAGGGCGTTTACATAA 57.136 39.130 6.97 0.00 31.19 1.90
2653 2676 5.844004 AGATGTCTAGGGCGTTTACATAAG 58.156 41.667 6.97 0.00 31.19 1.73
2654 2677 5.363005 AGATGTCTAGGGCGTTTACATAAGT 59.637 40.000 6.97 0.00 31.19 2.24
2655 2678 5.410355 TGTCTAGGGCGTTTACATAAGTT 57.590 39.130 0.00 0.00 0.00 2.66
2762 2785 2.941025 CCAAGGAGGGCTTGGGGA 60.941 66.667 0.00 0.00 45.51 4.81
2764 2787 1.000396 CAAGGAGGGCTTGGGGAAG 60.000 63.158 0.00 0.00 0.00 3.46
2765 2788 2.923910 AAGGAGGGCTTGGGGAAGC 61.924 63.158 0.00 0.00 44.76 3.86
2786 2812 3.301274 CAGTTTTGGACCCTTTTACCCA 58.699 45.455 0.00 0.00 0.00 4.51
2800 2826 3.510531 TTACCCATGGTAAAGCACACA 57.489 42.857 11.73 0.00 44.06 3.72
2872 2898 2.151202 CATGCCACAGTTACTCGGTTT 58.849 47.619 0.11 0.00 0.00 3.27
2890 2916 2.281761 CCTCACGCCCTTGCACTT 60.282 61.111 0.00 0.00 37.32 3.16
2929 2956 4.041917 CGCCCACGCACTTTGCAT 62.042 61.111 0.00 0.00 45.36 3.96
2953 2980 3.253921 CAGAATGTGTGAGCCATTGTGAA 59.746 43.478 4.75 0.00 42.85 3.18
2955 2982 1.317613 TGTGTGAGCCATTGTGAACC 58.682 50.000 0.00 0.00 0.00 3.62
2956 2983 0.238289 GTGTGAGCCATTGTGAACCG 59.762 55.000 0.00 0.00 0.00 4.44
2957 2984 0.179032 TGTGAGCCATTGTGAACCGT 60.179 50.000 0.00 0.00 0.00 4.83
2963 2990 1.981254 CCATTGTGAACCGTGCATTC 58.019 50.000 0.00 0.00 0.00 2.67
2970 2997 3.308878 AACCGTGCATTCGCTTCGC 62.309 57.895 0.00 0.00 39.64 4.70
3034 3062 6.219473 ACATGCGGATTTACTATGAGAGAAG 58.781 40.000 0.00 0.00 0.00 2.85
3049 3077 4.159120 GAGAGAAGCAAACCGCAATAAAC 58.841 43.478 0.00 0.00 46.13 2.01
3052 3080 0.312416 AGCAAACCGCAATAAACGCA 59.688 45.000 0.00 0.00 46.13 5.24
3105 3133 7.700234 CAGCTTATTTAATTTGGCGTGTCAATA 59.300 33.333 0.00 0.00 0.00 1.90
3106 3134 8.247562 AGCTTATTTAATTTGGCGTGTCAATAA 58.752 29.630 0.00 0.00 0.00 1.40
3107 3135 8.865001 GCTTATTTAATTTGGCGTGTCAATAAA 58.135 29.630 0.00 0.00 0.00 1.40
3109 3137 7.826260 ATTTAATTTGGCGTGTCAATAAAGG 57.174 32.000 0.00 0.00 0.00 3.11
3110 3138 6.576662 TTAATTTGGCGTGTCAATAAAGGA 57.423 33.333 0.00 0.00 0.00 3.36
3154 3182 3.744238 ATTTTTGGCAGGTTTAACGCT 57.256 38.095 0.00 0.00 0.00 5.07
3181 3215 2.558359 AGTCTTTCAGGGAATTTTGGCG 59.442 45.455 0.00 0.00 0.00 5.69
3198 3232 3.088532 TGGCGAATAAAACTCAATGCCT 58.911 40.909 1.33 0.00 41.73 4.75
3227 3261 5.651387 AAGGAACGGAGGTAGTAGTAAAC 57.349 43.478 0.00 0.00 0.00 2.01
3263 3297 7.665559 TCAAATCATAACCATATCTACCTTGCC 59.334 37.037 0.00 0.00 0.00 4.52
3434 3476 8.445493 AGTTACCATATTAACGTGTTAAAGCAC 58.555 33.333 9.06 0.00 38.38 4.40
3557 3599 5.652452 GCTATAAAGAAATCAGTTGGTGGGT 59.348 40.000 0.00 0.00 0.00 4.51
3575 3617 2.558359 GGGTGATGGTCCTTTCAACTTG 59.442 50.000 9.44 0.00 30.18 3.16
3611 3653 1.201414 CTACCAACGGTCCAATTTGCC 59.799 52.381 0.00 0.00 37.09 4.52
3613 3655 0.607620 CCAACGGTCCAATTTGCCAT 59.392 50.000 0.00 0.00 0.00 4.40
3614 3656 1.001860 CCAACGGTCCAATTTGCCATT 59.998 47.619 0.00 0.00 0.00 3.16
3615 3657 2.336667 CAACGGTCCAATTTGCCATTC 58.663 47.619 0.00 0.00 0.00 2.67
3616 3658 1.923356 ACGGTCCAATTTGCCATTCT 58.077 45.000 0.00 0.00 0.00 2.40
3617 3659 3.080300 ACGGTCCAATTTGCCATTCTA 57.920 42.857 0.00 0.00 0.00 2.10
3618 3660 3.631250 ACGGTCCAATTTGCCATTCTAT 58.369 40.909 0.00 0.00 0.00 1.98
3619 3661 3.381272 ACGGTCCAATTTGCCATTCTATG 59.619 43.478 0.00 0.00 0.00 2.23
3620 3662 3.631686 CGGTCCAATTTGCCATTCTATGA 59.368 43.478 0.00 0.00 0.00 2.15
3621 3663 4.261322 CGGTCCAATTTGCCATTCTATGAG 60.261 45.833 0.00 0.00 0.00 2.90
3622 3664 4.646492 GGTCCAATTTGCCATTCTATGAGT 59.354 41.667 0.00 0.00 0.00 3.41
3623 3665 5.221126 GGTCCAATTTGCCATTCTATGAGTC 60.221 44.000 0.00 0.00 0.00 3.36
3624 3666 4.576053 TCCAATTTGCCATTCTATGAGTCG 59.424 41.667 0.00 0.00 0.00 4.18
3625 3667 4.285292 CAATTTGCCATTCTATGAGTCGC 58.715 43.478 0.00 0.00 0.00 5.19
3626 3668 2.988010 TTGCCATTCTATGAGTCGCT 57.012 45.000 0.00 0.00 0.00 4.93
3627 3669 2.988010 TGCCATTCTATGAGTCGCTT 57.012 45.000 0.00 0.00 0.00 4.68
3628 3670 2.826428 TGCCATTCTATGAGTCGCTTC 58.174 47.619 0.00 0.00 0.00 3.86
3629 3671 2.139118 GCCATTCTATGAGTCGCTTCC 58.861 52.381 0.00 0.00 0.00 3.46
3630 3672 2.224161 GCCATTCTATGAGTCGCTTCCT 60.224 50.000 0.00 0.00 0.00 3.36
3631 3673 3.742640 GCCATTCTATGAGTCGCTTCCTT 60.743 47.826 0.00 0.00 0.00 3.36
3632 3674 4.446371 CCATTCTATGAGTCGCTTCCTTT 58.554 43.478 0.00 0.00 0.00 3.11
3633 3675 4.878397 CCATTCTATGAGTCGCTTCCTTTT 59.122 41.667 0.00 0.00 0.00 2.27
3634 3676 5.355350 CCATTCTATGAGTCGCTTCCTTTTT 59.645 40.000 0.00 0.00 0.00 1.94
3635 3677 5.862924 TTCTATGAGTCGCTTCCTTTTTG 57.137 39.130 0.00 0.00 0.00 2.44
3636 3678 2.997485 ATGAGTCGCTTCCTTTTTGC 57.003 45.000 0.00 0.00 0.00 3.68
3642 3684 1.895051 CGCTTCCTTTTTGCGTATGG 58.105 50.000 0.00 0.00 44.00 2.74
3643 3685 1.629013 GCTTCCTTTTTGCGTATGGC 58.371 50.000 0.00 0.00 43.96 4.40
3652 3694 3.227250 GCGTATGGCACCCCTACT 58.773 61.111 0.00 0.00 42.87 2.57
3653 3695 1.069258 GCGTATGGCACCCCTACTC 59.931 63.158 0.00 0.00 42.87 2.59
3654 3696 1.746517 CGTATGGCACCCCTACTCC 59.253 63.158 0.00 0.00 0.00 3.85
3655 3697 1.755393 CGTATGGCACCCCTACTCCC 61.755 65.000 0.00 0.00 0.00 4.30
3656 3698 0.400093 GTATGGCACCCCTACTCCCT 60.400 60.000 0.00 0.00 0.00 4.20
3657 3699 0.345502 TATGGCACCCCTACTCCCTT 59.654 55.000 0.00 0.00 0.00 3.95
3658 3700 0.552615 ATGGCACCCCTACTCCCTTT 60.553 55.000 0.00 0.00 0.00 3.11
3659 3701 1.303282 GGCACCCCTACTCCCTTTG 59.697 63.158 0.00 0.00 0.00 2.77
3660 3702 1.303282 GCACCCCTACTCCCTTTGG 59.697 63.158 0.00 0.00 0.00 3.28
3661 3703 1.303282 CACCCCTACTCCCTTTGGC 59.697 63.158 0.00 0.00 0.00 4.52
3662 3704 1.151677 ACCCCTACTCCCTTTGGCA 60.152 57.895 0.00 0.00 0.00 4.92
3663 3705 1.208165 ACCCCTACTCCCTTTGGCAG 61.208 60.000 0.00 0.00 0.00 4.85
3664 3706 1.077429 CCCTACTCCCTTTGGCAGC 60.077 63.158 0.00 0.00 0.00 5.25
3665 3707 1.685224 CCTACTCCCTTTGGCAGCA 59.315 57.895 0.00 0.00 0.00 4.41
3666 3708 0.257039 CCTACTCCCTTTGGCAGCAT 59.743 55.000 0.00 0.00 0.00 3.79
3667 3709 1.673168 CTACTCCCTTTGGCAGCATC 58.327 55.000 0.00 0.00 0.00 3.91
3668 3710 1.211457 CTACTCCCTTTGGCAGCATCT 59.789 52.381 0.00 0.00 0.00 2.90
3669 3711 1.289160 ACTCCCTTTGGCAGCATCTA 58.711 50.000 0.00 0.00 0.00 1.98
3670 3712 1.065126 ACTCCCTTTGGCAGCATCTAC 60.065 52.381 0.00 0.00 0.00 2.59
3671 3713 1.211457 CTCCCTTTGGCAGCATCTACT 59.789 52.381 0.00 0.00 0.00 2.57
3672 3714 2.435805 CTCCCTTTGGCAGCATCTACTA 59.564 50.000 0.00 0.00 0.00 1.82
3673 3715 2.843730 TCCCTTTGGCAGCATCTACTAA 59.156 45.455 0.00 0.00 0.00 2.24
3674 3716 3.459598 TCCCTTTGGCAGCATCTACTAAT 59.540 43.478 0.00 0.00 0.00 1.73
3675 3717 4.079787 TCCCTTTGGCAGCATCTACTAATT 60.080 41.667 0.00 0.00 0.00 1.40
3676 3718 4.276926 CCCTTTGGCAGCATCTACTAATTC 59.723 45.833 0.00 0.00 0.00 2.17
3677 3719 4.883585 CCTTTGGCAGCATCTACTAATTCA 59.116 41.667 0.00 0.00 0.00 2.57
3678 3720 5.008415 CCTTTGGCAGCATCTACTAATTCAG 59.992 44.000 0.00 0.00 0.00 3.02
3679 3721 5.357742 TTGGCAGCATCTACTAATTCAGA 57.642 39.130 0.00 0.00 0.00 3.27
3680 3722 5.357742 TGGCAGCATCTACTAATTCAGAA 57.642 39.130 0.00 0.00 0.00 3.02
3681 3723 5.118990 TGGCAGCATCTACTAATTCAGAAC 58.881 41.667 0.00 0.00 0.00 3.01
3682 3724 5.104776 TGGCAGCATCTACTAATTCAGAACT 60.105 40.000 0.00 0.00 0.00 3.01
3683 3725 5.819901 GGCAGCATCTACTAATTCAGAACTT 59.180 40.000 0.00 0.00 0.00 2.66
3684 3726 6.986817 GGCAGCATCTACTAATTCAGAACTTA 59.013 38.462 0.00 0.00 0.00 2.24
3685 3727 7.495934 GGCAGCATCTACTAATTCAGAACTTAA 59.504 37.037 0.00 0.00 0.00 1.85
3686 3728 9.050601 GCAGCATCTACTAATTCAGAACTTAAT 57.949 33.333 0.00 0.00 0.00 1.40
3695 3737 9.914131 ACTAATTCAGAACTTAATTTGAAAGCC 57.086 29.630 8.82 0.00 33.71 4.35
3696 3738 9.912634 CTAATTCAGAACTTAATTTGAAAGCCA 57.087 29.630 0.00 0.00 33.71 4.75
3703 3745 9.573133 AGAACTTAATTTGAAAGCCATATTTCG 57.427 29.630 0.00 0.00 41.21 3.46
3704 3746 9.567848 GAACTTAATTTGAAAGCCATATTTCGA 57.432 29.630 0.00 0.00 41.21 3.71
3705 3747 8.911247 ACTTAATTTGAAAGCCATATTTCGAC 57.089 30.769 0.00 0.00 41.21 4.20
3706 3748 7.973944 ACTTAATTTGAAAGCCATATTTCGACC 59.026 33.333 0.00 0.00 41.21 4.79
3707 3749 6.530019 AATTTGAAAGCCATATTTCGACCT 57.470 33.333 0.00 0.00 41.21 3.85
3708 3750 4.963276 TTGAAAGCCATATTTCGACCTG 57.037 40.909 0.00 0.00 41.21 4.00
3709 3751 3.278574 TGAAAGCCATATTTCGACCTGG 58.721 45.455 0.00 0.00 41.21 4.45
3710 3752 3.054728 TGAAAGCCATATTTCGACCTGGA 60.055 43.478 0.00 0.00 41.21 3.86
3711 3753 3.864789 AAGCCATATTTCGACCTGGAT 57.135 42.857 0.00 0.00 0.00 3.41
3712 3754 3.131709 AGCCATATTTCGACCTGGATG 57.868 47.619 0.00 0.00 0.00 3.51
3713 3755 1.537202 GCCATATTTCGACCTGGATGC 59.463 52.381 0.00 0.00 0.00 3.91
3714 3756 2.811873 GCCATATTTCGACCTGGATGCT 60.812 50.000 0.00 0.00 0.00 3.79
3715 3757 3.480470 CCATATTTCGACCTGGATGCTT 58.520 45.455 0.00 0.00 0.00 3.91
3716 3758 3.885297 CCATATTTCGACCTGGATGCTTT 59.115 43.478 0.00 0.00 0.00 3.51
3717 3759 4.339247 CCATATTTCGACCTGGATGCTTTT 59.661 41.667 0.00 0.00 0.00 2.27
3718 3760 3.855689 ATTTCGACCTGGATGCTTTTG 57.144 42.857 0.00 0.00 0.00 2.44
3719 3761 1.533625 TTCGACCTGGATGCTTTTGG 58.466 50.000 0.00 0.00 0.00 3.28
3720 3762 0.322456 TCGACCTGGATGCTTTTGGG 60.322 55.000 0.00 0.00 0.00 4.12
3721 3763 0.322456 CGACCTGGATGCTTTTGGGA 60.322 55.000 0.00 0.00 0.00 4.37
3722 3764 1.683011 CGACCTGGATGCTTTTGGGAT 60.683 52.381 0.00 0.00 0.00 3.85
3723 3765 1.753073 GACCTGGATGCTTTTGGGATG 59.247 52.381 0.00 0.00 0.00 3.51
3724 3766 0.462789 CCTGGATGCTTTTGGGATGC 59.537 55.000 0.00 0.00 34.90 3.91
3725 3767 1.481871 CTGGATGCTTTTGGGATGCT 58.518 50.000 0.00 0.00 35.33 3.79
3726 3768 1.829222 CTGGATGCTTTTGGGATGCTT 59.171 47.619 0.00 0.00 35.33 3.91
3727 3769 1.826720 TGGATGCTTTTGGGATGCTTC 59.173 47.619 0.00 0.00 35.33 3.86
3728 3770 2.105766 GGATGCTTTTGGGATGCTTCT 58.894 47.619 0.00 0.00 34.75 2.85
3729 3771 3.290710 GGATGCTTTTGGGATGCTTCTA 58.709 45.455 0.00 0.00 34.75 2.10
3730 3772 3.701040 GGATGCTTTTGGGATGCTTCTAA 59.299 43.478 0.00 0.00 34.75 2.10
3731 3773 4.343239 GGATGCTTTTGGGATGCTTCTAAT 59.657 41.667 0.00 0.00 34.75 1.73
3732 3774 5.536161 GGATGCTTTTGGGATGCTTCTAATA 59.464 40.000 0.00 0.00 34.75 0.98
3733 3775 6.040842 GGATGCTTTTGGGATGCTTCTAATAA 59.959 38.462 0.00 0.00 34.75 1.40
3734 3776 6.207691 TGCTTTTGGGATGCTTCTAATAAC 57.792 37.500 0.00 0.00 0.00 1.89
3735 3777 5.127031 TGCTTTTGGGATGCTTCTAATAACC 59.873 40.000 0.00 0.00 0.00 2.85
3736 3778 5.127031 GCTTTTGGGATGCTTCTAATAACCA 59.873 40.000 0.00 0.00 0.00 3.67
3737 3779 6.350949 GCTTTTGGGATGCTTCTAATAACCAA 60.351 38.462 0.00 0.00 35.17 3.67
3738 3780 7.633553 GCTTTTGGGATGCTTCTAATAACCAAT 60.634 37.037 0.00 0.00 36.71 3.16
3739 3781 6.713762 TTGGGATGCTTCTAATAACCAATG 57.286 37.500 0.00 0.00 32.31 2.82
3740 3782 6.012337 TGGGATGCTTCTAATAACCAATGA 57.988 37.500 0.00 0.00 0.00 2.57
3741 3783 6.430864 TGGGATGCTTCTAATAACCAATGAA 58.569 36.000 0.00 0.00 0.00 2.57
3742 3784 7.068702 TGGGATGCTTCTAATAACCAATGAAT 58.931 34.615 0.00 0.00 0.00 2.57
3743 3785 7.014518 TGGGATGCTTCTAATAACCAATGAATG 59.985 37.037 0.00 0.00 0.00 2.67
3753 3795 2.288961 CCAATGAATGGCAAGTGCTC 57.711 50.000 2.85 0.00 43.80 4.26
3754 3796 1.822990 CCAATGAATGGCAAGTGCTCT 59.177 47.619 2.85 0.00 43.80 4.09
3755 3797 2.232941 CCAATGAATGGCAAGTGCTCTT 59.767 45.455 2.85 0.00 43.80 2.85
3756 3798 3.508762 CAATGAATGGCAAGTGCTCTTC 58.491 45.455 2.85 7.22 41.70 2.87
3757 3799 1.538047 TGAATGGCAAGTGCTCTTCC 58.462 50.000 2.85 4.38 41.70 3.46
3758 3800 1.074405 TGAATGGCAAGTGCTCTTCCT 59.926 47.619 2.85 1.07 41.70 3.36
3759 3801 2.165998 GAATGGCAAGTGCTCTTCCTT 58.834 47.619 2.85 8.19 41.70 3.36
3760 3802 1.542492 ATGGCAAGTGCTCTTCCTTG 58.458 50.000 2.85 0.00 40.77 3.61
3761 3803 0.183492 TGGCAAGTGCTCTTCCTTGT 59.817 50.000 2.85 0.00 40.13 3.16
3762 3804 1.322442 GGCAAGTGCTCTTCCTTGTT 58.678 50.000 2.85 0.00 40.13 2.83
3763 3805 1.683385 GGCAAGTGCTCTTCCTTGTTT 59.317 47.619 2.85 0.00 40.13 2.83
3764 3806 2.884639 GGCAAGTGCTCTTCCTTGTTTA 59.115 45.455 2.85 0.00 40.13 2.01
3765 3807 3.057946 GGCAAGTGCTCTTCCTTGTTTAG 60.058 47.826 2.85 0.00 40.13 1.85
3766 3808 3.815401 GCAAGTGCTCTTCCTTGTTTAGA 59.185 43.478 0.00 0.00 40.13 2.10
3767 3809 4.457257 GCAAGTGCTCTTCCTTGTTTAGAT 59.543 41.667 0.00 0.00 40.13 1.98
3768 3810 5.391416 GCAAGTGCTCTTCCTTGTTTAGATC 60.391 44.000 0.00 0.00 40.13 2.75
3769 3811 4.837972 AGTGCTCTTCCTTGTTTAGATCC 58.162 43.478 0.00 0.00 0.00 3.36
3770 3812 4.534103 AGTGCTCTTCCTTGTTTAGATCCT 59.466 41.667 0.00 0.00 0.00 3.24
3771 3813 5.721960 AGTGCTCTTCCTTGTTTAGATCCTA 59.278 40.000 0.00 0.00 0.00 2.94
3772 3814 6.385467 AGTGCTCTTCCTTGTTTAGATCCTAT 59.615 38.462 0.00 0.00 0.00 2.57
3773 3815 7.051000 GTGCTCTTCCTTGTTTAGATCCTATT 58.949 38.462 0.00 0.00 0.00 1.73
3774 3816 7.554476 GTGCTCTTCCTTGTTTAGATCCTATTT 59.446 37.037 0.00 0.00 0.00 1.40
3775 3817 7.770897 TGCTCTTCCTTGTTTAGATCCTATTTC 59.229 37.037 0.00 0.00 0.00 2.17
3776 3818 7.770897 GCTCTTCCTTGTTTAGATCCTATTTCA 59.229 37.037 0.00 0.00 0.00 2.69
3777 3819 9.672673 CTCTTCCTTGTTTAGATCCTATTTCAA 57.327 33.333 0.00 0.00 0.00 2.69
3780 3822 8.662781 TCCTTGTTTAGATCCTATTTCAATCG 57.337 34.615 0.00 0.00 0.00 3.34
3781 3823 7.715249 TCCTTGTTTAGATCCTATTTCAATCGG 59.285 37.037 0.00 0.00 0.00 4.18
3782 3824 7.715249 CCTTGTTTAGATCCTATTTCAATCGGA 59.285 37.037 0.00 0.00 35.10 4.55
3783 3825 9.109393 CTTGTTTAGATCCTATTTCAATCGGAA 57.891 33.333 0.00 0.00 34.41 4.30
3784 3826 8.433421 TGTTTAGATCCTATTTCAATCGGAAC 57.567 34.615 0.00 0.00 34.41 3.62
3785 3827 8.265055 TGTTTAGATCCTATTTCAATCGGAACT 58.735 33.333 7.68 7.68 37.25 3.01
3786 3828 9.110502 GTTTAGATCCTATTTCAATCGGAACTT 57.889 33.333 7.82 0.00 35.76 2.66
3787 3829 9.681062 TTTAGATCCTATTTCAATCGGAACTTT 57.319 29.630 7.82 0.00 35.76 2.66
3788 3830 7.793927 AGATCCTATTTCAATCGGAACTTTC 57.206 36.000 0.00 0.00 31.99 2.62
3789 3831 6.768381 AGATCCTATTTCAATCGGAACTTTCC 59.232 38.462 0.00 0.00 44.05 3.13
3797 3839 4.180496 GGAACTTTCCGCGTCGAT 57.820 55.556 4.92 0.00 37.65 3.59
3798 3840 1.996755 GGAACTTTCCGCGTCGATC 59.003 57.895 4.92 0.00 37.65 3.69
3799 3841 1.419107 GGAACTTTCCGCGTCGATCC 61.419 60.000 4.92 1.01 37.65 3.36
3800 3842 0.458025 GAACTTTCCGCGTCGATCCT 60.458 55.000 4.92 0.00 0.00 3.24
3801 3843 0.037605 AACTTTCCGCGTCGATCCTT 60.038 50.000 4.92 0.00 0.00 3.36
3802 3844 0.037605 ACTTTCCGCGTCGATCCTTT 60.038 50.000 4.92 0.00 0.00 3.11
3803 3845 1.076332 CTTTCCGCGTCGATCCTTTT 58.924 50.000 4.92 0.00 0.00 2.27
3804 3846 1.463444 CTTTCCGCGTCGATCCTTTTT 59.537 47.619 4.92 0.00 0.00 1.94
3829 3871 5.662211 TTACGTCTTGTTTTTACTCCTGC 57.338 39.130 0.00 0.00 0.00 4.85
3830 3872 3.805207 ACGTCTTGTTTTTACTCCTGCT 58.195 40.909 0.00 0.00 0.00 4.24
3831 3873 4.952460 ACGTCTTGTTTTTACTCCTGCTA 58.048 39.130 0.00 0.00 0.00 3.49
3832 3874 4.748600 ACGTCTTGTTTTTACTCCTGCTAC 59.251 41.667 0.00 0.00 0.00 3.58
3833 3875 4.151867 CGTCTTGTTTTTACTCCTGCTACC 59.848 45.833 0.00 0.00 0.00 3.18
3834 3876 5.061179 GTCTTGTTTTTACTCCTGCTACCA 58.939 41.667 0.00 0.00 0.00 3.25
3835 3877 5.529800 GTCTTGTTTTTACTCCTGCTACCAA 59.470 40.000 0.00 0.00 0.00 3.67
3836 3878 6.038936 GTCTTGTTTTTACTCCTGCTACCAAA 59.961 38.462 0.00 0.00 0.00 3.28
3837 3879 6.262273 TCTTGTTTTTACTCCTGCTACCAAAG 59.738 38.462 0.00 0.00 0.00 2.77
3884 3926 5.104444 TCACCACCCACTTAAGTCTGTTTTA 60.104 40.000 4.77 0.00 0.00 1.52
3928 3970 9.347240 ACAATGAATTTCATAGATACTGGAAGG 57.653 33.333 12.15 0.00 35.76 3.46
3961 4003 7.012421 CCACCTTAATAAATCAACTAGCCTCAC 59.988 40.741 0.00 0.00 0.00 3.51
3974 4016 4.755123 ACTAGCCTCACAAACATGTTGTAC 59.245 41.667 12.82 0.00 0.00 2.90
3976 4018 2.916111 CCTCACAAACATGTTGTACGC 58.084 47.619 12.82 0.00 0.00 4.42
4094 4136 1.007238 TCCCCCTGTTTTGGTTTCACA 59.993 47.619 0.00 0.00 0.00 3.58
4231 4273 5.950544 TGTGCTTCCACCTATACTATGTT 57.049 39.130 0.00 0.00 41.35 2.71
4250 4292 3.948473 TGTTACTACCACAGCAGCAAAAA 59.052 39.130 0.00 0.00 0.00 1.94
4429 4472 6.310941 TGGTATTCTTTGATTTCTGGTTGGA 58.689 36.000 0.00 0.00 0.00 3.53
4441 4484 4.640771 TCTGGTTGGACTGCTATCTTTT 57.359 40.909 0.00 0.00 0.00 2.27
4555 4598 7.396907 TGATAGCTTCTTGGGATTTCATTGAAA 59.603 33.333 13.88 13.88 35.94 2.69
4560 4603 4.463891 TCTTGGGATTTCATTGAAAGGCTC 59.536 41.667 16.34 11.47 34.92 4.70
4569 4612 4.343231 TCATTGAAAGGCTCCTTTATGCA 58.657 39.130 13.41 5.68 45.16 3.96
4574 4617 2.887151 AGGCTCCTTTATGCAACACT 57.113 45.000 0.00 0.00 0.00 3.55
4810 4853 5.740406 CATTCAGTTTGTTTTGGTTGCATC 58.260 37.500 0.00 0.00 0.00 3.91
4814 4857 6.215121 TCAGTTTGTTTTGGTTGCATCTATG 58.785 36.000 0.00 0.00 0.00 2.23
4852 4895 3.612860 GGTGTACTGAAGTCATGCTTACG 59.387 47.826 0.00 0.00 37.59 3.18
5029 5072 9.561069 GTATTGATGGTATCTTATTGTTCACCT 57.439 33.333 0.00 0.00 0.00 4.00
5089 5132 5.497474 TGTCCTTTCTCATTTAAGGGTAGC 58.503 41.667 0.00 0.00 41.05 3.58
5138 5181 8.594881 ACTCTTGAAAATATTATGCTCCTACG 57.405 34.615 0.00 0.00 0.00 3.51
5425 5657 6.712095 TGCATTTCTTACTTCATCTGTGTTCT 59.288 34.615 0.00 0.00 0.00 3.01
5447 5679 4.900635 ACACAGGCTGTTAAACTTCAAG 57.099 40.909 19.43 5.03 0.00 3.02
5560 5792 4.561735 TTTTGAATTTGACGGTGTCCTC 57.438 40.909 0.00 0.00 0.00 3.71
5568 5800 0.389948 GACGGTGTCCTCGAAGCATT 60.390 55.000 0.00 0.00 0.00 3.56
5569 5801 0.034896 ACGGTGTCCTCGAAGCATTT 59.965 50.000 0.00 0.00 0.00 2.32
5570 5802 1.156736 CGGTGTCCTCGAAGCATTTT 58.843 50.000 0.00 0.00 0.00 1.82
5571 5803 1.535462 CGGTGTCCTCGAAGCATTTTT 59.465 47.619 0.00 0.00 0.00 1.94
5645 5877 6.861065 TGTCAGTGAAATAACCTTTCTCAC 57.139 37.500 0.00 0.00 37.30 3.51
5818 6050 2.039084 CCTGAAACTCTGCCAGTTACCT 59.961 50.000 0.00 0.00 45.32 3.08
5964 6196 9.260002 GATGCTGAAAAAGAAAATAAACTTGGA 57.740 29.630 0.00 0.00 0.00 3.53
5966 6198 9.442047 TGCTGAAAAAGAAAATAAACTTGGAAA 57.558 25.926 0.00 0.00 0.00 3.13
6021 6253 7.880160 TGGATATGACACCTTTATTTTCCTG 57.120 36.000 0.00 0.00 0.00 3.86
6051 6283 9.042008 TGTTTAAGAACTTATGACTGTCTTGAC 57.958 33.333 9.51 0.00 36.70 3.18
6084 6316 6.344500 TCCAAAAACACATTTACTTGCATGT 58.656 32.000 10.40 10.40 33.72 3.21
6267 6500 2.082231 CAGTGCAAGGACTTCATCAGG 58.918 52.381 0.00 0.00 0.00 3.86
6381 6614 3.871594 CCGTTATGTCTGATCCTTTGGAC 59.128 47.826 0.00 0.00 32.98 4.02
6453 6686 4.665833 TTGTAACTGACATATCGGGGAG 57.334 45.455 0.00 0.00 38.07 4.30
6544 6777 5.127031 GGTGGCTGGACATACAACAAATATT 59.873 40.000 0.00 0.00 0.00 1.28
6618 6851 7.948278 AATATTCTTCGAAGCATAGGTACAC 57.052 36.000 20.56 0.00 0.00 2.90
6681 7142 0.570272 CGTCCAAACGTTTTTGCAGC 59.430 50.000 11.66 0.00 43.94 5.25
6749 7210 3.418684 TCCTACCTGGAACTTCTTTGC 57.581 47.619 0.00 0.00 42.94 3.68
7150 7614 7.613585 TCCATATGAACATGCAGATTGTTTTT 58.386 30.769 3.65 0.49 37.43 1.94
7162 7626 8.048534 TGCAGATTGTTTTTGGAAAATTTTGA 57.951 26.923 8.47 0.00 0.00 2.69
7266 7730 4.199310 GTGGACTATTCATTAAGCAGGCA 58.801 43.478 0.00 0.00 0.00 4.75
7297 7761 2.363172 GGACAGACAGGAGGGGAGC 61.363 68.421 0.00 0.00 0.00 4.70
7298 7762 2.284995 ACAGACAGGAGGGGAGCC 60.285 66.667 0.00 0.00 0.00 4.70
7299 7763 2.040278 CAGACAGGAGGGGAGCCT 59.960 66.667 0.00 0.00 35.75 4.58
7300 7764 1.311403 CAGACAGGAGGGGAGCCTA 59.689 63.158 0.00 0.00 33.51 3.93
7301 7765 0.758685 CAGACAGGAGGGGAGCCTAG 60.759 65.000 0.00 0.00 33.51 3.02
7302 7766 2.041405 ACAGGAGGGGAGCCTAGC 60.041 66.667 0.00 0.00 33.51 3.42
7316 7790 0.533085 CCTAGCGCCCTCCTTTTAGC 60.533 60.000 2.29 0.00 0.00 3.09
7322 7796 1.648467 GCCCTCCTTTTAGCGCAGTG 61.648 60.000 11.47 0.00 0.00 3.66
7333 7808 0.453793 AGCGCAGTGTCTACAGCTAG 59.546 55.000 11.47 0.00 37.20 3.42
7360 7835 9.342308 CCTCATGCTTACTAGGAAATTGATTTA 57.658 33.333 0.00 0.00 0.00 1.40
7366 7841 8.352942 GCTTACTAGGAAATTGATTTATGGTGG 58.647 37.037 0.00 0.00 0.00 4.61
7372 7847 8.893563 AGGAAATTGATTTATGGTGGACTTTA 57.106 30.769 0.00 0.00 0.00 1.85
7388 7864 6.476706 GTGGACTTTATTTATCTTTGCATGGC 59.523 38.462 0.00 0.00 0.00 4.40
7517 7993 0.173255 CAAATGGCCGAATGTCACCC 59.827 55.000 0.00 0.00 0.00 4.61
7551 8027 1.460255 CCCAGAACCCTTTCAGGCA 59.540 57.895 0.00 0.00 37.13 4.75
7553 8029 0.895559 CCAGAACCCTTTCAGGCACC 60.896 60.000 0.00 0.00 32.13 5.01
7564 8040 2.066999 CAGGCACCTCTACTCCCCC 61.067 68.421 0.00 0.00 0.00 5.40
7574 8050 2.509931 CTACTCCCCCGTCTGGTGGA 62.510 65.000 0.00 0.00 33.78 4.02
7601 8077 5.530915 TGGTGCTATTCCCTTTAATCATTCG 59.469 40.000 0.00 0.00 0.00 3.34
7697 8173 1.349688 ACAGATCGTAACCTTGGGCAA 59.650 47.619 0.00 0.00 0.00 4.52
7726 8202 1.696336 AGTGCATCAAGTCTCACAGGT 59.304 47.619 0.00 0.00 32.25 4.00
7746 8222 4.479056 AGGTGAGTCAGGAGAGGATAGTAA 59.521 45.833 0.00 0.00 0.00 2.24
7803 8279 3.977427 AGGCTTGGAAACGTTTTTGATC 58.023 40.909 15.89 1.29 0.00 2.92
7808 8284 2.614520 TGGAAACGTTTTTGATCTGCGA 59.385 40.909 15.89 0.00 0.00 5.10
7820 8296 2.545946 TGATCTGCGAGATAGACTGTCG 59.454 50.000 1.52 0.00 43.16 4.35
7893 8369 9.057089 CAAATCCTTCACTAGACTTAACAACTT 57.943 33.333 0.00 0.00 0.00 2.66
7906 8382 1.222567 ACAACTTGTTCTCCCCACCT 58.777 50.000 0.00 0.00 0.00 4.00
7912 8388 0.696143 TGTTCTCCCCACCTTGGACA 60.696 55.000 0.00 0.00 40.96 4.02
7929 8405 4.827692 TGGACACAAGCGTGATAACTAAT 58.172 39.130 6.65 0.00 46.80 1.73
7951 8427 5.912149 TTATCAAGGATAGGCCAAGTGAT 57.088 39.130 5.01 7.51 40.02 3.06
7954 8430 4.526970 TCAAGGATAGGCCAAGTGATTTC 58.473 43.478 5.01 0.00 40.02 2.17
7968 8444 4.218312 AGTGATTTCTTTTGGAGCTTGGT 58.782 39.130 0.00 0.00 0.00 3.67
7978 8454 1.906574 TGGAGCTTGGTAGGGTAACTG 59.093 52.381 0.00 0.00 0.00 3.16
8003 8479 1.050204 TTTTCAGCTGCTTTGGCCAT 58.950 45.000 6.09 0.00 37.74 4.40
8009 8485 0.108945 GCTGCTTTGGCCATTCAGTC 60.109 55.000 22.42 14.75 37.74 3.51
8013 8489 0.169672 CTTTGGCCATTCAGTCGCTG 59.830 55.000 6.09 1.02 0.00 5.18
8165 8756 1.164411 TGATCGCCTGCGTTCAATTT 58.836 45.000 19.52 0.00 42.66 1.82
8167 8758 1.398390 GATCGCCTGCGTTCAATTTCT 59.602 47.619 15.52 0.00 40.74 2.52
8206 8797 1.408340 CACCTTCAATGTTGTGTGCCA 59.592 47.619 0.00 0.00 0.00 4.92
8208 8799 1.269726 CCTTCAATGTTGTGTGCCACC 60.270 52.381 0.00 0.00 32.73 4.61
8243 8836 5.971763 TCAACTAAATGCACAACTGGTTTT 58.028 33.333 0.00 0.00 0.00 2.43
8264 8857 2.526304 TTACCATGCTAGCGGCTAAG 57.474 50.000 11.39 6.63 42.39 2.18
8292 8885 3.831323 TGGCTCAAAATGTTCTCCTGAA 58.169 40.909 0.00 0.00 0.00 3.02
8312 8905 9.310449 TCCTGAACTTGTAGAACTATAGAGTTT 57.690 33.333 6.78 0.00 46.23 2.66
8320 8913 8.851960 TGTAGAACTATAGAGTTTAATGCACG 57.148 34.615 6.78 0.00 46.23 5.34
8324 8917 8.467598 AGAACTATAGAGTTTAATGCACGAAGA 58.532 33.333 6.78 0.00 46.23 2.87
8325 8918 7.988904 ACTATAGAGTTTAATGCACGAAGAC 57.011 36.000 6.78 0.00 28.61 3.01
8326 8919 5.950965 ATAGAGTTTAATGCACGAAGACG 57.049 39.130 0.00 0.00 45.75 4.18
8327 8920 7.627939 ACTATAGAGTTTAATGCACGAAGACGT 60.628 37.037 6.78 0.00 43.16 4.34
8351 9087 8.842777 CGTAAATAAAACCACAATTCCTTTACG 58.157 33.333 8.68 8.68 40.96 3.18
8380 9116 0.605319 ATCGCACTTGCTTTCGGGAA 60.605 50.000 0.00 0.00 39.32 3.97
8401 9137 2.565841 ACTGAAGCTTGTCTTGACCAC 58.434 47.619 2.10 0.00 34.56 4.16
8448 9192 1.152138 GCAGCCCATCCATCCATCA 59.848 57.895 0.00 0.00 0.00 3.07
8453 9201 1.816961 GCCCATCCATCCATCACTGTC 60.817 57.143 0.00 0.00 0.00 3.51
8681 9432 5.241506 CAGGAGAAACAGTTGAGCCAAATTA 59.758 40.000 0.00 0.00 0.00 1.40
8682 9433 6.012745 AGGAGAAACAGTTGAGCCAAATTAT 58.987 36.000 0.00 0.00 0.00 1.28
8702 9454 2.103537 TTTTAACAGCTACCCGAGGC 57.896 50.000 0.00 0.00 0.00 4.70
8710 9464 3.432051 CTACCCGAGGCTGAAGCGG 62.432 68.421 5.44 5.44 44.42 5.52
8776 9530 5.932883 CCCTAATTAAATTAGCTCTCCCGAC 59.067 44.000 0.00 0.00 40.65 4.79
8832 9908 5.220854 CCGTCCAGTTGTTCATATTGAATCC 60.221 44.000 0.00 0.00 38.79 3.01
8881 9963 1.341531 CCGGTAGCTGTATTCCTCCAG 59.658 57.143 0.00 0.00 0.00 3.86
8893 9975 0.758734 TCCTCCAGGTTCCATATGCG 59.241 55.000 0.00 0.00 36.34 4.73
8908 9990 2.127609 GCGCTCTGCACGTGTTTC 60.128 61.111 18.38 0.49 45.45 2.78
8909 9991 2.168621 CGCTCTGCACGTGTTTCG 59.831 61.111 18.38 10.00 46.00 3.46
8910 9992 2.127609 GCTCTGCACGTGTTTCGC 60.128 61.111 18.38 11.41 44.19 4.70
8911 9993 2.168621 CTCTGCACGTGTTTCGCG 59.831 61.111 18.38 0.00 44.19 5.87
8912 9994 3.281751 CTCTGCACGTGTTTCGCGG 62.282 63.158 18.38 7.39 41.96 6.46
8915 9997 4.599434 GCACGTGTTTCGCGGCAA 62.599 61.111 18.38 0.00 41.96 4.52
8916 9998 2.425124 CACGTGTTTCGCGGCAAG 60.425 61.111 7.58 8.36 41.96 4.01
8917 9999 2.586635 ACGTGTTTCGCGGCAAGA 60.587 55.556 6.13 0.00 41.96 3.02
8918 10000 1.959226 ACGTGTTTCGCGGCAAGAT 60.959 52.632 6.13 0.00 41.96 2.40
8919 10001 1.509787 CGTGTTTCGCGGCAAGATG 60.510 57.895 6.13 0.00 33.47 2.90
8920 10002 1.154225 GTGTTTCGCGGCAAGATGG 60.154 57.895 6.13 0.00 0.00 3.51
8921 10003 1.599518 TGTTTCGCGGCAAGATGGT 60.600 52.632 6.13 0.00 0.00 3.55
8922 10004 1.154225 GTTTCGCGGCAAGATGGTG 60.154 57.895 6.13 0.00 0.00 4.17
8923 10005 1.302112 TTTCGCGGCAAGATGGTGA 60.302 52.632 6.13 0.00 0.00 4.02
8924 10006 0.886938 TTTCGCGGCAAGATGGTGAA 60.887 50.000 6.13 0.00 0.00 3.18
8925 10007 1.573829 TTCGCGGCAAGATGGTGAAC 61.574 55.000 6.13 0.00 0.00 3.18
8926 10008 2.480555 GCGGCAAGATGGTGAACG 59.519 61.111 0.00 0.00 0.00 3.95
8927 10009 3.039202 GCGGCAAGATGGTGAACGG 62.039 63.158 0.00 0.00 0.00 4.44
8928 10010 2.877691 GGCAAGATGGTGAACGGC 59.122 61.111 0.00 0.00 0.00 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.110006 GGGAGATTCCGAGCTGCC 59.890 66.667 0.00 0.00 42.66 4.85
242 259 1.153168 GCGGGGCTCAGCTAATCAA 60.153 57.895 0.00 0.00 0.00 2.57
329 346 2.584391 GGTGAGAAGCTGTCGGGGT 61.584 63.158 0.00 0.00 0.00 4.95
408 429 3.832171 GAGTGCGCACGCTTCGAG 61.832 66.667 32.96 0.00 42.51 4.04
442 463 0.033601 TTGCCATGAATACCCCGCTT 60.034 50.000 0.00 0.00 0.00 4.68
498 519 6.575162 ACCAAGTTCTTAATTAGTTGCCAG 57.425 37.500 0.00 0.00 0.00 4.85
516 537 4.069304 TCATTTACTTCGGACCAACCAAG 58.931 43.478 0.00 0.00 38.90 3.61
612 633 7.414222 AATATGTTGCATCTCATTCAGGTTT 57.586 32.000 0.00 0.00 0.00 3.27
641 662 9.533253 GAAGGATGAAAAGAAAATTTGTCAAGA 57.467 29.630 0.00 0.00 0.00 3.02
642 663 9.316730 TGAAGGATGAAAAGAAAATTTGTCAAG 57.683 29.630 0.00 0.00 0.00 3.02
643 664 9.097257 GTGAAGGATGAAAAGAAAATTTGTCAA 57.903 29.630 0.00 0.00 0.00 3.18
645 666 8.877808 AGTGAAGGATGAAAAGAAAATTTGTC 57.122 30.769 0.00 0.00 0.00 3.18
646 667 9.101655 CAAGTGAAGGATGAAAAGAAAATTTGT 57.898 29.630 0.00 0.00 0.00 2.83
647 668 8.066000 GCAAGTGAAGGATGAAAAGAAAATTTG 58.934 33.333 0.00 0.00 0.00 2.32
648 669 7.227314 GGCAAGTGAAGGATGAAAAGAAAATTT 59.773 33.333 0.00 0.00 0.00 1.82
650 671 6.226052 GGCAAGTGAAGGATGAAAAGAAAAT 58.774 36.000 0.00 0.00 0.00 1.82
655 676 3.160269 AGGGCAAGTGAAGGATGAAAAG 58.840 45.455 0.00 0.00 0.00 2.27
771 792 1.211457 CCAGCTAGCACTTCCTTCCAT 59.789 52.381 18.83 0.00 0.00 3.41
778 799 5.017294 AGTAAGATTCCAGCTAGCACTTC 57.983 43.478 18.83 6.30 0.00 3.01
898 919 0.528033 CTGCCAGTCAGATGAGAGCG 60.528 60.000 0.00 0.00 45.72 5.03
1150 1171 1.000938 CTGGCAGACCTTTTCAACAGC 60.001 52.381 9.42 0.00 36.63 4.40
1287 1308 0.165295 CATCAGAAGCAGTGCGTGTG 59.835 55.000 19.82 19.82 33.29 3.82
1667 1689 4.346129 GAATTGATTAGCTGTCTTTGCCG 58.654 43.478 0.00 0.00 0.00 5.69
1716 1738 1.144936 AGCTGCAATACCTCTCGGC 59.855 57.895 1.02 0.00 0.00 5.54
1737 1759 7.123547 GGATTTTGTGGATTAGGTTGGTGATTA 59.876 37.037 0.00 0.00 0.00 1.75
1812 1834 7.175990 GGACATATTCTTCTCGGACTTCTAGAT 59.824 40.741 0.00 0.00 0.00 1.98
1842 1864 5.185635 CCAAAAGGCTGAAGTTGGAATATGA 59.814 40.000 11.95 0.00 42.66 2.15
1944 1966 2.978010 CCACCCACGGAGTTGTGC 60.978 66.667 0.00 0.00 41.61 4.57
1947 1969 0.611200 TATCACCACCCACGGAGTTG 59.389 55.000 0.00 0.00 41.61 3.16
1953 1975 1.873903 GCTAGCATATCACCACCCACG 60.874 57.143 10.63 0.00 0.00 4.94
2085 2107 0.460987 CTCCAGACCTCGGATGCAAC 60.461 60.000 0.00 0.00 0.00 4.17
2243 2265 2.044555 CGACCAGGACTACGAGGCA 61.045 63.158 0.00 0.00 0.00 4.75
2259 2281 0.323087 TCGGTGGATTCTCTGGTCGA 60.323 55.000 0.00 0.00 0.00 4.20
2263 2285 0.461961 GGACTCGGTGGATTCTCTGG 59.538 60.000 0.00 0.00 0.00 3.86
2277 2299 1.403814 TCCATCGTGATCCAGGACTC 58.596 55.000 0.00 0.00 31.07 3.36
2343 2365 6.317893 AGGAAAACATATACCTGTTAAAGCCG 59.682 38.462 0.00 0.00 38.38 5.52
2426 2448 7.145323 GCAAGCACCATAGAAAAACTCTAAAA 58.855 34.615 0.00 0.00 40.12 1.52
2429 2451 4.391830 CGCAAGCACCATAGAAAAACTCTA 59.608 41.667 0.00 0.00 41.00 2.43
2441 2463 0.881118 CCAAGTTACGCAAGCACCAT 59.119 50.000 0.00 0.00 45.62 3.55
2442 2464 0.464735 ACCAAGTTACGCAAGCACCA 60.465 50.000 0.00 0.00 45.62 4.17
2459 2481 7.872113 AAATCAAGATGACCAGAATAGAACC 57.128 36.000 0.00 0.00 0.00 3.62
2473 2495 7.043192 ACGAAAAACTTGCTGAAAATCAAGATG 60.043 33.333 8.72 0.00 41.50 2.90
2694 2717 9.706691 CTCCTTTGACAAACAGAAGTAGTATTA 57.293 33.333 0.00 0.00 0.00 0.98
2696 2719 7.162082 CCTCCTTTGACAAACAGAAGTAGTAT 58.838 38.462 0.00 0.00 0.00 2.12
2761 2784 3.819564 AAAAGGGTCCAAAACTGCTTC 57.180 42.857 0.00 0.00 0.00 3.86
2762 2785 3.386726 GGTAAAAGGGTCCAAAACTGCTT 59.613 43.478 0.00 0.00 0.00 3.91
2764 2787 2.036733 GGGTAAAAGGGTCCAAAACTGC 59.963 50.000 0.00 0.00 0.00 4.40
2765 2788 3.301274 TGGGTAAAAGGGTCCAAAACTG 58.699 45.455 0.00 0.00 0.00 3.16
2766 2789 3.691698 TGGGTAAAAGGGTCCAAAACT 57.308 42.857 0.00 0.00 0.00 2.66
2767 2790 3.007506 CCATGGGTAAAAGGGTCCAAAAC 59.992 47.826 2.85 0.00 32.56 2.43
2786 2812 3.573538 TGCTCAAATGTGTGCTTTACCAT 59.426 39.130 11.07 0.00 43.25 3.55
2800 2826 4.599041 TGTGGGCTAATAACTGCTCAAAT 58.401 39.130 0.00 0.00 41.70 2.32
2872 2898 2.818169 AAGTGCAAGGGCGTGAGGA 61.818 57.895 0.00 0.00 45.35 3.71
2921 2948 4.083110 GCTCACACATTCTGTATGCAAAGT 60.083 41.667 0.00 0.00 37.81 2.66
2929 2956 3.752747 CACAATGGCTCACACATTCTGTA 59.247 43.478 0.00 0.00 36.47 2.74
2941 2968 1.210155 GCACGGTTCACAATGGCTC 59.790 57.895 0.00 0.00 0.00 4.70
2947 2974 1.163420 AGCGAATGCACGGTTCACAA 61.163 50.000 0.00 0.00 46.23 3.33
2970 2997 2.263540 GGCCTTGCATGTGCCAAG 59.736 61.111 20.15 8.23 44.70 3.61
3010 3037 5.791336 TCTCTCATAGTAAATCCGCATGT 57.209 39.130 0.00 0.00 0.00 3.21
3034 3062 0.707822 CTGCGTTTATTGCGGTTTGC 59.292 50.000 0.00 0.00 46.70 3.68
3154 3182 8.311109 GCCAAAATTCCCTGAAAGACTAATTTA 58.689 33.333 0.00 0.00 32.24 1.40
3181 3215 9.788960 CTTTAAGGTAGGCATTGAGTTTTATTC 57.211 33.333 0.00 0.00 0.00 1.75
3198 3232 4.677182 ACTACCTCCGTTCCTTTAAGGTA 58.323 43.478 11.13 0.00 40.69 3.08
3246 3280 6.409349 GGACTTTAGGCAAGGTAGATATGGTT 60.409 42.308 0.00 0.00 36.72 3.67
3257 3291 2.750888 GCGCGGACTTTAGGCAAGG 61.751 63.158 8.83 0.00 36.72 3.61
3263 3297 0.527817 CCACTAGGCGCGGACTTTAG 60.528 60.000 8.83 1.71 0.00 1.85
3464 3506 8.919145 ACAATTATGTTCAGTAACCCAAAAAGA 58.081 29.630 0.00 0.00 35.91 2.52
3510 3552 6.051717 GCAGTAGAGATGAAGATTTAAGCCA 58.948 40.000 0.00 0.00 0.00 4.75
3545 3587 0.400213 GACCATCACCCACCAACTGA 59.600 55.000 0.00 0.00 0.00 3.41
3557 3599 2.490718 CCCCAAGTTGAAAGGACCATCA 60.491 50.000 3.87 0.00 0.00 3.07
3589 3631 3.075884 GCAAATTGGACCGTTGGTAGTA 58.924 45.455 0.00 0.00 35.25 1.82
3590 3632 1.883926 GCAAATTGGACCGTTGGTAGT 59.116 47.619 0.00 0.00 35.25 2.73
3591 3633 1.201414 GGCAAATTGGACCGTTGGTAG 59.799 52.381 0.00 0.00 35.25 3.18
3611 3653 6.253746 CAAAAAGGAAGCGACTCATAGAATG 58.746 40.000 0.00 0.00 0.00 2.67
3613 3655 4.154195 GCAAAAAGGAAGCGACTCATAGAA 59.846 41.667 0.00 0.00 0.00 2.10
3614 3656 3.684788 GCAAAAAGGAAGCGACTCATAGA 59.315 43.478 0.00 0.00 0.00 1.98
3615 3657 4.008539 GCAAAAAGGAAGCGACTCATAG 57.991 45.455 0.00 0.00 0.00 2.23
3617 3659 2.997485 GCAAAAAGGAAGCGACTCAT 57.003 45.000 0.00 0.00 0.00 2.90
3624 3666 1.629013 GCCATACGCAAAAAGGAAGC 58.371 50.000 0.00 0.00 37.47 3.86
3634 3676 1.682451 GAGTAGGGGTGCCATACGCA 61.682 60.000 0.00 0.00 44.33 5.24
3635 3677 1.069258 GAGTAGGGGTGCCATACGC 59.931 63.158 0.00 0.00 44.33 4.42
3636 3678 1.746517 GGAGTAGGGGTGCCATACG 59.253 63.158 0.00 0.00 44.33 3.06
3637 3679 0.400093 AGGGAGTAGGGGTGCCATAC 60.400 60.000 0.00 0.00 40.59 2.39
3638 3680 0.345502 AAGGGAGTAGGGGTGCCATA 59.654 55.000 0.00 0.00 0.00 2.74
3639 3681 0.552615 AAAGGGAGTAGGGGTGCCAT 60.553 55.000 0.00 0.00 0.00 4.40
3640 3682 1.151677 AAAGGGAGTAGGGGTGCCA 60.152 57.895 0.00 0.00 0.00 4.92
3641 3683 1.303282 CAAAGGGAGTAGGGGTGCC 59.697 63.158 0.00 0.00 0.00 5.01
3642 3684 1.303282 CCAAAGGGAGTAGGGGTGC 59.697 63.158 0.00 0.00 35.59 5.01
3643 3685 1.303282 GCCAAAGGGAGTAGGGGTG 59.697 63.158 0.00 0.00 35.59 4.61
3644 3686 1.151677 TGCCAAAGGGAGTAGGGGT 60.152 57.895 0.00 0.00 35.59 4.95
3645 3687 1.609783 CTGCCAAAGGGAGTAGGGG 59.390 63.158 0.00 0.00 36.37 4.79
3646 3688 1.077429 GCTGCCAAAGGGAGTAGGG 60.077 63.158 6.44 0.00 43.30 3.53
3647 3689 0.257039 ATGCTGCCAAAGGGAGTAGG 59.743 55.000 6.44 0.00 43.30 3.18
3648 3690 1.211457 AGATGCTGCCAAAGGGAGTAG 59.789 52.381 6.44 0.00 43.30 2.57
3649 3691 1.289160 AGATGCTGCCAAAGGGAGTA 58.711 50.000 6.44 2.02 43.30 2.59
3650 3692 1.065126 GTAGATGCTGCCAAAGGGAGT 60.065 52.381 6.44 0.00 43.30 3.85
3651 3693 1.211457 AGTAGATGCTGCCAAAGGGAG 59.789 52.381 0.00 0.00 44.25 4.30
3652 3694 1.289160 AGTAGATGCTGCCAAAGGGA 58.711 50.000 0.00 0.00 35.59 4.20
3653 3695 3.281727 TTAGTAGATGCTGCCAAAGGG 57.718 47.619 0.00 0.00 37.18 3.95
3654 3696 4.883585 TGAATTAGTAGATGCTGCCAAAGG 59.116 41.667 0.00 0.00 0.00 3.11
3655 3697 5.819379 TCTGAATTAGTAGATGCTGCCAAAG 59.181 40.000 0.00 0.00 0.00 2.77
3656 3698 5.744171 TCTGAATTAGTAGATGCTGCCAAA 58.256 37.500 0.00 0.00 0.00 3.28
3657 3699 5.357742 TCTGAATTAGTAGATGCTGCCAA 57.642 39.130 0.00 0.00 0.00 4.52
3658 3700 5.104776 AGTTCTGAATTAGTAGATGCTGCCA 60.105 40.000 0.00 0.00 0.00 4.92
3659 3701 5.363939 AGTTCTGAATTAGTAGATGCTGCC 58.636 41.667 0.00 0.00 0.00 4.85
3660 3702 6.917217 AAGTTCTGAATTAGTAGATGCTGC 57.083 37.500 0.00 0.00 0.00 5.25
3669 3711 9.914131 GGCTTTCAAATTAAGTTCTGAATTAGT 57.086 29.630 0.00 0.00 0.00 2.24
3670 3712 9.912634 TGGCTTTCAAATTAAGTTCTGAATTAG 57.087 29.630 0.00 0.00 0.00 1.73
3677 3719 9.573133 CGAAATATGGCTTTCAAATTAAGTTCT 57.427 29.630 0.00 0.00 35.32 3.01
3678 3720 9.567848 TCGAAATATGGCTTTCAAATTAAGTTC 57.432 29.630 0.00 0.00 35.32 3.01
3679 3721 9.353999 GTCGAAATATGGCTTTCAAATTAAGTT 57.646 29.630 0.00 0.00 35.32 2.66
3680 3722 7.973944 GGTCGAAATATGGCTTTCAAATTAAGT 59.026 33.333 0.00 0.00 35.32 2.24
3681 3723 8.190784 AGGTCGAAATATGGCTTTCAAATTAAG 58.809 33.333 0.00 0.00 35.32 1.85
3682 3724 7.973388 CAGGTCGAAATATGGCTTTCAAATTAA 59.027 33.333 0.00 0.00 35.32 1.40
3683 3725 7.416213 CCAGGTCGAAATATGGCTTTCAAATTA 60.416 37.037 0.00 0.00 35.32 1.40
3684 3726 6.332630 CAGGTCGAAATATGGCTTTCAAATT 58.667 36.000 0.00 0.00 35.32 1.82
3685 3727 5.163519 CCAGGTCGAAATATGGCTTTCAAAT 60.164 40.000 0.00 0.00 35.32 2.32
3686 3728 4.157656 CCAGGTCGAAATATGGCTTTCAAA 59.842 41.667 0.00 0.00 35.32 2.69
3687 3729 3.694072 CCAGGTCGAAATATGGCTTTCAA 59.306 43.478 0.00 0.00 35.32 2.69
3688 3730 3.054728 TCCAGGTCGAAATATGGCTTTCA 60.055 43.478 0.00 0.00 35.32 2.69
3689 3731 3.541632 TCCAGGTCGAAATATGGCTTTC 58.458 45.455 0.00 0.00 32.63 2.62
3690 3732 3.644966 TCCAGGTCGAAATATGGCTTT 57.355 42.857 0.00 0.00 32.63 3.51
3691 3733 3.480470 CATCCAGGTCGAAATATGGCTT 58.520 45.455 0.00 0.00 32.63 4.35
3692 3734 2.811873 GCATCCAGGTCGAAATATGGCT 60.812 50.000 0.00 0.00 32.63 4.75
3693 3735 1.537202 GCATCCAGGTCGAAATATGGC 59.463 52.381 0.00 0.00 32.63 4.40
3694 3736 3.131709 AGCATCCAGGTCGAAATATGG 57.868 47.619 0.00 0.00 0.00 2.74
3695 3737 5.276270 CAAAAGCATCCAGGTCGAAATATG 58.724 41.667 0.00 0.00 0.00 1.78
3696 3738 4.339247 CCAAAAGCATCCAGGTCGAAATAT 59.661 41.667 0.00 0.00 0.00 1.28
3697 3739 3.694072 CCAAAAGCATCCAGGTCGAAATA 59.306 43.478 0.00 0.00 0.00 1.40
3698 3740 2.493278 CCAAAAGCATCCAGGTCGAAAT 59.507 45.455 0.00 0.00 0.00 2.17
3699 3741 1.885887 CCAAAAGCATCCAGGTCGAAA 59.114 47.619 0.00 0.00 0.00 3.46
3700 3742 1.533625 CCAAAAGCATCCAGGTCGAA 58.466 50.000 0.00 0.00 0.00 3.71
3701 3743 0.322456 CCCAAAAGCATCCAGGTCGA 60.322 55.000 0.00 0.00 0.00 4.20
3702 3744 0.322456 TCCCAAAAGCATCCAGGTCG 60.322 55.000 0.00 0.00 0.00 4.79
3703 3745 1.753073 CATCCCAAAAGCATCCAGGTC 59.247 52.381 0.00 0.00 0.00 3.85
3704 3746 1.856629 CATCCCAAAAGCATCCAGGT 58.143 50.000 0.00 0.00 0.00 4.00
3705 3747 0.462789 GCATCCCAAAAGCATCCAGG 59.537 55.000 0.00 0.00 0.00 4.45
3706 3748 1.481871 AGCATCCCAAAAGCATCCAG 58.518 50.000 0.00 0.00 0.00 3.86
3707 3749 1.826720 GAAGCATCCCAAAAGCATCCA 59.173 47.619 0.00 0.00 0.00 3.41
3708 3750 2.105766 AGAAGCATCCCAAAAGCATCC 58.894 47.619 0.00 0.00 0.00 3.51
3709 3751 4.989279 TTAGAAGCATCCCAAAAGCATC 57.011 40.909 0.00 0.00 0.00 3.91
3710 3752 6.183360 GGTTATTAGAAGCATCCCAAAAGCAT 60.183 38.462 0.00 0.00 0.00 3.79
3711 3753 5.127031 GGTTATTAGAAGCATCCCAAAAGCA 59.873 40.000 0.00 0.00 0.00 3.91
3712 3754 5.127031 TGGTTATTAGAAGCATCCCAAAAGC 59.873 40.000 0.00 0.00 0.00 3.51
3713 3755 6.773976 TGGTTATTAGAAGCATCCCAAAAG 57.226 37.500 0.00 0.00 0.00 2.27
3714 3756 7.398618 TCATTGGTTATTAGAAGCATCCCAAAA 59.601 33.333 0.00 0.00 34.67 2.44
3715 3757 6.894654 TCATTGGTTATTAGAAGCATCCCAAA 59.105 34.615 0.00 0.00 34.67 3.28
3716 3758 6.430864 TCATTGGTTATTAGAAGCATCCCAA 58.569 36.000 0.00 0.00 35.40 4.12
3717 3759 6.012337 TCATTGGTTATTAGAAGCATCCCA 57.988 37.500 0.00 0.00 0.00 4.37
3718 3760 6.959639 TTCATTGGTTATTAGAAGCATCCC 57.040 37.500 0.00 0.00 0.00 3.85
3719 3761 7.373493 CCATTCATTGGTTATTAGAAGCATCC 58.627 38.462 0.00 0.00 40.99 3.51
3730 3772 9.451963 GAAGAGCACTTGCCATTCATTGGTTAT 62.452 40.741 0.00 0.00 41.07 1.89
3731 3773 8.235154 GAAGAGCACTTGCCATTCATTGGTTA 62.235 42.308 0.00 0.00 41.07 2.85
3732 3774 7.523439 GAAGAGCACTTGCCATTCATTGGTT 62.523 44.000 0.00 0.00 41.07 3.67
3733 3775 6.119666 GAAGAGCACTTGCCATTCATTGGT 62.120 45.833 0.00 0.00 41.07 3.67
3734 3776 3.675228 GAAGAGCACTTGCCATTCATTGG 60.675 47.826 0.00 0.00 41.54 3.16
3735 3777 3.508762 GAAGAGCACTTGCCATTCATTG 58.491 45.455 0.00 0.00 43.38 2.82
3736 3778 2.494870 GGAAGAGCACTTGCCATTCATT 59.505 45.455 0.00 0.00 43.38 2.57
3737 3779 2.097825 GGAAGAGCACTTGCCATTCAT 58.902 47.619 0.00 0.00 43.38 2.57
3738 3780 1.074405 AGGAAGAGCACTTGCCATTCA 59.926 47.619 11.57 0.00 43.80 2.57
3739 3781 1.831580 AGGAAGAGCACTTGCCATTC 58.168 50.000 11.57 2.79 43.80 2.67
3740 3782 1.891150 CAAGGAAGAGCACTTGCCATT 59.109 47.619 11.57 0.00 43.80 3.16
3741 3783 1.202976 ACAAGGAAGAGCACTTGCCAT 60.203 47.619 11.57 0.00 46.03 4.40
3742 3784 0.183492 ACAAGGAAGAGCACTTGCCA 59.817 50.000 11.57 0.00 46.03 4.92
3743 3785 1.322442 AACAAGGAAGAGCACTTGCC 58.678 50.000 11.57 7.79 46.03 4.52
3744 3786 3.815401 TCTAAACAAGGAAGAGCACTTGC 59.185 43.478 7.31 7.31 46.03 4.01
3746 3788 5.013599 AGGATCTAAACAAGGAAGAGCACTT 59.986 40.000 0.00 0.00 39.24 3.16
3747 3789 4.534103 AGGATCTAAACAAGGAAGAGCACT 59.466 41.667 0.00 0.00 0.00 4.40
3748 3790 4.837972 AGGATCTAAACAAGGAAGAGCAC 58.162 43.478 0.00 0.00 0.00 4.40
3749 3791 6.814954 ATAGGATCTAAACAAGGAAGAGCA 57.185 37.500 0.00 0.00 0.00 4.26
3750 3792 7.770897 TGAAATAGGATCTAAACAAGGAAGAGC 59.229 37.037 0.00 0.00 0.00 4.09
3751 3793 9.672673 TTGAAATAGGATCTAAACAAGGAAGAG 57.327 33.333 0.00 0.00 0.00 2.85
3754 3796 9.109393 CGATTGAAATAGGATCTAAACAAGGAA 57.891 33.333 0.00 0.00 0.00 3.36
3755 3797 7.715249 CCGATTGAAATAGGATCTAAACAAGGA 59.285 37.037 0.00 0.00 33.52 3.36
3756 3798 7.715249 TCCGATTGAAATAGGATCTAAACAAGG 59.285 37.037 1.18 0.00 35.61 3.61
3757 3799 8.662781 TCCGATTGAAATAGGATCTAAACAAG 57.337 34.615 1.18 0.00 35.61 3.16
3758 3800 8.889717 GTTCCGATTGAAATAGGATCTAAACAA 58.110 33.333 5.81 0.00 39.46 2.83
3759 3801 8.265055 AGTTCCGATTGAAATAGGATCTAAACA 58.735 33.333 11.76 0.00 39.46 2.83
3760 3802 8.664211 AGTTCCGATTGAAATAGGATCTAAAC 57.336 34.615 11.76 5.41 39.46 2.01
3761 3803 9.681062 AAAGTTCCGATTGAAATAGGATCTAAA 57.319 29.630 13.10 0.00 38.48 1.85
3762 3804 9.326413 GAAAGTTCCGATTGAAATAGGATCTAA 57.674 33.333 13.10 0.00 38.48 2.10
3763 3805 7.931948 GGAAAGTTCCGATTGAAATAGGATCTA 59.068 37.037 13.10 0.00 38.48 1.98
3764 3806 6.768381 GGAAAGTTCCGATTGAAATAGGATCT 59.232 38.462 5.81 7.57 40.03 2.75
3765 3807 6.960468 GGAAAGTTCCGATTGAAATAGGATC 58.040 40.000 5.81 5.67 39.46 3.36
3766 3808 6.944234 GGAAAGTTCCGATTGAAATAGGAT 57.056 37.500 5.81 0.00 39.46 3.24
3780 3822 1.419107 GGATCGACGCGGAAAGTTCC 61.419 60.000 12.47 8.70 44.05 3.62
3781 3823 0.458025 AGGATCGACGCGGAAAGTTC 60.458 55.000 12.47 0.00 0.00 3.01
3782 3824 0.037605 AAGGATCGACGCGGAAAGTT 60.038 50.000 12.47 0.00 0.00 2.66
3783 3825 0.037605 AAAGGATCGACGCGGAAAGT 60.038 50.000 12.47 0.00 0.00 2.66
3784 3826 1.076332 AAAAGGATCGACGCGGAAAG 58.924 50.000 12.47 0.00 0.00 2.62
3785 3827 1.515081 AAAAAGGATCGACGCGGAAA 58.485 45.000 12.47 0.00 0.00 3.13
3786 3828 3.220447 AAAAAGGATCGACGCGGAA 57.780 47.368 12.47 0.00 0.00 4.30
3803 3845 8.284693 GCAGGAGTAAAAACAAGACGTAATAAA 58.715 33.333 0.00 0.00 0.00 1.40
3804 3846 7.658575 AGCAGGAGTAAAAACAAGACGTAATAA 59.341 33.333 0.00 0.00 0.00 1.40
3805 3847 7.156673 AGCAGGAGTAAAAACAAGACGTAATA 58.843 34.615 0.00 0.00 0.00 0.98
3806 3848 5.995897 AGCAGGAGTAAAAACAAGACGTAAT 59.004 36.000 0.00 0.00 0.00 1.89
3807 3849 5.362263 AGCAGGAGTAAAAACAAGACGTAA 58.638 37.500 0.00 0.00 0.00 3.18
3808 3850 4.952460 AGCAGGAGTAAAAACAAGACGTA 58.048 39.130 0.00 0.00 0.00 3.57
3809 3851 3.805207 AGCAGGAGTAAAAACAAGACGT 58.195 40.909 0.00 0.00 0.00 4.34
3810 3852 4.151867 GGTAGCAGGAGTAAAAACAAGACG 59.848 45.833 0.00 0.00 0.00 4.18
3811 3853 5.061179 TGGTAGCAGGAGTAAAAACAAGAC 58.939 41.667 0.00 0.00 0.00 3.01
3812 3854 5.298989 TGGTAGCAGGAGTAAAAACAAGA 57.701 39.130 0.00 0.00 0.00 3.02
3813 3855 6.385649 TTTGGTAGCAGGAGTAAAAACAAG 57.614 37.500 0.00 0.00 0.00 3.16
3814 3856 6.385649 CTTTGGTAGCAGGAGTAAAAACAA 57.614 37.500 0.00 0.00 0.00 2.83
3828 3870 6.691388 CCATTTTAATCTTACGCTTTGGTAGC 59.309 38.462 0.00 0.00 46.83 3.58
3829 3871 7.981142 TCCATTTTAATCTTACGCTTTGGTAG 58.019 34.615 0.00 0.00 0.00 3.18
3830 3872 7.925043 TCCATTTTAATCTTACGCTTTGGTA 57.075 32.000 0.00 0.00 0.00 3.25
3831 3873 6.827586 TCCATTTTAATCTTACGCTTTGGT 57.172 33.333 0.00 0.00 0.00 3.67
3832 3874 7.165812 CGATTCCATTTTAATCTTACGCTTTGG 59.834 37.037 0.00 0.00 32.29 3.28
3833 3875 7.305418 GCGATTCCATTTTAATCTTACGCTTTG 60.305 37.037 0.00 0.00 38.51 2.77
3834 3876 6.691388 GCGATTCCATTTTAATCTTACGCTTT 59.309 34.615 0.00 0.00 38.51 3.51
3835 3877 6.038271 AGCGATTCCATTTTAATCTTACGCTT 59.962 34.615 0.00 0.00 46.88 4.68
3836 3878 5.527582 AGCGATTCCATTTTAATCTTACGCT 59.472 36.000 0.00 0.00 44.87 5.07
3837 3879 5.748592 AGCGATTCCATTTTAATCTTACGC 58.251 37.500 0.00 0.00 41.11 4.42
3838 3880 6.846283 GTGAGCGATTCCATTTTAATCTTACG 59.154 38.462 0.00 0.00 32.29 3.18
3839 3881 7.132863 GGTGAGCGATTCCATTTTAATCTTAC 58.867 38.462 0.00 0.00 32.29 2.34
3884 3926 4.866508 TTGTAGATCGAGGTGTTTCTGT 57.133 40.909 0.00 0.00 0.00 3.41
3923 3965 1.844544 TAAGGTGGGGCGTTCCTTCC 61.845 60.000 8.54 3.66 41.17 3.46
3924 3966 0.037160 TTAAGGTGGGGCGTTCCTTC 59.963 55.000 8.54 0.00 41.17 3.46
3928 3970 3.949113 TGATTTATTAAGGTGGGGCGTTC 59.051 43.478 0.00 0.00 0.00 3.95
3990 4032 3.181493 GCAAGGAAACTATGTGATGCCAG 60.181 47.826 0.00 0.00 42.68 4.85
4053 4095 3.710209 AAGGACTGTGAGGAATCAAGG 57.290 47.619 0.00 0.00 0.00 3.61
4094 4136 5.077564 TCACCGCTATCACTGGTATAGATT 58.922 41.667 0.00 0.00 33.82 2.40
4429 4472 6.769512 TGAACTTACAGGAAAAGATAGCAGT 58.230 36.000 0.00 0.00 0.00 4.40
4441 4484 7.287927 CAGGTATAATCCTCTGAACTTACAGGA 59.712 40.741 0.00 0.00 38.31 3.86
4555 4598 2.887151 AGTGTTGCATAAAGGAGCCT 57.113 45.000 0.00 0.00 0.00 4.58
4560 4603 7.856894 CCAAAAATGAAAAGTGTTGCATAAAGG 59.143 33.333 0.00 0.00 31.07 3.11
4569 4612 5.296531 GTCATGCCCAAAAATGAAAAGTGTT 59.703 36.000 0.00 0.00 34.70 3.32
4574 4617 9.213799 GTATAAAGTCATGCCCAAAAATGAAAA 57.786 29.630 0.00 0.00 34.70 2.29
4645 4688 2.025793 TCCACCAGACACAAACTCCAAA 60.026 45.455 0.00 0.00 0.00 3.28
4810 4853 6.866480 ACACCAAAATTCCACTAATGCATAG 58.134 36.000 0.00 0.44 37.66 2.23
4814 4857 6.072175 TCAGTACACCAAAATTCCACTAATGC 60.072 38.462 0.00 0.00 0.00 3.56
4815 4858 7.447374 TCAGTACACCAAAATTCCACTAATG 57.553 36.000 0.00 0.00 0.00 1.90
4816 4859 7.724061 ACTTCAGTACACCAAAATTCCACTAAT 59.276 33.333 0.00 0.00 0.00 1.73
4817 4860 7.057894 ACTTCAGTACACCAAAATTCCACTAA 58.942 34.615 0.00 0.00 0.00 2.24
4818 4861 6.597562 ACTTCAGTACACCAAAATTCCACTA 58.402 36.000 0.00 0.00 0.00 2.74
4819 4862 5.445964 ACTTCAGTACACCAAAATTCCACT 58.554 37.500 0.00 0.00 0.00 4.00
4820 4863 5.298276 TGACTTCAGTACACCAAAATTCCAC 59.702 40.000 0.00 0.00 0.00 4.02
4828 4871 3.769739 AGCATGACTTCAGTACACCAA 57.230 42.857 0.00 0.00 0.00 3.67
4852 4895 3.243636 CCTTTGATATCCCTGCATGTTGC 60.244 47.826 0.00 0.00 45.29 4.17
5008 5051 9.573133 CAAAAAGGTGAACAATAAGATACCATC 57.427 33.333 0.00 0.00 0.00 3.51
5010 5053 7.039363 CCCAAAAAGGTGAACAATAAGATACCA 60.039 37.037 0.00 0.00 34.66 3.25
5011 5054 7.320399 CCCAAAAAGGTGAACAATAAGATACC 58.680 38.462 0.00 0.00 34.66 2.73
5014 5057 5.843969 ACCCCAAAAAGGTGAACAATAAGAT 59.156 36.000 0.00 0.00 35.85 2.40
5029 5072 1.218196 TGGCAGAAGGTACCCCAAAAA 59.782 47.619 8.74 0.00 0.00 1.94
5047 5090 1.068588 CATTGCTGCCCATTGATCTGG 59.931 52.381 0.00 0.00 35.95 3.86
5207 5252 5.008019 CGAACTCTTTATAACCTGCATGCAT 59.992 40.000 22.97 9.42 0.00 3.96
5208 5253 4.332543 CGAACTCTTTATAACCTGCATGCA 59.667 41.667 21.29 21.29 0.00 3.96
5209 5254 4.570772 TCGAACTCTTTATAACCTGCATGC 59.429 41.667 11.82 11.82 0.00 4.06
5425 5657 5.676552 TCTTGAAGTTTAACAGCCTGTGTA 58.323 37.500 0.00 0.00 39.03 2.90
5431 5663 6.819397 AGGTATTCTTGAAGTTTAACAGCC 57.181 37.500 0.00 0.00 0.00 4.85
5666 5898 6.294899 GGTTAACATACTACACCTGTCACAGA 60.295 42.308 6.30 0.00 32.44 3.41
5766 5998 2.414138 GTCTGCAGCAAATTTTCCATGC 59.586 45.455 9.47 6.69 40.34 4.06
5818 6050 2.038033 GGGTAGCTGGTTCACTTGTGTA 59.962 50.000 0.00 0.00 0.00 2.90
5976 6208 5.362143 TCCATTCATCTGTTGTGGACAAAAA 59.638 36.000 0.00 0.00 37.93 1.94
6021 6253 7.444487 AGACAGTCATAAGTTCTTAAACAACCC 59.556 37.037 2.66 0.00 37.88 4.11
6094 6326 6.189859 TGGAAGCCTTATCATCTCAATGTTT 58.810 36.000 0.00 0.00 34.32 2.83
6267 6500 1.461127 GGATCACGTTGCAGACACTTC 59.539 52.381 0.00 0.00 0.00 3.01
6381 6614 2.951642 ACAAGATATCACGGGCAAATGG 59.048 45.455 5.32 0.00 0.00 3.16
6544 6777 1.064758 CCCTCCAATCCCAATGACGAA 60.065 52.381 0.00 0.00 0.00 3.85
6618 6851 5.665916 AATAAGCAGAACTTGGGAAATGG 57.334 39.130 0.00 0.00 39.58 3.16
6681 7142 5.163652 GCTTTAGTTATGGGTTACTGGCTTG 60.164 44.000 0.00 0.00 0.00 4.01
6749 7210 3.257469 ACTGTATGATGTCTGGTGCTG 57.743 47.619 0.00 0.00 0.00 4.41
6751 7212 4.697352 AGAAAACTGTATGATGTCTGGTGC 59.303 41.667 0.00 0.00 0.00 5.01
6966 7427 4.573201 GTGGCTCGCATGGTTACTTATTTA 59.427 41.667 0.00 0.00 0.00 1.40
6983 7444 4.318974 GCAATTGTCATTTTTGTGTGGCTC 60.319 41.667 7.40 0.00 0.00 4.70
7118 7582 9.916360 AATCTGCATGTTCATATGGATGTATAT 57.084 29.630 2.13 0.00 34.41 0.86
7266 7730 2.603473 TGTCCAGCGCACCTAGGT 60.603 61.111 9.21 9.21 0.00 3.08
7297 7761 0.533085 GCTAAAAGGAGGGCGCTAGG 60.533 60.000 7.64 0.00 0.00 3.02
7298 7762 0.876342 CGCTAAAAGGAGGGCGCTAG 60.876 60.000 7.64 0.00 41.08 3.42
7299 7763 1.143183 CGCTAAAAGGAGGGCGCTA 59.857 57.895 7.64 0.00 41.08 4.26
7300 7764 2.125106 CGCTAAAAGGAGGGCGCT 60.125 61.111 7.64 1.38 41.08 5.92
7322 7796 2.147436 GCATGAGGCTAGCTGTAGAC 57.853 55.000 15.72 0.00 40.25 2.59
7333 7808 5.126067 TCAATTTCCTAGTAAGCATGAGGC 58.874 41.667 0.00 0.00 45.30 4.70
7360 7835 7.716799 TGCAAAGATAAATAAAGTCCACCAT 57.283 32.000 0.00 0.00 0.00 3.55
7366 7841 6.476706 GGTGCCATGCAAAGATAAATAAAGTC 59.523 38.462 0.00 0.00 41.47 3.01
7372 7847 4.025360 TGAGGTGCCATGCAAAGATAAAT 58.975 39.130 0.00 0.00 41.47 1.40
7388 7864 7.144661 TGCAAAGTAAACAACAATATGAGGTG 58.855 34.615 0.00 0.00 0.00 4.00
7442 7918 2.644299 TCCACATGGAGAAACTGGACAT 59.356 45.455 0.00 0.00 39.78 3.06
7517 7993 2.097825 CTGGGGCTTGAAATTGGAGAG 58.902 52.381 0.00 0.00 0.00 3.20
7551 8027 1.306970 CAGACGGGGGAGTAGAGGT 59.693 63.158 0.00 0.00 0.00 3.85
7553 8029 1.038130 CACCAGACGGGGGAGTAGAG 61.038 65.000 0.00 0.00 46.16 2.43
7564 8040 0.606401 AGCACCATTTCCACCAGACG 60.606 55.000 0.00 0.00 0.00 4.18
7574 8050 7.919385 ATGATTAAAGGGAATAGCACCATTT 57.081 32.000 0.00 0.00 42.59 2.32
7601 8077 1.604604 TGCTGTAGGTTGGTTGCTTC 58.395 50.000 0.00 0.00 0.00 3.86
7697 8173 2.744202 GACTTGATGCACTCGACCAAAT 59.256 45.455 0.00 0.00 0.00 2.32
7726 8202 5.191921 TCAGTTACTATCCTCTCCTGACTCA 59.808 44.000 0.00 0.00 0.00 3.41
7729 8205 5.221165 GCTTCAGTTACTATCCTCTCCTGAC 60.221 48.000 0.00 0.00 0.00 3.51
7746 8222 3.604582 GGCTCAGAATGTTAGCTTCAGT 58.395 45.455 0.00 0.00 36.32 3.41
7808 8284 3.006112 TCAGAAGGCGACAGTCTATCT 57.994 47.619 0.00 0.00 0.00 1.98
7837 8313 1.136500 GATCCACCAAGGTAGGACGAC 59.864 57.143 11.06 0.00 39.02 4.34
7845 8321 2.881403 GCTTCACATGATCCACCAAGGT 60.881 50.000 0.00 0.00 39.02 3.50
7893 8369 0.696143 TGTCCAAGGTGGGGAGAACA 60.696 55.000 0.00 0.00 38.32 3.18
7906 8382 3.120321 AGTTATCACGCTTGTGTCCAA 57.880 42.857 0.00 0.00 44.22 3.53
7929 8405 5.912149 ATCACTTGGCCTATCCTTGATAA 57.088 39.130 3.32 0.00 31.82 1.75
7951 8427 3.117284 ACCCTACCAAGCTCCAAAAGAAA 60.117 43.478 0.00 0.00 0.00 2.52
7954 8430 2.586648 ACCCTACCAAGCTCCAAAAG 57.413 50.000 0.00 0.00 0.00 2.27
7968 8444 4.504340 GCTGAAAACCACTCAGTTACCCTA 60.504 45.833 2.12 0.00 42.01 3.53
7978 8454 2.544486 CCAAAGCAGCTGAAAACCACTC 60.544 50.000 20.43 0.00 0.00 3.51
8003 8479 4.200838 TGATACAATTCCAGCGACTGAA 57.799 40.909 8.20 0.00 32.44 3.02
8009 8485 8.484641 AGTCATATTATGATACAATTCCAGCG 57.515 34.615 9.50 0.00 42.04 5.18
8051 8642 6.902224 ACAGTTGTTGGCTTCAAAATAAAC 57.098 33.333 0.00 0.00 31.46 2.01
8065 8656 4.836825 ACTCCATCCATCTACAGTTGTTG 58.163 43.478 0.00 0.00 0.00 3.33
8129 8720 6.879458 AGGCGATCAACTAAAAACTGTAAGAT 59.121 34.615 0.00 0.00 37.43 2.40
8165 8756 2.821969 GCAAAAGATCCTGGCTTCAAGA 59.178 45.455 0.00 0.00 0.00 3.02
8167 8758 2.297033 GTGCAAAAGATCCTGGCTTCAA 59.703 45.455 0.00 0.00 0.00 2.69
8206 8797 6.072452 GCATTTAGTTGAGTGCTAGAAAAGGT 60.072 38.462 0.00 0.00 34.85 3.50
8208 8799 6.798959 GTGCATTTAGTTGAGTGCTAGAAAAG 59.201 38.462 0.00 0.00 38.37 2.27
8319 8912 7.269724 GGAATTGTGGTTTTATTTACGTCTTCG 59.730 37.037 0.00 0.00 43.34 3.79
8320 8913 8.294577 AGGAATTGTGGTTTTATTTACGTCTTC 58.705 33.333 0.00 0.00 0.00 2.87
8324 8917 9.681692 GTAAAGGAATTGTGGTTTTATTTACGT 57.318 29.630 0.00 0.00 0.00 3.57
8325 8918 8.842777 CGTAAAGGAATTGTGGTTTTATTTACG 58.157 33.333 10.68 10.68 43.28 3.18
8326 8919 9.681692 ACGTAAAGGAATTGTGGTTTTATTTAC 57.318 29.630 0.00 0.00 0.00 2.01
8329 8922 9.602568 AAAACGTAAAGGAATTGTGGTTTTATT 57.397 25.926 0.00 0.00 0.00 1.40
8331 8924 8.248945 TGAAAACGTAAAGGAATTGTGGTTTTA 58.751 29.630 0.00 0.00 0.00 1.52
8333 8926 6.631962 TGAAAACGTAAAGGAATTGTGGTTT 58.368 32.000 0.00 0.00 0.00 3.27
8335 8928 5.838531 TGAAAACGTAAAGGAATTGTGGT 57.161 34.783 0.00 0.00 0.00 4.16
8336 8929 5.174943 GCTTGAAAACGTAAAGGAATTGTGG 59.825 40.000 0.00 0.00 0.00 4.17
8339 8932 6.183359 CGATGCTTGAAAACGTAAAGGAATTG 60.183 38.462 0.00 0.00 0.00 2.32
8341 8934 5.390613 CGATGCTTGAAAACGTAAAGGAAT 58.609 37.500 0.00 0.00 0.00 3.01
8342 8935 4.778904 CGATGCTTGAAAACGTAAAGGAA 58.221 39.130 0.00 0.00 0.00 3.36
8343 8936 3.364565 GCGATGCTTGAAAACGTAAAGGA 60.365 43.478 0.00 0.00 0.00 3.36
8351 9087 1.453148 GCAAGTGCGATGCTTGAAAAC 59.547 47.619 15.06 0.00 44.29 2.43
8380 9116 2.945668 GTGGTCAAGACAAGCTTCAGTT 59.054 45.455 0.00 0.00 33.60 3.16
8401 9137 8.988934 TGTACAGAGCAAAATTAGTAAGAACTG 58.011 33.333 0.00 0.00 36.36 3.16
8448 9192 0.532862 CAGTTGTTCCGCCTGACAGT 60.533 55.000 0.93 0.00 0.00 3.55
8453 9201 2.113139 ACCCAGTTGTTCCGCCTG 59.887 61.111 0.00 0.00 0.00 4.85
8681 9432 3.014623 GCCTCGGGTAGCTGTTAAAAAT 58.985 45.455 0.00 0.00 0.00 1.82
8682 9433 2.039348 AGCCTCGGGTAGCTGTTAAAAA 59.961 45.455 0.00 0.00 38.11 1.94
8710 9464 3.058160 ATGGTGACTTGCAGCCGC 61.058 61.111 0.00 0.00 44.28 6.53
8722 9476 4.062293 TCTTTGTACGAGTTTCCATGGTG 58.938 43.478 12.58 0.00 0.00 4.17
8832 9908 7.618964 AACGCAGACAAGTTGTATATATACG 57.381 36.000 8.88 8.66 36.06 3.06
8881 9963 1.944778 GCAGAGCGCATATGGAACC 59.055 57.895 11.47 0.00 41.79 3.62
8893 9975 2.127609 GCGAAACACGTGCAGAGC 60.128 61.111 17.22 12.98 44.60 4.09
8900 9982 1.959226 ATCTTGCCGCGAAACACGT 60.959 52.632 8.23 0.00 44.60 4.49
8901 9983 1.509787 CATCTTGCCGCGAAACACG 60.510 57.895 8.23 0.22 45.66 4.49
8902 9984 1.154225 CCATCTTGCCGCGAAACAC 60.154 57.895 8.23 0.00 0.00 3.32
8903 9985 1.599518 ACCATCTTGCCGCGAAACA 60.600 52.632 8.23 0.00 0.00 2.83
8904 9986 1.154225 CACCATCTTGCCGCGAAAC 60.154 57.895 8.23 0.00 0.00 2.78
8905 9987 0.886938 TTCACCATCTTGCCGCGAAA 60.887 50.000 8.23 0.00 0.00 3.46
8906 9988 1.302112 TTCACCATCTTGCCGCGAA 60.302 52.632 8.23 0.00 0.00 4.70
8907 9989 2.032634 GTTCACCATCTTGCCGCGA 61.033 57.895 8.23 0.00 0.00 5.87
8908 9990 2.480555 GTTCACCATCTTGCCGCG 59.519 61.111 0.00 0.00 0.00 6.46
8909 9991 2.480555 CGTTCACCATCTTGCCGC 59.519 61.111 0.00 0.00 0.00 6.53
8910 9992 3.039202 GCCGTTCACCATCTTGCCG 62.039 63.158 0.00 0.00 0.00 5.69
8911 9993 2.877691 GCCGTTCACCATCTTGCC 59.122 61.111 0.00 0.00 0.00 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.