Multiple sequence alignment - TraesCS2B01G422200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G422200 chr2B 100.000 4523 0 0 1 4523 607342975 607338453 0.000000e+00 8353.0
1 TraesCS2B01G422200 chr2B 87.478 575 70 2 76 649 211995679 211996252 0.000000e+00 662.0
2 TraesCS2B01G422200 chr2B 77.222 540 77 26 3640 4154 126170158 126170676 1.600000e-69 274.0
3 TraesCS2B01G422200 chr2D 94.771 2735 108 18 816 3532 516124264 516121547 0.000000e+00 4226.0
4 TraesCS2B01G422200 chr2D 82.318 673 110 6 119 790 383545311 383544647 3.920000e-160 575.0
5 TraesCS2B01G422200 chr2A 94.731 1708 68 11 816 2509 659708177 659706478 0.000000e+00 2636.0
6 TraesCS2B01G422200 chr2A 92.555 994 37 11 2549 3528 659706475 659705505 0.000000e+00 1391.0
7 TraesCS2B01G422200 chr2A 84.412 757 112 6 38 792 572098806 572098054 0.000000e+00 739.0
8 TraesCS2B01G422200 chr2A 87.013 539 62 8 1 537 705572448 705571916 6.470000e-168 601.0
9 TraesCS2B01G422200 chr2A 81.897 116 18 2 3947 4062 117371416 117371304 1.340000e-15 95.3
10 TraesCS2B01G422200 chr4A 86.329 790 101 4 1 790 588591284 588590502 0.000000e+00 854.0
11 TraesCS2B01G422200 chr4A 78.253 584 80 24 3622 4177 7614661 7614097 9.380000e-87 331.0
12 TraesCS2B01G422200 chr4A 76.056 568 88 26 3622 4162 82396067 82395521 7.510000e-63 252.0
13 TraesCS2B01G422200 chr4A 93.377 151 10 0 4373 4523 497446250 497446400 1.640000e-54 224.0
14 TraesCS2B01G422200 chr4A 96.970 33 0 1 2482 2514 454599755 454599724 2.000000e-03 54.7
15 TraesCS2B01G422200 chr4B 85.919 767 98 9 28 790 442973903 442973143 0.000000e+00 809.0
16 TraesCS2B01G422200 chr4B 94.558 147 8 0 4377 4523 540458733 540458587 1.270000e-55 228.0
17 TraesCS2B01G422200 chr5B 84.741 793 118 3 1 793 382573066 382572277 0.000000e+00 791.0
18 TraesCS2B01G422200 chr5B 77.526 574 83 22 3622 4176 676508763 676509309 2.040000e-78 303.0
19 TraesCS2B01G422200 chr5B 81.686 344 38 12 3618 3958 692565908 692566229 3.470000e-66 263.0
20 TraesCS2B01G422200 chr5B 76.303 211 35 9 2577 2781 665605515 665605314 1.040000e-16 99.0
21 TraesCS2B01G422200 chr6D 84.085 798 106 13 1 790 303986822 303987606 0.000000e+00 750.0
22 TraesCS2B01G422200 chr6A 84.540 718 96 4 1 717 201655070 201654367 0.000000e+00 697.0
23 TraesCS2B01G422200 chr6A 94.558 147 8 0 4377 4523 21926878 21926732 1.270000e-55 228.0
24 TraesCS2B01G422200 chr6A 84.862 218 26 4 3585 3795 613631496 613631279 3.540000e-51 213.0
25 TraesCS2B01G422200 chr1A 80.137 584 70 24 3618 4177 285980389 285979828 1.180000e-105 394.0
26 TraesCS2B01G422200 chr1A 80.944 551 60 20 3623 4148 536931916 536932446 1.180000e-105 394.0
27 TraesCS2B01G422200 chr1D 79.483 580 75 25 3622 4177 431764151 431763592 5.530000e-99 372.0
28 TraesCS2B01G422200 chr1D 75.930 457 76 18 3618 4062 371581354 371581788 2.130000e-48 204.0
29 TraesCS2B01G422200 chr1D 76.667 210 34 9 2584 2787 492536168 492535968 8.000000e-18 102.0
30 TraesCS2B01G422200 chr1D 81.739 115 15 6 2345 2456 219957110 219956999 1.730000e-14 91.6
31 TraesCS2B01G422200 chr5D 78.498 586 83 24 3616 4177 382425166 382425732 1.200000e-90 344.0
32 TraesCS2B01G422200 chr5D 80.310 452 58 11 3623 4062 345185079 345184647 3.400000e-81 313.0
33 TraesCS2B01G422200 chr5D 94.558 147 8 0 4377 4523 27389658 27389804 1.270000e-55 228.0
34 TraesCS2B01G422200 chr5D 93.023 43 2 1 2476 2517 41760760 41760718 1.360000e-05 62.1
35 TraesCS2B01G422200 chr3A 78.365 587 82 23 3616 4178 639658905 639659470 5.600000e-89 339.0
36 TraesCS2B01G422200 chr3A 78.365 587 82 23 3616 4178 639665709 639666274 5.600000e-89 339.0
37 TraesCS2B01G422200 chr3A 80.752 452 53 16 3622 4062 552214006 552214434 5.640000e-84 322.0
38 TraesCS2B01G422200 chr3A 95.349 43 2 0 2481 2523 512682155 512682197 8.120000e-08 69.4
39 TraesCS2B01G422200 chr3A 94.872 39 2 0 2485 2523 725171806 725171768 1.360000e-05 62.1
40 TraesCS2B01G422200 chr3B 81.340 418 70 7 377 790 474417800 474417387 2.610000e-87 333.0
41 TraesCS2B01G422200 chr3B 76.481 557 86 15 3622 4154 16083864 16083329 1.250000e-65 261.0
42 TraesCS2B01G422200 chr3B 97.727 44 1 0 2480 2523 628472964 628473007 4.850000e-10 76.8
43 TraesCS2B01G422200 chrUn 77.568 584 86 16 3619 4179 257411698 257412259 1.220000e-80 311.0
44 TraesCS2B01G422200 chr3D 77.397 584 89 20 3618 4177 463681550 463682114 1.580000e-79 307.0
45 TraesCS2B01G422200 chr3D 80.097 412 52 18 3622 4024 19042535 19042145 3.450000e-71 279.0
46 TraesCS2B01G422200 chr3D 94.595 148 8 0 4376 4523 36177375 36177522 3.520000e-56 230.0
47 TraesCS2B01G422200 chr3D 94.595 148 8 0 4376 4523 154012436 154012289 3.520000e-56 230.0
48 TraesCS2B01G422200 chr3D 75.824 546 77 30 3633 4154 433610795 433611309 4.550000e-55 226.0
49 TraesCS2B01G422200 chr3D 77.725 211 30 10 2582 2787 588400771 588400573 3.700000e-21 113.0
50 TraesCS2B01G422200 chr3D 97.561 41 1 0 2480 2520 513623265 513623305 2.260000e-08 71.3
51 TraesCS2B01G422200 chr7D 79.956 454 57 19 3622 4062 7568387 7567955 2.040000e-78 303.0
52 TraesCS2B01G422200 chr7D 77.251 211 31 10 2582 2787 454551885 454551687 1.720000e-19 108.0
53 TraesCS2B01G422200 chr7D 76.190 210 35 9 2584 2787 192056491 192056291 3.720000e-16 97.1
54 TraesCS2B01G422200 chr7D 86.567 67 7 1 2480 2546 353937277 353937213 6.280000e-09 73.1
55 TraesCS2B01G422200 chr7D 95.455 44 2 0 2480 2523 249422599 249422556 2.260000e-08 71.3
56 TraesCS2B01G422200 chr1B 76.962 586 73 27 3587 4142 600980702 600981255 1.240000e-70 278.0
57 TraesCS2B01G422200 chr1B 75.938 453 75 15 3619 4060 372106885 372107314 7.670000e-48 202.0
58 TraesCS2B01G422200 chr5A 77.413 549 64 22 3623 4147 482791257 482791769 5.770000e-69 272.0
59 TraesCS2B01G422200 chr5A 94.595 148 8 0 4376 4523 527852157 527852010 3.520000e-56 230.0
60 TraesCS2B01G422200 chr5A 93.919 148 9 0 4376 4523 2996270 2996417 1.640000e-54 224.0
61 TraesCS2B01G422200 chr7A 95.205 146 7 0 4376 4521 521561322 521561467 9.790000e-57 231.0
62 TraesCS2B01G422200 chr7A 85.308 211 29 2 3587 3795 640444224 640444014 2.740000e-52 217.0
63 TraesCS2B01G422200 chr7A 80.870 115 16 6 2345 2456 634314744 634314855 8.060000e-13 86.1
64 TraesCS2B01G422200 chr7A 80.870 115 16 6 2345 2456 724376872 724376761 8.060000e-13 86.1
65 TraesCS2B01G422200 chr7A 86.567 67 7 1 2480 2546 391912504 391912440 6.280000e-09 73.1
66 TraesCS2B01G422200 chr7A 95.455 44 2 0 2480 2523 704895244 704895287 2.260000e-08 71.3
67 TraesCS2B01G422200 chr7B 77.143 210 33 9 2584 2787 87197728 87197528 1.720000e-19 108.0
68 TraesCS2B01G422200 chr7B 76.774 155 31 4 642 794 84240120 84240271 1.040000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G422200 chr2B 607338453 607342975 4522 True 8353.0 8353 100.000 1 4523 1 chr2B.!!$R1 4522
1 TraesCS2B01G422200 chr2B 211995679 211996252 573 False 662.0 662 87.478 76 649 1 chr2B.!!$F2 573
2 TraesCS2B01G422200 chr2B 126170158 126170676 518 False 274.0 274 77.222 3640 4154 1 chr2B.!!$F1 514
3 TraesCS2B01G422200 chr2D 516121547 516124264 2717 True 4226.0 4226 94.771 816 3532 1 chr2D.!!$R2 2716
4 TraesCS2B01G422200 chr2D 383544647 383545311 664 True 575.0 575 82.318 119 790 1 chr2D.!!$R1 671
5 TraesCS2B01G422200 chr2A 659705505 659708177 2672 True 2013.5 2636 93.643 816 3528 2 chr2A.!!$R4 2712
6 TraesCS2B01G422200 chr2A 572098054 572098806 752 True 739.0 739 84.412 38 792 1 chr2A.!!$R2 754
7 TraesCS2B01G422200 chr2A 705571916 705572448 532 True 601.0 601 87.013 1 537 1 chr2A.!!$R3 536
8 TraesCS2B01G422200 chr4A 588590502 588591284 782 True 854.0 854 86.329 1 790 1 chr4A.!!$R4 789
9 TraesCS2B01G422200 chr4A 7614097 7614661 564 True 331.0 331 78.253 3622 4177 1 chr4A.!!$R1 555
10 TraesCS2B01G422200 chr4A 82395521 82396067 546 True 252.0 252 76.056 3622 4162 1 chr4A.!!$R2 540
11 TraesCS2B01G422200 chr4B 442973143 442973903 760 True 809.0 809 85.919 28 790 1 chr4B.!!$R1 762
12 TraesCS2B01G422200 chr5B 382572277 382573066 789 True 791.0 791 84.741 1 793 1 chr5B.!!$R1 792
13 TraesCS2B01G422200 chr5B 676508763 676509309 546 False 303.0 303 77.526 3622 4176 1 chr5B.!!$F1 554
14 TraesCS2B01G422200 chr6D 303986822 303987606 784 False 750.0 750 84.085 1 790 1 chr6D.!!$F1 789
15 TraesCS2B01G422200 chr6A 201654367 201655070 703 True 697.0 697 84.540 1 717 1 chr6A.!!$R2 716
16 TraesCS2B01G422200 chr1A 285979828 285980389 561 True 394.0 394 80.137 3618 4177 1 chr1A.!!$R1 559
17 TraesCS2B01G422200 chr1A 536931916 536932446 530 False 394.0 394 80.944 3623 4148 1 chr1A.!!$F1 525
18 TraesCS2B01G422200 chr1D 431763592 431764151 559 True 372.0 372 79.483 3622 4177 1 chr1D.!!$R2 555
19 TraesCS2B01G422200 chr5D 382425166 382425732 566 False 344.0 344 78.498 3616 4177 1 chr5D.!!$F2 561
20 TraesCS2B01G422200 chr3A 639658905 639659470 565 False 339.0 339 78.365 3616 4178 1 chr3A.!!$F3 562
21 TraesCS2B01G422200 chr3A 639665709 639666274 565 False 339.0 339 78.365 3616 4178 1 chr3A.!!$F4 562
22 TraesCS2B01G422200 chr3B 16083329 16083864 535 True 261.0 261 76.481 3622 4154 1 chr3B.!!$R1 532
23 TraesCS2B01G422200 chrUn 257411698 257412259 561 False 311.0 311 77.568 3619 4179 1 chrUn.!!$F1 560
24 TraesCS2B01G422200 chr3D 463681550 463682114 564 False 307.0 307 77.397 3618 4177 1 chr3D.!!$F3 559
25 TraesCS2B01G422200 chr3D 433610795 433611309 514 False 226.0 226 75.824 3633 4154 1 chr3D.!!$F2 521
26 TraesCS2B01G422200 chr1B 600980702 600981255 553 False 278.0 278 76.962 3587 4142 1 chr1B.!!$F2 555
27 TraesCS2B01G422200 chr5A 482791257 482791769 512 False 272.0 272 77.413 3623 4147 1 chr5A.!!$F2 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
433 436 0.103208 TGCCGGCGACAAAATTTGTT 59.897 45.000 23.90 0.00 45.52 2.83 F
805 838 0.105039 GCCTAACGATCTGGACCCTG 59.895 60.000 0.00 0.00 0.00 4.45 F
812 845 0.470341 GATCTGGACCCTGGTTAGGC 59.530 60.000 0.00 0.00 43.16 3.93 F
1163 1204 0.744281 TATCCTTCTGATCGTGCGCA 59.256 50.000 5.66 5.66 34.76 6.09 F
3044 3113 1.153066 TGTTGCGCTTGGGACAGAA 60.153 52.632 9.73 0.00 42.39 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1939 1989 0.948623 TGGTTCCTGAACGCACATCG 60.949 55.000 4.09 0.00 42.02 3.84 R
1988 2038 2.348411 ACTGTTTGAACCACAGGAGG 57.652 50.000 5.14 0.00 45.20 4.30 R
2326 2378 2.644798 AGTAGACCAACAAATCTGGCCT 59.355 45.455 3.32 0.00 37.48 5.19 R
3130 3199 1.079543 GCACCGCAGATCTGTCAGT 60.080 57.895 23.38 15.07 0.00 3.41 R
4348 4466 0.031585 GTTTTCAAGGGGCCGTCAAC 59.968 55.000 0.00 0.00 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.325355 CTTCCATAGCCTTGCATGGG 58.675 55.000 19.47 10.91 37.60 4.00
24 25 1.952296 CATAGCCTTGCATGGGACTTC 59.048 52.381 19.47 3.21 0.00 3.01
26 27 1.377202 GCCTTGCATGGGACTTCGA 60.377 57.895 19.47 0.00 0.00 3.71
165 166 4.840716 AGAAGAGGAAGCTTGACATCAT 57.159 40.909 2.10 0.00 0.00 2.45
173 174 0.394762 GCTTGACATCATGGAGGCCA 60.395 55.000 5.01 0.00 38.19 5.36
221 222 1.751351 TCACCAATGCCGACACAAAAA 59.249 42.857 0.00 0.00 0.00 1.94
301 303 2.427506 GAAGGCTTGGTTCACGAATCT 58.572 47.619 3.46 0.00 0.00 2.40
428 431 1.736586 TTGTTGCCGGCGACAAAAT 59.263 47.368 45.42 0.00 44.54 1.82
433 436 0.103208 TGCCGGCGACAAAATTTGTT 59.897 45.000 23.90 0.00 45.52 2.83
458 461 2.033141 AATGCTGGCTCGTGTGCT 59.967 55.556 0.00 0.00 0.00 4.40
487 491 2.545742 GGCTTTGTTTCCAGCGTGAAAT 60.546 45.455 6.91 0.00 36.68 2.17
498 502 4.394920 TCCAGCGTGAAATATGTCCTTTTC 59.605 41.667 0.00 0.00 33.44 2.29
623 633 3.181510 CGGCTTAAATCCTTGGTTTCTCG 60.182 47.826 0.00 0.00 0.00 4.04
651 673 2.264480 CACGGGGACAAGATGCGA 59.736 61.111 0.00 0.00 0.00 5.10
656 678 0.598680 GGGGACAAGATGCGATCGAG 60.599 60.000 21.57 3.01 0.00 4.04
662 684 0.678395 AAGATGCGATCGAGGATGCT 59.322 50.000 21.57 3.45 0.00 3.79
735 768 1.480312 CCCATCCACACCTCCAAACAA 60.480 52.381 0.00 0.00 0.00 2.83
737 770 2.697751 CCATCCACACCTCCAAACAAAA 59.302 45.455 0.00 0.00 0.00 2.44
742 775 4.528596 TCCACACCTCCAAACAAAAGAAAA 59.471 37.500 0.00 0.00 0.00 2.29
743 776 5.188751 TCCACACCTCCAAACAAAAGAAAAT 59.811 36.000 0.00 0.00 0.00 1.82
751 784 6.039616 TCCAAACAAAAGAAAATCGGACAAG 58.960 36.000 0.00 0.00 0.00 3.16
776 809 1.671054 ATCTGTTTGGGGTCACGCG 60.671 57.895 3.53 3.53 0.00 6.01
793 826 1.908066 GCGTTGGAGTTGGCCTAACG 61.908 60.000 3.32 12.10 44.15 3.18
794 827 0.320073 CGTTGGAGTTGGCCTAACGA 60.320 55.000 3.32 0.00 44.15 3.85
795 828 1.674817 CGTTGGAGTTGGCCTAACGAT 60.675 52.381 3.32 0.00 44.15 3.73
796 829 2.007608 GTTGGAGTTGGCCTAACGATC 58.992 52.381 3.32 1.93 44.15 3.69
797 830 1.568504 TGGAGTTGGCCTAACGATCT 58.431 50.000 3.32 0.00 44.15 2.75
798 831 1.207089 TGGAGTTGGCCTAACGATCTG 59.793 52.381 3.32 0.00 44.15 2.90
799 832 1.473434 GGAGTTGGCCTAACGATCTGG 60.473 57.143 3.32 0.00 44.15 3.86
800 833 1.480954 GAGTTGGCCTAACGATCTGGA 59.519 52.381 3.32 0.00 44.15 3.86
801 834 1.207329 AGTTGGCCTAACGATCTGGAC 59.793 52.381 3.32 0.00 44.15 4.02
802 835 0.539986 TTGGCCTAACGATCTGGACC 59.460 55.000 3.32 0.00 0.00 4.46
803 836 1.335132 TGGCCTAACGATCTGGACCC 61.335 60.000 3.32 0.00 0.00 4.46
804 837 1.049289 GGCCTAACGATCTGGACCCT 61.049 60.000 0.00 0.00 0.00 4.34
805 838 0.105039 GCCTAACGATCTGGACCCTG 59.895 60.000 0.00 0.00 0.00 4.45
806 839 0.753262 CCTAACGATCTGGACCCTGG 59.247 60.000 0.00 0.00 0.00 4.45
807 840 1.486211 CTAACGATCTGGACCCTGGT 58.514 55.000 0.00 0.00 0.00 4.00
808 841 1.831736 CTAACGATCTGGACCCTGGTT 59.168 52.381 0.00 0.00 0.00 3.67
809 842 1.946984 AACGATCTGGACCCTGGTTA 58.053 50.000 0.00 0.00 0.00 2.85
810 843 1.486211 ACGATCTGGACCCTGGTTAG 58.514 55.000 0.00 0.00 0.00 2.34
811 844 0.753262 CGATCTGGACCCTGGTTAGG 59.247 60.000 0.00 0.00 44.18 2.69
812 845 0.470341 GATCTGGACCCTGGTTAGGC 59.530 60.000 0.00 0.00 43.16 3.93
813 846 0.988678 ATCTGGACCCTGGTTAGGCC 60.989 60.000 0.00 0.00 43.16 5.19
814 847 1.616628 CTGGACCCTGGTTAGGCCT 60.617 63.158 11.78 11.78 43.16 5.19
830 863 1.279271 GGCCTGGGACATATATTCGCT 59.721 52.381 0.00 0.00 38.20 4.93
836 869 5.419155 CCTGGGACATATATTCGCTCTTCTA 59.581 44.000 10.82 0.00 38.20 2.10
958 999 1.379576 CCGACTACCTCCCGAACCT 60.380 63.158 0.00 0.00 0.00 3.50
973 1014 0.765510 AACCTTTCGCCTTCTCCACT 59.234 50.000 0.00 0.00 0.00 4.00
989 1030 3.470888 CTGAACCGAGCCCCCGAT 61.471 66.667 0.00 0.00 0.00 4.18
990 1031 3.006728 TGAACCGAGCCCCCGATT 61.007 61.111 0.00 0.00 0.00 3.34
1028 1069 4.408821 GGCGTGGACATGGCAGGA 62.409 66.667 5.99 0.00 41.90 3.86
1034 1075 1.206811 TGGACATGGCAGGATCACCA 61.207 55.000 5.99 7.06 41.06 4.17
1089 1130 2.603473 TACCACTCCAGGTGCGCT 60.603 61.111 9.73 0.00 43.14 5.92
1155 1196 6.843333 TGTTCCAATCTCTCTATCCTTCTGAT 59.157 38.462 0.00 0.00 37.49 2.90
1163 1204 0.744281 TATCCTTCTGATCGTGCGCA 59.256 50.000 5.66 5.66 34.76 6.09
1411 1455 4.918810 AATTTGCTCTGTTTTCTCCGTT 57.081 36.364 0.00 0.00 0.00 4.44
1455 1502 4.778579 ACAGCTTCTTGCATGATGTATCT 58.221 39.130 14.47 3.82 45.94 1.98
1503 1550 2.860009 CTCTGCATATGCTCCAATGGT 58.140 47.619 27.13 0.00 42.66 3.55
1562 1609 9.908152 AAAGCAAAGTTAGTGTACCATAATTTC 57.092 29.630 0.00 0.00 0.00 2.17
1662 1710 8.732413 TGATTCAACTTCATCTTTCAAATTCG 57.268 30.769 0.00 0.00 0.00 3.34
1714 1764 2.309613 TCAATTTGCAAGTGACCAGCT 58.690 42.857 10.05 0.00 29.45 4.24
1773 1823 2.259917 TCTGCAGTCTTCCTCCATCAA 58.740 47.619 14.67 0.00 0.00 2.57
1774 1824 2.842496 TCTGCAGTCTTCCTCCATCAAT 59.158 45.455 14.67 0.00 0.00 2.57
1939 1989 7.102993 ACAATGGTTTTAATCTTGTATTGGCC 58.897 34.615 0.00 0.00 0.00 5.36
1988 2038 4.101741 ACATCTCTAATAAGCCAGGTGACC 59.898 45.833 0.00 0.00 0.00 4.02
2137 2188 6.325028 TCTGGATAGTTCTTTGCTGCTACTAT 59.675 38.462 0.00 6.46 35.38 2.12
2275 2327 3.379372 CCCAGTTTAATGCTCCATCTGTG 59.621 47.826 0.00 0.00 0.00 3.66
2326 2378 5.559770 TGATTTGTGATGACAGGCTTTCTA 58.440 37.500 1.90 0.00 32.26 2.10
2360 2412 6.296026 TGTTGGTCTACTGCTAAAGTTGAAT 58.704 36.000 0.00 0.00 41.41 2.57
2361 2413 6.770785 TGTTGGTCTACTGCTAAAGTTGAATT 59.229 34.615 0.00 0.00 41.41 2.17
2397 2449 8.919145 ACTAATTTTTGGTTACTTTGTCCATGA 58.081 29.630 0.00 0.00 0.00 3.07
2460 2512 9.777297 AATTTTGCAGGTTAATTTGAATGTACT 57.223 25.926 0.00 0.00 0.00 2.73
2546 2598 7.187824 TCAGTATTAATATGGATCAGAGGGC 57.812 40.000 0.00 0.00 0.00 5.19
2547 2599 6.962311 TCAGTATTAATATGGATCAGAGGGCT 59.038 38.462 0.00 0.00 0.00 5.19
2559 2611 3.902218 TCAGAGGGCTTATTGGAAATGG 58.098 45.455 0.00 0.00 0.00 3.16
2564 2616 4.687976 AGGGCTTATTGGAAATGGACTTT 58.312 39.130 0.00 0.00 0.00 2.66
2655 2711 4.381411 GTTGGGCAACTGGTCTAGATATC 58.619 47.826 0.00 0.00 38.25 1.63
2766 2829 2.683968 TGAGCGAATACTGTGGTCAAC 58.316 47.619 0.00 0.00 37.21 3.18
2930 2999 3.496331 GGACAAATTCTGAGGAAACCCA 58.504 45.455 0.00 0.00 34.90 4.51
2931 3000 3.507622 GGACAAATTCTGAGGAAACCCAG 59.492 47.826 0.00 0.00 34.90 4.45
2997 3066 6.915349 AGCTAGAGTTGTGTACTAGTTTCAG 58.085 40.000 0.00 0.00 37.17 3.02
3005 3074 4.243270 GTGTACTAGTTTCAGGCATCGTT 58.757 43.478 0.00 0.00 0.00 3.85
3044 3113 1.153066 TGTTGCGCTTGGGACAGAA 60.153 52.632 9.73 0.00 42.39 3.02
3125 3194 3.444703 AGAACTGATGACAGATACGGC 57.555 47.619 0.00 0.00 46.03 5.68
3130 3199 2.101415 CTGATGACAGATACGGCCAAGA 59.899 50.000 2.24 0.00 46.03 3.02
3233 3302 5.437191 AAGGGACAGGTAAATCTGTAAGG 57.563 43.478 0.00 0.00 46.76 2.69
3234 3303 3.200165 AGGGACAGGTAAATCTGTAAGGC 59.800 47.826 0.00 0.00 46.76 4.35
3241 3310 6.212791 ACAGGTAAATCTGTAAGGCTGAGTAA 59.787 38.462 0.00 0.00 45.18 2.24
3250 3319 7.717568 TCTGTAAGGCTGAGTAATATCAAGAC 58.282 38.462 0.00 0.00 0.00 3.01
3259 3328 7.148639 GCTGAGTAATATCAAGACGTTGTTTCA 60.149 37.037 0.00 0.00 34.98 2.69
3274 3343 2.258755 GTTTCACGCAAACAGCACTTT 58.741 42.857 5.85 0.00 43.60 2.66
3279 3348 2.973224 CACGCAAACAGCACTTTACATC 59.027 45.455 0.00 0.00 46.13 3.06
3333 3402 4.322049 CCATGTAACAGGTCGACTTTCTCT 60.322 45.833 16.46 0.00 0.00 3.10
3355 3424 5.419788 TCTCTTTGGCAATTGTATTGAGCAT 59.580 36.000 7.40 0.00 0.00 3.79
3414 3483 3.499737 GGGACACGAAGCATGGCG 61.500 66.667 0.00 0.00 0.00 5.69
3463 3532 3.130164 GGTAACTTTCTACGAGAGGTCCC 59.870 52.174 0.00 0.00 0.00 4.46
3532 3601 3.138884 TGGCACAATAGAAGACTTGCA 57.861 42.857 0.00 0.00 31.92 4.08
3533 3602 2.813754 TGGCACAATAGAAGACTTGCAC 59.186 45.455 0.00 0.00 31.92 4.57
3534 3603 2.813754 GGCACAATAGAAGACTTGCACA 59.186 45.455 0.00 0.00 30.50 4.57
3535 3604 3.120060 GGCACAATAGAAGACTTGCACAG 60.120 47.826 0.00 0.00 30.50 3.66
3536 3605 3.120060 GCACAATAGAAGACTTGCACAGG 60.120 47.826 0.00 0.00 0.00 4.00
3537 3606 3.438087 CACAATAGAAGACTTGCACAGGG 59.562 47.826 0.00 0.00 0.00 4.45
3538 3607 3.327757 ACAATAGAAGACTTGCACAGGGA 59.672 43.478 0.00 0.00 0.00 4.20
3539 3608 4.202461 ACAATAGAAGACTTGCACAGGGAA 60.202 41.667 0.00 0.00 0.00 3.97
3540 3609 4.640771 ATAGAAGACTTGCACAGGGAAA 57.359 40.909 0.00 0.00 0.00 3.13
3541 3610 2.576615 AGAAGACTTGCACAGGGAAAC 58.423 47.619 0.00 0.00 0.00 2.78
3542 3611 2.173569 AGAAGACTTGCACAGGGAAACT 59.826 45.455 0.00 0.00 0.00 2.66
3551 3620 4.772118 AGGGAAACTGAGGGTGGT 57.228 55.556 0.00 0.00 0.00 4.16
3552 3621 3.906115 AGGGAAACTGAGGGTGGTA 57.094 52.632 0.00 0.00 0.00 3.25
3553 3622 1.657804 AGGGAAACTGAGGGTGGTAG 58.342 55.000 0.00 0.00 0.00 3.18
3554 3623 1.151413 AGGGAAACTGAGGGTGGTAGA 59.849 52.381 0.00 0.00 0.00 2.59
3555 3624 2.197465 GGGAAACTGAGGGTGGTAGAT 58.803 52.381 0.00 0.00 0.00 1.98
3556 3625 3.013648 AGGGAAACTGAGGGTGGTAGATA 59.986 47.826 0.00 0.00 0.00 1.98
3557 3626 3.134262 GGGAAACTGAGGGTGGTAGATAC 59.866 52.174 0.00 0.00 0.00 2.24
3558 3627 3.181478 GGAAACTGAGGGTGGTAGATACG 60.181 52.174 0.00 0.00 0.00 3.06
3559 3628 3.377253 AACTGAGGGTGGTAGATACGA 57.623 47.619 0.00 0.00 0.00 3.43
3560 3629 3.596940 ACTGAGGGTGGTAGATACGAT 57.403 47.619 0.00 0.00 0.00 3.73
3561 3630 3.912248 ACTGAGGGTGGTAGATACGATT 58.088 45.455 0.00 0.00 0.00 3.34
3562 3631 3.637229 ACTGAGGGTGGTAGATACGATTG 59.363 47.826 0.00 0.00 0.00 2.67
3563 3632 2.364324 TGAGGGTGGTAGATACGATTGC 59.636 50.000 0.00 0.00 0.00 3.56
3564 3633 2.364324 GAGGGTGGTAGATACGATTGCA 59.636 50.000 0.00 0.00 0.00 4.08
3565 3634 2.972713 AGGGTGGTAGATACGATTGCAT 59.027 45.455 0.00 0.00 0.00 3.96
3566 3635 4.157246 AGGGTGGTAGATACGATTGCATA 58.843 43.478 0.00 0.00 0.00 3.14
3567 3636 4.591498 AGGGTGGTAGATACGATTGCATAA 59.409 41.667 0.00 0.00 0.00 1.90
3568 3637 5.248477 AGGGTGGTAGATACGATTGCATAAT 59.752 40.000 0.00 0.00 0.00 1.28
3569 3638 6.439375 AGGGTGGTAGATACGATTGCATAATA 59.561 38.462 0.00 0.00 0.00 0.98
3570 3639 6.534079 GGGTGGTAGATACGATTGCATAATAC 59.466 42.308 0.00 0.00 0.00 1.89
3571 3640 6.534079 GGTGGTAGATACGATTGCATAATACC 59.466 42.308 0.00 0.00 0.00 2.73
3572 3641 6.252869 GTGGTAGATACGATTGCATAATACCG 59.747 42.308 0.00 0.00 0.00 4.02
3573 3642 5.747197 GGTAGATACGATTGCATAATACCGG 59.253 44.000 0.00 0.00 0.00 5.28
3574 3643 5.401531 AGATACGATTGCATAATACCGGT 57.598 39.130 13.98 13.98 0.00 5.28
3575 3644 5.168569 AGATACGATTGCATAATACCGGTG 58.831 41.667 19.93 0.00 0.00 4.94
3576 3645 2.489971 ACGATTGCATAATACCGGTGG 58.510 47.619 19.93 2.34 0.00 4.61
3577 3646 2.158871 ACGATTGCATAATACCGGTGGT 60.159 45.455 19.93 7.28 40.16 4.16
3578 3647 2.875933 CGATTGCATAATACCGGTGGTT 59.124 45.455 19.93 14.64 37.09 3.67
3579 3648 3.303725 CGATTGCATAATACCGGTGGTTG 60.304 47.826 19.93 10.67 37.09 3.77
3580 3649 2.791347 TGCATAATACCGGTGGTTGT 57.209 45.000 19.93 7.69 37.09 3.32
3581 3650 2.360844 TGCATAATACCGGTGGTTGTG 58.639 47.619 19.93 19.87 37.09 3.33
3582 3651 2.027100 TGCATAATACCGGTGGTTGTGA 60.027 45.455 25.01 13.29 37.09 3.58
3583 3652 2.353579 GCATAATACCGGTGGTTGTGAC 59.646 50.000 25.01 16.35 37.09 3.67
3584 3653 3.869065 CATAATACCGGTGGTTGTGACT 58.131 45.455 19.93 0.00 37.09 3.41
3585 3654 4.681244 GCATAATACCGGTGGTTGTGACTA 60.681 45.833 25.01 2.64 37.09 2.59
3586 3655 5.607477 CATAATACCGGTGGTTGTGACTAT 58.393 41.667 19.93 0.00 37.09 2.12
3587 3656 4.563140 AATACCGGTGGTTGTGACTATT 57.437 40.909 19.93 1.15 37.09 1.73
3588 3657 2.943036 ACCGGTGGTTGTGACTATTT 57.057 45.000 6.12 0.00 27.29 1.40
3589 3658 3.217681 ACCGGTGGTTGTGACTATTTT 57.782 42.857 6.12 0.00 27.29 1.82
3590 3659 3.558033 ACCGGTGGTTGTGACTATTTTT 58.442 40.909 6.12 0.00 27.29 1.94
3620 3693 8.307483 AGAAAACTTTCGATCTATGAAGACAGA 58.693 33.333 0.00 0.00 41.92 3.41
3795 3881 1.962100 GTCGTGCTAAGGCCCTATAGT 59.038 52.381 0.00 0.00 37.74 2.12
3796 3882 2.030096 GTCGTGCTAAGGCCCTATAGTC 60.030 54.545 0.00 0.00 37.74 2.59
3797 3883 1.068472 CGTGCTAAGGCCCTATAGTCG 60.068 57.143 0.00 6.21 37.74 4.18
3798 3884 1.962100 GTGCTAAGGCCCTATAGTCGT 59.038 52.381 0.00 0.00 37.74 4.34
3799 3885 1.961394 TGCTAAGGCCCTATAGTCGTG 59.039 52.381 0.00 0.00 37.74 4.35
3800 3886 1.336980 GCTAAGGCCCTATAGTCGTGC 60.337 57.143 0.00 0.00 0.00 5.34
3801 3887 2.240279 CTAAGGCCCTATAGTCGTGCT 58.760 52.381 0.00 0.00 0.00 4.40
3802 3888 2.376695 AAGGCCCTATAGTCGTGCTA 57.623 50.000 0.00 0.00 0.00 3.49
3803 3889 2.376695 AGGCCCTATAGTCGTGCTAA 57.623 50.000 0.00 0.00 32.72 3.09
3804 3890 2.240279 AGGCCCTATAGTCGTGCTAAG 58.760 52.381 0.00 0.00 32.72 2.18
3805 3891 1.272769 GGCCCTATAGTCGTGCTAAGG 59.727 57.143 0.00 0.00 32.72 2.69
3806 3892 1.336980 GCCCTATAGTCGTGCTAAGGC 60.337 57.143 0.00 0.00 37.31 4.35
3807 3893 1.272769 CCCTATAGTCGTGCTAAGGCC 59.727 57.143 0.00 0.00 37.74 5.19
3808 3894 1.272769 CCTATAGTCGTGCTAAGGCCC 59.727 57.143 0.00 0.00 37.74 5.80
3809 3895 2.240279 CTATAGTCGTGCTAAGGCCCT 58.760 52.381 0.00 0.00 37.74 5.19
3810 3896 2.376695 ATAGTCGTGCTAAGGCCCTA 57.623 50.000 0.00 0.00 37.74 3.53
3811 3897 2.376695 TAGTCGTGCTAAGGCCCTAT 57.623 50.000 0.00 0.00 37.74 2.57
3812 3898 2.376695 AGTCGTGCTAAGGCCCTATA 57.623 50.000 0.00 0.00 37.74 1.31
3813 3899 2.240279 AGTCGTGCTAAGGCCCTATAG 58.760 52.381 0.00 0.67 37.74 1.31
3824 3910 1.059913 GCCCTATAGGACCAGCACAT 58.940 55.000 21.07 0.00 38.24 3.21
3844 3930 2.178273 GAACAACAATCGCCGCCC 59.822 61.111 0.00 0.00 0.00 6.13
3853 3939 4.838152 TCGCCGCCCATGAAGAGC 62.838 66.667 0.00 0.00 0.00 4.09
3933 4021 0.447801 CCGAGCAAATCCAAAGGACG 59.552 55.000 0.00 0.00 32.98 4.79
3986 4084 1.860641 TAGACACACCATCGGGACAT 58.139 50.000 0.00 0.00 38.05 3.06
3987 4085 1.860641 AGACACACCATCGGGACATA 58.139 50.000 0.00 0.00 38.05 2.29
3997 4095 4.141482 ACCATCGGGACATAAGCTAAACAT 60.141 41.667 0.00 0.00 38.05 2.71
4025 4129 6.678857 AGAACCTTATTCCATCTTTAGGGAGT 59.321 38.462 0.00 0.00 36.79 3.85
4087 4205 5.414765 AGAAACAACTGAAAACGAAGTCCTT 59.585 36.000 0.00 0.00 45.00 3.36
4099 4217 0.472471 AAGTCCTTCCGTTGGCAAGA 59.528 50.000 0.00 0.00 0.00 3.02
4184 4302 3.698382 GCGAGAGGCAGACGATTG 58.302 61.111 0.00 0.00 42.87 2.67
4185 4303 1.153745 GCGAGAGGCAGACGATTGT 60.154 57.895 0.00 0.00 42.87 2.71
4186 4304 0.100682 GCGAGAGGCAGACGATTGTA 59.899 55.000 0.00 0.00 42.87 2.41
4187 4305 1.269309 GCGAGAGGCAGACGATTGTAT 60.269 52.381 0.00 0.00 42.87 2.29
4188 4306 2.031069 GCGAGAGGCAGACGATTGTATA 60.031 50.000 0.00 0.00 42.87 1.47
4189 4307 3.550233 GCGAGAGGCAGACGATTGTATAA 60.550 47.826 0.00 0.00 42.87 0.98
4190 4308 4.799678 CGAGAGGCAGACGATTGTATAAT 58.200 43.478 0.00 0.00 0.00 1.28
4191 4309 5.619309 GCGAGAGGCAGACGATTGTATAATA 60.619 44.000 0.00 0.00 42.87 0.98
4192 4310 5.795939 CGAGAGGCAGACGATTGTATAATAC 59.204 44.000 0.00 0.00 0.00 1.89
4193 4311 5.700846 AGAGGCAGACGATTGTATAATACG 58.299 41.667 0.00 0.00 0.00 3.06
4194 4312 4.806330 AGGCAGACGATTGTATAATACGG 58.194 43.478 0.00 0.00 0.00 4.02
4195 4313 4.280174 AGGCAGACGATTGTATAATACGGT 59.720 41.667 0.00 0.00 0.00 4.83
4196 4314 4.384846 GGCAGACGATTGTATAATACGGTG 59.615 45.833 0.00 0.00 0.00 4.94
4197 4315 4.384846 GCAGACGATTGTATAATACGGTGG 59.615 45.833 0.00 0.00 0.00 4.61
4198 4316 5.526115 CAGACGATTGTATAATACGGTGGT 58.474 41.667 0.00 0.00 0.00 4.16
4199 4317 5.981315 CAGACGATTGTATAATACGGTGGTT 59.019 40.000 0.00 0.00 0.00 3.67
4200 4318 5.981315 AGACGATTGTATAATACGGTGGTTG 59.019 40.000 0.00 0.00 0.00 3.77
4201 4319 5.663456 ACGATTGTATAATACGGTGGTTGT 58.337 37.500 0.00 0.00 0.00 3.32
4202 4320 5.521010 ACGATTGTATAATACGGTGGTTGTG 59.479 40.000 0.00 0.00 0.00 3.33
4203 4321 5.749588 CGATTGTATAATACGGTGGTTGTGA 59.250 40.000 0.00 0.00 0.00 3.58
4204 4322 6.291955 CGATTGTATAATACGGTGGTTGTGAC 60.292 42.308 0.00 0.00 0.00 3.67
4205 4323 5.664294 TGTATAATACGGTGGTTGTGACT 57.336 39.130 0.00 0.00 0.00 3.41
4206 4324 5.653507 TGTATAATACGGTGGTTGTGACTC 58.346 41.667 0.00 0.00 0.00 3.36
4207 4325 4.811969 ATAATACGGTGGTTGTGACTCA 57.188 40.909 0.00 0.00 0.00 3.41
4208 4326 2.743636 ATACGGTGGTTGTGACTCAG 57.256 50.000 0.00 0.00 0.00 3.35
4209 4327 1.694844 TACGGTGGTTGTGACTCAGA 58.305 50.000 0.00 0.00 0.00 3.27
4210 4328 0.828022 ACGGTGGTTGTGACTCAGAA 59.172 50.000 0.00 0.00 0.00 3.02
4211 4329 1.208535 ACGGTGGTTGTGACTCAGAAA 59.791 47.619 0.00 0.00 0.00 2.52
4212 4330 1.867233 CGGTGGTTGTGACTCAGAAAG 59.133 52.381 0.00 0.00 0.00 2.62
4213 4331 1.604278 GGTGGTTGTGACTCAGAAAGC 59.396 52.381 0.00 0.00 0.00 3.51
4214 4332 2.288666 GTGGTTGTGACTCAGAAAGCA 58.711 47.619 3.28 3.28 0.00 3.91
4215 4333 2.289002 GTGGTTGTGACTCAGAAAGCAG 59.711 50.000 6.55 0.00 31.30 4.24
4216 4334 2.170397 TGGTTGTGACTCAGAAAGCAGA 59.830 45.455 3.28 0.00 0.00 4.26
4217 4335 3.206150 GGTTGTGACTCAGAAAGCAGAA 58.794 45.455 0.00 0.00 0.00 3.02
4218 4336 3.627577 GGTTGTGACTCAGAAAGCAGAAA 59.372 43.478 0.00 0.00 0.00 2.52
4219 4337 4.276926 GGTTGTGACTCAGAAAGCAGAAAT 59.723 41.667 0.00 0.00 0.00 2.17
4220 4338 5.447573 GTTGTGACTCAGAAAGCAGAAATC 58.552 41.667 0.00 0.00 0.00 2.17
4221 4339 3.742882 TGTGACTCAGAAAGCAGAAATCG 59.257 43.478 0.00 0.00 0.00 3.34
4222 4340 3.990469 GTGACTCAGAAAGCAGAAATCGA 59.010 43.478 0.00 0.00 0.00 3.59
4223 4341 4.629200 GTGACTCAGAAAGCAGAAATCGAT 59.371 41.667 0.00 0.00 0.00 3.59
4224 4342 4.628766 TGACTCAGAAAGCAGAAATCGATG 59.371 41.667 0.00 0.00 0.00 3.84
4225 4343 3.373439 ACTCAGAAAGCAGAAATCGATGC 59.627 43.478 0.00 0.00 42.87 3.91
4226 4344 3.337358 TCAGAAAGCAGAAATCGATGCA 58.663 40.909 11.05 0.00 45.01 3.96
4227 4345 3.943381 TCAGAAAGCAGAAATCGATGCAT 59.057 39.130 11.05 0.00 45.01 3.96
4228 4346 4.397103 TCAGAAAGCAGAAATCGATGCATT 59.603 37.500 11.05 5.30 45.01 3.56
4229 4347 4.499399 CAGAAAGCAGAAATCGATGCATTG 59.501 41.667 7.70 7.70 45.01 2.82
4230 4348 2.486951 AGCAGAAATCGATGCATTGC 57.513 45.000 9.26 9.03 45.01 3.56
4231 4349 1.746787 AGCAGAAATCGATGCATTGCA 59.253 42.857 14.72 14.72 45.01 4.08
4232 4350 2.164827 AGCAGAAATCGATGCATTGCAA 59.835 40.909 16.46 0.00 43.62 4.08
4233 4351 3.120792 GCAGAAATCGATGCATTGCAAT 58.879 40.909 16.46 5.99 43.62 3.56
4234 4352 3.181774 GCAGAAATCGATGCATTGCAATC 59.818 43.478 16.46 12.21 43.62 2.67
4235 4353 4.607955 CAGAAATCGATGCATTGCAATCT 58.392 39.130 16.46 9.45 43.62 2.40
4236 4354 4.675565 CAGAAATCGATGCATTGCAATCTC 59.324 41.667 16.46 8.01 43.62 2.75
4237 4355 4.337274 AGAAATCGATGCATTGCAATCTCA 59.663 37.500 16.46 10.97 43.62 3.27
4238 4356 4.642445 AATCGATGCATTGCAATCTCAA 57.358 36.364 16.46 0.00 43.62 3.02
4239 4357 4.642445 ATCGATGCATTGCAATCTCAAA 57.358 36.364 16.46 0.81 43.62 2.69
4240 4358 4.023739 TCGATGCATTGCAATCTCAAAG 57.976 40.909 16.46 8.91 43.62 2.77
4241 4359 3.441222 TCGATGCATTGCAATCTCAAAGT 59.559 39.130 16.46 0.00 43.62 2.66
4242 4360 3.789756 CGATGCATTGCAATCTCAAAGTC 59.210 43.478 16.46 4.31 43.62 3.01
4243 4361 3.206034 TGCATTGCAATCTCAAAGTCG 57.794 42.857 9.53 0.00 34.76 4.18
4244 4362 2.553602 TGCATTGCAATCTCAAAGTCGT 59.446 40.909 9.53 0.00 34.76 4.34
4245 4363 3.004629 TGCATTGCAATCTCAAAGTCGTT 59.995 39.130 9.53 0.00 34.76 3.85
4246 4364 3.362831 GCATTGCAATCTCAAAGTCGTTG 59.637 43.478 9.53 0.00 38.71 4.10
4247 4365 4.786507 CATTGCAATCTCAAAGTCGTTGA 58.213 39.130 9.53 1.17 44.20 3.18
4248 4366 4.891627 TTGCAATCTCAAAGTCGTTGAA 57.108 36.364 0.00 0.00 45.67 2.69
4249 4367 4.472691 TGCAATCTCAAAGTCGTTGAAG 57.527 40.909 2.79 0.00 45.67 3.02
4250 4368 3.876914 TGCAATCTCAAAGTCGTTGAAGT 59.123 39.130 2.79 0.00 45.67 3.01
4251 4369 4.024893 TGCAATCTCAAAGTCGTTGAAGTC 60.025 41.667 2.79 0.00 45.67 3.01
4252 4370 4.611581 GCAATCTCAAAGTCGTTGAAGTCC 60.612 45.833 2.79 0.00 45.67 3.85
4253 4371 3.812156 TCTCAAAGTCGTTGAAGTCCA 57.188 42.857 2.79 0.00 45.67 4.02
4254 4372 3.454375 TCTCAAAGTCGTTGAAGTCCAC 58.546 45.455 2.79 0.00 45.67 4.02
4255 4373 3.132289 TCTCAAAGTCGTTGAAGTCCACT 59.868 43.478 2.79 0.00 45.67 4.00
4256 4374 3.194861 TCAAAGTCGTTGAAGTCCACTG 58.805 45.455 0.00 0.00 43.43 3.66
4257 4375 2.936498 CAAAGTCGTTGAAGTCCACTGT 59.064 45.455 0.00 0.00 39.87 3.55
4258 4376 4.116961 CAAAGTCGTTGAAGTCCACTGTA 58.883 43.478 0.00 0.00 39.87 2.74
4259 4377 3.366440 AGTCGTTGAAGTCCACTGTAC 57.634 47.619 0.00 0.00 0.00 2.90
4260 4378 2.035576 AGTCGTTGAAGTCCACTGTACC 59.964 50.000 0.00 0.00 0.00 3.34
4261 4379 1.342174 TCGTTGAAGTCCACTGTACCC 59.658 52.381 0.00 0.00 0.00 3.69
4262 4380 1.607251 CGTTGAAGTCCACTGTACCCC 60.607 57.143 0.00 0.00 0.00 4.95
4263 4381 1.061546 TTGAAGTCCACTGTACCCCC 58.938 55.000 0.00 0.00 0.00 5.40
4264 4382 0.104882 TGAAGTCCACTGTACCCCCA 60.105 55.000 0.00 0.00 0.00 4.96
4265 4383 1.286248 GAAGTCCACTGTACCCCCAT 58.714 55.000 0.00 0.00 0.00 4.00
4266 4384 0.991920 AAGTCCACTGTACCCCCATG 59.008 55.000 0.00 0.00 0.00 3.66
4267 4385 0.178873 AGTCCACTGTACCCCCATGT 60.179 55.000 0.00 0.00 0.00 3.21
4268 4386 0.696501 GTCCACTGTACCCCCATGTT 59.303 55.000 0.00 0.00 0.00 2.71
4269 4387 1.074889 GTCCACTGTACCCCCATGTTT 59.925 52.381 0.00 0.00 0.00 2.83
4270 4388 1.783979 TCCACTGTACCCCCATGTTTT 59.216 47.619 0.00 0.00 0.00 2.43
4271 4389 1.892474 CCACTGTACCCCCATGTTTTG 59.108 52.381 0.00 0.00 0.00 2.44
4272 4390 2.593026 CACTGTACCCCCATGTTTTGT 58.407 47.619 0.00 0.00 0.00 2.83
4273 4391 2.962421 CACTGTACCCCCATGTTTTGTT 59.038 45.455 0.00 0.00 0.00 2.83
4274 4392 3.386402 CACTGTACCCCCATGTTTTGTTT 59.614 43.478 0.00 0.00 0.00 2.83
4275 4393 4.034410 ACTGTACCCCCATGTTTTGTTTT 58.966 39.130 0.00 0.00 0.00 2.43
4276 4394 4.471747 ACTGTACCCCCATGTTTTGTTTTT 59.528 37.500 0.00 0.00 0.00 1.94
4277 4395 5.024785 TGTACCCCCATGTTTTGTTTTTC 57.975 39.130 0.00 0.00 0.00 2.29
4278 4396 3.186702 ACCCCCATGTTTTGTTTTTCG 57.813 42.857 0.00 0.00 0.00 3.46
4279 4397 2.502130 ACCCCCATGTTTTGTTTTTCGT 59.498 40.909 0.00 0.00 0.00 3.85
4280 4398 3.127589 CCCCCATGTTTTGTTTTTCGTC 58.872 45.455 0.00 0.00 0.00 4.20
4281 4399 3.181470 CCCCCATGTTTTGTTTTTCGTCT 60.181 43.478 0.00 0.00 0.00 4.18
4282 4400 4.438148 CCCCATGTTTTGTTTTTCGTCTT 58.562 39.130 0.00 0.00 0.00 3.01
4283 4401 4.873259 CCCCATGTTTTGTTTTTCGTCTTT 59.127 37.500 0.00 0.00 0.00 2.52
4284 4402 5.352846 CCCCATGTTTTGTTTTTCGTCTTTT 59.647 36.000 0.00 0.00 0.00 2.27
4285 4403 6.128145 CCCCATGTTTTGTTTTTCGTCTTTTT 60.128 34.615 0.00 0.00 0.00 1.94
4315 4433 2.895242 AGCAGAGCTCCCAATTTCTT 57.105 45.000 10.93 0.00 30.62 2.52
4316 4434 3.166560 AGCAGAGCTCCCAATTTCTTT 57.833 42.857 10.93 0.00 30.62 2.52
4317 4435 3.087781 AGCAGAGCTCCCAATTTCTTTC 58.912 45.455 10.93 0.00 30.62 2.62
4318 4436 2.821969 GCAGAGCTCCCAATTTCTTTCA 59.178 45.455 10.93 0.00 0.00 2.69
4319 4437 3.446516 GCAGAGCTCCCAATTTCTTTCAT 59.553 43.478 10.93 0.00 0.00 2.57
4320 4438 4.081807 GCAGAGCTCCCAATTTCTTTCATT 60.082 41.667 10.93 0.00 0.00 2.57
4321 4439 5.648572 CAGAGCTCCCAATTTCTTTCATTC 58.351 41.667 10.93 0.00 0.00 2.67
4322 4440 5.184479 CAGAGCTCCCAATTTCTTTCATTCA 59.816 40.000 10.93 0.00 0.00 2.57
4323 4441 5.776716 AGAGCTCCCAATTTCTTTCATTCAA 59.223 36.000 10.93 0.00 0.00 2.69
4324 4442 6.268387 AGAGCTCCCAATTTCTTTCATTCAAA 59.732 34.615 10.93 0.00 0.00 2.69
4325 4443 6.829849 AGCTCCCAATTTCTTTCATTCAAAA 58.170 32.000 0.00 0.00 0.00 2.44
4326 4444 7.455891 AGCTCCCAATTTCTTTCATTCAAAAT 58.544 30.769 0.00 0.00 0.00 1.82
4327 4445 7.389607 AGCTCCCAATTTCTTTCATTCAAAATG 59.610 33.333 0.00 0.00 0.00 2.32
4328 4446 7.388500 GCTCCCAATTTCTTTCATTCAAAATGA 59.612 33.333 0.00 0.00 0.00 2.57
4329 4447 9.275398 CTCCCAATTTCTTTCATTCAAAATGAA 57.725 29.630 10.28 10.28 41.09 2.57
4330 4448 9.624373 TCCCAATTTCTTTCATTCAAAATGAAA 57.376 25.926 20.62 20.62 43.34 2.69
4331 4449 9.667989 CCCAATTTCTTTCATTCAAAATGAAAC 57.332 29.630 18.91 0.00 41.46 2.78
4353 4471 5.441700 CTGATGATACAGTTGTCGTTGAC 57.558 43.478 0.00 0.00 33.73 3.18
4354 4472 3.917985 TGATGATACAGTTGTCGTTGACG 59.082 43.478 0.00 0.00 41.45 4.35
4355 4473 2.668250 TGATACAGTTGTCGTTGACGG 58.332 47.619 3.48 0.00 40.29 4.79
4356 4474 1.389106 GATACAGTTGTCGTTGACGGC 59.611 52.381 0.47 0.47 45.40 5.68
4357 4475 0.598158 TACAGTTGTCGTTGACGGCC 60.598 55.000 5.62 0.00 44.42 6.13
4358 4476 2.280592 AGTTGTCGTTGACGGCCC 60.281 61.111 5.62 0.00 44.42 5.80
4359 4477 3.351416 GTTGTCGTTGACGGCCCC 61.351 66.667 5.62 0.00 44.42 5.80
4360 4478 3.552384 TTGTCGTTGACGGCCCCT 61.552 61.111 5.62 0.00 44.42 4.79
4361 4479 3.109592 TTGTCGTTGACGGCCCCTT 62.110 57.895 5.62 0.00 44.42 3.95
4362 4480 3.047877 GTCGTTGACGGCCCCTTG 61.048 66.667 0.00 0.00 38.15 3.61
4363 4481 3.235481 TCGTTGACGGCCCCTTGA 61.235 61.111 0.00 0.00 40.29 3.02
4364 4482 2.281208 CGTTGACGGCCCCTTGAA 60.281 61.111 0.00 0.00 35.37 2.69
4365 4483 1.894756 CGTTGACGGCCCCTTGAAA 60.895 57.895 0.00 0.00 35.37 2.69
4366 4484 1.448922 CGTTGACGGCCCCTTGAAAA 61.449 55.000 0.00 0.00 35.37 2.29
4367 4485 0.031585 GTTGACGGCCCCTTGAAAAC 59.968 55.000 0.00 0.00 0.00 2.43
4368 4486 1.448922 TTGACGGCCCCTTGAAAACG 61.449 55.000 0.00 0.00 0.00 3.60
4369 4487 1.598685 GACGGCCCCTTGAAAACGA 60.599 57.895 0.00 0.00 0.00 3.85
4370 4488 1.152922 ACGGCCCCTTGAAAACGAA 60.153 52.632 0.00 0.00 0.00 3.85
4371 4489 0.752376 ACGGCCCCTTGAAAACGAAA 60.752 50.000 0.00 0.00 0.00 3.46
4372 4490 0.039527 CGGCCCCTTGAAAACGAAAG 60.040 55.000 0.00 0.00 0.00 2.62
4373 4491 0.319555 GGCCCCTTGAAAACGAAAGC 60.320 55.000 0.00 0.00 0.00 3.51
4374 4492 0.673985 GCCCCTTGAAAACGAAAGCT 59.326 50.000 0.00 0.00 0.00 3.74
4375 4493 1.068588 GCCCCTTGAAAACGAAAGCTT 59.931 47.619 0.00 0.00 0.00 3.74
4376 4494 2.483013 GCCCCTTGAAAACGAAAGCTTT 60.483 45.455 12.53 12.53 31.02 3.51
4377 4495 3.123050 CCCCTTGAAAACGAAAGCTTTG 58.877 45.455 18.30 11.41 28.00 2.77
4378 4496 3.430236 CCCCTTGAAAACGAAAGCTTTGT 60.430 43.478 18.30 12.06 28.00 2.83
4379 4497 4.180817 CCCTTGAAAACGAAAGCTTTGTT 58.819 39.130 18.30 17.07 28.00 2.83
4380 4498 4.032786 CCCTTGAAAACGAAAGCTTTGTTG 59.967 41.667 18.30 8.72 28.00 3.33
4381 4499 4.032786 CCTTGAAAACGAAAGCTTTGTTGG 59.967 41.667 18.30 13.00 28.00 3.77
4382 4500 4.442375 TGAAAACGAAAGCTTTGTTGGA 57.558 36.364 18.30 6.40 28.00 3.53
4383 4501 4.810790 TGAAAACGAAAGCTTTGTTGGAA 58.189 34.783 18.30 7.54 28.00 3.53
4384 4502 5.230942 TGAAAACGAAAGCTTTGTTGGAAA 58.769 33.333 18.30 6.05 28.00 3.13
4403 4521 7.936496 TGGAAACATGAGCAAATTACTATGA 57.064 32.000 0.00 0.00 33.40 2.15
4404 4522 7.988737 TGGAAACATGAGCAAATTACTATGAG 58.011 34.615 0.00 0.00 33.40 2.90
4405 4523 7.828717 TGGAAACATGAGCAAATTACTATGAGA 59.171 33.333 0.00 0.00 33.40 3.27
4406 4524 8.844244 GGAAACATGAGCAAATTACTATGAGAT 58.156 33.333 0.00 0.00 0.00 2.75
4415 4533 9.778741 AGCAAATTACTATGAGATTTAATCCGA 57.221 29.630 0.78 0.00 0.00 4.55
4475 4593 7.878408 GATTAAACTAATCGTGCAAACTAGC 57.122 36.000 0.00 0.00 35.68 3.42
4476 4594 6.788684 TTAAACTAATCGTGCAAACTAGCA 57.211 33.333 0.00 0.00 43.35 3.49
4477 4595 8.122952 GATTAAACTAATCGTGCAAACTAGCAT 58.877 33.333 0.00 0.00 39.75 3.79
4496 4614 6.721704 AGCATAGTAGATGAACAGATCACA 57.278 37.500 0.00 0.00 41.93 3.58
4497 4615 7.300556 AGCATAGTAGATGAACAGATCACAT 57.699 36.000 0.00 0.00 41.93 3.21
4498 4616 7.153315 AGCATAGTAGATGAACAGATCACATG 58.847 38.462 0.00 0.00 41.93 3.21
4499 4617 6.927936 GCATAGTAGATGAACAGATCACATGT 59.072 38.462 0.00 0.00 41.93 3.21
4500 4618 8.084684 GCATAGTAGATGAACAGATCACATGTA 58.915 37.037 0.00 0.00 41.93 2.29
4501 4619 9.623350 CATAGTAGATGAACAGATCACATGTAG 57.377 37.037 0.00 0.00 41.93 2.74
4502 4620 7.048629 AGTAGATGAACAGATCACATGTAGG 57.951 40.000 0.00 0.00 41.93 3.18
4503 4621 5.287674 AGATGAACAGATCACATGTAGGG 57.712 43.478 0.00 0.00 41.93 3.53
4504 4622 3.266510 TGAACAGATCACATGTAGGGC 57.733 47.619 0.00 0.00 31.50 5.19
4505 4623 2.571202 TGAACAGATCACATGTAGGGCA 59.429 45.455 0.00 0.00 31.50 5.36
4506 4624 2.698855 ACAGATCACATGTAGGGCAC 57.301 50.000 0.00 0.00 0.00 5.01
4507 4625 1.908619 ACAGATCACATGTAGGGCACA 59.091 47.619 0.00 0.00 42.69 4.57
4508 4626 7.327268 TGAACAGATCACATGTAGGGCACAT 62.327 44.000 0.00 0.00 39.90 3.21
4509 4627 3.711190 ACAGATCACATGTAGGGCACATA 59.289 43.478 0.00 0.00 46.47 2.29
4510 4628 4.060900 CAGATCACATGTAGGGCACATAC 58.939 47.826 0.00 0.00 46.47 2.39
4511 4629 3.969976 AGATCACATGTAGGGCACATACT 59.030 43.478 0.00 0.00 46.47 2.12
4512 4630 5.011023 CAGATCACATGTAGGGCACATACTA 59.989 44.000 0.00 0.00 46.47 1.82
4513 4631 4.937201 TCACATGTAGGGCACATACTAG 57.063 45.455 0.00 0.00 46.47 2.57
4514 4632 4.542697 TCACATGTAGGGCACATACTAGA 58.457 43.478 0.00 0.00 46.47 2.43
4515 4633 4.959839 TCACATGTAGGGCACATACTAGAA 59.040 41.667 0.00 0.00 46.47 2.10
4516 4634 5.423931 TCACATGTAGGGCACATACTAGAAA 59.576 40.000 0.00 0.00 46.47 2.52
4517 4635 5.523916 CACATGTAGGGCACATACTAGAAAC 59.476 44.000 0.00 0.00 46.47 2.78
4518 4636 5.188948 ACATGTAGGGCACATACTAGAAACA 59.811 40.000 0.00 0.00 46.47 2.83
4519 4637 5.950544 TGTAGGGCACATACTAGAAACAT 57.049 39.130 0.00 0.00 30.04 2.71
4520 4638 5.670485 TGTAGGGCACATACTAGAAACATG 58.330 41.667 0.00 0.00 30.04 3.21
4521 4639 5.423931 TGTAGGGCACATACTAGAAACATGA 59.576 40.000 0.00 0.00 30.04 3.07
4522 4640 5.435686 AGGGCACATACTAGAAACATGAA 57.564 39.130 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.952296 GAAGTCCCATGCAAGGCTATG 59.048 52.381 1.35 0.00 0.00 2.23
16 17 4.223144 TCATCATATCCTTCGAAGTCCCA 58.777 43.478 23.03 6.45 0.00 4.37
19 20 4.241681 GGCTCATCATATCCTTCGAAGTC 58.758 47.826 23.03 0.00 0.00 3.01
24 25 4.214971 CCTTTTGGCTCATCATATCCTTCG 59.785 45.833 0.00 0.00 0.00 3.79
26 27 5.393068 TCCTTTTGGCTCATCATATCCTT 57.607 39.130 0.00 0.00 40.12 3.36
165 166 3.483587 GGAGTTGAGTGGCCTCCA 58.516 61.111 3.32 0.00 43.51 3.86
173 174 4.040936 TCTCTAGCTTCTGGAGTTGAGT 57.959 45.455 0.00 0.00 39.57 3.41
182 183 3.003275 GTGACCTCGATCTCTAGCTTCTG 59.997 52.174 0.00 0.00 0.00 3.02
301 303 2.642311 TGGGCAAACATCTCCTTCTACA 59.358 45.455 0.00 0.00 0.00 2.74
428 431 4.706035 AGCCAGCATTCAAAATGAACAAA 58.294 34.783 3.91 0.00 39.45 2.83
433 436 2.095110 CACGAGCCAGCATTCAAAATGA 60.095 45.455 3.91 0.00 0.00 2.57
443 446 4.994471 CCAGCACACGAGCCAGCA 62.994 66.667 0.00 0.00 34.23 4.41
475 478 3.627395 AAGGACATATTTCACGCTGGA 57.373 42.857 0.00 0.00 0.00 3.86
498 502 2.435586 CACAGGAGCCAGCCTTCG 60.436 66.667 0.00 0.00 35.66 3.79
532 536 1.606480 CCTACAGTATGATGCCGGCAG 60.606 57.143 35.36 21.15 39.69 4.85
544 549 0.832983 ACAACCGGTGGCCTACAGTA 60.833 55.000 8.52 0.00 0.00 2.74
623 633 2.432972 CCCCGTGCATGCAAAAGC 60.433 61.111 24.58 9.13 0.00 3.51
651 673 4.957684 CGCGGCAGCATCCTCGAT 62.958 66.667 10.08 0.00 45.49 3.59
686 719 2.571231 CCGGATTTGGGTTTGCGG 59.429 61.111 0.00 0.00 40.46 5.69
720 753 4.464069 TTTCTTTTGTTTGGAGGTGTGG 57.536 40.909 0.00 0.00 0.00 4.17
721 754 5.231991 CGATTTTCTTTTGTTTGGAGGTGTG 59.768 40.000 0.00 0.00 0.00 3.82
727 760 5.584253 TGTCCGATTTTCTTTTGTTTGGA 57.416 34.783 0.00 0.00 0.00 3.53
735 768 3.497262 GTCCGTCTTGTCCGATTTTCTTT 59.503 43.478 0.00 0.00 0.00 2.52
737 770 2.036733 TGTCCGTCTTGTCCGATTTTCT 59.963 45.455 0.00 0.00 0.00 2.52
742 775 1.135139 CAGATGTCCGTCTTGTCCGAT 59.865 52.381 0.00 0.00 0.00 4.18
743 776 0.526211 CAGATGTCCGTCTTGTCCGA 59.474 55.000 0.00 0.00 0.00 4.55
751 784 0.036306 ACCCCAAACAGATGTCCGTC 59.964 55.000 0.00 0.00 0.00 4.79
776 809 2.007608 GATCGTTAGGCCAACTCCAAC 58.992 52.381 5.01 0.00 34.77 3.77
793 826 0.470341 GCCTAACCAGGGTCCAGATC 59.530 60.000 0.00 0.00 42.88 2.75
794 827 0.988678 GGCCTAACCAGGGTCCAGAT 60.989 60.000 0.00 0.00 42.88 2.90
795 828 1.615424 GGCCTAACCAGGGTCCAGA 60.615 63.158 0.00 0.00 42.88 3.86
796 829 1.616628 AGGCCTAACCAGGGTCCAG 60.617 63.158 1.29 0.00 42.88 3.86
797 830 1.923395 CAGGCCTAACCAGGGTCCA 60.923 63.158 3.98 0.00 42.88 4.02
798 831 2.680370 CCAGGCCTAACCAGGGTCC 61.680 68.421 3.98 0.00 41.49 4.46
799 832 2.998949 CCAGGCCTAACCAGGGTC 59.001 66.667 3.98 0.00 41.49 4.46
802 835 1.281925 ATGTCCCAGGCCTAACCAGG 61.282 60.000 3.98 0.84 44.86 4.45
803 836 1.507140 TATGTCCCAGGCCTAACCAG 58.493 55.000 3.98 0.00 43.14 4.00
804 837 2.206322 ATATGTCCCAGGCCTAACCA 57.794 50.000 3.98 0.00 43.14 3.67
805 838 4.623171 CGAATATATGTCCCAGGCCTAACC 60.623 50.000 3.98 0.00 39.61 2.85
806 839 4.504858 CGAATATATGTCCCAGGCCTAAC 58.495 47.826 3.98 4.89 0.00 2.34
807 840 3.055385 GCGAATATATGTCCCAGGCCTAA 60.055 47.826 3.98 0.00 0.00 2.69
808 841 2.500098 GCGAATATATGTCCCAGGCCTA 59.500 50.000 3.98 0.00 0.00 3.93
809 842 1.279271 GCGAATATATGTCCCAGGCCT 59.721 52.381 0.00 0.00 0.00 5.19
810 843 1.279271 AGCGAATATATGTCCCAGGCC 59.721 52.381 0.00 0.00 0.00 5.19
811 844 2.234908 AGAGCGAATATATGTCCCAGGC 59.765 50.000 0.00 0.00 0.00 4.85
812 845 4.221703 AGAAGAGCGAATATATGTCCCAGG 59.778 45.833 0.00 0.00 0.00 4.45
813 846 5.398603 AGAAGAGCGAATATATGTCCCAG 57.601 43.478 0.00 0.00 0.00 4.45
814 847 7.285629 CCTATAGAAGAGCGAATATATGTCCCA 59.714 40.741 0.00 0.00 0.00 4.37
830 863 4.261411 ACGGAAAGGTCCCTATAGAAGA 57.739 45.455 0.00 0.00 41.44 2.87
836 869 5.163269 GGTGTAATTACGGAAAGGTCCCTAT 60.163 44.000 10.92 0.00 41.44 2.57
958 999 1.542547 GGTTCAGTGGAGAAGGCGAAA 60.543 52.381 0.00 0.00 0.00 3.46
973 1014 3.006728 AATCGGGGGCTCGGTTCA 61.007 61.111 0.00 0.00 0.00 3.18
989 1030 3.620419 ATGCACATGGCCGTCGGAA 62.620 57.895 17.49 1.85 43.89 4.30
990 1031 4.094646 ATGCACATGGCCGTCGGA 62.095 61.111 17.49 0.00 43.89 4.55
1124 1165 2.966050 AGAGAGATTGGAACACGAAGC 58.034 47.619 0.00 0.00 39.29 3.86
1163 1204 1.014352 GGCCTTCACATAATTCGCGT 58.986 50.000 5.77 0.00 0.00 6.01
1277 1321 1.299976 CCAACTTCCCTCCCTTCGG 59.700 63.158 0.00 0.00 0.00 4.30
1411 1455 4.675976 TTTGAGTTCAACTACCGAAGGA 57.324 40.909 0.00 0.00 43.58 3.36
1455 1502 8.762645 AGGATCACACATTACTCAGAATCTTAA 58.237 33.333 0.00 0.00 0.00 1.85
1463 1510 4.118410 GAGCAGGATCACACATTACTCAG 58.882 47.826 0.00 0.00 0.00 3.35
1503 1550 3.761752 GGCACACAAAAGAAGGGCTTATA 59.238 43.478 0.00 0.00 35.24 0.98
1603 1651 4.093408 CCAGGATAACATTCGACACAACTG 59.907 45.833 0.00 0.00 0.00 3.16
1662 1710 4.079253 TCAACAGGCAAACCTCCTATTTC 58.921 43.478 0.00 0.00 46.34 2.17
1714 1764 8.791327 TCTCATATGTAAGCAAAGTCAAATGA 57.209 30.769 1.90 0.00 0.00 2.57
1763 1813 3.593328 AGGTTGAAAGGATTGATGGAGGA 59.407 43.478 0.00 0.00 0.00 3.71
1939 1989 0.948623 TGGTTCCTGAACGCACATCG 60.949 55.000 4.09 0.00 42.02 3.84
1988 2038 2.348411 ACTGTTTGAACCACAGGAGG 57.652 50.000 5.14 0.00 45.20 4.30
2137 2188 5.512753 TTTGCAGAACAATAACTTGAGCA 57.487 34.783 0.00 0.00 38.31 4.26
2165 2216 4.199432 TCTCAAGCATCTTGACTTCCTC 57.801 45.455 5.25 0.00 0.00 3.71
2252 2304 2.954318 CAGATGGAGCATTAAACTGGGG 59.046 50.000 0.00 0.00 0.00 4.96
2275 2327 5.581126 TGAATGGCAGATTCACATAAACC 57.419 39.130 6.34 0.00 33.55 3.27
2303 2355 4.401022 AGAAAGCCTGTCATCACAAATCA 58.599 39.130 0.00 0.00 29.82 2.57
2304 2356 5.065731 CCTAGAAAGCCTGTCATCACAAATC 59.934 44.000 0.00 0.00 29.82 2.17
2326 2378 2.644798 AGTAGACCAACAAATCTGGCCT 59.355 45.455 3.32 0.00 37.48 5.19
2397 2449 7.686434 ACATACCAGACCAGTTTGTTAGTATT 58.314 34.615 0.00 0.00 0.00 1.89
2459 2511 8.875168 AGGGAGTGATAGTTTTCTGGATTATAG 58.125 37.037 0.00 0.00 0.00 1.31
2460 2512 8.798975 AGGGAGTGATAGTTTTCTGGATTATA 57.201 34.615 0.00 0.00 0.00 0.98
2477 2529 7.739444 ACAATTAATATGGATAGGAGGGAGTGA 59.261 37.037 0.00 0.00 0.00 3.41
2540 2592 3.529319 AGTCCATTTCCAATAAGCCCTCT 59.471 43.478 0.00 0.00 0.00 3.69
2683 2739 7.237920 TGTTTACGTGTTCTCTAAGAAAACC 57.762 36.000 0.00 0.00 38.86 3.27
2766 2829 8.184192 CCCACTAAATACAGCTGTGAATTTTAG 58.816 37.037 29.57 29.01 33.73 1.85
2930 2999 7.123997 TGAAGCAATCAGAAGATAAGACTCTCT 59.876 37.037 0.00 0.00 33.08 3.10
2931 3000 7.264221 TGAAGCAATCAGAAGATAAGACTCTC 58.736 38.462 0.00 0.00 33.08 3.20
2997 3066 4.156739 AGGATGAGAAAAGAAAACGATGCC 59.843 41.667 0.00 0.00 0.00 4.40
3005 3074 6.187727 ACACCTGTAGGATGAGAAAAGAAA 57.812 37.500 4.64 0.00 38.94 2.52
3044 3113 3.633525 TGCTGCAAGAAATCTGTTGAAGT 59.366 39.130 0.00 0.00 34.52 3.01
3125 3194 1.638133 CGCAGATCTGTCAGTCTTGG 58.362 55.000 23.38 0.00 0.00 3.61
3130 3199 1.079543 GCACCGCAGATCTGTCAGT 60.080 57.895 23.38 15.07 0.00 3.41
3233 3302 6.648725 AACAACGTCTTGATATTACTCAGC 57.351 37.500 0.00 0.00 0.00 4.26
3234 3303 8.162880 GTGAAACAACGTCTTGATATTACTCAG 58.837 37.037 0.00 0.00 36.32 3.35
3241 3310 3.743911 TGCGTGAAACAACGTCTTGATAT 59.256 39.130 0.00 0.00 45.32 1.63
3259 3328 2.349438 CGATGTAAAGTGCTGTTTGCGT 60.349 45.455 0.00 0.00 46.63 5.24
3270 3339 3.610040 TCTGCACCATCGATGTAAAGT 57.390 42.857 23.27 11.49 0.00 2.66
3274 3343 2.212652 GCAATCTGCACCATCGATGTA 58.787 47.619 23.27 6.68 44.26 2.29
3321 3390 2.755650 TGCCAAAGAGAGAAAGTCGAC 58.244 47.619 7.70 7.70 0.00 4.20
3333 3402 5.412640 CATGCTCAATACAATTGCCAAAGA 58.587 37.500 5.05 0.00 0.00 2.52
3355 3424 7.787623 TCAGATAGATATTTCAGCATCTCCA 57.212 36.000 0.00 0.00 33.58 3.86
3383 3452 0.824109 TGTCCCGTATCTTGCCTGAG 59.176 55.000 0.00 0.00 0.00 3.35
3414 3483 1.543944 CCAGTTTCACCCCAATGGCC 61.544 60.000 0.00 0.00 37.83 5.36
3463 3532 3.371063 CCACAAGCTGCTGGCCAG 61.371 66.667 29.34 29.34 44.67 4.85
3523 3592 2.092429 TCAGTTTCCCTGTGCAAGTCTT 60.092 45.455 0.00 0.00 42.19 3.01
3525 3594 1.876156 CTCAGTTTCCCTGTGCAAGTC 59.124 52.381 0.00 0.00 42.19 3.01
3526 3595 1.477558 CCTCAGTTTCCCTGTGCAAGT 60.478 52.381 0.00 0.00 42.19 3.16
3527 3596 1.242076 CCTCAGTTTCCCTGTGCAAG 58.758 55.000 0.00 0.00 42.19 4.01
3528 3597 0.178992 CCCTCAGTTTCCCTGTGCAA 60.179 55.000 0.00 0.00 42.19 4.08
3530 3599 0.890996 CACCCTCAGTTTCCCTGTGC 60.891 60.000 0.00 0.00 42.19 4.57
3531 3600 0.250901 CCACCCTCAGTTTCCCTGTG 60.251 60.000 0.00 0.00 42.19 3.66
3532 3601 0.697854 ACCACCCTCAGTTTCCCTGT 60.698 55.000 0.00 0.00 42.19 4.00
3533 3602 1.279271 CTACCACCCTCAGTTTCCCTG 59.721 57.143 0.00 0.00 42.97 4.45
3534 3603 1.151413 TCTACCACCCTCAGTTTCCCT 59.849 52.381 0.00 0.00 0.00 4.20
3535 3604 1.652947 TCTACCACCCTCAGTTTCCC 58.347 55.000 0.00 0.00 0.00 3.97
3536 3605 3.181478 CGTATCTACCACCCTCAGTTTCC 60.181 52.174 0.00 0.00 0.00 3.13
3537 3606 3.698040 TCGTATCTACCACCCTCAGTTTC 59.302 47.826 0.00 0.00 0.00 2.78
3538 3607 3.705051 TCGTATCTACCACCCTCAGTTT 58.295 45.455 0.00 0.00 0.00 2.66
3539 3608 3.377253 TCGTATCTACCACCCTCAGTT 57.623 47.619 0.00 0.00 0.00 3.16
3540 3609 3.596940 ATCGTATCTACCACCCTCAGT 57.403 47.619 0.00 0.00 0.00 3.41
3541 3610 3.553096 GCAATCGTATCTACCACCCTCAG 60.553 52.174 0.00 0.00 0.00 3.35
3542 3611 2.364324 GCAATCGTATCTACCACCCTCA 59.636 50.000 0.00 0.00 0.00 3.86
3543 3612 2.364324 TGCAATCGTATCTACCACCCTC 59.636 50.000 0.00 0.00 0.00 4.30
3544 3613 2.394632 TGCAATCGTATCTACCACCCT 58.605 47.619 0.00 0.00 0.00 4.34
3545 3614 2.902705 TGCAATCGTATCTACCACCC 57.097 50.000 0.00 0.00 0.00 4.61
3546 3615 6.534079 GGTATTATGCAATCGTATCTACCACC 59.466 42.308 0.00 0.00 30.43 4.61
3547 3616 6.252869 CGGTATTATGCAATCGTATCTACCAC 59.747 42.308 0.00 0.00 30.43 4.16
3548 3617 6.327154 CGGTATTATGCAATCGTATCTACCA 58.673 40.000 0.00 0.00 30.43 3.25
3549 3618 5.747197 CCGGTATTATGCAATCGTATCTACC 59.253 44.000 0.00 0.00 0.00 3.18
3550 3619 6.252869 CACCGGTATTATGCAATCGTATCTAC 59.747 42.308 6.87 0.00 0.00 2.59
3551 3620 6.327154 CACCGGTATTATGCAATCGTATCTA 58.673 40.000 6.87 0.00 0.00 1.98
3552 3621 5.168569 CACCGGTATTATGCAATCGTATCT 58.831 41.667 6.87 0.00 0.00 1.98
3553 3622 4.328983 CCACCGGTATTATGCAATCGTATC 59.671 45.833 6.87 0.00 0.00 2.24
3554 3623 4.250464 CCACCGGTATTATGCAATCGTAT 58.750 43.478 6.87 0.00 0.00 3.06
3555 3624 3.069872 ACCACCGGTATTATGCAATCGTA 59.930 43.478 6.87 0.00 32.11 3.43
3556 3625 2.158871 ACCACCGGTATTATGCAATCGT 60.159 45.455 6.87 0.00 32.11 3.73
3557 3626 2.489971 ACCACCGGTATTATGCAATCG 58.510 47.619 6.87 0.00 32.11 3.34
3558 3627 3.630312 ACAACCACCGGTATTATGCAATC 59.370 43.478 6.87 0.00 33.12 2.67
3559 3628 3.380004 CACAACCACCGGTATTATGCAAT 59.620 43.478 6.87 0.00 33.12 3.56
3560 3629 2.750166 CACAACCACCGGTATTATGCAA 59.250 45.455 6.87 0.00 33.12 4.08
3561 3630 2.027100 TCACAACCACCGGTATTATGCA 60.027 45.455 6.87 0.00 33.12 3.96
3562 3631 2.353579 GTCACAACCACCGGTATTATGC 59.646 50.000 6.87 0.00 33.12 3.14
3563 3632 3.869065 AGTCACAACCACCGGTATTATG 58.131 45.455 6.87 4.54 33.12 1.90
3564 3633 5.881923 ATAGTCACAACCACCGGTATTAT 57.118 39.130 6.87 0.00 33.12 1.28
3565 3634 5.680594 AATAGTCACAACCACCGGTATTA 57.319 39.130 6.87 0.00 33.12 0.98
3566 3635 4.563140 AATAGTCACAACCACCGGTATT 57.437 40.909 6.87 1.13 33.12 1.89
3567 3636 4.563140 AAATAGTCACAACCACCGGTAT 57.437 40.909 6.87 0.00 33.12 2.73
3568 3637 4.354893 AAAATAGTCACAACCACCGGTA 57.645 40.909 6.87 0.00 33.12 4.02
3569 3638 2.943036 AAATAGTCACAACCACCGGT 57.057 45.000 0.00 0.00 37.65 5.28
3592 3661 9.923143 TGTCTTCATAGATCGAAAGTTTTCTAA 57.077 29.630 0.00 0.00 32.24 2.10
3593 3662 9.574458 CTGTCTTCATAGATCGAAAGTTTTCTA 57.426 33.333 0.00 0.00 32.24 2.10
3605 3674 6.586463 TGTTCGTTGTTCTGTCTTCATAGATC 59.414 38.462 0.00 0.00 31.86 2.75
3606 3675 6.366332 GTGTTCGTTGTTCTGTCTTCATAGAT 59.634 38.462 0.00 0.00 31.86 1.98
3609 3682 4.748102 GGTGTTCGTTGTTCTGTCTTCATA 59.252 41.667 0.00 0.00 0.00 2.15
3612 3685 2.933906 TGGTGTTCGTTGTTCTGTCTTC 59.066 45.455 0.00 0.00 0.00 2.87
3614 3687 2.167693 TCTGGTGTTCGTTGTTCTGTCT 59.832 45.455 0.00 0.00 0.00 3.41
3620 3693 9.974980 ATTTTATTATTTCTGGTGTTCGTTGTT 57.025 25.926 0.00 0.00 0.00 2.83
3655 3731 2.688958 GTCGCTAGGTGGTCTACAGATT 59.311 50.000 0.00 0.00 0.00 2.40
3805 3891 1.002544 GATGTGCTGGTCCTATAGGGC 59.997 57.143 18.97 17.30 39.63 5.19
3806 3892 2.301296 CTGATGTGCTGGTCCTATAGGG 59.699 54.545 18.97 3.70 35.41 3.53
3807 3893 3.234353 TCTGATGTGCTGGTCCTATAGG 58.766 50.000 13.07 13.07 0.00 2.57
3808 3894 4.100035 TGTTCTGATGTGCTGGTCCTATAG 59.900 45.833 0.00 0.00 0.00 1.31
3809 3895 4.030216 TGTTCTGATGTGCTGGTCCTATA 58.970 43.478 0.00 0.00 0.00 1.31
3810 3896 2.840038 TGTTCTGATGTGCTGGTCCTAT 59.160 45.455 0.00 0.00 0.00 2.57
3811 3897 2.256306 TGTTCTGATGTGCTGGTCCTA 58.744 47.619 0.00 0.00 0.00 2.94
3812 3898 1.059098 TGTTCTGATGTGCTGGTCCT 58.941 50.000 0.00 0.00 0.00 3.85
3813 3899 1.537202 GTTGTTCTGATGTGCTGGTCC 59.463 52.381 0.00 0.00 0.00 4.46
3824 3910 1.573829 GGCGGCGATTGTTGTTCTGA 61.574 55.000 12.98 0.00 0.00 3.27
3844 3930 2.543012 CCAATCTACGCTGCTCTTCATG 59.457 50.000 0.00 0.00 0.00 3.07
3853 3939 2.760374 GGATCCTTCCAATCTACGCTG 58.240 52.381 3.84 0.00 42.12 5.18
3876 3962 5.989168 TCATCTACGTTCATGTGTTTTCAGT 59.011 36.000 0.00 0.00 0.00 3.41
3933 4021 1.153549 GTGTGTCTCCGGCAGATCC 60.154 63.158 0.00 0.00 32.08 3.36
3986 4084 7.773690 GGAATAAGGTTCTCCATGTTTAGCTTA 59.226 37.037 0.00 0.00 34.51 3.09
3987 4085 6.603599 GGAATAAGGTTCTCCATGTTTAGCTT 59.396 38.462 0.00 0.00 35.89 3.74
3997 4095 6.126478 CCCTAAAGATGGAATAAGGTTCTCCA 60.126 42.308 0.00 0.00 43.26 3.86
4025 4129 1.428219 GAAGACGAGATGACGGCGA 59.572 57.895 16.62 0.00 46.71 5.54
4083 4201 1.302511 GCTCTTGCCAACGGAAGGA 60.303 57.895 0.00 0.00 0.00 3.36
4099 4217 4.654412 GCGCGATGGATCTCGGCT 62.654 66.667 12.10 0.00 39.05 5.52
4162 4280 3.749064 GTCTGCCTCTCGCCGTCA 61.749 66.667 0.00 0.00 36.24 4.35
4179 4297 5.749588 TCACAACCACCGTATTATACAATCG 59.250 40.000 3.16 0.00 0.00 3.34
4180 4298 6.759827 AGTCACAACCACCGTATTATACAATC 59.240 38.462 3.16 0.00 0.00 2.67
4181 4299 6.646267 AGTCACAACCACCGTATTATACAAT 58.354 36.000 3.16 0.00 0.00 2.71
4182 4300 6.040209 AGTCACAACCACCGTATTATACAA 57.960 37.500 3.16 0.00 0.00 2.41
4183 4301 5.185442 TGAGTCACAACCACCGTATTATACA 59.815 40.000 3.16 0.00 0.00 2.29
4184 4302 5.653507 TGAGTCACAACCACCGTATTATAC 58.346 41.667 0.00 0.00 0.00 1.47
4185 4303 5.653330 TCTGAGTCACAACCACCGTATTATA 59.347 40.000 0.00 0.00 0.00 0.98
4186 4304 4.464951 TCTGAGTCACAACCACCGTATTAT 59.535 41.667 0.00 0.00 0.00 1.28
4187 4305 3.827876 TCTGAGTCACAACCACCGTATTA 59.172 43.478 0.00 0.00 0.00 0.98
4188 4306 2.631062 TCTGAGTCACAACCACCGTATT 59.369 45.455 0.00 0.00 0.00 1.89
4189 4307 2.244695 TCTGAGTCACAACCACCGTAT 58.755 47.619 0.00 0.00 0.00 3.06
4190 4308 1.694844 TCTGAGTCACAACCACCGTA 58.305 50.000 0.00 0.00 0.00 4.02
4191 4309 0.828022 TTCTGAGTCACAACCACCGT 59.172 50.000 0.00 0.00 0.00 4.83
4192 4310 1.867233 CTTTCTGAGTCACAACCACCG 59.133 52.381 0.00 0.00 0.00 4.94
4193 4311 1.604278 GCTTTCTGAGTCACAACCACC 59.396 52.381 0.00 0.00 0.00 4.61
4194 4312 2.288666 TGCTTTCTGAGTCACAACCAC 58.711 47.619 0.00 0.00 0.00 4.16
4195 4313 2.170397 TCTGCTTTCTGAGTCACAACCA 59.830 45.455 0.00 0.00 0.00 3.67
4196 4314 2.838736 TCTGCTTTCTGAGTCACAACC 58.161 47.619 0.00 0.00 0.00 3.77
4197 4315 4.882671 TTTCTGCTTTCTGAGTCACAAC 57.117 40.909 0.00 0.00 0.00 3.32
4198 4316 4.212004 CGATTTCTGCTTTCTGAGTCACAA 59.788 41.667 0.00 0.00 0.00 3.33
4199 4317 3.742882 CGATTTCTGCTTTCTGAGTCACA 59.257 43.478 0.00 0.00 0.00 3.58
4200 4318 3.990469 TCGATTTCTGCTTTCTGAGTCAC 59.010 43.478 0.00 0.00 0.00 3.67
4201 4319 4.257267 TCGATTTCTGCTTTCTGAGTCA 57.743 40.909 0.00 0.00 0.00 3.41
4202 4320 4.493872 GCATCGATTTCTGCTTTCTGAGTC 60.494 45.833 0.00 0.00 35.49 3.36
4203 4321 3.373439 GCATCGATTTCTGCTTTCTGAGT 59.627 43.478 0.00 0.00 35.49 3.41
4204 4322 3.373130 TGCATCGATTTCTGCTTTCTGAG 59.627 43.478 9.89 0.00 39.16 3.35
4205 4323 3.337358 TGCATCGATTTCTGCTTTCTGA 58.663 40.909 9.89 0.00 39.16 3.27
4206 4324 3.752412 TGCATCGATTTCTGCTTTCTG 57.248 42.857 9.89 0.00 39.16 3.02
4207 4325 4.669318 CAATGCATCGATTTCTGCTTTCT 58.331 39.130 9.89 0.00 39.16 2.52
4208 4326 3.242248 GCAATGCATCGATTTCTGCTTTC 59.758 43.478 9.89 2.24 39.16 2.62
4209 4327 3.184541 GCAATGCATCGATTTCTGCTTT 58.815 40.909 9.89 7.08 39.16 3.51
4210 4328 2.164827 TGCAATGCATCGATTTCTGCTT 59.835 40.909 15.98 1.24 39.16 3.91
4211 4329 1.746787 TGCAATGCATCGATTTCTGCT 59.253 42.857 15.98 0.00 39.16 4.24
4212 4330 2.197792 TGCAATGCATCGATTTCTGC 57.802 45.000 2.72 9.76 38.87 4.26
4213 4331 4.607955 AGATTGCAATGCATCGATTTCTG 58.392 39.130 18.59 0.00 38.76 3.02
4214 4332 4.337274 TGAGATTGCAATGCATCGATTTCT 59.663 37.500 18.59 3.93 38.76 2.52
4215 4333 4.603985 TGAGATTGCAATGCATCGATTTC 58.396 39.130 18.59 5.39 38.76 2.17
4216 4334 4.642445 TGAGATTGCAATGCATCGATTT 57.358 36.364 18.59 0.00 38.76 2.17
4217 4335 4.642445 TTGAGATTGCAATGCATCGATT 57.358 36.364 18.59 0.00 38.76 3.34
4218 4336 4.097437 ACTTTGAGATTGCAATGCATCGAT 59.903 37.500 18.59 0.00 38.76 3.59
4219 4337 3.441222 ACTTTGAGATTGCAATGCATCGA 59.559 39.130 18.59 8.99 38.76 3.59
4220 4338 3.766151 ACTTTGAGATTGCAATGCATCG 58.234 40.909 18.59 10.54 38.76 3.84
4221 4339 3.789756 CGACTTTGAGATTGCAATGCATC 59.210 43.478 18.59 12.25 38.76 3.91
4222 4340 3.192001 ACGACTTTGAGATTGCAATGCAT 59.808 39.130 18.59 2.02 38.76 3.96
4223 4341 2.553602 ACGACTTTGAGATTGCAATGCA 59.446 40.909 18.59 11.94 36.47 3.96
4224 4342 3.207474 ACGACTTTGAGATTGCAATGC 57.793 42.857 18.59 9.26 0.00 3.56
4225 4343 4.786507 TCAACGACTTTGAGATTGCAATG 58.213 39.130 18.59 3.47 39.45 2.82
4226 4344 5.009010 ACTTCAACGACTTTGAGATTGCAAT 59.991 36.000 12.83 12.83 45.22 3.56
4227 4345 4.335315 ACTTCAACGACTTTGAGATTGCAA 59.665 37.500 0.00 0.00 45.22 4.08
4228 4346 3.876914 ACTTCAACGACTTTGAGATTGCA 59.123 39.130 0.00 0.00 45.22 4.08
4229 4347 4.458708 GACTTCAACGACTTTGAGATTGC 58.541 43.478 0.00 0.00 45.22 3.56
4230 4348 4.511454 TGGACTTCAACGACTTTGAGATTG 59.489 41.667 0.00 0.00 45.22 2.67
4231 4349 4.511826 GTGGACTTCAACGACTTTGAGATT 59.488 41.667 0.00 0.00 45.22 2.40
4232 4350 4.058817 GTGGACTTCAACGACTTTGAGAT 58.941 43.478 0.00 0.00 45.22 2.75
4233 4351 3.132289 AGTGGACTTCAACGACTTTGAGA 59.868 43.478 0.00 0.00 45.22 3.27
4234 4352 3.246226 CAGTGGACTTCAACGACTTTGAG 59.754 47.826 0.00 0.00 45.22 3.02
4235 4353 3.194861 CAGTGGACTTCAACGACTTTGA 58.805 45.455 0.00 0.00 42.83 2.69
4236 4354 2.936498 ACAGTGGACTTCAACGACTTTG 59.064 45.455 0.00 0.00 36.42 2.77
4237 4355 3.261981 ACAGTGGACTTCAACGACTTT 57.738 42.857 0.00 0.00 0.00 2.66
4238 4356 2.981859 ACAGTGGACTTCAACGACTT 57.018 45.000 0.00 0.00 0.00 3.01
4239 4357 2.035576 GGTACAGTGGACTTCAACGACT 59.964 50.000 5.24 0.00 0.00 4.18
4240 4358 2.401351 GGTACAGTGGACTTCAACGAC 58.599 52.381 5.24 0.00 0.00 4.34
4241 4359 1.342174 GGGTACAGTGGACTTCAACGA 59.658 52.381 5.24 0.00 0.00 3.85
4242 4360 1.607251 GGGGTACAGTGGACTTCAACG 60.607 57.143 5.24 0.00 0.00 4.10
4243 4361 1.271217 GGGGGTACAGTGGACTTCAAC 60.271 57.143 5.24 0.00 0.00 3.18
4244 4362 1.061546 GGGGGTACAGTGGACTTCAA 58.938 55.000 5.24 0.00 0.00 2.69
4245 4363 0.104882 TGGGGGTACAGTGGACTTCA 60.105 55.000 5.24 0.00 0.00 3.02
4246 4364 1.065418 CATGGGGGTACAGTGGACTTC 60.065 57.143 5.24 0.00 0.00 3.01
4247 4365 0.991920 CATGGGGGTACAGTGGACTT 59.008 55.000 5.24 0.00 0.00 3.01
4248 4366 0.178873 ACATGGGGGTACAGTGGACT 60.179 55.000 5.24 0.00 0.00 3.85
4249 4367 0.696501 AACATGGGGGTACAGTGGAC 59.303 55.000 0.00 0.00 0.00 4.02
4250 4368 1.451449 AAACATGGGGGTACAGTGGA 58.549 50.000 0.00 0.00 0.00 4.02
4251 4369 1.892474 CAAAACATGGGGGTACAGTGG 59.108 52.381 0.00 0.00 0.00 4.00
4252 4370 2.593026 ACAAAACATGGGGGTACAGTG 58.407 47.619 0.00 0.00 0.00 3.66
4253 4371 3.322191 AACAAAACATGGGGGTACAGT 57.678 42.857 0.00 0.00 0.00 3.55
4254 4372 4.681074 AAAACAAAACATGGGGGTACAG 57.319 40.909 0.00 0.00 0.00 2.74
4255 4373 4.441634 CGAAAAACAAAACATGGGGGTACA 60.442 41.667 0.00 0.00 0.00 2.90
4256 4374 4.052608 CGAAAAACAAAACATGGGGGTAC 58.947 43.478 0.00 0.00 0.00 3.34
4257 4375 3.705072 ACGAAAAACAAAACATGGGGGTA 59.295 39.130 0.00 0.00 0.00 3.69
4258 4376 2.502130 ACGAAAAACAAAACATGGGGGT 59.498 40.909 0.00 0.00 0.00 4.95
4259 4377 3.127589 GACGAAAAACAAAACATGGGGG 58.872 45.455 0.00 0.00 0.00 5.40
4260 4378 4.053469 AGACGAAAAACAAAACATGGGG 57.947 40.909 0.00 0.00 0.00 4.96
4261 4379 6.415798 AAAAGACGAAAAACAAAACATGGG 57.584 33.333 0.00 0.00 0.00 4.00
4296 4414 2.895242 AAGAAATTGGGAGCTCTGCT 57.105 45.000 14.64 0.00 43.88 4.24
4297 4415 2.821969 TGAAAGAAATTGGGAGCTCTGC 59.178 45.455 14.64 0.00 0.00 4.26
4298 4416 5.184479 TGAATGAAAGAAATTGGGAGCTCTG 59.816 40.000 14.64 0.00 0.00 3.35
4299 4417 5.327732 TGAATGAAAGAAATTGGGAGCTCT 58.672 37.500 14.64 0.00 0.00 4.09
4300 4418 5.649782 TGAATGAAAGAAATTGGGAGCTC 57.350 39.130 4.71 4.71 0.00 4.09
4301 4419 6.423776 TTTGAATGAAAGAAATTGGGAGCT 57.576 33.333 0.00 0.00 0.00 4.09
4302 4420 7.388500 TCATTTTGAATGAAAGAAATTGGGAGC 59.612 33.333 1.10 0.00 0.00 4.70
4303 4421 8.836268 TCATTTTGAATGAAAGAAATTGGGAG 57.164 30.769 1.10 0.00 0.00 4.30
4304 4422 9.624373 TTTCATTTTGAATGAAAGAAATTGGGA 57.376 25.926 19.41 0.75 41.46 4.37
4305 4423 9.667989 GTTTCATTTTGAATGAAAGAAATTGGG 57.332 29.630 22.27 0.00 45.30 4.12
4317 4435 9.850628 ACTGTATCATCAGTTTCATTTTGAATG 57.149 29.630 0.00 0.00 44.92 2.67
4328 4446 9.140052 CGTCAACGACAACTGTATCATCAGTTT 62.140 40.741 8.98 2.82 46.73 2.66
4330 4448 6.349540 CGTCAACGACAACTGTATCATCAGT 61.350 44.000 0.00 0.00 44.99 3.41
4331 4449 4.030641 CGTCAACGACAACTGTATCATCAG 59.969 45.833 0.00 0.00 43.02 2.90
4332 4450 3.917985 CGTCAACGACAACTGTATCATCA 59.082 43.478 0.00 0.00 43.02 3.07
4333 4451 3.303495 CCGTCAACGACAACTGTATCATC 59.697 47.826 3.71 0.00 43.02 2.92
4334 4452 3.250744 CCGTCAACGACAACTGTATCAT 58.749 45.455 3.71 0.00 43.02 2.45
4335 4453 2.668250 CCGTCAACGACAACTGTATCA 58.332 47.619 3.71 0.00 43.02 2.15
4336 4454 1.389106 GCCGTCAACGACAACTGTATC 59.611 52.381 3.71 0.00 43.02 2.24
4337 4455 1.425412 GCCGTCAACGACAACTGTAT 58.575 50.000 3.71 0.00 43.02 2.29
4338 4456 0.598158 GGCCGTCAACGACAACTGTA 60.598 55.000 3.71 0.00 43.02 2.74
4339 4457 1.885850 GGCCGTCAACGACAACTGT 60.886 57.895 3.71 0.00 43.02 3.55
4340 4458 2.604174 GGGCCGTCAACGACAACTG 61.604 63.158 3.71 0.00 43.02 3.16
4341 4459 2.280592 GGGCCGTCAACGACAACT 60.281 61.111 3.71 0.00 43.02 3.16
4342 4460 3.351416 GGGGCCGTCAACGACAAC 61.351 66.667 3.71 0.00 43.02 3.32
4343 4461 3.109592 AAGGGGCCGTCAACGACAA 62.110 57.895 3.71 0.00 43.02 3.18
4344 4462 3.552384 AAGGGGCCGTCAACGACA 61.552 61.111 3.71 0.00 43.02 4.35
4345 4463 2.999739 TTCAAGGGGCCGTCAACGAC 63.000 60.000 3.71 0.00 43.02 4.34
4346 4464 2.326773 TTTCAAGGGGCCGTCAACGA 62.327 55.000 3.71 0.00 43.02 3.85
4347 4465 1.448922 TTTTCAAGGGGCCGTCAACG 61.449 55.000 0.00 0.00 39.44 4.10
4348 4466 0.031585 GTTTTCAAGGGGCCGTCAAC 59.968 55.000 0.00 0.00 0.00 3.18
4349 4467 1.448922 CGTTTTCAAGGGGCCGTCAA 61.449 55.000 0.00 0.00 0.00 3.18
4350 4468 1.894756 CGTTTTCAAGGGGCCGTCA 60.895 57.895 0.00 0.00 0.00 4.35
4351 4469 1.167781 TTCGTTTTCAAGGGGCCGTC 61.168 55.000 0.00 0.00 0.00 4.79
4352 4470 0.752376 TTTCGTTTTCAAGGGGCCGT 60.752 50.000 0.00 0.00 0.00 5.68
4353 4471 0.039527 CTTTCGTTTTCAAGGGGCCG 60.040 55.000 0.00 0.00 0.00 6.13
4354 4472 0.319555 GCTTTCGTTTTCAAGGGGCC 60.320 55.000 0.00 0.00 0.00 5.80
4355 4473 0.673985 AGCTTTCGTTTTCAAGGGGC 59.326 50.000 0.00 0.00 0.00 5.80
4356 4474 3.123050 CAAAGCTTTCGTTTTCAAGGGG 58.877 45.455 9.23 0.00 0.00 4.79
4357 4475 3.780902 ACAAAGCTTTCGTTTTCAAGGG 58.219 40.909 9.23 0.00 0.00 3.95
4358 4476 4.032786 CCAACAAAGCTTTCGTTTTCAAGG 59.967 41.667 9.23 10.09 0.00 3.61
4359 4477 4.862018 TCCAACAAAGCTTTCGTTTTCAAG 59.138 37.500 9.23 5.54 0.00 3.02
4360 4478 4.810790 TCCAACAAAGCTTTCGTTTTCAA 58.189 34.783 9.23 1.15 0.00 2.69
4361 4479 4.442375 TCCAACAAAGCTTTCGTTTTCA 57.558 36.364 9.23 1.79 0.00 2.69
4362 4480 5.119434 TGTTTCCAACAAAGCTTTCGTTTTC 59.881 36.000 9.23 6.51 38.72 2.29
4363 4481 4.991687 TGTTTCCAACAAAGCTTTCGTTTT 59.008 33.333 9.23 0.00 38.72 2.43
4364 4482 4.561105 TGTTTCCAACAAAGCTTTCGTTT 58.439 34.783 9.23 0.00 38.72 3.60
4365 4483 4.181309 TGTTTCCAACAAAGCTTTCGTT 57.819 36.364 9.23 13.87 38.72 3.85
4366 4484 3.859411 TGTTTCCAACAAAGCTTTCGT 57.141 38.095 9.23 8.49 38.72 3.85
4367 4485 4.358851 TCATGTTTCCAACAAAGCTTTCG 58.641 39.130 9.23 7.84 45.86 3.46
4368 4486 4.209911 GCTCATGTTTCCAACAAAGCTTTC 59.790 41.667 9.23 0.00 45.86 2.62
4369 4487 4.122046 GCTCATGTTTCCAACAAAGCTTT 58.878 39.130 5.69 5.69 45.86 3.51
4370 4488 3.132646 TGCTCATGTTTCCAACAAAGCTT 59.867 39.130 19.70 0.00 46.21 3.74
4371 4489 2.694628 TGCTCATGTTTCCAACAAAGCT 59.305 40.909 19.70 0.00 46.21 3.74
4372 4490 3.096489 TGCTCATGTTTCCAACAAAGC 57.904 42.857 15.37 15.37 45.86 3.51
4373 4491 6.607735 AATTTGCTCATGTTTCCAACAAAG 57.392 33.333 0.00 0.00 45.86 2.77
4374 4492 7.271511 AGTAATTTGCTCATGTTTCCAACAAA 58.728 30.769 0.00 0.00 45.86 2.83
4375 4493 6.815089 AGTAATTTGCTCATGTTTCCAACAA 58.185 32.000 0.00 0.00 45.86 2.83
4376 4494 6.403866 AGTAATTTGCTCATGTTTCCAACA 57.596 33.333 0.00 0.00 46.94 3.33
4377 4495 8.243426 TCATAGTAATTTGCTCATGTTTCCAAC 58.757 33.333 0.00 0.00 0.00 3.77
4378 4496 8.347004 TCATAGTAATTTGCTCATGTTTCCAA 57.653 30.769 0.00 0.00 0.00 3.53
4379 4497 7.828717 TCTCATAGTAATTTGCTCATGTTTCCA 59.171 33.333 0.00 0.00 0.00 3.53
4380 4498 8.213518 TCTCATAGTAATTTGCTCATGTTTCC 57.786 34.615 0.00 0.00 0.00 3.13
4389 4507 9.778741 TCGGATTAAATCTCATAGTAATTTGCT 57.221 29.630 0.00 0.00 0.00 3.91
4445 4563 8.870879 GTTTGCACGATTAGTTTAATCTCTACT 58.129 33.333 0.00 0.00 41.80 2.57
4446 4564 8.870879 AGTTTGCACGATTAGTTTAATCTCTAC 58.129 33.333 0.00 0.00 41.80 2.59
4447 4565 8.997621 AGTTTGCACGATTAGTTTAATCTCTA 57.002 30.769 0.00 0.00 41.80 2.43
4448 4566 7.907214 AGTTTGCACGATTAGTTTAATCTCT 57.093 32.000 0.00 0.00 41.80 3.10
4449 4567 7.846592 GCTAGTTTGCACGATTAGTTTAATCTC 59.153 37.037 0.00 0.00 41.80 2.75
4450 4568 7.333423 TGCTAGTTTGCACGATTAGTTTAATCT 59.667 33.333 0.00 0.00 39.09 2.40
4451 4569 7.461107 TGCTAGTTTGCACGATTAGTTTAATC 58.539 34.615 0.00 0.00 38.53 1.75
4452 4570 7.372451 TGCTAGTTTGCACGATTAGTTTAAT 57.628 32.000 0.00 0.00 38.12 1.40
4453 4571 6.788684 TGCTAGTTTGCACGATTAGTTTAA 57.211 33.333 0.00 0.00 38.12 1.52
4454 4572 6.978343 ATGCTAGTTTGCACGATTAGTTTA 57.022 33.333 0.00 0.00 46.33 2.01
4455 4573 5.880054 ATGCTAGTTTGCACGATTAGTTT 57.120 34.783 0.00 0.00 46.33 2.66
4456 4574 6.106673 ACTATGCTAGTTTGCACGATTAGTT 58.893 36.000 0.00 0.00 46.33 2.24
4457 4575 5.661458 ACTATGCTAGTTTGCACGATTAGT 58.339 37.500 0.00 0.00 46.33 2.24
4458 4576 7.139392 TCTACTATGCTAGTTTGCACGATTAG 58.861 38.462 0.00 0.00 46.33 1.73
4459 4577 7.034685 TCTACTATGCTAGTTTGCACGATTA 57.965 36.000 0.00 0.00 46.33 1.75
4460 4578 5.902681 TCTACTATGCTAGTTTGCACGATT 58.097 37.500 0.00 0.00 46.33 3.34
4461 4579 5.515797 TCTACTATGCTAGTTTGCACGAT 57.484 39.130 0.00 0.00 46.33 3.73
4462 4580 4.976224 TCTACTATGCTAGTTTGCACGA 57.024 40.909 0.00 0.00 46.33 4.35
4463 4581 5.281727 TCATCTACTATGCTAGTTTGCACG 58.718 41.667 0.00 0.00 46.33 5.34
4464 4582 6.535150 TGTTCATCTACTATGCTAGTTTGCAC 59.465 38.462 0.00 1.44 46.33 4.57
4466 4584 6.980978 TCTGTTCATCTACTATGCTAGTTTGC 59.019 38.462 1.93 0.00 40.14 3.68
4467 4585 9.190858 GATCTGTTCATCTACTATGCTAGTTTG 57.809 37.037 1.93 0.36 40.14 2.93
4468 4586 8.918116 TGATCTGTTCATCTACTATGCTAGTTT 58.082 33.333 0.00 0.00 40.14 2.66
4469 4587 8.356657 GTGATCTGTTCATCTACTATGCTAGTT 58.643 37.037 0.00 0.00 37.15 2.24
4470 4588 7.503902 TGTGATCTGTTCATCTACTATGCTAGT 59.496 37.037 0.00 2.19 38.55 2.57
4471 4589 7.880105 TGTGATCTGTTCATCTACTATGCTAG 58.120 38.462 0.00 0.00 36.54 3.42
4472 4590 7.823745 TGTGATCTGTTCATCTACTATGCTA 57.176 36.000 0.00 0.00 36.54 3.49
4473 4591 6.721704 TGTGATCTGTTCATCTACTATGCT 57.278 37.500 0.00 0.00 36.54 3.79
4474 4592 6.927936 ACATGTGATCTGTTCATCTACTATGC 59.072 38.462 0.00 0.00 36.54 3.14
4475 4593 9.623350 CTACATGTGATCTGTTCATCTACTATG 57.377 37.037 9.11 0.00 36.54 2.23
4476 4594 8.801299 CCTACATGTGATCTGTTCATCTACTAT 58.199 37.037 9.11 0.00 36.54 2.12
4477 4595 7.231519 CCCTACATGTGATCTGTTCATCTACTA 59.768 40.741 9.11 0.00 36.54 1.82
4478 4596 6.041409 CCCTACATGTGATCTGTTCATCTACT 59.959 42.308 9.11 0.00 36.54 2.57
4479 4597 6.219473 CCCTACATGTGATCTGTTCATCTAC 58.781 44.000 9.11 0.00 36.54 2.59
4480 4598 5.221521 GCCCTACATGTGATCTGTTCATCTA 60.222 44.000 9.11 0.00 36.54 1.98
4481 4599 4.444022 GCCCTACATGTGATCTGTTCATCT 60.444 45.833 9.11 0.00 36.54 2.90
4482 4600 3.812053 GCCCTACATGTGATCTGTTCATC 59.188 47.826 9.11 0.00 36.54 2.92
4483 4601 3.200605 TGCCCTACATGTGATCTGTTCAT 59.799 43.478 9.11 0.00 36.54 2.57
4484 4602 2.571202 TGCCCTACATGTGATCTGTTCA 59.429 45.455 9.11 0.00 0.00 3.18
4485 4603 2.939103 GTGCCCTACATGTGATCTGTTC 59.061 50.000 9.11 0.00 0.00 3.18
4486 4604 2.305635 TGTGCCCTACATGTGATCTGTT 59.694 45.455 9.11 0.00 33.42 3.16
4487 4605 1.908619 TGTGCCCTACATGTGATCTGT 59.091 47.619 9.11 0.00 33.42 3.41
4488 4606 2.696989 TGTGCCCTACATGTGATCTG 57.303 50.000 9.11 0.00 33.42 2.90
4497 4615 5.423931 TCATGTTTCTAGTATGTGCCCTACA 59.576 40.000 0.00 0.00 44.87 2.74
4498 4616 5.914033 TCATGTTTCTAGTATGTGCCCTAC 58.086 41.667 0.00 0.00 0.00 3.18
4499 4617 6.553953 TTCATGTTTCTAGTATGTGCCCTA 57.446 37.500 0.00 0.00 0.00 3.53
4500 4618 5.435686 TTCATGTTTCTAGTATGTGCCCT 57.564 39.130 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.