Multiple sequence alignment - TraesCS2B01G420600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G420600 chr2B 100.000 3638 0 0 1 3638 603425209 603428846 0.000000e+00 6719.0
1 TraesCS2B01G420600 chr2B 93.536 263 14 2 149 410 171136395 171136135 4.410000e-104 388.0
2 TraesCS2B01G420600 chr2D 96.294 2968 88 9 681 3638 512922743 512925698 0.000000e+00 4852.0
3 TraesCS2B01G420600 chr2A 95.942 2341 76 8 762 3088 656702152 656704487 0.000000e+00 3779.0
4 TraesCS2B01G420600 chr2A 93.769 337 18 2 3304 3638 656705162 656705497 1.510000e-138 503.0
5 TraesCS2B01G420600 chr2A 87.845 181 13 6 3129 3301 656704495 656704674 1.710000e-48 204.0
6 TraesCS2B01G420600 chr6D 78.319 1559 258 60 1048 2570 333349266 333347752 0.000000e+00 933.0
7 TraesCS2B01G420600 chr6B 78.065 1550 281 46 1048 2570 487133238 487134755 0.000000e+00 924.0
8 TraesCS2B01G420600 chr6A 82.300 887 131 18 1691 2570 472949303 472948436 0.000000e+00 745.0
9 TraesCS2B01G420600 chr6A 85.220 318 43 4 1048 1363 472949965 472949650 1.260000e-84 324.0
10 TraesCS2B01G420600 chrUn 92.776 263 15 3 149 410 136982314 136982573 9.540000e-101 377.0
11 TraesCS2B01G420600 chrUn 83.478 115 12 5 669 782 100286905 100286797 2.310000e-17 100.0
12 TraesCS2B01G420600 chr7B 91.912 272 19 2 147 416 305923986 305924256 9.540000e-101 377.0
13 TraesCS2B01G420600 chr7B 92.105 266 17 1 147 412 174201778 174202039 4.440000e-99 372.0
14 TraesCS2B01G420600 chr7B 84.298 121 11 6 675 793 723732286 723732172 1.070000e-20 111.0
15 TraesCS2B01G420600 chr5B 92.105 266 17 2 147 412 312807793 312808054 4.440000e-99 372.0
16 TraesCS2B01G420600 chr5B 90.647 278 22 4 149 426 105688190 105688463 2.060000e-97 366.0
17 TraesCS2B01G420600 chr4B 92.105 266 17 1 147 412 47562397 47562136 4.440000e-99 372.0
18 TraesCS2B01G420600 chr3B 92.105 266 18 1 147 412 500751353 500751091 4.440000e-99 372.0
19 TraesCS2B01G420600 chr1B 92.075 265 18 1 147 411 370379639 370379900 1.600000e-98 370.0
20 TraesCS2B01G420600 chr7D 90.000 50 3 2 3163 3210 458539663 458539712 3.030000e-06 63.9
21 TraesCS2B01G420600 chr7D 90.000 50 3 2 3163 3210 458796737 458796688 3.030000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G420600 chr2B 603425209 603428846 3637 False 6719.000000 6719 100.000000 1 3638 1 chr2B.!!$F1 3637
1 TraesCS2B01G420600 chr2D 512922743 512925698 2955 False 4852.000000 4852 96.294000 681 3638 1 chr2D.!!$F1 2957
2 TraesCS2B01G420600 chr2A 656702152 656705497 3345 False 1495.333333 3779 92.518667 762 3638 3 chr2A.!!$F1 2876
3 TraesCS2B01G420600 chr6D 333347752 333349266 1514 True 933.000000 933 78.319000 1048 2570 1 chr6D.!!$R1 1522
4 TraesCS2B01G420600 chr6B 487133238 487134755 1517 False 924.000000 924 78.065000 1048 2570 1 chr6B.!!$F1 1522
5 TraesCS2B01G420600 chr6A 472948436 472949965 1529 True 534.500000 745 83.760000 1048 2570 2 chr6A.!!$R1 1522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
566 567 0.030908 AAGACTATACGCTGCGCTCC 59.969 55.000 23.51 5.7 0.00 4.70 F
1677 1691 0.175073 CGCCCTAGCTAACGGTCTTT 59.825 55.000 8.05 0.0 36.60 2.52 F
1994 2037 2.643232 GCGTGGGGGACTACTTCGT 61.643 63.158 0.00 0.0 40.14 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1982 2025 0.173708 CTGCTCCACGAAGTAGTCCC 59.826 60.000 0.00 0.00 41.61 4.46 R
2547 2599 2.124983 GCTGATCTGAAGCCGGCA 60.125 61.111 31.54 7.75 34.45 5.69 R
3302 3368 2.807676 TGACATCAGTAGAGCTGTGGA 58.192 47.619 0.00 0.00 45.23 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 6.973460 TTTTTACGGGGGTTTCAATAAGAA 57.027 33.333 0.00 0.00 0.00 2.52
47 48 6.973460 TTTTACGGGGGTTTCAATAAGAAA 57.027 33.333 0.00 0.00 43.71 2.52
68 69 8.034058 AGAAAATGACAGATTTAAGGAGTTCG 57.966 34.615 0.00 0.00 0.00 3.95
69 70 6.743575 AAATGACAGATTTAAGGAGTTCGG 57.256 37.500 0.00 0.00 0.00 4.30
70 71 4.884668 TGACAGATTTAAGGAGTTCGGT 57.115 40.909 0.00 0.00 0.00 4.69
71 72 4.817517 TGACAGATTTAAGGAGTTCGGTC 58.182 43.478 0.00 0.00 34.99 4.79
72 73 3.846360 ACAGATTTAAGGAGTTCGGTCG 58.154 45.455 0.00 0.00 0.00 4.79
73 74 3.257624 ACAGATTTAAGGAGTTCGGTCGT 59.742 43.478 0.00 0.00 0.00 4.34
74 75 4.460382 ACAGATTTAAGGAGTTCGGTCGTA 59.540 41.667 0.00 0.00 0.00 3.43
75 76 5.047802 ACAGATTTAAGGAGTTCGGTCGTAA 60.048 40.000 0.00 0.00 0.00 3.18
76 77 5.865552 CAGATTTAAGGAGTTCGGTCGTAAA 59.134 40.000 0.00 0.00 0.00 2.01
77 78 6.534079 CAGATTTAAGGAGTTCGGTCGTAAAT 59.466 38.462 0.00 0.00 0.00 1.40
78 79 6.755607 AGATTTAAGGAGTTCGGTCGTAAATC 59.244 38.462 0.00 0.00 36.06 2.17
79 80 3.947910 AAGGAGTTCGGTCGTAAATCA 57.052 42.857 0.00 0.00 0.00 2.57
80 81 3.505464 AGGAGTTCGGTCGTAAATCAG 57.495 47.619 0.00 0.00 0.00 2.90
81 82 2.824341 AGGAGTTCGGTCGTAAATCAGT 59.176 45.455 0.00 0.00 0.00 3.41
82 83 4.012374 AGGAGTTCGGTCGTAAATCAGTA 58.988 43.478 0.00 0.00 0.00 2.74
83 84 4.096081 AGGAGTTCGGTCGTAAATCAGTAG 59.904 45.833 0.00 0.00 0.00 2.57
84 85 4.142513 GGAGTTCGGTCGTAAATCAGTAGT 60.143 45.833 0.00 0.00 0.00 2.73
85 86 5.382618 AGTTCGGTCGTAAATCAGTAGTT 57.617 39.130 0.00 0.00 0.00 2.24
86 87 5.397326 AGTTCGGTCGTAAATCAGTAGTTC 58.603 41.667 0.00 0.00 0.00 3.01
87 88 5.048504 AGTTCGGTCGTAAATCAGTAGTTCA 60.049 40.000 0.00 0.00 0.00 3.18
88 89 5.375417 TCGGTCGTAAATCAGTAGTTCAA 57.625 39.130 0.00 0.00 0.00 2.69
89 90 5.771469 TCGGTCGTAAATCAGTAGTTCAAA 58.229 37.500 0.00 0.00 0.00 2.69
90 91 6.215121 TCGGTCGTAAATCAGTAGTTCAAAA 58.785 36.000 0.00 0.00 0.00 2.44
91 92 6.144402 TCGGTCGTAAATCAGTAGTTCAAAAC 59.856 38.462 0.00 0.00 0.00 2.43
92 93 6.074195 CGGTCGTAAATCAGTAGTTCAAAACA 60.074 38.462 0.00 0.00 0.00 2.83
93 94 7.359765 CGGTCGTAAATCAGTAGTTCAAAACAT 60.360 37.037 0.00 0.00 0.00 2.71
94 95 7.744715 GGTCGTAAATCAGTAGTTCAAAACATG 59.255 37.037 0.00 0.00 0.00 3.21
95 96 7.268447 GTCGTAAATCAGTAGTTCAAAACATGC 59.732 37.037 0.00 0.00 0.00 4.06
96 97 6.246332 CGTAAATCAGTAGTTCAAAACATGCG 59.754 38.462 0.00 0.00 0.00 4.73
97 98 5.940192 AATCAGTAGTTCAAAACATGCGA 57.060 34.783 0.00 0.00 0.00 5.10
98 99 4.725556 TCAGTAGTTCAAAACATGCGAC 57.274 40.909 0.00 0.00 0.00 5.19
99 100 3.183574 TCAGTAGTTCAAAACATGCGACG 59.816 43.478 0.00 0.00 0.00 5.12
100 101 3.183574 CAGTAGTTCAAAACATGCGACGA 59.816 43.478 0.00 0.00 0.00 4.20
101 102 3.805422 AGTAGTTCAAAACATGCGACGAA 59.195 39.130 0.00 0.00 0.00 3.85
102 103 3.684103 AGTTCAAAACATGCGACGAAA 57.316 38.095 0.00 0.00 0.00 3.46
103 104 4.223320 AGTTCAAAACATGCGACGAAAT 57.777 36.364 0.00 0.00 0.00 2.17
104 105 4.606961 AGTTCAAAACATGCGACGAAATT 58.393 34.783 0.00 0.00 0.00 1.82
105 106 5.753744 AGTTCAAAACATGCGACGAAATTA 58.246 33.333 0.00 0.00 0.00 1.40
106 107 6.202937 AGTTCAAAACATGCGACGAAATTAA 58.797 32.000 0.00 0.00 0.00 1.40
107 108 6.693545 AGTTCAAAACATGCGACGAAATTAAA 59.306 30.769 0.00 0.00 0.00 1.52
108 109 7.221067 AGTTCAAAACATGCGACGAAATTAAAA 59.779 29.630 0.00 0.00 0.00 1.52
109 110 7.630470 TCAAAACATGCGACGAAATTAAAAT 57.370 28.000 0.00 0.00 0.00 1.82
110 111 8.729529 TCAAAACATGCGACGAAATTAAAATA 57.270 26.923 0.00 0.00 0.00 1.40
111 112 8.631695 TCAAAACATGCGACGAAATTAAAATAC 58.368 29.630 0.00 0.00 0.00 1.89
112 113 7.500807 AAACATGCGACGAAATTAAAATACC 57.499 32.000 0.00 0.00 0.00 2.73
113 114 5.575019 ACATGCGACGAAATTAAAATACCC 58.425 37.500 0.00 0.00 0.00 3.69
114 115 4.619437 TGCGACGAAATTAAAATACCCC 57.381 40.909 0.00 0.00 0.00 4.95
115 116 4.008330 TGCGACGAAATTAAAATACCCCA 58.992 39.130 0.00 0.00 0.00 4.96
116 117 4.142643 TGCGACGAAATTAAAATACCCCAC 60.143 41.667 0.00 0.00 0.00 4.61
117 118 4.095334 GCGACGAAATTAAAATACCCCACT 59.905 41.667 0.00 0.00 0.00 4.00
118 119 5.392272 GCGACGAAATTAAAATACCCCACTT 60.392 40.000 0.00 0.00 0.00 3.16
119 120 6.183360 GCGACGAAATTAAAATACCCCACTTA 60.183 38.462 0.00 0.00 0.00 2.24
120 121 7.182089 CGACGAAATTAAAATACCCCACTTAC 58.818 38.462 0.00 0.00 0.00 2.34
121 122 7.395190 ACGAAATTAAAATACCCCACTTACC 57.605 36.000 0.00 0.00 0.00 2.85
122 123 6.947158 ACGAAATTAAAATACCCCACTTACCA 59.053 34.615 0.00 0.00 0.00 3.25
123 124 7.450944 ACGAAATTAAAATACCCCACTTACCAA 59.549 33.333 0.00 0.00 0.00 3.67
124 125 8.305317 CGAAATTAAAATACCCCACTTACCAAA 58.695 33.333 0.00 0.00 0.00 3.28
127 128 9.952030 AATTAAAATACCCCACTTACCAAATTG 57.048 29.630 0.00 0.00 0.00 2.32
128 129 8.722622 TTAAAATACCCCACTTACCAAATTGA 57.277 30.769 0.00 0.00 0.00 2.57
129 130 7.619512 AAAATACCCCACTTACCAAATTGAA 57.380 32.000 0.00 0.00 0.00 2.69
130 131 7.806680 AAATACCCCACTTACCAAATTGAAT 57.193 32.000 0.00 0.00 0.00 2.57
131 132 8.903059 AAATACCCCACTTACCAAATTGAATA 57.097 30.769 0.00 0.00 0.00 1.75
132 133 7.891498 ATACCCCACTTACCAAATTGAATAC 57.109 36.000 0.00 0.00 0.00 1.89
133 134 5.646215 ACCCCACTTACCAAATTGAATACA 58.354 37.500 0.00 0.00 0.00 2.29
134 135 6.260663 ACCCCACTTACCAAATTGAATACAT 58.739 36.000 0.00 0.00 0.00 2.29
135 136 6.154363 ACCCCACTTACCAAATTGAATACATG 59.846 38.462 0.00 0.00 0.00 3.21
136 137 6.154363 CCCCACTTACCAAATTGAATACATGT 59.846 38.462 2.69 2.69 0.00 3.21
137 138 7.310361 CCCCACTTACCAAATTGAATACATGTT 60.310 37.037 2.30 0.00 0.00 2.71
138 139 7.545265 CCCACTTACCAAATTGAATACATGTTG 59.455 37.037 2.30 0.00 0.00 3.33
139 140 8.303156 CCACTTACCAAATTGAATACATGTTGA 58.697 33.333 2.30 0.00 0.00 3.18
140 141 9.345517 CACTTACCAAATTGAATACATGTTGAG 57.654 33.333 2.30 0.00 0.00 3.02
141 142 8.028938 ACTTACCAAATTGAATACATGTTGAGC 58.971 33.333 2.30 0.00 0.00 4.26
142 143 6.343716 ACCAAATTGAATACATGTTGAGCA 57.656 33.333 2.30 0.00 0.00 4.26
143 144 6.938507 ACCAAATTGAATACATGTTGAGCAT 58.061 32.000 2.30 0.00 38.60 3.79
154 155 3.887621 TGTTGAGCATGTAGTACTCCC 57.112 47.619 0.00 0.00 0.00 4.30
155 156 3.441101 TGTTGAGCATGTAGTACTCCCT 58.559 45.455 0.00 0.00 0.00 4.20
156 157 3.838317 TGTTGAGCATGTAGTACTCCCTT 59.162 43.478 0.00 0.00 0.00 3.95
157 158 4.081642 TGTTGAGCATGTAGTACTCCCTTC 60.082 45.833 0.00 0.00 0.00 3.46
158 159 3.708451 TGAGCATGTAGTACTCCCTTCA 58.292 45.455 0.00 0.00 0.00 3.02
159 160 4.290093 TGAGCATGTAGTACTCCCTTCAT 58.710 43.478 0.00 0.00 0.00 2.57
160 161 4.716784 TGAGCATGTAGTACTCCCTTCATT 59.283 41.667 0.00 0.00 0.00 2.57
161 162 5.189736 TGAGCATGTAGTACTCCCTTCATTT 59.810 40.000 0.00 0.00 0.00 2.32
162 163 6.067217 AGCATGTAGTACTCCCTTCATTTT 57.933 37.500 0.00 0.00 0.00 1.82
163 164 6.485171 AGCATGTAGTACTCCCTTCATTTTT 58.515 36.000 0.00 0.00 0.00 1.94
164 165 7.630082 AGCATGTAGTACTCCCTTCATTTTTA 58.370 34.615 0.00 0.00 0.00 1.52
165 166 8.275040 AGCATGTAGTACTCCCTTCATTTTTAT 58.725 33.333 0.00 0.00 0.00 1.40
166 167 8.903820 GCATGTAGTACTCCCTTCATTTTTATT 58.096 33.333 0.00 0.00 0.00 1.40
172 173 9.682465 AGTACTCCCTTCATTTTTATTTAGTCC 57.318 33.333 0.00 0.00 0.00 3.85
173 174 7.625828 ACTCCCTTCATTTTTATTTAGTCCG 57.374 36.000 0.00 0.00 0.00 4.79
174 175 7.173032 ACTCCCTTCATTTTTATTTAGTCCGT 58.827 34.615 0.00 0.00 0.00 4.69
175 176 8.323567 ACTCCCTTCATTTTTATTTAGTCCGTA 58.676 33.333 0.00 0.00 0.00 4.02
176 177 9.338622 CTCCCTTCATTTTTATTTAGTCCGTAT 57.661 33.333 0.00 0.00 0.00 3.06
196 197 9.485206 TCCGTATATTAGCTTTGATAAAAGTCC 57.515 33.333 4.42 0.00 32.52 3.85
197 198 9.268268 CCGTATATTAGCTTTGATAAAAGTCCA 57.732 33.333 4.42 0.00 32.52 4.02
200 201 8.986929 ATATTAGCTTTGATAAAAGTCCAGCT 57.013 30.769 4.42 0.00 37.46 4.24
201 202 7.709149 ATTAGCTTTGATAAAAGTCCAGCTT 57.291 32.000 4.42 0.00 36.06 3.74
203 204 8.630054 TTAGCTTTGATAAAAGTCCAGCTTTA 57.370 30.769 4.42 0.00 45.91 1.85
204 205 6.914259 AGCTTTGATAAAAGTCCAGCTTTAC 58.086 36.000 4.42 0.00 45.91 2.01
205 206 6.490040 AGCTTTGATAAAAGTCCAGCTTTACA 59.510 34.615 4.42 0.00 45.91 2.41
206 207 7.014230 AGCTTTGATAAAAGTCCAGCTTTACAA 59.986 33.333 4.42 0.00 45.91 2.41
207 208 7.651704 GCTTTGATAAAAGTCCAGCTTTACAAA 59.348 33.333 4.42 0.00 45.91 2.83
208 209 8.865590 TTTGATAAAAGTCCAGCTTTACAAAC 57.134 30.769 0.00 0.00 45.91 2.93
209 210 7.817418 TGATAAAAGTCCAGCTTTACAAACT 57.183 32.000 0.00 0.00 45.91 2.66
210 211 8.232913 TGATAAAAGTCCAGCTTTACAAACTT 57.767 30.769 0.00 0.00 45.91 2.66
211 212 8.691797 TGATAAAAGTCCAGCTTTACAAACTTT 58.308 29.630 0.00 0.00 45.91 2.66
212 213 8.871686 ATAAAAGTCCAGCTTTACAAACTTTG 57.128 30.769 0.00 0.00 45.91 2.77
213 214 6.524101 AAAGTCCAGCTTTACAAACTTTGA 57.476 33.333 8.55 0.00 44.90 2.69
214 215 5.500645 AGTCCAGCTTTACAAACTTTGAC 57.499 39.130 8.55 0.00 0.00 3.18
215 216 4.338400 AGTCCAGCTTTACAAACTTTGACC 59.662 41.667 8.55 0.00 0.00 4.02
216 217 4.097286 GTCCAGCTTTACAAACTTTGACCA 59.903 41.667 8.55 0.00 0.00 4.02
217 218 4.707448 TCCAGCTTTACAAACTTTGACCAA 59.293 37.500 8.55 0.00 0.00 3.67
218 219 5.043248 CCAGCTTTACAAACTTTGACCAAG 58.957 41.667 8.55 7.77 38.64 3.61
307 308 9.905713 ATGTACTTTCACATCATATAGGTTTGT 57.094 29.630 0.00 0.00 33.89 2.83
308 309 9.733556 TGTACTTTCACATCATATAGGTTTGTT 57.266 29.630 0.00 0.00 0.00 2.83
385 386 9.719355 TTTAACTTCAGTCAACTCTAATATGCA 57.281 29.630 0.00 0.00 0.00 3.96
386 387 7.840342 AACTTCAGTCAACTCTAATATGCAG 57.160 36.000 0.00 0.00 0.00 4.41
387 388 7.175347 ACTTCAGTCAACTCTAATATGCAGA 57.825 36.000 0.00 0.00 0.00 4.26
388 389 7.264221 ACTTCAGTCAACTCTAATATGCAGAG 58.736 38.462 11.37 11.37 44.28 3.35
400 401 9.478019 CTCTAATATGCAGAGTAAACAAAAACG 57.522 33.333 0.00 0.00 35.75 3.60
401 402 9.210329 TCTAATATGCAGAGTAAACAAAAACGA 57.790 29.630 0.00 0.00 0.00 3.85
402 403 9.820229 CTAATATGCAGAGTAAACAAAAACGAA 57.180 29.630 0.00 0.00 0.00 3.85
403 404 8.728088 AATATGCAGAGTAAACAAAAACGAAG 57.272 30.769 0.00 0.00 0.00 3.79
404 405 4.915704 TGCAGAGTAAACAAAAACGAAGG 58.084 39.130 0.00 0.00 0.00 3.46
405 406 4.201970 TGCAGAGTAAACAAAAACGAAGGG 60.202 41.667 0.00 0.00 0.00 3.95
406 407 4.035909 GCAGAGTAAACAAAAACGAAGGGA 59.964 41.667 0.00 0.00 0.00 4.20
407 408 5.748592 CAGAGTAAACAAAAACGAAGGGAG 58.251 41.667 0.00 0.00 0.00 4.30
408 409 5.296035 CAGAGTAAACAAAAACGAAGGGAGT 59.704 40.000 0.00 0.00 0.00 3.85
409 410 6.480981 CAGAGTAAACAAAAACGAAGGGAGTA 59.519 38.462 0.00 0.00 0.00 2.59
410 411 6.481313 AGAGTAAACAAAAACGAAGGGAGTAC 59.519 38.462 0.00 0.00 0.00 2.73
411 412 6.351711 AGTAAACAAAAACGAAGGGAGTACT 58.648 36.000 0.00 0.00 0.00 2.73
412 413 5.494632 AAACAAAAACGAAGGGAGTACTG 57.505 39.130 0.00 0.00 0.00 2.74
413 414 4.411256 ACAAAAACGAAGGGAGTACTGA 57.589 40.909 0.00 0.00 0.00 3.41
414 415 4.773013 ACAAAAACGAAGGGAGTACTGAA 58.227 39.130 0.00 0.00 0.00 3.02
415 416 4.573607 ACAAAAACGAAGGGAGTACTGAAC 59.426 41.667 0.00 0.00 0.00 3.18
416 417 4.411256 AAAACGAAGGGAGTACTGAACA 57.589 40.909 0.00 0.00 0.00 3.18
417 418 3.382048 AACGAAGGGAGTACTGAACAC 57.618 47.619 0.00 0.00 0.00 3.32
418 419 2.313317 ACGAAGGGAGTACTGAACACA 58.687 47.619 0.00 0.00 0.00 3.72
419 420 2.696707 ACGAAGGGAGTACTGAACACAA 59.303 45.455 0.00 0.00 0.00 3.33
420 421 3.243771 ACGAAGGGAGTACTGAACACAAG 60.244 47.826 0.00 0.00 0.00 3.16
421 422 3.005472 CGAAGGGAGTACTGAACACAAGA 59.995 47.826 0.00 0.00 0.00 3.02
422 423 4.322049 CGAAGGGAGTACTGAACACAAGAT 60.322 45.833 0.00 0.00 0.00 2.40
423 424 5.105877 CGAAGGGAGTACTGAACACAAGATA 60.106 44.000 0.00 0.00 0.00 1.98
424 425 6.571731 CGAAGGGAGTACTGAACACAAGATAA 60.572 42.308 0.00 0.00 0.00 1.75
425 426 6.681729 AGGGAGTACTGAACACAAGATAAA 57.318 37.500 0.00 0.00 0.00 1.40
426 427 7.259088 AGGGAGTACTGAACACAAGATAAAT 57.741 36.000 0.00 0.00 0.00 1.40
427 428 7.106239 AGGGAGTACTGAACACAAGATAAATG 58.894 38.462 0.00 0.00 0.00 2.32
428 429 7.038302 AGGGAGTACTGAACACAAGATAAATGA 60.038 37.037 0.00 0.00 0.00 2.57
429 430 7.606456 GGGAGTACTGAACACAAGATAAATGAA 59.394 37.037 0.00 0.00 0.00 2.57
430 431 8.660373 GGAGTACTGAACACAAGATAAATGAAG 58.340 37.037 0.00 0.00 0.00 3.02
431 432 8.034058 AGTACTGAACACAAGATAAATGAAGC 57.966 34.615 0.00 0.00 0.00 3.86
432 433 7.880195 AGTACTGAACACAAGATAAATGAAGCT 59.120 33.333 0.00 0.00 0.00 3.74
433 434 9.151471 GTACTGAACACAAGATAAATGAAGCTA 57.849 33.333 0.00 0.00 0.00 3.32
434 435 8.798859 ACTGAACACAAGATAAATGAAGCTAT 57.201 30.769 0.00 0.00 0.00 2.97
435 436 9.236006 ACTGAACACAAGATAAATGAAGCTATT 57.764 29.630 0.00 0.00 0.00 1.73
440 441 9.461312 ACACAAGATAAATGAAGCTATTAACCA 57.539 29.630 0.00 0.00 0.00 3.67
450 451 4.170468 AGCTATTAACCATTCCTGGGTG 57.830 45.455 0.00 0.00 44.37 4.61
451 452 2.623416 GCTATTAACCATTCCTGGGTGC 59.377 50.000 0.00 0.00 44.37 5.01
452 453 2.159179 ATTAACCATTCCTGGGTGCC 57.841 50.000 0.00 0.00 44.37 5.01
453 454 1.080638 TTAACCATTCCTGGGTGCCT 58.919 50.000 0.00 0.00 44.37 4.75
454 455 1.080638 TAACCATTCCTGGGTGCCTT 58.919 50.000 0.00 0.00 44.37 4.35
455 456 1.272425 TAACCATTCCTGGGTGCCTTG 60.272 52.381 0.00 0.00 44.37 3.61
456 457 1.383799 CCATTCCTGGGTGCCTTGA 59.616 57.895 0.00 0.00 39.04 3.02
457 458 0.967380 CCATTCCTGGGTGCCTTGAC 60.967 60.000 0.00 0.00 39.04 3.18
458 459 0.038744 CATTCCTGGGTGCCTTGACT 59.961 55.000 0.00 0.00 0.00 3.41
459 460 0.038744 ATTCCTGGGTGCCTTGACTG 59.961 55.000 0.00 0.00 0.00 3.51
460 461 2.674380 CCTGGGTGCCTTGACTGC 60.674 66.667 0.00 0.00 0.00 4.40
461 462 2.433446 CTGGGTGCCTTGACTGCT 59.567 61.111 0.00 0.00 0.00 4.24
462 463 1.970114 CTGGGTGCCTTGACTGCTG 60.970 63.158 0.00 0.00 0.00 4.41
463 464 2.674380 GGGTGCCTTGACTGCTGG 60.674 66.667 0.00 0.00 0.00 4.85
464 465 2.674380 GGTGCCTTGACTGCTGGG 60.674 66.667 0.00 0.00 0.00 4.45
465 466 2.431683 GTGCCTTGACTGCTGGGA 59.568 61.111 0.00 0.00 0.00 4.37
466 467 1.673665 GTGCCTTGACTGCTGGGAG 60.674 63.158 0.00 0.00 0.00 4.30
467 468 2.045536 GCCTTGACTGCTGGGAGG 60.046 66.667 0.00 0.57 0.00 4.30
468 469 2.045536 CCTTGACTGCTGGGAGGC 60.046 66.667 0.00 0.00 0.00 4.70
469 470 2.752358 CTTGACTGCTGGGAGGCA 59.248 61.111 0.00 0.00 40.15 4.75
470 471 1.302285 CTTGACTGCTGGGAGGCAT 59.698 57.895 0.00 0.00 41.63 4.40
471 472 0.323178 CTTGACTGCTGGGAGGCATT 60.323 55.000 0.00 0.00 41.63 3.56
472 473 0.112995 TTGACTGCTGGGAGGCATTT 59.887 50.000 0.00 0.00 41.63 2.32
473 474 0.991146 TGACTGCTGGGAGGCATTTA 59.009 50.000 0.00 0.00 41.63 1.40
474 475 1.340017 TGACTGCTGGGAGGCATTTAC 60.340 52.381 0.00 0.00 41.63 2.01
475 476 0.392998 ACTGCTGGGAGGCATTTACG 60.393 55.000 0.00 0.00 41.63 3.18
476 477 1.077787 TGCTGGGAGGCATTTACGG 60.078 57.895 0.00 0.00 37.29 4.02
477 478 1.223487 GCTGGGAGGCATTTACGGA 59.777 57.895 0.00 0.00 0.00 4.69
478 479 0.179018 GCTGGGAGGCATTTACGGAT 60.179 55.000 0.00 0.00 0.00 4.18
479 480 1.597742 CTGGGAGGCATTTACGGATG 58.402 55.000 0.00 0.00 0.00 3.51
480 481 1.140852 CTGGGAGGCATTTACGGATGA 59.859 52.381 0.00 0.00 0.00 2.92
481 482 1.140852 TGGGAGGCATTTACGGATGAG 59.859 52.381 0.00 0.00 0.00 2.90
482 483 1.141053 GGGAGGCATTTACGGATGAGT 59.859 52.381 0.00 0.00 0.00 3.41
483 484 2.213499 GGAGGCATTTACGGATGAGTG 58.787 52.381 0.00 0.00 0.00 3.51
484 485 2.158957 GGAGGCATTTACGGATGAGTGA 60.159 50.000 0.00 0.00 0.00 3.41
485 486 3.495100 GGAGGCATTTACGGATGAGTGAT 60.495 47.826 0.00 0.00 0.00 3.06
486 487 4.130118 GAGGCATTTACGGATGAGTGATT 58.870 43.478 0.00 0.00 0.00 2.57
487 488 5.290493 AGGCATTTACGGATGAGTGATTA 57.710 39.130 0.00 0.00 0.00 1.75
488 489 5.680619 AGGCATTTACGGATGAGTGATTAA 58.319 37.500 0.00 0.00 0.00 1.40
489 490 6.299141 AGGCATTTACGGATGAGTGATTAAT 58.701 36.000 0.00 0.00 0.00 1.40
490 491 6.772716 AGGCATTTACGGATGAGTGATTAATT 59.227 34.615 0.00 0.00 0.00 1.40
491 492 6.857964 GGCATTTACGGATGAGTGATTAATTG 59.142 38.462 0.00 0.00 0.00 2.32
492 493 6.360681 GCATTTACGGATGAGTGATTAATTGC 59.639 38.462 0.00 0.00 0.00 3.56
493 494 6.371809 TTTACGGATGAGTGATTAATTGCC 57.628 37.500 0.00 0.00 0.00 4.52
494 495 3.884895 ACGGATGAGTGATTAATTGCCA 58.115 40.909 0.00 0.00 0.00 4.92
495 496 3.879295 ACGGATGAGTGATTAATTGCCAG 59.121 43.478 0.00 0.00 0.00 4.85
496 497 3.879295 CGGATGAGTGATTAATTGCCAGT 59.121 43.478 0.00 0.00 0.00 4.00
497 498 4.024556 CGGATGAGTGATTAATTGCCAGTC 60.025 45.833 4.32 4.32 0.00 3.51
498 499 4.024556 GGATGAGTGATTAATTGCCAGTCG 60.025 45.833 6.17 0.00 34.03 4.18
499 500 3.270027 TGAGTGATTAATTGCCAGTCGG 58.730 45.455 6.17 0.00 34.03 4.79
500 501 2.614057 GAGTGATTAATTGCCAGTCGGG 59.386 50.000 0.00 0.00 40.85 5.14
510 511 2.767536 CCAGTCGGGCTGTTGTATG 58.232 57.895 9.03 0.00 43.55 2.39
511 512 1.369091 CCAGTCGGGCTGTTGTATGC 61.369 60.000 9.03 0.00 43.55 3.14
512 513 0.673333 CAGTCGGGCTGTTGTATGCA 60.673 55.000 0.34 0.00 40.27 3.96
513 514 0.036164 AGTCGGGCTGTTGTATGCAA 59.964 50.000 0.00 0.00 0.00 4.08
528 529 4.988598 CAACTGGCGCGTGGGACT 62.989 66.667 8.43 0.00 0.00 3.85
529 530 4.250305 AACTGGCGCGTGGGACTT 62.250 61.111 8.43 0.00 0.00 3.01
530 531 4.988598 ACTGGCGCGTGGGACTTG 62.989 66.667 8.43 0.00 0.00 3.16
531 532 4.988598 CTGGCGCGTGGGACTTGT 62.989 66.667 8.43 0.00 0.00 3.16
532 533 3.583276 CTGGCGCGTGGGACTTGTA 62.583 63.158 8.43 0.00 0.00 2.41
533 534 2.813908 GGCGCGTGGGACTTGTAG 60.814 66.667 8.43 0.00 0.00 2.74
534 535 3.488090 GCGCGTGGGACTTGTAGC 61.488 66.667 8.43 0.00 0.00 3.58
535 536 2.261671 CGCGTGGGACTTGTAGCT 59.738 61.111 0.00 0.00 0.00 3.32
536 537 2.094659 CGCGTGGGACTTGTAGCTG 61.095 63.158 0.00 0.00 0.00 4.24
537 538 2.391389 GCGTGGGACTTGTAGCTGC 61.391 63.158 0.00 0.00 0.00 5.25
538 539 1.741770 CGTGGGACTTGTAGCTGCC 60.742 63.158 0.00 0.00 0.00 4.85
539 540 1.377333 GTGGGACTTGTAGCTGCCC 60.377 63.158 0.00 0.00 39.29 5.36
540 541 1.538876 TGGGACTTGTAGCTGCCCT 60.539 57.895 0.00 0.00 39.57 5.19
541 542 0.252513 TGGGACTTGTAGCTGCCCTA 60.253 55.000 0.00 0.00 39.57 3.53
542 543 0.909623 GGGACTTGTAGCTGCCCTAA 59.090 55.000 0.00 0.00 35.86 2.69
543 544 1.490910 GGGACTTGTAGCTGCCCTAAT 59.509 52.381 0.00 0.00 35.86 1.73
544 545 2.704065 GGGACTTGTAGCTGCCCTAATA 59.296 50.000 0.00 0.00 35.86 0.98
545 546 3.494573 GGGACTTGTAGCTGCCCTAATAC 60.495 52.174 0.00 0.00 35.86 1.89
546 547 3.134081 GGACTTGTAGCTGCCCTAATACA 59.866 47.826 0.00 0.00 0.00 2.29
547 548 4.383770 GGACTTGTAGCTGCCCTAATACAA 60.384 45.833 0.00 9.95 36.83 2.41
548 549 5.174037 ACTTGTAGCTGCCCTAATACAAA 57.826 39.130 11.10 0.00 37.60 2.83
549 550 5.186198 ACTTGTAGCTGCCCTAATACAAAG 58.814 41.667 11.10 8.60 37.60 2.77
550 551 5.045869 ACTTGTAGCTGCCCTAATACAAAGA 60.046 40.000 11.10 0.00 37.60 2.52
551 552 4.766375 TGTAGCTGCCCTAATACAAAGAC 58.234 43.478 0.00 0.00 0.00 3.01
552 553 4.469945 TGTAGCTGCCCTAATACAAAGACT 59.530 41.667 0.00 0.00 0.00 3.24
553 554 5.659525 TGTAGCTGCCCTAATACAAAGACTA 59.340 40.000 0.00 0.00 0.00 2.59
554 555 5.896073 AGCTGCCCTAATACAAAGACTAT 57.104 39.130 0.00 0.00 0.00 2.12
555 556 6.996180 AGCTGCCCTAATACAAAGACTATA 57.004 37.500 0.00 0.00 0.00 1.31
556 557 6.760291 AGCTGCCCTAATACAAAGACTATAC 58.240 40.000 0.00 0.00 0.00 1.47
557 558 5.634020 GCTGCCCTAATACAAAGACTATACG 59.366 44.000 0.00 0.00 0.00 3.06
558 559 5.535333 TGCCCTAATACAAAGACTATACGC 58.465 41.667 0.00 0.00 0.00 4.42
559 560 5.303589 TGCCCTAATACAAAGACTATACGCT 59.696 40.000 0.00 0.00 0.00 5.07
560 561 5.634020 GCCCTAATACAAAGACTATACGCTG 59.366 44.000 0.00 0.00 0.00 5.18
561 562 5.634020 CCCTAATACAAAGACTATACGCTGC 59.366 44.000 0.00 0.00 0.00 5.25
562 563 5.342525 CCTAATACAAAGACTATACGCTGCG 59.657 44.000 21.91 21.91 0.00 5.18
563 564 1.278238 ACAAAGACTATACGCTGCGC 58.722 50.000 23.51 0.00 0.00 6.09
564 565 1.135083 ACAAAGACTATACGCTGCGCT 60.135 47.619 23.51 12.46 0.00 5.92
565 566 1.518929 CAAAGACTATACGCTGCGCTC 59.481 52.381 23.51 8.86 0.00 5.03
566 567 0.030908 AAGACTATACGCTGCGCTCC 59.969 55.000 23.51 5.70 0.00 4.70
567 568 1.371881 GACTATACGCTGCGCTCCC 60.372 63.158 23.51 2.98 0.00 4.30
568 569 2.429236 CTATACGCTGCGCTCCCG 60.429 66.667 23.51 11.17 37.57 5.14
569 570 2.903350 TATACGCTGCGCTCCCGA 60.903 61.111 23.51 0.74 36.29 5.14
570 571 2.402282 CTATACGCTGCGCTCCCGAA 62.402 60.000 23.51 0.00 36.29 4.30
571 572 2.007113 TATACGCTGCGCTCCCGAAA 62.007 55.000 23.51 8.77 36.29 3.46
584 585 3.423154 CGAAACGGACCAGGCTGC 61.423 66.667 9.56 0.00 0.00 5.25
585 586 2.281484 GAAACGGACCAGGCTGCA 60.281 61.111 9.56 0.00 0.00 4.41
586 587 1.896660 GAAACGGACCAGGCTGCAA 60.897 57.895 9.56 0.00 0.00 4.08
587 588 2.130073 GAAACGGACCAGGCTGCAAC 62.130 60.000 9.56 2.11 0.00 4.17
588 589 2.624674 AAACGGACCAGGCTGCAACT 62.625 55.000 9.56 0.00 0.00 3.16
589 590 1.764571 AACGGACCAGGCTGCAACTA 61.765 55.000 9.56 0.00 0.00 2.24
590 591 1.003839 CGGACCAGGCTGCAACTAA 60.004 57.895 9.56 0.00 0.00 2.24
591 592 0.392998 CGGACCAGGCTGCAACTAAT 60.393 55.000 9.56 0.00 0.00 1.73
592 593 1.839424 GGACCAGGCTGCAACTAATT 58.161 50.000 9.56 0.00 0.00 1.40
593 594 2.171003 GGACCAGGCTGCAACTAATTT 58.829 47.619 9.56 0.00 0.00 1.82
594 595 2.562738 GGACCAGGCTGCAACTAATTTT 59.437 45.455 9.56 0.00 0.00 1.82
595 596 3.367395 GGACCAGGCTGCAACTAATTTTC 60.367 47.826 9.56 0.00 0.00 2.29
596 597 3.230134 ACCAGGCTGCAACTAATTTTCA 58.770 40.909 9.56 0.00 0.00 2.69
597 598 3.005791 ACCAGGCTGCAACTAATTTTCAC 59.994 43.478 9.56 0.00 0.00 3.18
598 599 3.236816 CAGGCTGCAACTAATTTTCACG 58.763 45.455 0.00 0.00 0.00 4.35
599 600 2.228822 AGGCTGCAACTAATTTTCACGG 59.771 45.455 0.50 0.00 0.00 4.94
600 601 2.227865 GGCTGCAACTAATTTTCACGGA 59.772 45.455 0.50 0.00 0.00 4.69
601 602 3.492313 GCTGCAACTAATTTTCACGGAG 58.508 45.455 0.00 0.00 0.00 4.63
602 603 3.492313 CTGCAACTAATTTTCACGGAGC 58.508 45.455 0.00 0.00 0.00 4.70
603 604 3.146066 TGCAACTAATTTTCACGGAGCT 58.854 40.909 0.00 0.00 0.00 4.09
604 605 3.058293 TGCAACTAATTTTCACGGAGCTG 60.058 43.478 0.00 0.00 0.00 4.24
605 606 3.058224 GCAACTAATTTTCACGGAGCTGT 60.058 43.478 0.00 0.00 0.00 4.40
606 607 4.556699 GCAACTAATTTTCACGGAGCTGTT 60.557 41.667 0.00 0.00 0.00 3.16
607 608 5.334569 GCAACTAATTTTCACGGAGCTGTTA 60.335 40.000 0.00 0.00 0.00 2.41
608 609 6.664515 CAACTAATTTTCACGGAGCTGTTAA 58.335 36.000 0.00 0.00 0.00 2.01
609 610 6.870971 ACTAATTTTCACGGAGCTGTTAAA 57.129 33.333 0.00 0.00 0.00 1.52
610 611 7.266922 ACTAATTTTCACGGAGCTGTTAAAA 57.733 32.000 0.00 4.56 31.67 1.52
611 612 7.136772 ACTAATTTTCACGGAGCTGTTAAAAC 58.863 34.615 0.00 0.00 30.35 2.43
612 613 3.974871 TTTCACGGAGCTGTTAAAACC 57.025 42.857 0.00 0.00 0.00 3.27
614 615 1.068895 TCACGGAGCTGTTAAAACCGA 59.931 47.619 14.00 0.00 45.31 4.69
615 616 1.459592 CACGGAGCTGTTAAAACCGAG 59.540 52.381 14.00 3.06 45.31 4.63
616 617 0.442699 CGGAGCTGTTAAAACCGAGC 59.557 55.000 1.71 0.00 45.31 5.03
617 618 1.809684 GGAGCTGTTAAAACCGAGCT 58.190 50.000 7.25 7.25 39.92 4.09
618 619 2.152016 GGAGCTGTTAAAACCGAGCTT 58.848 47.619 8.55 0.00 38.09 3.74
619 620 2.552743 GGAGCTGTTAAAACCGAGCTTT 59.447 45.455 8.55 0.00 38.09 3.51
620 621 3.749609 GGAGCTGTTAAAACCGAGCTTTA 59.250 43.478 8.55 0.00 38.09 1.85
621 622 4.378149 GGAGCTGTTAAAACCGAGCTTTAC 60.378 45.833 8.55 1.62 38.09 2.01
622 623 4.131596 AGCTGTTAAAACCGAGCTTTACA 58.868 39.130 2.72 0.00 35.50 2.41
623 624 4.213482 AGCTGTTAAAACCGAGCTTTACAG 59.787 41.667 2.72 0.00 35.50 2.74
632 633 2.125673 GCTTTACAGCTCCGCGGA 60.126 61.111 29.03 29.03 43.51 5.54
633 634 2.167861 GCTTTACAGCTCCGCGGAG 61.168 63.158 43.74 43.74 43.51 4.63
634 635 1.215647 CTTTACAGCTCCGCGGAGT 59.784 57.895 45.36 33.35 43.70 3.85
635 636 1.078759 CTTTACAGCTCCGCGGAGTG 61.079 60.000 45.36 39.72 43.70 3.51
636 637 1.529152 TTTACAGCTCCGCGGAGTGA 61.529 55.000 45.36 29.46 43.07 3.41
637 638 1.934220 TTACAGCTCCGCGGAGTGAG 61.934 60.000 45.36 36.56 43.07 3.51
638 639 2.814913 TACAGCTCCGCGGAGTGAGA 62.815 60.000 45.36 31.01 43.07 3.27
639 640 2.676822 AGCTCCGCGGAGTGAGAA 60.677 61.111 45.36 18.10 43.07 2.87
640 641 2.261671 GCTCCGCGGAGTGAGAAA 59.738 61.111 45.36 17.34 43.07 2.52
641 642 1.807573 GCTCCGCGGAGTGAGAAAG 60.808 63.158 45.36 26.18 43.07 2.62
642 643 1.807573 CTCCGCGGAGTGAGAAAGC 60.808 63.158 40.77 0.00 43.07 3.51
644 645 3.181967 CGCGGAGTGAGAAAGCGG 61.182 66.667 0.00 0.00 46.06 5.52
645 646 2.261671 GCGGAGTGAGAAAGCGGA 59.738 61.111 0.00 0.00 0.00 5.54
646 647 1.807573 GCGGAGTGAGAAAGCGGAG 60.808 63.158 0.00 0.00 0.00 4.63
647 648 1.587054 CGGAGTGAGAAAGCGGAGT 59.413 57.895 0.00 0.00 0.00 3.85
648 649 0.734253 CGGAGTGAGAAAGCGGAGTG 60.734 60.000 0.00 0.00 0.00 3.51
649 650 0.390472 GGAGTGAGAAAGCGGAGTGG 60.390 60.000 0.00 0.00 0.00 4.00
650 651 0.603569 GAGTGAGAAAGCGGAGTGGA 59.396 55.000 0.00 0.00 0.00 4.02
651 652 0.605589 AGTGAGAAAGCGGAGTGGAG 59.394 55.000 0.00 0.00 0.00 3.86
652 653 0.603569 GTGAGAAAGCGGAGTGGAGA 59.396 55.000 0.00 0.00 0.00 3.71
653 654 0.891373 TGAGAAAGCGGAGTGGAGAG 59.109 55.000 0.00 0.00 0.00 3.20
654 655 1.178276 GAGAAAGCGGAGTGGAGAGA 58.822 55.000 0.00 0.00 0.00 3.10
655 656 1.754226 GAGAAAGCGGAGTGGAGAGAT 59.246 52.381 0.00 0.00 0.00 2.75
656 657 2.167487 GAGAAAGCGGAGTGGAGAGATT 59.833 50.000 0.00 0.00 0.00 2.40
657 658 2.167487 AGAAAGCGGAGTGGAGAGATTC 59.833 50.000 0.00 0.00 0.00 2.52
658 659 1.859302 AAGCGGAGTGGAGAGATTCT 58.141 50.000 0.00 0.00 0.00 2.40
659 660 1.110442 AGCGGAGTGGAGAGATTCTG 58.890 55.000 0.00 0.00 0.00 3.02
660 661 1.107114 GCGGAGTGGAGAGATTCTGA 58.893 55.000 0.00 0.00 0.00 3.27
661 662 1.478510 GCGGAGTGGAGAGATTCTGAA 59.521 52.381 0.00 0.00 0.00 3.02
662 663 2.737039 GCGGAGTGGAGAGATTCTGAAC 60.737 54.545 0.00 0.00 0.00 3.18
663 664 2.493675 CGGAGTGGAGAGATTCTGAACA 59.506 50.000 0.00 0.00 0.00 3.18
664 665 3.056536 CGGAGTGGAGAGATTCTGAACAA 60.057 47.826 0.00 0.00 0.00 2.83
665 666 4.502962 GGAGTGGAGAGATTCTGAACAAG 58.497 47.826 0.00 0.00 0.00 3.16
666 667 4.502962 GAGTGGAGAGATTCTGAACAAGG 58.497 47.826 0.00 0.00 0.00 3.61
667 668 3.906846 AGTGGAGAGATTCTGAACAAGGT 59.093 43.478 0.00 0.00 0.00 3.50
668 669 4.020662 AGTGGAGAGATTCTGAACAAGGTC 60.021 45.833 0.00 0.00 0.00 3.85
669 670 4.020662 GTGGAGAGATTCTGAACAAGGTCT 60.021 45.833 0.00 0.00 0.00 3.85
670 671 4.594920 TGGAGAGATTCTGAACAAGGTCTT 59.405 41.667 0.00 0.00 0.00 3.01
671 672 5.780282 TGGAGAGATTCTGAACAAGGTCTTA 59.220 40.000 0.00 0.00 0.00 2.10
672 673 6.071108 TGGAGAGATTCTGAACAAGGTCTTAG 60.071 42.308 0.00 0.00 0.00 2.18
673 674 6.071051 GGAGAGATTCTGAACAAGGTCTTAGT 60.071 42.308 0.00 0.00 0.00 2.24
674 675 7.122948 GGAGAGATTCTGAACAAGGTCTTAGTA 59.877 40.741 0.00 0.00 0.00 1.82
675 676 8.602472 AGAGATTCTGAACAAGGTCTTAGTAT 57.398 34.615 0.00 0.00 0.00 2.12
676 677 8.474025 AGAGATTCTGAACAAGGTCTTAGTATG 58.526 37.037 0.00 0.00 0.00 2.39
677 678 8.140112 AGATTCTGAACAAGGTCTTAGTATGT 57.860 34.615 0.00 0.00 0.00 2.29
678 679 9.256228 AGATTCTGAACAAGGTCTTAGTATGTA 57.744 33.333 0.00 0.00 0.00 2.29
679 680 9.303537 GATTCTGAACAAGGTCTTAGTATGTAC 57.696 37.037 0.00 0.00 0.00 2.90
680 681 7.166691 TCTGAACAAGGTCTTAGTATGTACC 57.833 40.000 0.00 0.00 0.00 3.34
681 682 6.722590 TCTGAACAAGGTCTTAGTATGTACCA 59.277 38.462 0.00 0.00 34.29 3.25
682 683 7.233962 TCTGAACAAGGTCTTAGTATGTACCAA 59.766 37.037 0.00 0.00 34.29 3.67
683 684 7.383687 TGAACAAGGTCTTAGTATGTACCAAG 58.616 38.462 0.00 0.00 34.29 3.61
684 685 7.233962 TGAACAAGGTCTTAGTATGTACCAAGA 59.766 37.037 0.00 0.00 32.82 3.02
685 686 7.735326 ACAAGGTCTTAGTATGTACCAAGAT 57.265 36.000 4.75 0.00 36.59 2.40
726 727 9.524106 TGGTTGTATAATAAGTACACGAATCAG 57.476 33.333 0.00 0.00 32.18 2.90
739 740 3.268103 AATCAGCGTGGGGGTGGAC 62.268 63.158 0.00 0.00 44.29 4.02
746 747 2.120940 TGGGGGTGGACGAAGCTA 59.879 61.111 0.00 0.00 0.00 3.32
756 757 2.093128 TGGACGAAGCTAATTTCCTCCC 60.093 50.000 0.00 0.00 33.75 4.30
757 758 2.170817 GGACGAAGCTAATTTCCTCCCT 59.829 50.000 0.00 0.00 30.57 4.20
758 759 3.370633 GGACGAAGCTAATTTCCTCCCTT 60.371 47.826 0.00 0.00 30.57 3.95
759 760 4.262617 GACGAAGCTAATTTCCTCCCTTT 58.737 43.478 0.00 0.00 0.00 3.11
760 761 4.262617 ACGAAGCTAATTTCCTCCCTTTC 58.737 43.478 0.00 0.00 0.00 2.62
770 771 3.976701 CTCCCTTTCCGCGTGGCAT 62.977 63.158 11.05 0.00 34.14 4.40
845 846 0.401738 TTCCAAGACAGGAGCAAGGG 59.598 55.000 0.00 0.00 39.25 3.95
850 851 3.927481 GACAGGAGCAAGGGCCACC 62.927 68.421 6.18 0.66 42.56 4.61
864 865 1.694696 GGCCACCAGCTAGCTATTACT 59.305 52.381 18.86 0.00 43.05 2.24
976 978 0.606401 CGGCCAATCACCTTCACAGT 60.606 55.000 2.24 0.00 0.00 3.55
985 987 2.489722 TCACCTTCACAGTCAGAGATCG 59.510 50.000 0.00 0.00 0.00 3.69
987 989 1.543614 CTTCACAGTCAGAGATCGCG 58.456 55.000 0.00 0.00 0.00 5.87
989 991 0.960861 TCACAGTCAGAGATCGCGGT 60.961 55.000 6.13 0.00 0.00 5.68
1100 1102 3.681835 GACGGTGGAGCACGAGGT 61.682 66.667 0.00 0.00 34.83 3.85
1239 1241 3.953775 CACGGCCTCAAGGTGGGT 61.954 66.667 0.00 0.00 37.57 4.51
1393 1395 1.082117 CACCCTCGCACGTTACATCC 61.082 60.000 0.00 0.00 0.00 3.51
1487 1501 0.606401 GTGCAGGTGGCTGTGTGTAT 60.606 55.000 0.00 0.00 45.15 2.29
1504 1518 3.055602 GTGTATAAGGGGTTCAACCGAGT 60.056 47.826 0.00 0.00 39.83 4.18
1623 1637 4.440525 CGGTTTTCCTGCTCGGTAAGTATA 60.441 45.833 0.00 0.00 37.95 1.47
1677 1691 0.175073 CGCCCTAGCTAACGGTCTTT 59.825 55.000 8.05 0.00 36.60 2.52
1994 2037 2.643232 GCGTGGGGGACTACTTCGT 61.643 63.158 0.00 0.00 40.14 3.85
2641 2693 2.744202 GACGAGGAAGCACATTGAACAT 59.256 45.455 0.00 0.00 0.00 2.71
3244 3310 1.380302 GGGAGCTCAGGGCAGAAAA 59.620 57.895 17.19 0.00 44.79 2.29
3439 3991 1.392589 CTCCTGTGCACCAAAACACT 58.607 50.000 15.69 0.00 37.68 3.55
3455 4007 3.926058 ACACTGTCCTTGTAACCTTGT 57.074 42.857 0.00 0.00 0.00 3.16
3457 4009 5.362105 ACACTGTCCTTGTAACCTTGTAA 57.638 39.130 0.00 0.00 0.00 2.41
3563 4115 6.924111 ACAAAGGTGCATCGAGAAATAAATT 58.076 32.000 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.973460 TTCTTATTGAAACCCCCGTAAAAA 57.027 33.333 0.00 0.00 0.00 1.94
24 25 6.973460 TTTCTTATTGAAACCCCCGTAAAA 57.027 33.333 0.00 0.00 39.50 1.52
25 26 6.973460 TTTTCTTATTGAAACCCCCGTAAA 57.027 33.333 0.00 0.00 43.55 2.01
26 27 6.720288 TCATTTTCTTATTGAAACCCCCGTAA 59.280 34.615 0.00 0.00 43.55 3.18
27 28 6.151480 GTCATTTTCTTATTGAAACCCCCGTA 59.849 38.462 0.00 0.00 43.55 4.02
28 29 5.047590 GTCATTTTCTTATTGAAACCCCCGT 60.048 40.000 0.00 0.00 43.55 5.28
29 30 5.047660 TGTCATTTTCTTATTGAAACCCCCG 60.048 40.000 0.00 0.00 43.55 5.73
30 31 6.210584 TCTGTCATTTTCTTATTGAAACCCCC 59.789 38.462 0.00 0.00 43.55 5.40
31 32 7.227049 TCTGTCATTTTCTTATTGAAACCCC 57.773 36.000 0.00 0.00 43.55 4.95
32 33 9.710900 AAATCTGTCATTTTCTTATTGAAACCC 57.289 29.630 0.00 0.00 43.55 4.11
42 43 8.507249 CGAACTCCTTAAATCTGTCATTTTCTT 58.493 33.333 0.00 0.00 0.00 2.52
43 44 7.119846 CCGAACTCCTTAAATCTGTCATTTTCT 59.880 37.037 0.00 0.00 0.00 2.52
44 45 7.094762 ACCGAACTCCTTAAATCTGTCATTTTC 60.095 37.037 0.00 0.00 0.00 2.29
45 46 6.715264 ACCGAACTCCTTAAATCTGTCATTTT 59.285 34.615 0.00 0.00 0.00 1.82
46 47 6.238648 ACCGAACTCCTTAAATCTGTCATTT 58.761 36.000 0.00 0.00 0.00 2.32
47 48 5.805728 ACCGAACTCCTTAAATCTGTCATT 58.194 37.500 0.00 0.00 0.00 2.57
48 49 5.420409 GACCGAACTCCTTAAATCTGTCAT 58.580 41.667 0.00 0.00 0.00 3.06
49 50 4.617530 CGACCGAACTCCTTAAATCTGTCA 60.618 45.833 0.00 0.00 0.00 3.58
50 51 3.858238 CGACCGAACTCCTTAAATCTGTC 59.142 47.826 0.00 0.00 0.00 3.51
51 52 3.257624 ACGACCGAACTCCTTAAATCTGT 59.742 43.478 0.00 0.00 0.00 3.41
52 53 3.846360 ACGACCGAACTCCTTAAATCTG 58.154 45.455 0.00 0.00 0.00 2.90
53 54 5.649782 TTACGACCGAACTCCTTAAATCT 57.350 39.130 0.00 0.00 0.00 2.40
54 55 6.532657 TGATTTACGACCGAACTCCTTAAATC 59.467 38.462 0.00 0.00 34.10 2.17
55 56 6.400568 TGATTTACGACCGAACTCCTTAAAT 58.599 36.000 0.00 0.00 0.00 1.40
56 57 5.782047 TGATTTACGACCGAACTCCTTAAA 58.218 37.500 0.00 0.00 0.00 1.52
57 58 5.047802 ACTGATTTACGACCGAACTCCTTAA 60.048 40.000 0.00 0.00 0.00 1.85
58 59 4.460382 ACTGATTTACGACCGAACTCCTTA 59.540 41.667 0.00 0.00 0.00 2.69
59 60 3.257624 ACTGATTTACGACCGAACTCCTT 59.742 43.478 0.00 0.00 0.00 3.36
60 61 2.824341 ACTGATTTACGACCGAACTCCT 59.176 45.455 0.00 0.00 0.00 3.69
61 62 3.227810 ACTGATTTACGACCGAACTCC 57.772 47.619 0.00 0.00 0.00 3.85
62 63 4.979388 ACTACTGATTTACGACCGAACTC 58.021 43.478 0.00 0.00 0.00 3.01
63 64 5.048504 TGAACTACTGATTTACGACCGAACT 60.049 40.000 0.00 0.00 0.00 3.01
64 65 5.156355 TGAACTACTGATTTACGACCGAAC 58.844 41.667 0.00 0.00 0.00 3.95
65 66 5.375417 TGAACTACTGATTTACGACCGAA 57.625 39.130 0.00 0.00 0.00 4.30
66 67 5.375417 TTGAACTACTGATTTACGACCGA 57.625 39.130 0.00 0.00 0.00 4.69
67 68 6.074195 TGTTTTGAACTACTGATTTACGACCG 60.074 38.462 0.00 0.00 0.00 4.79
68 69 7.181143 TGTTTTGAACTACTGATTTACGACC 57.819 36.000 0.00 0.00 0.00 4.79
69 70 7.268447 GCATGTTTTGAACTACTGATTTACGAC 59.732 37.037 0.00 0.00 0.00 4.34
70 71 7.295201 GCATGTTTTGAACTACTGATTTACGA 58.705 34.615 0.00 0.00 0.00 3.43
71 72 6.246332 CGCATGTTTTGAACTACTGATTTACG 59.754 38.462 0.00 0.00 0.00 3.18
72 73 7.268447 GTCGCATGTTTTGAACTACTGATTTAC 59.732 37.037 0.00 0.00 0.00 2.01
73 74 7.295201 GTCGCATGTTTTGAACTACTGATTTA 58.705 34.615 0.00 0.00 0.00 1.40
74 75 6.142817 GTCGCATGTTTTGAACTACTGATTT 58.857 36.000 0.00 0.00 0.00 2.17
75 76 5.614668 CGTCGCATGTTTTGAACTACTGATT 60.615 40.000 0.00 0.00 0.00 2.57
76 77 4.143115 CGTCGCATGTTTTGAACTACTGAT 60.143 41.667 0.00 0.00 0.00 2.90
77 78 3.183574 CGTCGCATGTTTTGAACTACTGA 59.816 43.478 0.00 0.00 0.00 3.41
78 79 3.183574 TCGTCGCATGTTTTGAACTACTG 59.816 43.478 0.00 0.00 0.00 2.74
79 80 3.386486 TCGTCGCATGTTTTGAACTACT 58.614 40.909 0.00 0.00 0.00 2.57
80 81 3.781341 TCGTCGCATGTTTTGAACTAC 57.219 42.857 0.00 0.00 0.00 2.73
81 82 4.797693 TTTCGTCGCATGTTTTGAACTA 57.202 36.364 0.00 0.00 0.00 2.24
82 83 3.684103 TTTCGTCGCATGTTTTGAACT 57.316 38.095 0.00 0.00 0.00 3.01
83 84 4.947077 AATTTCGTCGCATGTTTTGAAC 57.053 36.364 0.00 0.00 0.00 3.18
84 85 7.451281 TTTTAATTTCGTCGCATGTTTTGAA 57.549 28.000 0.00 0.00 0.00 2.69
85 86 7.630470 ATTTTAATTTCGTCGCATGTTTTGA 57.370 28.000 0.00 0.00 0.00 2.69
86 87 7.890717 GGTATTTTAATTTCGTCGCATGTTTTG 59.109 33.333 0.00 0.00 0.00 2.44
87 88 7.062488 GGGTATTTTAATTTCGTCGCATGTTTT 59.938 33.333 0.00 0.00 0.00 2.43
88 89 6.528774 GGGTATTTTAATTTCGTCGCATGTTT 59.471 34.615 0.00 0.00 0.00 2.83
89 90 6.031471 GGGTATTTTAATTTCGTCGCATGTT 58.969 36.000 0.00 0.00 0.00 2.71
90 91 5.449451 GGGGTATTTTAATTTCGTCGCATGT 60.449 40.000 0.00 0.00 0.00 3.21
91 92 4.973663 GGGGTATTTTAATTTCGTCGCATG 59.026 41.667 0.00 0.00 0.00 4.06
92 93 4.641094 TGGGGTATTTTAATTTCGTCGCAT 59.359 37.500 0.00 0.00 0.00 4.73
93 94 4.008330 TGGGGTATTTTAATTTCGTCGCA 58.992 39.130 0.00 0.00 0.00 5.10
94 95 4.095334 AGTGGGGTATTTTAATTTCGTCGC 59.905 41.667 0.00 0.00 0.00 5.19
95 96 5.806366 AGTGGGGTATTTTAATTTCGTCG 57.194 39.130 0.00 0.00 0.00 5.12
96 97 7.121020 TGGTAAGTGGGGTATTTTAATTTCGTC 59.879 37.037 0.00 0.00 0.00 4.20
97 98 6.947158 TGGTAAGTGGGGTATTTTAATTTCGT 59.053 34.615 0.00 0.00 0.00 3.85
98 99 7.393841 TGGTAAGTGGGGTATTTTAATTTCG 57.606 36.000 0.00 0.00 0.00 3.46
101 102 9.952030 CAATTTGGTAAGTGGGGTATTTTAATT 57.048 29.630 0.00 0.00 0.00 1.40
102 103 9.327731 TCAATTTGGTAAGTGGGGTATTTTAAT 57.672 29.630 0.00 0.00 30.58 1.40
103 104 8.722622 TCAATTTGGTAAGTGGGGTATTTTAA 57.277 30.769 0.00 0.00 30.58 1.52
104 105 8.722622 TTCAATTTGGTAAGTGGGGTATTTTA 57.277 30.769 0.00 0.00 30.58 1.52
105 106 7.619512 TTCAATTTGGTAAGTGGGGTATTTT 57.380 32.000 0.00 0.00 30.58 1.82
106 107 7.806680 ATTCAATTTGGTAAGTGGGGTATTT 57.193 32.000 0.00 0.00 30.58 1.40
107 108 7.896496 TGTATTCAATTTGGTAAGTGGGGTATT 59.104 33.333 0.00 0.00 30.58 1.89
108 109 7.415086 TGTATTCAATTTGGTAAGTGGGGTAT 58.585 34.615 0.00 0.00 30.58 2.73
109 110 6.791371 TGTATTCAATTTGGTAAGTGGGGTA 58.209 36.000 0.00 0.00 30.58 3.69
110 111 5.646215 TGTATTCAATTTGGTAAGTGGGGT 58.354 37.500 0.00 0.00 30.58 4.95
111 112 6.154363 ACATGTATTCAATTTGGTAAGTGGGG 59.846 38.462 0.00 0.00 30.58 4.96
112 113 7.169158 ACATGTATTCAATTTGGTAAGTGGG 57.831 36.000 0.00 0.00 30.58 4.61
113 114 8.303156 TCAACATGTATTCAATTTGGTAAGTGG 58.697 33.333 0.00 0.00 30.58 4.00
114 115 9.345517 CTCAACATGTATTCAATTTGGTAAGTG 57.654 33.333 0.00 0.00 0.00 3.16
115 116 8.028938 GCTCAACATGTATTCAATTTGGTAAGT 58.971 33.333 0.00 0.00 0.00 2.24
116 117 8.028354 TGCTCAACATGTATTCAATTTGGTAAG 58.972 33.333 0.00 0.00 0.00 2.34
117 118 7.890515 TGCTCAACATGTATTCAATTTGGTAA 58.109 30.769 0.00 0.00 0.00 2.85
118 119 7.459795 TGCTCAACATGTATTCAATTTGGTA 57.540 32.000 0.00 0.00 0.00 3.25
119 120 6.343716 TGCTCAACATGTATTCAATTTGGT 57.656 33.333 0.00 0.00 0.00 3.67
133 134 4.033709 AGGGAGTACTACATGCTCAACAT 58.966 43.478 7.57 0.00 41.61 2.71
134 135 3.441101 AGGGAGTACTACATGCTCAACA 58.559 45.455 7.57 0.00 41.61 3.33
135 136 4.081642 TGAAGGGAGTACTACATGCTCAAC 60.082 45.833 7.57 0.00 41.61 3.18
136 137 4.093743 TGAAGGGAGTACTACATGCTCAA 58.906 43.478 7.57 0.00 41.61 3.02
137 138 3.708451 TGAAGGGAGTACTACATGCTCA 58.292 45.455 7.57 0.00 41.61 4.26
138 139 4.946478 ATGAAGGGAGTACTACATGCTC 57.054 45.455 7.57 0.00 39.23 4.26
139 140 5.700402 AAATGAAGGGAGTACTACATGCT 57.300 39.130 7.57 0.00 0.00 3.79
140 141 6.759497 AAAAATGAAGGGAGTACTACATGC 57.241 37.500 7.57 0.00 0.00 4.06
146 147 9.682465 GGACTAAATAAAAATGAAGGGAGTACT 57.318 33.333 0.00 0.00 0.00 2.73
147 148 8.610035 CGGACTAAATAAAAATGAAGGGAGTAC 58.390 37.037 0.00 0.00 0.00 2.73
148 149 8.323567 ACGGACTAAATAAAAATGAAGGGAGTA 58.676 33.333 0.00 0.00 0.00 2.59
149 150 7.173032 ACGGACTAAATAAAAATGAAGGGAGT 58.827 34.615 0.00 0.00 0.00 3.85
150 151 7.625828 ACGGACTAAATAAAAATGAAGGGAG 57.374 36.000 0.00 0.00 0.00 4.30
170 171 9.485206 GGACTTTTATCAAAGCTAATATACGGA 57.515 33.333 0.00 0.00 43.03 4.69
171 172 9.268268 TGGACTTTTATCAAAGCTAATATACGG 57.732 33.333 0.00 0.00 43.03 4.02
175 176 8.986929 AGCTGGACTTTTATCAAAGCTAATAT 57.013 30.769 0.00 0.00 43.03 1.28
176 177 8.807948 AAGCTGGACTTTTATCAAAGCTAATA 57.192 30.769 0.00 0.00 43.03 0.98
177 178 7.709149 AAGCTGGACTTTTATCAAAGCTAAT 57.291 32.000 0.00 0.00 43.03 1.73
178 179 7.524717 AAAGCTGGACTTTTATCAAAGCTAA 57.475 32.000 0.00 0.00 46.73 3.09
179 180 7.663905 TGTAAAGCTGGACTTTTATCAAAGCTA 59.336 33.333 0.00 0.00 46.73 3.32
180 181 6.490040 TGTAAAGCTGGACTTTTATCAAAGCT 59.510 34.615 0.00 0.00 46.73 3.74
181 182 6.677913 TGTAAAGCTGGACTTTTATCAAAGC 58.322 36.000 0.00 0.00 46.73 3.51
182 183 8.968242 GTTTGTAAAGCTGGACTTTTATCAAAG 58.032 33.333 0.00 0.00 46.73 2.77
183 184 8.691797 AGTTTGTAAAGCTGGACTTTTATCAAA 58.308 29.630 0.00 4.57 46.73 2.69
184 185 8.232913 AGTTTGTAAAGCTGGACTTTTATCAA 57.767 30.769 0.00 0.00 46.73 2.57
185 186 7.817418 AGTTTGTAAAGCTGGACTTTTATCA 57.183 32.000 0.00 0.00 46.73 2.15
186 187 8.968242 CAAAGTTTGTAAAGCTGGACTTTTATC 58.032 33.333 7.48 0.00 46.73 1.75
187 188 8.691797 TCAAAGTTTGTAAAGCTGGACTTTTAT 58.308 29.630 15.08 0.00 46.73 1.40
188 189 7.971722 GTCAAAGTTTGTAAAGCTGGACTTTTA 59.028 33.333 15.08 0.00 46.73 1.52
189 190 6.811665 GTCAAAGTTTGTAAAGCTGGACTTTT 59.188 34.615 15.08 0.00 46.73 2.27
191 192 5.163550 GGTCAAAGTTTGTAAAGCTGGACTT 60.164 40.000 15.08 0.00 40.02 3.01
192 193 4.338400 GGTCAAAGTTTGTAAAGCTGGACT 59.662 41.667 15.08 0.00 40.02 3.85
193 194 4.097286 TGGTCAAAGTTTGTAAAGCTGGAC 59.903 41.667 15.08 3.05 35.87 4.02
194 195 4.274147 TGGTCAAAGTTTGTAAAGCTGGA 58.726 39.130 15.08 0.00 35.87 3.86
195 196 4.647424 TGGTCAAAGTTTGTAAAGCTGG 57.353 40.909 15.08 0.00 35.87 4.85
281 282 9.905713 ACAAACCTATATGATGTGAAAGTACAT 57.094 29.630 0.00 0.00 43.61 2.29
282 283 9.733556 AACAAACCTATATGATGTGAAAGTACA 57.266 29.630 0.00 0.00 34.63 2.90
359 360 9.719355 TGCATATTAGAGTTGACTGAAGTTAAA 57.281 29.630 0.00 0.00 0.00 1.52
360 361 9.371136 CTGCATATTAGAGTTGACTGAAGTTAA 57.629 33.333 0.00 0.00 0.00 2.01
361 362 8.749354 TCTGCATATTAGAGTTGACTGAAGTTA 58.251 33.333 0.00 0.00 0.00 2.24
362 363 7.615403 TCTGCATATTAGAGTTGACTGAAGTT 58.385 34.615 0.00 0.00 0.00 2.66
363 364 7.175347 TCTGCATATTAGAGTTGACTGAAGT 57.825 36.000 0.00 0.00 0.00 3.01
364 365 7.697352 CTCTGCATATTAGAGTTGACTGAAG 57.303 40.000 5.84 0.00 37.48 3.02
374 375 9.478019 CGTTTTTGTTTACTCTGCATATTAGAG 57.522 33.333 10.74 10.74 45.59 2.43
375 376 9.210329 TCGTTTTTGTTTACTCTGCATATTAGA 57.790 29.630 0.00 0.00 0.00 2.10
376 377 9.820229 TTCGTTTTTGTTTACTCTGCATATTAG 57.180 29.630 0.00 0.00 0.00 1.73
377 378 9.820229 CTTCGTTTTTGTTTACTCTGCATATTA 57.180 29.630 0.00 0.00 0.00 0.98
378 379 7.807907 CCTTCGTTTTTGTTTACTCTGCATATT 59.192 33.333 0.00 0.00 0.00 1.28
379 380 7.305474 CCTTCGTTTTTGTTTACTCTGCATAT 58.695 34.615 0.00 0.00 0.00 1.78
380 381 6.293735 CCCTTCGTTTTTGTTTACTCTGCATA 60.294 38.462 0.00 0.00 0.00 3.14
381 382 5.507315 CCCTTCGTTTTTGTTTACTCTGCAT 60.507 40.000 0.00 0.00 0.00 3.96
382 383 4.201970 CCCTTCGTTTTTGTTTACTCTGCA 60.202 41.667 0.00 0.00 0.00 4.41
383 384 4.035909 TCCCTTCGTTTTTGTTTACTCTGC 59.964 41.667 0.00 0.00 0.00 4.26
384 385 5.296035 ACTCCCTTCGTTTTTGTTTACTCTG 59.704 40.000 0.00 0.00 0.00 3.35
385 386 5.434408 ACTCCCTTCGTTTTTGTTTACTCT 58.566 37.500 0.00 0.00 0.00 3.24
386 387 5.746307 ACTCCCTTCGTTTTTGTTTACTC 57.254 39.130 0.00 0.00 0.00 2.59
387 388 6.259387 CAGTACTCCCTTCGTTTTTGTTTACT 59.741 38.462 0.00 0.00 0.00 2.24
388 389 6.258507 TCAGTACTCCCTTCGTTTTTGTTTAC 59.741 38.462 0.00 0.00 0.00 2.01
389 390 6.347696 TCAGTACTCCCTTCGTTTTTGTTTA 58.652 36.000 0.00 0.00 0.00 2.01
390 391 5.187687 TCAGTACTCCCTTCGTTTTTGTTT 58.812 37.500 0.00 0.00 0.00 2.83
391 392 4.773013 TCAGTACTCCCTTCGTTTTTGTT 58.227 39.130 0.00 0.00 0.00 2.83
392 393 4.411256 TCAGTACTCCCTTCGTTTTTGT 57.589 40.909 0.00 0.00 0.00 2.83
393 394 4.573201 TGTTCAGTACTCCCTTCGTTTTTG 59.427 41.667 0.00 0.00 0.00 2.44
394 395 4.573607 GTGTTCAGTACTCCCTTCGTTTTT 59.426 41.667 0.00 0.00 0.00 1.94
395 396 4.124970 GTGTTCAGTACTCCCTTCGTTTT 58.875 43.478 0.00 0.00 0.00 2.43
396 397 3.133362 TGTGTTCAGTACTCCCTTCGTTT 59.867 43.478 0.00 0.00 0.00 3.60
397 398 2.696707 TGTGTTCAGTACTCCCTTCGTT 59.303 45.455 0.00 0.00 0.00 3.85
398 399 2.313317 TGTGTTCAGTACTCCCTTCGT 58.687 47.619 0.00 0.00 0.00 3.85
399 400 3.005472 TCTTGTGTTCAGTACTCCCTTCG 59.995 47.826 0.00 0.00 0.00 3.79
400 401 4.602340 TCTTGTGTTCAGTACTCCCTTC 57.398 45.455 0.00 0.00 0.00 3.46
401 402 6.681729 TTATCTTGTGTTCAGTACTCCCTT 57.318 37.500 0.00 0.00 0.00 3.95
402 403 6.681729 TTTATCTTGTGTTCAGTACTCCCT 57.318 37.500 0.00 0.00 0.00 4.20
403 404 7.103641 TCATTTATCTTGTGTTCAGTACTCCC 58.896 38.462 0.00 0.00 0.00 4.30
404 405 8.547967 TTCATTTATCTTGTGTTCAGTACTCC 57.452 34.615 0.00 0.00 0.00 3.85
405 406 8.171840 GCTTCATTTATCTTGTGTTCAGTACTC 58.828 37.037 0.00 0.00 0.00 2.59
406 407 7.880195 AGCTTCATTTATCTTGTGTTCAGTACT 59.120 33.333 0.00 0.00 0.00 2.73
407 408 8.034058 AGCTTCATTTATCTTGTGTTCAGTAC 57.966 34.615 0.00 0.00 0.00 2.73
408 409 9.890629 ATAGCTTCATTTATCTTGTGTTCAGTA 57.109 29.630 0.00 0.00 0.00 2.74
409 410 8.798859 ATAGCTTCATTTATCTTGTGTTCAGT 57.201 30.769 0.00 0.00 0.00 3.41
414 415 9.461312 TGGTTAATAGCTTCATTTATCTTGTGT 57.539 29.630 0.00 0.00 0.00 3.72
421 422 9.082313 CCAGGAATGGTTAATAGCTTCATTTAT 57.918 33.333 0.00 0.00 0.00 1.40
422 423 7.505585 CCCAGGAATGGTTAATAGCTTCATTTA 59.494 37.037 0.00 0.00 0.00 1.40
423 424 6.324770 CCCAGGAATGGTTAATAGCTTCATTT 59.675 38.462 0.00 0.00 0.00 2.32
424 425 5.835280 CCCAGGAATGGTTAATAGCTTCATT 59.165 40.000 0.00 0.00 0.00 2.57
425 426 5.103515 ACCCAGGAATGGTTAATAGCTTCAT 60.104 40.000 0.00 0.00 29.75 2.57
426 427 4.229582 ACCCAGGAATGGTTAATAGCTTCA 59.770 41.667 0.00 0.00 29.75 3.02
427 428 4.580580 CACCCAGGAATGGTTAATAGCTTC 59.419 45.833 0.00 0.00 32.46 3.86
428 429 4.536765 CACCCAGGAATGGTTAATAGCTT 58.463 43.478 0.00 0.00 32.46 3.74
429 430 3.688414 GCACCCAGGAATGGTTAATAGCT 60.688 47.826 0.00 0.00 32.46 3.32
430 431 2.623416 GCACCCAGGAATGGTTAATAGC 59.377 50.000 0.00 0.00 32.46 2.97
431 432 3.117512 AGGCACCCAGGAATGGTTAATAG 60.118 47.826 0.00 0.00 32.46 1.73
432 433 2.856231 AGGCACCCAGGAATGGTTAATA 59.144 45.455 0.00 0.00 32.46 0.98
433 434 1.645919 AGGCACCCAGGAATGGTTAAT 59.354 47.619 0.00 0.00 32.46 1.40
434 435 1.080638 AGGCACCCAGGAATGGTTAA 58.919 50.000 0.00 0.00 32.46 2.01
435 436 1.080638 AAGGCACCCAGGAATGGTTA 58.919 50.000 0.00 0.00 32.46 2.85
436 437 0.542702 CAAGGCACCCAGGAATGGTT 60.543 55.000 0.00 0.00 32.46 3.67
437 438 1.077265 CAAGGCACCCAGGAATGGT 59.923 57.895 0.00 0.00 36.21 3.55
438 439 0.967380 GTCAAGGCACCCAGGAATGG 60.967 60.000 0.00 0.00 0.00 3.16
439 440 0.038744 AGTCAAGGCACCCAGGAATG 59.961 55.000 0.00 0.00 0.00 2.67
440 441 0.038744 CAGTCAAGGCACCCAGGAAT 59.961 55.000 0.00 0.00 0.00 3.01
441 442 1.455849 CAGTCAAGGCACCCAGGAA 59.544 57.895 0.00 0.00 0.00 3.36
442 443 3.160585 CAGTCAAGGCACCCAGGA 58.839 61.111 0.00 0.00 0.00 3.86
443 444 2.674380 GCAGTCAAGGCACCCAGG 60.674 66.667 0.00 0.00 0.00 4.45
444 445 1.970114 CAGCAGTCAAGGCACCCAG 60.970 63.158 0.00 0.00 0.00 4.45
445 446 2.113774 CAGCAGTCAAGGCACCCA 59.886 61.111 0.00 0.00 0.00 4.51
446 447 2.674380 CCAGCAGTCAAGGCACCC 60.674 66.667 0.00 0.00 0.00 4.61
447 448 2.674380 CCCAGCAGTCAAGGCACC 60.674 66.667 0.00 0.00 0.00 5.01
448 449 1.673665 CTCCCAGCAGTCAAGGCAC 60.674 63.158 0.00 0.00 0.00 5.01
449 450 2.752358 CTCCCAGCAGTCAAGGCA 59.248 61.111 0.00 0.00 0.00 4.75
450 451 2.045536 CCTCCCAGCAGTCAAGGC 60.046 66.667 0.00 0.00 0.00 4.35
451 452 2.045536 GCCTCCCAGCAGTCAAGG 60.046 66.667 0.00 0.00 0.00 3.61
452 453 2.752358 TGCCTCCCAGCAGTCAAG 59.248 61.111 0.00 0.00 38.00 3.02
459 460 0.179018 ATCCGTAAATGCCTCCCAGC 60.179 55.000 0.00 0.00 0.00 4.85
460 461 1.140852 TCATCCGTAAATGCCTCCCAG 59.859 52.381 0.00 0.00 0.00 4.45
461 462 1.140852 CTCATCCGTAAATGCCTCCCA 59.859 52.381 0.00 0.00 0.00 4.37
462 463 1.141053 ACTCATCCGTAAATGCCTCCC 59.859 52.381 0.00 0.00 0.00 4.30
463 464 2.158957 TCACTCATCCGTAAATGCCTCC 60.159 50.000 0.00 0.00 0.00 4.30
464 465 3.179443 TCACTCATCCGTAAATGCCTC 57.821 47.619 0.00 0.00 0.00 4.70
465 466 3.845781 ATCACTCATCCGTAAATGCCT 57.154 42.857 0.00 0.00 0.00 4.75
466 467 6.560253 ATTAATCACTCATCCGTAAATGCC 57.440 37.500 0.00 0.00 0.00 4.40
467 468 6.360681 GCAATTAATCACTCATCCGTAAATGC 59.639 38.462 0.00 0.00 0.00 3.56
468 469 6.857964 GGCAATTAATCACTCATCCGTAAATG 59.142 38.462 0.00 0.00 0.00 2.32
469 470 6.545666 TGGCAATTAATCACTCATCCGTAAAT 59.454 34.615 0.00 0.00 0.00 1.40
470 471 5.883115 TGGCAATTAATCACTCATCCGTAAA 59.117 36.000 0.00 0.00 0.00 2.01
471 472 5.432645 TGGCAATTAATCACTCATCCGTAA 58.567 37.500 0.00 0.00 0.00 3.18
472 473 5.029807 TGGCAATTAATCACTCATCCGTA 57.970 39.130 0.00 0.00 0.00 4.02
473 474 3.879295 CTGGCAATTAATCACTCATCCGT 59.121 43.478 0.00 0.00 0.00 4.69
474 475 3.879295 ACTGGCAATTAATCACTCATCCG 59.121 43.478 0.00 0.00 0.00 4.18
475 476 4.024556 CGACTGGCAATTAATCACTCATCC 60.025 45.833 0.00 0.00 0.00 3.51
476 477 4.024556 CCGACTGGCAATTAATCACTCATC 60.025 45.833 0.00 0.00 0.00 2.92
477 478 3.879295 CCGACTGGCAATTAATCACTCAT 59.121 43.478 0.00 0.00 0.00 2.90
478 479 3.270027 CCGACTGGCAATTAATCACTCA 58.730 45.455 0.00 0.00 0.00 3.41
479 480 2.614057 CCCGACTGGCAATTAATCACTC 59.386 50.000 0.00 0.00 0.00 3.51
480 481 2.643551 CCCGACTGGCAATTAATCACT 58.356 47.619 0.00 0.00 0.00 3.41
494 495 0.036164 TTGCATACAACAGCCCGACT 59.964 50.000 0.00 0.00 0.00 4.18
495 496 2.550487 TTGCATACAACAGCCCGAC 58.450 52.632 0.00 0.00 0.00 4.79
504 505 1.963855 ACGCGCCAGTTGCATACAA 60.964 52.632 5.73 0.00 41.33 2.41
505 506 2.358125 ACGCGCCAGTTGCATACA 60.358 55.556 5.73 0.00 41.33 2.29
506 507 2.098298 CACGCGCCAGTTGCATAC 59.902 61.111 5.73 0.00 41.33 2.39
507 508 3.124270 CCACGCGCCAGTTGCATA 61.124 61.111 5.73 0.00 41.33 3.14
511 512 4.988598 AGTCCCACGCGCCAGTTG 62.989 66.667 5.73 0.00 0.00 3.16
512 513 4.250305 AAGTCCCACGCGCCAGTT 62.250 61.111 5.73 0.00 0.00 3.16
513 514 4.988598 CAAGTCCCACGCGCCAGT 62.989 66.667 5.73 0.00 0.00 4.00
514 515 3.583276 TACAAGTCCCACGCGCCAG 62.583 63.158 5.73 0.00 0.00 4.85
515 516 3.583276 CTACAAGTCCCACGCGCCA 62.583 63.158 5.73 0.00 0.00 5.69
516 517 2.813908 CTACAAGTCCCACGCGCC 60.814 66.667 5.73 0.00 0.00 6.53
517 518 3.488090 GCTACAAGTCCCACGCGC 61.488 66.667 5.73 0.00 0.00 6.86
518 519 2.094659 CAGCTACAAGTCCCACGCG 61.095 63.158 3.53 3.53 0.00 6.01
519 520 2.391389 GCAGCTACAAGTCCCACGC 61.391 63.158 0.00 0.00 0.00 5.34
520 521 1.741770 GGCAGCTACAAGTCCCACG 60.742 63.158 0.00 0.00 0.00 4.94
521 522 1.377333 GGGCAGCTACAAGTCCCAC 60.377 63.158 0.00 0.00 36.96 4.61
522 523 0.252513 TAGGGCAGCTACAAGTCCCA 60.253 55.000 0.00 0.00 39.42 4.37
523 524 0.909623 TTAGGGCAGCTACAAGTCCC 59.090 55.000 0.00 0.00 37.24 4.46
524 525 3.134081 TGTATTAGGGCAGCTACAAGTCC 59.866 47.826 0.00 0.00 0.00 3.85
525 526 4.402056 TGTATTAGGGCAGCTACAAGTC 57.598 45.455 0.00 0.00 0.00 3.01
526 527 4.837093 TTGTATTAGGGCAGCTACAAGT 57.163 40.909 1.08 0.00 32.10 3.16
527 528 5.294552 GTCTTTGTATTAGGGCAGCTACAAG 59.705 44.000 4.81 1.70 35.98 3.16
528 529 5.045869 AGTCTTTGTATTAGGGCAGCTACAA 60.046 40.000 1.08 1.08 33.51 2.41
529 530 4.469945 AGTCTTTGTATTAGGGCAGCTACA 59.530 41.667 0.00 0.00 0.00 2.74
530 531 5.024785 AGTCTTTGTATTAGGGCAGCTAC 57.975 43.478 0.00 0.00 0.00 3.58
531 532 6.996180 ATAGTCTTTGTATTAGGGCAGCTA 57.004 37.500 0.00 0.00 0.00 3.32
532 533 5.896073 ATAGTCTTTGTATTAGGGCAGCT 57.104 39.130 0.00 0.00 0.00 4.24
533 534 5.634020 CGTATAGTCTTTGTATTAGGGCAGC 59.366 44.000 0.00 0.00 0.00 5.25
534 535 5.634020 GCGTATAGTCTTTGTATTAGGGCAG 59.366 44.000 0.00 0.00 0.00 4.85
535 536 5.303589 AGCGTATAGTCTTTGTATTAGGGCA 59.696 40.000 0.00 0.00 0.00 5.36
536 537 5.634020 CAGCGTATAGTCTTTGTATTAGGGC 59.366 44.000 0.00 0.00 0.00 5.19
537 538 5.634020 GCAGCGTATAGTCTTTGTATTAGGG 59.366 44.000 0.00 0.00 0.00 3.53
538 539 5.342525 CGCAGCGTATAGTCTTTGTATTAGG 59.657 44.000 6.65 0.00 0.00 2.69
539 540 6.363968 CGCAGCGTATAGTCTTTGTATTAG 57.636 41.667 6.65 0.00 0.00 1.73
567 568 3.423154 GCAGCCTGGTCCGTTTCG 61.423 66.667 0.00 0.00 0.00 3.46
568 569 1.896660 TTGCAGCCTGGTCCGTTTC 60.897 57.895 0.00 0.00 0.00 2.78
569 570 2.193536 GTTGCAGCCTGGTCCGTTT 61.194 57.895 0.00 0.00 0.00 3.60
570 571 1.764571 TAGTTGCAGCCTGGTCCGTT 61.765 55.000 0.00 0.00 0.00 4.44
571 572 1.764571 TTAGTTGCAGCCTGGTCCGT 61.765 55.000 0.00 0.00 0.00 4.69
572 573 0.392998 ATTAGTTGCAGCCTGGTCCG 60.393 55.000 0.00 0.00 0.00 4.79
573 574 1.839424 AATTAGTTGCAGCCTGGTCC 58.161 50.000 0.00 0.00 0.00 4.46
574 575 3.255642 TGAAAATTAGTTGCAGCCTGGTC 59.744 43.478 0.00 0.00 0.00 4.02
575 576 3.005791 GTGAAAATTAGTTGCAGCCTGGT 59.994 43.478 0.00 0.00 0.00 4.00
576 577 3.578688 GTGAAAATTAGTTGCAGCCTGG 58.421 45.455 0.00 0.00 0.00 4.45
577 578 3.236816 CGTGAAAATTAGTTGCAGCCTG 58.763 45.455 0.00 0.00 0.00 4.85
578 579 2.228822 CCGTGAAAATTAGTTGCAGCCT 59.771 45.455 0.00 0.00 0.00 4.58
579 580 2.227865 TCCGTGAAAATTAGTTGCAGCC 59.772 45.455 0.00 0.00 0.00 4.85
580 581 3.492313 CTCCGTGAAAATTAGTTGCAGC 58.508 45.455 0.00 0.00 0.00 5.25
581 582 3.189287 AGCTCCGTGAAAATTAGTTGCAG 59.811 43.478 0.00 0.00 0.00 4.41
582 583 3.058293 CAGCTCCGTGAAAATTAGTTGCA 60.058 43.478 0.00 0.00 0.00 4.08
583 584 3.058224 ACAGCTCCGTGAAAATTAGTTGC 60.058 43.478 0.00 0.00 0.00 4.17
584 585 4.749245 ACAGCTCCGTGAAAATTAGTTG 57.251 40.909 0.00 0.00 0.00 3.16
585 586 6.870971 TTAACAGCTCCGTGAAAATTAGTT 57.129 33.333 0.00 0.00 0.00 2.24
586 587 6.870971 TTTAACAGCTCCGTGAAAATTAGT 57.129 33.333 0.00 0.00 0.00 2.24
587 588 6.581166 GGTTTTAACAGCTCCGTGAAAATTAG 59.419 38.462 3.45 0.00 32.96 1.73
588 589 6.440436 GGTTTTAACAGCTCCGTGAAAATTA 58.560 36.000 3.45 0.00 32.96 1.40
589 590 5.286438 GGTTTTAACAGCTCCGTGAAAATT 58.714 37.500 3.45 0.00 32.96 1.82
590 591 4.555906 CGGTTTTAACAGCTCCGTGAAAAT 60.556 41.667 3.45 0.00 32.96 1.82
591 592 3.242804 CGGTTTTAACAGCTCCGTGAAAA 60.243 43.478 0.00 0.00 36.99 2.29
592 593 2.288458 CGGTTTTAACAGCTCCGTGAAA 59.712 45.455 0.00 0.00 36.99 2.69
593 594 1.868498 CGGTTTTAACAGCTCCGTGAA 59.132 47.619 0.00 0.00 36.99 3.18
594 595 1.068895 TCGGTTTTAACAGCTCCGTGA 59.931 47.619 7.53 0.00 41.58 4.35
595 596 1.459592 CTCGGTTTTAACAGCTCCGTG 59.540 52.381 7.53 2.14 41.58 4.94
596 597 1.792006 CTCGGTTTTAACAGCTCCGT 58.208 50.000 7.53 0.00 41.58 4.69
597 598 0.442699 GCTCGGTTTTAACAGCTCCG 59.557 55.000 1.51 1.51 42.12 4.63
598 599 1.809684 AGCTCGGTTTTAACAGCTCC 58.190 50.000 2.60 0.00 34.36 4.70
599 600 3.898517 AAAGCTCGGTTTTAACAGCTC 57.101 42.857 7.62 0.00 37.31 4.09
600 601 4.131596 TGTAAAGCTCGGTTTTAACAGCT 58.868 39.130 0.00 2.60 39.20 4.24
601 602 4.464112 CTGTAAAGCTCGGTTTTAACAGC 58.536 43.478 9.98 0.00 0.00 4.40
602 603 4.213482 AGCTGTAAAGCTCGGTTTTAACAG 59.787 41.667 0.00 15.12 42.12 3.16
603 604 4.131596 AGCTGTAAAGCTCGGTTTTAACA 58.868 39.130 0.00 0.00 42.12 2.41
604 605 4.744136 AGCTGTAAAGCTCGGTTTTAAC 57.256 40.909 0.00 0.00 42.12 2.01
624 625 1.807573 GCTTTCTCACTCCGCGGAG 60.808 63.158 45.26 45.26 46.91 4.63
625 626 2.261671 GCTTTCTCACTCCGCGGA 59.738 61.111 29.03 29.03 0.00 5.54
626 627 3.181967 CGCTTTCTCACTCCGCGG 61.182 66.667 22.12 22.12 40.11 6.46
627 628 3.181967 CCGCTTTCTCACTCCGCG 61.182 66.667 0.00 0.00 43.08 6.46
628 629 1.807573 CTCCGCTTTCTCACTCCGC 60.808 63.158 0.00 0.00 0.00 5.54
629 630 0.734253 CACTCCGCTTTCTCACTCCG 60.734 60.000 0.00 0.00 0.00 4.63
630 631 0.390472 CCACTCCGCTTTCTCACTCC 60.390 60.000 0.00 0.00 0.00 3.85
631 632 0.603569 TCCACTCCGCTTTCTCACTC 59.396 55.000 0.00 0.00 0.00 3.51
632 633 0.605589 CTCCACTCCGCTTTCTCACT 59.394 55.000 0.00 0.00 0.00 3.41
633 634 0.603569 TCTCCACTCCGCTTTCTCAC 59.396 55.000 0.00 0.00 0.00 3.51
634 635 0.891373 CTCTCCACTCCGCTTTCTCA 59.109 55.000 0.00 0.00 0.00 3.27
635 636 1.178276 TCTCTCCACTCCGCTTTCTC 58.822 55.000 0.00 0.00 0.00 2.87
636 637 1.859302 ATCTCTCCACTCCGCTTTCT 58.141 50.000 0.00 0.00 0.00 2.52
637 638 2.167487 AGAATCTCTCCACTCCGCTTTC 59.833 50.000 0.00 0.00 0.00 2.62
638 639 2.093764 CAGAATCTCTCCACTCCGCTTT 60.094 50.000 0.00 0.00 0.00 3.51
639 640 1.480137 CAGAATCTCTCCACTCCGCTT 59.520 52.381 0.00 0.00 0.00 4.68
640 641 1.110442 CAGAATCTCTCCACTCCGCT 58.890 55.000 0.00 0.00 0.00 5.52
641 642 1.107114 TCAGAATCTCTCCACTCCGC 58.893 55.000 0.00 0.00 0.00 5.54
642 643 2.493675 TGTTCAGAATCTCTCCACTCCG 59.506 50.000 0.00 0.00 0.00 4.63
643 644 4.502962 CTTGTTCAGAATCTCTCCACTCC 58.497 47.826 0.00 0.00 0.00 3.85
644 645 4.020662 ACCTTGTTCAGAATCTCTCCACTC 60.021 45.833 0.00 0.00 0.00 3.51
645 646 3.906846 ACCTTGTTCAGAATCTCTCCACT 59.093 43.478 0.00 0.00 0.00 4.00
646 647 4.020662 AGACCTTGTTCAGAATCTCTCCAC 60.021 45.833 0.00 0.00 0.00 4.02
647 648 4.163427 AGACCTTGTTCAGAATCTCTCCA 58.837 43.478 0.00 0.00 0.00 3.86
648 649 4.817318 AGACCTTGTTCAGAATCTCTCC 57.183 45.455 0.00 0.00 0.00 3.71
649 650 6.930731 ACTAAGACCTTGTTCAGAATCTCTC 58.069 40.000 0.00 0.00 0.00 3.20
650 651 6.926630 ACTAAGACCTTGTTCAGAATCTCT 57.073 37.500 0.00 0.00 0.00 3.10
651 652 8.254508 ACATACTAAGACCTTGTTCAGAATCTC 58.745 37.037 0.00 0.00 0.00 2.75
652 653 8.140112 ACATACTAAGACCTTGTTCAGAATCT 57.860 34.615 0.00 0.00 0.00 2.40
653 654 9.303537 GTACATACTAAGACCTTGTTCAGAATC 57.696 37.037 0.00 0.00 0.00 2.52
654 655 8.258708 GGTACATACTAAGACCTTGTTCAGAAT 58.741 37.037 0.00 0.00 0.00 2.40
655 656 7.233962 TGGTACATACTAAGACCTTGTTCAGAA 59.766 37.037 0.00 0.00 32.87 3.02
656 657 6.722590 TGGTACATACTAAGACCTTGTTCAGA 59.277 38.462 0.00 0.00 32.87 3.27
657 658 6.931838 TGGTACATACTAAGACCTTGTTCAG 58.068 40.000 0.00 0.00 32.87 3.02
658 659 6.921486 TGGTACATACTAAGACCTTGTTCA 57.079 37.500 0.00 0.00 32.87 3.18
659 660 7.609056 TCTTGGTACATACTAAGACCTTGTTC 58.391 38.462 12.35 0.00 45.09 3.18
660 661 7.549147 TCTTGGTACATACTAAGACCTTGTT 57.451 36.000 12.35 0.00 45.09 2.83
675 676 9.710900 CAGCTTGTATAATGATATCTTGGTACA 57.289 33.333 3.98 7.92 0.00 2.90
676 677 9.155975 CCAGCTTGTATAATGATATCTTGGTAC 57.844 37.037 3.98 5.71 0.00 3.34
677 678 8.880244 ACCAGCTTGTATAATGATATCTTGGTA 58.120 33.333 3.98 0.00 0.00 3.25
678 679 7.749666 ACCAGCTTGTATAATGATATCTTGGT 58.250 34.615 3.98 0.00 0.00 3.67
679 680 8.509690 CAACCAGCTTGTATAATGATATCTTGG 58.490 37.037 3.98 0.00 0.00 3.61
680 681 9.060347 ACAACCAGCTTGTATAATGATATCTTG 57.940 33.333 3.98 0.00 41.63 3.02
732 733 2.014857 GGAAATTAGCTTCGTCCACCC 58.985 52.381 0.00 0.00 0.00 4.61
733 734 2.937149 GAGGAAATTAGCTTCGTCCACC 59.063 50.000 0.00 0.00 35.25 4.61
739 740 3.628032 GGAAAGGGAGGAAATTAGCTTCG 59.372 47.826 0.00 0.00 0.00 3.79
741 742 3.621558 CGGAAAGGGAGGAAATTAGCTT 58.378 45.455 0.00 0.00 0.00 3.74
746 747 0.037734 ACGCGGAAAGGGAGGAAATT 59.962 50.000 12.47 0.00 36.53 1.82
756 757 1.063006 CATGATGCCACGCGGAAAG 59.937 57.895 12.47 0.00 0.00 2.62
757 758 1.643868 GACATGATGCCACGCGGAAA 61.644 55.000 12.47 0.00 0.00 3.13
758 759 2.046411 ACATGATGCCACGCGGAA 60.046 55.556 12.47 0.00 0.00 4.30
759 760 2.511373 GACATGATGCCACGCGGA 60.511 61.111 12.47 0.00 0.00 5.54
760 761 3.576356 GGACATGATGCCACGCGG 61.576 66.667 12.47 0.00 0.00 6.46
770 771 3.334691 GAAAATGGACGAGTGGACATGA 58.665 45.455 0.00 0.00 0.00 3.07
845 846 3.477210 AAGTAATAGCTAGCTGGTGGC 57.523 47.619 27.68 12.83 42.19 5.01
850 851 6.419413 CGAGAAAGGAAAGTAATAGCTAGCTG 59.581 42.308 27.68 0.00 0.00 4.24
976 978 2.343426 ACTGCACCGCGATCTCTGA 61.343 57.895 8.23 0.00 0.00 3.27
985 987 2.393768 CCATGTCTCACTGCACCGC 61.394 63.158 0.00 0.00 0.00 5.68
987 989 0.610174 TCTCCATGTCTCACTGCACC 59.390 55.000 0.00 0.00 0.00 5.01
989 991 1.208776 CCATCTCCATGTCTCACTGCA 59.791 52.381 0.00 0.00 0.00 4.41
1119 1121 3.292159 GAAACCACCCACGCCCAC 61.292 66.667 0.00 0.00 0.00 4.61
1129 1131 2.604174 CGACCACGCAGGAAACCAC 61.604 63.158 0.93 0.00 41.22 4.16
1393 1395 4.155462 ACTGCAACATACATTCTTCTGCTG 59.845 41.667 0.00 0.00 34.59 4.41
1449 1463 1.759293 CGTGCATGCATGAGAGGTCG 61.759 60.000 31.95 19.74 35.09 4.79
1487 1501 0.604578 CGACTCGGTTGAACCCCTTA 59.395 55.000 9.08 0.00 33.75 2.69
1598 1612 0.899720 TACCGAGCAGGAAAACCGAT 59.100 50.000 5.19 0.00 45.00 4.18
1623 1637 2.027073 CATGTACAGGCACGCGTGT 61.027 57.895 36.80 21.70 45.36 4.49
1746 1789 1.138247 GGTCACGCCGTAGTCGAAT 59.862 57.895 0.00 0.00 39.71 3.34
1982 2025 0.173708 CTGCTCCACGAAGTAGTCCC 59.826 60.000 0.00 0.00 41.61 4.46
2251 2300 4.424566 GCAACCGTCGGCGAGGTA 62.425 66.667 25.50 0.00 40.37 3.08
2547 2599 2.124983 GCTGATCTGAAGCCGGCA 60.125 61.111 31.54 7.75 34.45 5.69
2641 2693 2.301583 TGCATCCGGATCCGATTAATCA 59.698 45.455 35.42 19.98 42.83 2.57
2973 3031 4.954202 TCCATAACGATGTGTAGAGTTCCT 59.046 41.667 0.00 0.00 0.00 3.36
3302 3368 2.807676 TGACATCAGTAGAGCTGTGGA 58.192 47.619 0.00 0.00 45.23 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.