Multiple sequence alignment - TraesCS2B01G419800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G419800 | chr2B | 100.000 | 2101 | 0 | 0 | 442 | 2542 | 601356033 | 601358133 | 0.000000e+00 | 3880 |
1 | TraesCS2B01G419800 | chr2B | 96.183 | 262 | 8 | 2 | 2281 | 2542 | 78097524 | 78097265 | 6.500000e-116 | 427 |
2 | TraesCS2B01G419800 | chr2B | 95.802 | 262 | 10 | 1 | 2281 | 2542 | 800511841 | 800511581 | 3.020000e-114 | 422 |
3 | TraesCS2B01G419800 | chr2B | 100.000 | 197 | 0 | 0 | 1 | 197 | 601355592 | 601355788 | 5.170000e-97 | 364 |
4 | TraesCS2B01G419800 | chr2D | 91.900 | 1642 | 77 | 23 | 453 | 2051 | 512048393 | 512050021 | 0.000000e+00 | 2244 |
5 | TraesCS2B01G419800 | chr2D | 93.617 | 141 | 8 | 1 | 1 | 140 | 512048218 | 512048358 | 2.560000e-50 | 209 |
6 | TraesCS2B01G419800 | chr2A | 88.381 | 1248 | 64 | 28 | 890 | 2089 | 655278826 | 655280040 | 0.000000e+00 | 1426 |
7 | TraesCS2B01G419800 | chr2A | 93.385 | 257 | 13 | 2 | 447 | 699 | 655278415 | 655278671 | 6.640000e-101 | 377 |
8 | TraesCS2B01G419800 | chr2A | 95.556 | 135 | 4 | 1 | 685 | 817 | 655278698 | 655278832 | 5.510000e-52 | 215 |
9 | TraesCS2B01G419800 | chr2A | 87.195 | 164 | 17 | 4 | 1 | 163 | 655278217 | 655278377 | 1.550000e-42 | 183 |
10 | TraesCS2B01G419800 | chr1B | 97.719 | 263 | 5 | 1 | 2281 | 2542 | 636802566 | 636802828 | 3.860000e-123 | 451 |
11 | TraesCS2B01G419800 | chr7B | 96.947 | 262 | 8 | 0 | 2281 | 2542 | 175188613 | 175188352 | 8.350000e-120 | 440 |
12 | TraesCS2B01G419800 | chr7B | 96.183 | 262 | 10 | 0 | 2281 | 2542 | 589922794 | 589923055 | 1.810000e-116 | 429 |
13 | TraesCS2B01G419800 | chr7A | 96.947 | 262 | 8 | 0 | 2281 | 2542 | 254888725 | 254888464 | 8.350000e-120 | 440 |
14 | TraesCS2B01G419800 | chr3B | 96.947 | 262 | 7 | 1 | 2281 | 2542 | 828669177 | 828669437 | 3.000000e-119 | 438 |
15 | TraesCS2B01G419800 | chr4B | 96.565 | 262 | 9 | 0 | 2281 | 2542 | 562876772 | 562877033 | 3.880000e-118 | 435 |
16 | TraesCS2B01G419800 | chr5B | 96.183 | 262 | 10 | 0 | 2281 | 2542 | 534218029 | 534218290 | 1.810000e-116 | 429 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G419800 | chr2B | 601355592 | 601358133 | 2541 | False | 2122.00 | 3880 | 100.00000 | 1 | 2542 | 2 | chr2B.!!$F1 | 2541 |
1 | TraesCS2B01G419800 | chr2D | 512048218 | 512050021 | 1803 | False | 1226.50 | 2244 | 92.75850 | 1 | 2051 | 2 | chr2D.!!$F1 | 2050 |
2 | TraesCS2B01G419800 | chr2A | 655278217 | 655280040 | 1823 | False | 550.25 | 1426 | 91.12925 | 1 | 2089 | 4 | chr2A.!!$F1 | 2088 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
929 | 998 | 1.359848 | CCCACGTTTCTCGATCTTGG | 58.64 | 55.0 | 0.0 | 0.0 | 42.86 | 3.61 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2358 | 2493 | 0.034089 | GCCCAAGGCCTGTCATAAGT | 60.034 | 55.0 | 5.69 | 0.0 | 44.06 | 2.24 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
94 | 96 | 2.937469 | CCATGCTTTGGCGAATGTTA | 57.063 | 45.000 | 0.00 | 0.00 | 39.09 | 2.41 |
154 | 156 | 9.737427 | TTGTACACAAAAATGGTAAACACATAG | 57.263 | 29.630 | 0.00 | 0.00 | 32.11 | 2.23 |
157 | 159 | 6.325286 | ACACAAAAATGGTAAACACATAGGGT | 59.675 | 34.615 | 0.00 | 0.00 | 0.00 | 4.34 |
163 | 165 | 8.480133 | AAATGGTAAACACATAGGGTTTTACA | 57.520 | 30.769 | 2.42 | 3.65 | 39.12 | 2.41 |
164 | 166 | 7.696992 | ATGGTAAACACATAGGGTTTTACAG | 57.303 | 36.000 | 2.42 | 0.00 | 39.12 | 2.74 |
166 | 168 | 5.416639 | GGTAAACACATAGGGTTTTACAGGG | 59.583 | 44.000 | 2.42 | 0.00 | 39.12 | 4.45 |
171 | 173 | 4.457949 | CACATAGGGTTTTACAGGGTGTTC | 59.542 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
173 | 175 | 3.895704 | AGGGTTTTACAGGGTGTTCAT | 57.104 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
174 | 176 | 6.012333 | ACATAGGGTTTTACAGGGTGTTCATA | 60.012 | 38.462 | 0.00 | 0.00 | 0.00 | 2.15 |
175 | 177 | 4.918588 | AGGGTTTTACAGGGTGTTCATAG | 58.081 | 43.478 | 0.00 | 0.00 | 0.00 | 2.23 |
176 | 178 | 4.600111 | AGGGTTTTACAGGGTGTTCATAGA | 59.400 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
178 | 180 | 5.514310 | GGGTTTTACAGGGTGTTCATAGACT | 60.514 | 44.000 | 0.00 | 0.00 | 0.00 | 3.24 |
184 | 186 | 3.100671 | AGGGTGTTCATAGACTCTGTCC | 58.899 | 50.000 | 0.00 | 0.00 | 32.18 | 4.02 |
185 | 187 | 2.832129 | GGGTGTTCATAGACTCTGTCCA | 59.168 | 50.000 | 0.00 | 0.00 | 32.18 | 4.02 |
186 | 188 | 3.260884 | GGGTGTTCATAGACTCTGTCCAA | 59.739 | 47.826 | 0.00 | 0.00 | 32.18 | 3.53 |
188 | 190 | 4.021016 | GGTGTTCATAGACTCTGTCCAACT | 60.021 | 45.833 | 0.00 | 0.00 | 32.18 | 3.16 |
189 | 191 | 5.511545 | GGTGTTCATAGACTCTGTCCAACTT | 60.512 | 44.000 | 0.00 | 0.00 | 32.18 | 2.66 |
190 | 192 | 6.295123 | GGTGTTCATAGACTCTGTCCAACTTA | 60.295 | 42.308 | 0.00 | 0.00 | 32.18 | 2.24 |
191 | 193 | 7.152645 | GTGTTCATAGACTCTGTCCAACTTAA | 58.847 | 38.462 | 0.00 | 0.00 | 32.18 | 1.85 |
192 | 194 | 7.116519 | GTGTTCATAGACTCTGTCCAACTTAAC | 59.883 | 40.741 | 0.00 | 0.00 | 32.18 | 2.01 |
196 | 198 | 7.656137 | TCATAGACTCTGTCCAACTTAACAAAC | 59.344 | 37.037 | 0.00 | 0.00 | 32.18 | 2.93 |
469 | 483 | 4.995487 | CACCTCTAACAACCCTGTAAAGAC | 59.005 | 45.833 | 0.00 | 0.00 | 33.45 | 3.01 |
490 | 504 | 3.243941 | ACTCCGTGTGTGTAGCATTGTTA | 60.244 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
554 | 568 | 1.549203 | GGCACCACTCACCATTCAAT | 58.451 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
567 | 581 | 8.477256 | ACTCACCATTCAATTTTTCTTTTGAGA | 58.523 | 29.630 | 0.00 | 0.00 | 33.68 | 3.27 |
621 | 639 | 2.956132 | TGCCATCCAAGTCTTTTCCAA | 58.044 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
857 | 918 | 8.091385 | TCCTCTAAAATGGAAAGAAAACGTAC | 57.909 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
858 | 919 | 7.935210 | TCCTCTAAAATGGAAAGAAAACGTACT | 59.065 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
859 | 920 | 8.015658 | CCTCTAAAATGGAAAGAAAACGTACTG | 58.984 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
860 | 921 | 8.441312 | TCTAAAATGGAAAGAAAACGTACTGT | 57.559 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
865 | 926 | 4.512571 | TGGAAAGAAAACGTACTGTAAGCC | 59.487 | 41.667 | 0.54 | 0.00 | 37.60 | 4.35 |
929 | 998 | 1.359848 | CCCACGTTTCTCGATCTTGG | 58.640 | 55.000 | 0.00 | 0.00 | 42.86 | 3.61 |
1298 | 1374 | 2.484203 | GGGAGACGAAGACGGTCG | 59.516 | 66.667 | 1.89 | 4.18 | 46.54 | 4.79 |
1315 | 1394 | 2.556459 | CGGCGAGGAGGACGATGAT | 61.556 | 63.158 | 0.00 | 0.00 | 42.31 | 2.45 |
1363 | 1463 | 2.670592 | TGCGACGAGGACTCCGAA | 60.671 | 61.111 | 0.00 | 0.00 | 0.00 | 4.30 |
1467 | 1567 | 1.079266 | GGTGCTGACTGCTGAGAGG | 60.079 | 63.158 | 5.87 | 0.00 | 43.37 | 3.69 |
1500 | 1600 | 6.687958 | GGTCGAGAAATTTTGTTGTTTCGTTA | 59.312 | 34.615 | 0.00 | 0.00 | 38.89 | 3.18 |
1577 | 1694 | 8.397575 | TGTATGCTACAGGAAAATTGTTTGTA | 57.602 | 30.769 | 0.00 | 0.00 | 34.06 | 2.41 |
1578 | 1695 | 8.293867 | TGTATGCTACAGGAAAATTGTTTGTAC | 58.706 | 33.333 | 0.00 | 0.00 | 34.06 | 2.90 |
1585 | 1703 | 7.703328 | ACAGGAAAATTGTTTGTACTGTAGTG | 58.297 | 34.615 | 0.00 | 0.00 | 34.02 | 2.74 |
1594 | 1712 | 8.905660 | TTGTTTGTACTGTAGTGCCTAAATTA | 57.094 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
1614 | 1735 | 8.816640 | AAATTACAGCTTGAATCGTCAATTTT | 57.183 | 26.923 | 0.00 | 0.00 | 42.85 | 1.82 |
1670 | 1795 | 6.926630 | AGGAAAATTGGTACTTTGGCAATA | 57.073 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
1807 | 1938 | 1.133253 | CGCTCCACGCTCATTTGTG | 59.867 | 57.895 | 0.00 | 0.00 | 36.13 | 3.33 |
1886 | 2020 | 1.080995 | TTTTGTGTGCTGGTTTGCGC | 61.081 | 50.000 | 0.00 | 0.00 | 43.07 | 6.09 |
1940 | 2074 | 1.891150 | CTTGTGAAGGGAATGCAAGCT | 59.109 | 47.619 | 0.00 | 0.00 | 31.72 | 3.74 |
1971 | 2105 | 2.742116 | GCTCTACAATGGGCCGGGA | 61.742 | 63.158 | 2.18 | 0.00 | 0.00 | 5.14 |
2058 | 2193 | 4.235762 | CGCCGGTGGACATAGGGG | 62.236 | 72.222 | 7.26 | 0.00 | 0.00 | 4.79 |
2059 | 2194 | 4.564110 | GCCGGTGGACATAGGGGC | 62.564 | 72.222 | 1.90 | 0.00 | 0.00 | 5.80 |
2060 | 2195 | 3.087253 | CCGGTGGACATAGGGGCA | 61.087 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
2061 | 2196 | 2.505982 | CGGTGGACATAGGGGCAG | 59.494 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
2062 | 2197 | 2.193248 | GGTGGACATAGGGGCAGC | 59.807 | 66.667 | 0.00 | 0.00 | 0.00 | 5.25 |
2064 | 2199 | 1.302949 | GTGGACATAGGGGCAGCAA | 59.697 | 57.895 | 0.00 | 0.00 | 0.00 | 3.91 |
2065 | 2200 | 0.323360 | GTGGACATAGGGGCAGCAAA | 60.323 | 55.000 | 0.00 | 0.00 | 0.00 | 3.68 |
2066 | 2201 | 0.034186 | TGGACATAGGGGCAGCAAAG | 60.034 | 55.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2067 | 2202 | 1.387295 | GGACATAGGGGCAGCAAAGC | 61.387 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2068 | 2203 | 0.680921 | GACATAGGGGCAGCAAAGCA | 60.681 | 55.000 | 0.00 | 0.00 | 35.83 | 3.91 |
2075 | 2210 | 0.390735 | GGGCAGCAAAGCAAAGGATG | 60.391 | 55.000 | 0.00 | 0.00 | 35.83 | 3.51 |
2076 | 2211 | 0.604578 | GGCAGCAAAGCAAAGGATGA | 59.395 | 50.000 | 0.00 | 0.00 | 35.83 | 2.92 |
2082 | 2217 | 2.796593 | GCAAAGCAAAGGATGACAACAC | 59.203 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
2089 | 2224 | 2.677003 | GGATGACAACACGCGGTGG | 61.677 | 63.158 | 12.47 | 5.76 | 37.94 | 4.61 |
2090 | 2225 | 1.959226 | GATGACAACACGCGGTGGT | 60.959 | 57.895 | 12.47 | 9.44 | 37.94 | 4.16 |
2091 | 2226 | 0.668096 | GATGACAACACGCGGTGGTA | 60.668 | 55.000 | 12.47 | 0.00 | 37.94 | 3.25 |
2092 | 2227 | 0.669318 | ATGACAACACGCGGTGGTAG | 60.669 | 55.000 | 12.47 | 3.23 | 37.94 | 3.18 |
2093 | 2228 | 1.007038 | GACAACACGCGGTGGTAGA | 60.007 | 57.895 | 12.47 | 0.00 | 37.94 | 2.59 |
2094 | 2229 | 1.006571 | ACAACACGCGGTGGTAGAG | 60.007 | 57.895 | 12.47 | 2.55 | 37.94 | 2.43 |
2095 | 2230 | 1.287815 | CAACACGCGGTGGTAGAGA | 59.712 | 57.895 | 12.47 | 0.00 | 37.94 | 3.10 |
2096 | 2231 | 0.108804 | CAACACGCGGTGGTAGAGAT | 60.109 | 55.000 | 12.47 | 0.00 | 37.94 | 2.75 |
2097 | 2232 | 0.606604 | AACACGCGGTGGTAGAGATT | 59.393 | 50.000 | 12.47 | 0.00 | 37.94 | 2.40 |
2098 | 2233 | 0.606604 | ACACGCGGTGGTAGAGATTT | 59.393 | 50.000 | 12.47 | 0.00 | 37.94 | 2.17 |
2099 | 2234 | 1.001633 | ACACGCGGTGGTAGAGATTTT | 59.998 | 47.619 | 12.47 | 0.00 | 37.94 | 1.82 |
2100 | 2235 | 2.073816 | CACGCGGTGGTAGAGATTTTT | 58.926 | 47.619 | 12.47 | 0.00 | 0.00 | 1.94 |
2140 | 2275 | 9.256477 | TGGAACACTATGATTCGATACATTAAC | 57.744 | 33.333 | 9.48 | 0.00 | 0.00 | 2.01 |
2141 | 2276 | 8.709646 | GGAACACTATGATTCGATACATTAACC | 58.290 | 37.037 | 9.48 | 0.00 | 0.00 | 2.85 |
2142 | 2277 | 9.256477 | GAACACTATGATTCGATACATTAACCA | 57.744 | 33.333 | 9.48 | 0.00 | 0.00 | 3.67 |
2143 | 2278 | 8.818141 | ACACTATGATTCGATACATTAACCAG | 57.182 | 34.615 | 9.48 | 4.61 | 0.00 | 4.00 |
2144 | 2279 | 7.872993 | ACACTATGATTCGATACATTAACCAGG | 59.127 | 37.037 | 9.48 | 0.00 | 0.00 | 4.45 |
2145 | 2280 | 7.872993 | CACTATGATTCGATACATTAACCAGGT | 59.127 | 37.037 | 9.48 | 0.00 | 0.00 | 4.00 |
2146 | 2281 | 8.088981 | ACTATGATTCGATACATTAACCAGGTC | 58.911 | 37.037 | 9.48 | 0.00 | 0.00 | 3.85 |
2147 | 2282 | 5.607477 | TGATTCGATACATTAACCAGGTCC | 58.393 | 41.667 | 0.00 | 0.00 | 0.00 | 4.46 |
2148 | 2283 | 5.129650 | TGATTCGATACATTAACCAGGTCCA | 59.870 | 40.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2149 | 2284 | 4.665833 | TCGATACATTAACCAGGTCCAG | 57.334 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2150 | 2285 | 3.131396 | CGATACATTAACCAGGTCCAGC | 58.869 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2151 | 2286 | 3.477530 | GATACATTAACCAGGTCCAGCC | 58.522 | 50.000 | 0.00 | 0.00 | 37.58 | 4.85 |
2152 | 2287 | 1.072266 | ACATTAACCAGGTCCAGCCA | 58.928 | 50.000 | 0.00 | 0.00 | 40.61 | 4.75 |
2153 | 2288 | 1.004745 | ACATTAACCAGGTCCAGCCAG | 59.995 | 52.381 | 0.00 | 0.00 | 40.61 | 4.85 |
2155 | 2290 | 2.137177 | TTAACCAGGTCCAGCCAGGC | 62.137 | 60.000 | 1.84 | 1.84 | 46.95 | 4.85 |
2156 | 2291 | 4.990910 | ACCAGGTCCAGCCAGGCT | 62.991 | 66.667 | 8.70 | 8.70 | 46.95 | 4.58 |
2176 | 2311 | 3.353600 | TCGCCCGTCGAACACTTA | 58.646 | 55.556 | 0.00 | 0.00 | 45.36 | 2.24 |
2177 | 2312 | 1.081242 | TCGCCCGTCGAACACTTAC | 60.081 | 57.895 | 0.00 | 0.00 | 45.36 | 2.34 |
2178 | 2313 | 1.372004 | CGCCCGTCGAACACTTACA | 60.372 | 57.895 | 0.00 | 0.00 | 41.67 | 2.41 |
2179 | 2314 | 0.734942 | CGCCCGTCGAACACTTACAT | 60.735 | 55.000 | 0.00 | 0.00 | 41.67 | 2.29 |
2180 | 2315 | 0.997196 | GCCCGTCGAACACTTACATC | 59.003 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2181 | 2316 | 1.670674 | GCCCGTCGAACACTTACATCA | 60.671 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
2182 | 2317 | 2.888594 | CCCGTCGAACACTTACATCAT | 58.111 | 47.619 | 0.00 | 0.00 | 0.00 | 2.45 |
2183 | 2318 | 3.735820 | GCCCGTCGAACACTTACATCATA | 60.736 | 47.826 | 0.00 | 0.00 | 0.00 | 2.15 |
2184 | 2319 | 4.617959 | CCCGTCGAACACTTACATCATAT | 58.382 | 43.478 | 0.00 | 0.00 | 0.00 | 1.78 |
2185 | 2320 | 4.444388 | CCCGTCGAACACTTACATCATATG | 59.556 | 45.833 | 0.00 | 0.00 | 0.00 | 1.78 |
2186 | 2321 | 4.444388 | CCGTCGAACACTTACATCATATGG | 59.556 | 45.833 | 2.13 | 0.00 | 33.60 | 2.74 |
2187 | 2322 | 4.444388 | CGTCGAACACTTACATCATATGGG | 59.556 | 45.833 | 2.13 | 0.00 | 33.60 | 4.00 |
2188 | 2323 | 5.597806 | GTCGAACACTTACATCATATGGGA | 58.402 | 41.667 | 2.13 | 0.00 | 33.60 | 4.37 |
2189 | 2324 | 5.692204 | GTCGAACACTTACATCATATGGGAG | 59.308 | 44.000 | 2.13 | 0.00 | 33.60 | 4.30 |
2190 | 2325 | 4.991056 | CGAACACTTACATCATATGGGAGG | 59.009 | 45.833 | 2.13 | 0.00 | 33.60 | 4.30 |
2191 | 2326 | 4.982241 | ACACTTACATCATATGGGAGGG | 57.018 | 45.455 | 2.13 | 0.00 | 33.60 | 4.30 |
2192 | 2327 | 3.073062 | ACACTTACATCATATGGGAGGGC | 59.927 | 47.826 | 2.13 | 0.00 | 33.60 | 5.19 |
2193 | 2328 | 3.328931 | CACTTACATCATATGGGAGGGCT | 59.671 | 47.826 | 2.13 | 0.00 | 33.60 | 5.19 |
2194 | 2329 | 3.983410 | ACTTACATCATATGGGAGGGCTT | 59.017 | 43.478 | 2.13 | 0.00 | 33.60 | 4.35 |
2195 | 2330 | 4.042187 | ACTTACATCATATGGGAGGGCTTC | 59.958 | 45.833 | 2.13 | 0.00 | 33.60 | 3.86 |
2196 | 2331 | 2.421725 | ACATCATATGGGAGGGCTTCA | 58.578 | 47.619 | 2.13 | 0.00 | 33.60 | 3.02 |
2197 | 2332 | 2.785269 | ACATCATATGGGAGGGCTTCAA | 59.215 | 45.455 | 2.13 | 0.00 | 33.60 | 2.69 |
2198 | 2333 | 3.181436 | ACATCATATGGGAGGGCTTCAAG | 60.181 | 47.826 | 2.13 | 0.00 | 33.60 | 3.02 |
2199 | 2334 | 2.492025 | TCATATGGGAGGGCTTCAAGT | 58.508 | 47.619 | 2.13 | 0.00 | 0.00 | 3.16 |
2200 | 2335 | 2.439507 | TCATATGGGAGGGCTTCAAGTC | 59.560 | 50.000 | 2.13 | 0.00 | 0.00 | 3.01 |
2201 | 2336 | 1.965414 | TATGGGAGGGCTTCAAGTCA | 58.035 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2202 | 2337 | 1.302907 | ATGGGAGGGCTTCAAGTCAT | 58.697 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2203 | 2338 | 1.965414 | TGGGAGGGCTTCAAGTCATA | 58.035 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2204 | 2339 | 2.492025 | TGGGAGGGCTTCAAGTCATAT | 58.508 | 47.619 | 0.00 | 0.00 | 0.00 | 1.78 |
2205 | 2340 | 2.439507 | TGGGAGGGCTTCAAGTCATATC | 59.560 | 50.000 | 0.00 | 0.00 | 0.00 | 1.63 |
2206 | 2341 | 2.708325 | GGGAGGGCTTCAAGTCATATCT | 59.292 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2207 | 2342 | 3.244387 | GGGAGGGCTTCAAGTCATATCTC | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 2.75 |
2208 | 2343 | 3.244387 | GGAGGGCTTCAAGTCATATCTCC | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 3.71 |
2209 | 2344 | 2.708325 | AGGGCTTCAAGTCATATCTCCC | 59.292 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2210 | 2345 | 2.548920 | GGGCTTCAAGTCATATCTCCCG | 60.549 | 54.545 | 0.00 | 0.00 | 0.00 | 5.14 |
2211 | 2346 | 2.365617 | GGCTTCAAGTCATATCTCCCGA | 59.634 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
2212 | 2347 | 3.181465 | GGCTTCAAGTCATATCTCCCGAA | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2213 | 2348 | 3.804873 | GCTTCAAGTCATATCTCCCGAAC | 59.195 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
2214 | 2349 | 4.680708 | GCTTCAAGTCATATCTCCCGAACA | 60.681 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
2215 | 2350 | 5.414789 | TTCAAGTCATATCTCCCGAACAA | 57.585 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
2216 | 2351 | 4.755411 | TCAAGTCATATCTCCCGAACAAC | 58.245 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
2217 | 2352 | 3.438297 | AGTCATATCTCCCGAACAACG | 57.562 | 47.619 | 0.00 | 0.00 | 42.18 | 4.10 |
2218 | 2353 | 3.021695 | AGTCATATCTCCCGAACAACGA | 58.978 | 45.455 | 0.00 | 0.00 | 45.77 | 3.85 |
2219 | 2354 | 3.066900 | AGTCATATCTCCCGAACAACGAG | 59.933 | 47.826 | 0.00 | 0.00 | 45.77 | 4.18 |
2220 | 2355 | 2.361119 | TCATATCTCCCGAACAACGAGG | 59.639 | 50.000 | 0.00 | 0.00 | 45.77 | 4.63 |
2221 | 2356 | 0.458669 | TATCTCCCGAACAACGAGGC | 59.541 | 55.000 | 0.00 | 0.00 | 45.77 | 4.70 |
2222 | 2357 | 2.558554 | ATCTCCCGAACAACGAGGCG | 62.559 | 60.000 | 0.00 | 0.00 | 45.77 | 5.52 |
2225 | 2360 | 3.041940 | CCGAACAACGAGGCGCTT | 61.042 | 61.111 | 7.64 | 0.00 | 45.77 | 4.68 |
2226 | 2361 | 2.604174 | CCGAACAACGAGGCGCTTT | 61.604 | 57.895 | 7.64 | 0.00 | 45.77 | 3.51 |
2227 | 2362 | 1.438710 | CGAACAACGAGGCGCTTTG | 60.439 | 57.895 | 7.64 | 6.21 | 45.77 | 2.77 |
2228 | 2363 | 1.725973 | GAACAACGAGGCGCTTTGC | 60.726 | 57.895 | 7.64 | 0.00 | 45.38 | 3.68 |
2229 | 2364 | 2.117941 | GAACAACGAGGCGCTTTGCT | 62.118 | 55.000 | 7.64 | 0.00 | 45.43 | 3.91 |
2230 | 2365 | 2.117941 | AACAACGAGGCGCTTTGCTC | 62.118 | 55.000 | 7.64 | 4.10 | 45.43 | 4.26 |
2231 | 2366 | 3.050275 | AACGAGGCGCTTTGCTCC | 61.050 | 61.111 | 7.64 | 0.00 | 45.43 | 4.70 |
2232 | 2367 | 3.825160 | AACGAGGCGCTTTGCTCCA | 62.825 | 57.895 | 7.64 | 0.00 | 45.43 | 3.86 |
2233 | 2368 | 3.049674 | CGAGGCGCTTTGCTCCAA | 61.050 | 61.111 | 7.64 | 0.00 | 45.43 | 3.53 |
2234 | 2369 | 2.616330 | CGAGGCGCTTTGCTCCAAA | 61.616 | 57.895 | 7.64 | 0.00 | 45.43 | 3.28 |
2235 | 2370 | 1.659794 | GAGGCGCTTTGCTCCAAAA | 59.340 | 52.632 | 7.64 | 0.00 | 45.43 | 2.44 |
2236 | 2371 | 0.387750 | GAGGCGCTTTGCTCCAAAAG | 60.388 | 55.000 | 7.64 | 0.00 | 45.43 | 2.27 |
2246 | 2381 | 1.208614 | CTCCAAAAGCAGCGACAGC | 59.791 | 57.895 | 0.00 | 0.00 | 45.58 | 4.40 |
2260 | 2395 | 4.542662 | GCGACAGCATGAACTAAATCAT | 57.457 | 40.909 | 0.00 | 0.00 | 44.35 | 2.45 |
2261 | 2396 | 4.913376 | GCGACAGCATGAACTAAATCATT | 58.087 | 39.130 | 0.00 | 0.00 | 44.35 | 2.57 |
2262 | 2397 | 6.048073 | GCGACAGCATGAACTAAATCATTA | 57.952 | 37.500 | 0.00 | 0.00 | 44.35 | 1.90 |
2263 | 2398 | 5.904080 | GCGACAGCATGAACTAAATCATTAC | 59.096 | 40.000 | 0.00 | 0.00 | 44.35 | 1.89 |
2264 | 2399 | 6.456853 | GCGACAGCATGAACTAAATCATTACA | 60.457 | 38.462 | 0.00 | 0.00 | 44.35 | 2.41 |
2265 | 2400 | 7.463544 | CGACAGCATGAACTAAATCATTACAA | 58.536 | 34.615 | 0.00 | 0.00 | 39.69 | 2.41 |
2266 | 2401 | 7.426456 | CGACAGCATGAACTAAATCATTACAAC | 59.574 | 37.037 | 0.00 | 0.00 | 39.69 | 3.32 |
2267 | 2402 | 7.538575 | ACAGCATGAACTAAATCATTACAACC | 58.461 | 34.615 | 0.00 | 0.00 | 39.69 | 3.77 |
2268 | 2403 | 6.974622 | CAGCATGAACTAAATCATTACAACCC | 59.025 | 38.462 | 0.00 | 0.00 | 39.69 | 4.11 |
2269 | 2404 | 6.096846 | AGCATGAACTAAATCATTACAACCCC | 59.903 | 38.462 | 0.00 | 0.00 | 37.96 | 4.95 |
2270 | 2405 | 6.096846 | GCATGAACTAAATCATTACAACCCCT | 59.903 | 38.462 | 0.00 | 0.00 | 37.96 | 4.79 |
2271 | 2406 | 7.363793 | GCATGAACTAAATCATTACAACCCCTT | 60.364 | 37.037 | 0.00 | 0.00 | 37.96 | 3.95 |
2272 | 2407 | 7.461182 | TGAACTAAATCATTACAACCCCTTG | 57.539 | 36.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2273 | 2408 | 6.435904 | TGAACTAAATCATTACAACCCCTTGG | 59.564 | 38.462 | 0.00 | 0.00 | 37.80 | 3.61 |
2284 | 2419 | 3.339547 | CCCCTTGGGGCATATTACG | 57.660 | 57.895 | 12.40 | 0.00 | 42.67 | 3.18 |
2285 | 2420 | 0.893727 | CCCCTTGGGGCATATTACGC | 60.894 | 60.000 | 12.40 | 0.00 | 42.67 | 4.42 |
2286 | 2421 | 0.179004 | CCCTTGGGGCATATTACGCA | 60.179 | 55.000 | 0.00 | 0.00 | 35.35 | 5.24 |
2287 | 2422 | 1.686355 | CCTTGGGGCATATTACGCAA | 58.314 | 50.000 | 5.96 | 5.96 | 37.82 | 4.85 |
2288 | 2423 | 2.238521 | CCTTGGGGCATATTACGCAAT | 58.761 | 47.619 | 6.41 | 0.00 | 38.57 | 3.56 |
2289 | 2424 | 2.228822 | CCTTGGGGCATATTACGCAATC | 59.771 | 50.000 | 6.41 | 0.00 | 38.57 | 2.67 |
2290 | 2425 | 1.904287 | TGGGGCATATTACGCAATCC | 58.096 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2291 | 2426 | 1.173913 | GGGGCATATTACGCAATCCC | 58.826 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2292 | 2427 | 0.802494 | GGGCATATTACGCAATCCCG | 59.198 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
2293 | 2428 | 0.802494 | GGCATATTACGCAATCCCGG | 59.198 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
2294 | 2429 | 0.802494 | GCATATTACGCAATCCCGGG | 59.198 | 55.000 | 16.85 | 16.85 | 0.00 | 5.73 |
2295 | 2430 | 1.609580 | GCATATTACGCAATCCCGGGA | 60.610 | 52.381 | 29.18 | 29.18 | 0.00 | 5.14 |
2296 | 2431 | 2.073816 | CATATTACGCAATCCCGGGAC | 58.926 | 52.381 | 29.69 | 13.14 | 0.00 | 4.46 |
2297 | 2432 | 0.393820 | TATTACGCAATCCCGGGACC | 59.606 | 55.000 | 29.69 | 16.49 | 0.00 | 4.46 |
2298 | 2433 | 2.653953 | ATTACGCAATCCCGGGACCG | 62.654 | 60.000 | 29.69 | 28.88 | 39.44 | 4.79 |
2301 | 2436 | 3.857038 | GCAATCCCGGGACCGCTA | 61.857 | 66.667 | 30.16 | 9.17 | 38.24 | 4.26 |
2302 | 2437 | 3.148084 | CAATCCCGGGACCGCTAT | 58.852 | 61.111 | 29.69 | 5.54 | 38.24 | 2.97 |
2303 | 2438 | 1.004918 | CAATCCCGGGACCGCTATC | 60.005 | 63.158 | 29.69 | 0.00 | 38.24 | 2.08 |
2304 | 2439 | 1.458777 | AATCCCGGGACCGCTATCA | 60.459 | 57.895 | 29.69 | 0.00 | 38.24 | 2.15 |
2305 | 2440 | 1.755393 | AATCCCGGGACCGCTATCAC | 61.755 | 60.000 | 29.69 | 0.00 | 38.24 | 3.06 |
2306 | 2441 | 3.925090 | CCCGGGACCGCTATCACC | 61.925 | 72.222 | 18.48 | 0.00 | 38.24 | 4.02 |
2307 | 2442 | 3.151710 | CCGGGACCGCTATCACCA | 61.152 | 66.667 | 4.98 | 0.00 | 38.24 | 4.17 |
2308 | 2443 | 2.417516 | CGGGACCGCTATCACCAG | 59.582 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
2309 | 2444 | 2.109181 | GGGACCGCTATCACCAGC | 59.891 | 66.667 | 0.00 | 0.00 | 38.23 | 4.85 |
2327 | 2462 | 4.838959 | GTTTTCGACCCACATGCG | 57.161 | 55.556 | 0.00 | 0.00 | 0.00 | 4.73 |
2328 | 2463 | 1.946267 | GTTTTCGACCCACATGCGT | 59.054 | 52.632 | 0.00 | 0.00 | 0.00 | 5.24 |
2329 | 2464 | 0.110373 | GTTTTCGACCCACATGCGTC | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2330 | 2465 | 0.533085 | TTTTCGACCCACATGCGTCA | 60.533 | 50.000 | 8.41 | 0.00 | 0.00 | 4.35 |
2331 | 2466 | 0.533085 | TTTCGACCCACATGCGTCAA | 60.533 | 50.000 | 8.41 | 1.22 | 0.00 | 3.18 |
2332 | 2467 | 0.321210 | TTCGACCCACATGCGTCAAT | 60.321 | 50.000 | 8.41 | 0.00 | 0.00 | 2.57 |
2333 | 2468 | 0.739462 | TCGACCCACATGCGTCAATC | 60.739 | 55.000 | 8.41 | 0.00 | 0.00 | 2.67 |
2334 | 2469 | 1.018752 | CGACCCACATGCGTCAATCA | 61.019 | 55.000 | 8.41 | 0.00 | 0.00 | 2.57 |
2335 | 2470 | 0.729116 | GACCCACATGCGTCAATCAG | 59.271 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2336 | 2471 | 0.324614 | ACCCACATGCGTCAATCAGA | 59.675 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2337 | 2472 | 0.729116 | CCCACATGCGTCAATCAGAC | 59.271 | 55.000 | 0.00 | 0.00 | 44.02 | 3.51 |
2338 | 2473 | 0.729116 | CCACATGCGTCAATCAGACC | 59.271 | 55.000 | 0.00 | 0.00 | 44.66 | 3.85 |
2339 | 2474 | 0.729116 | CACATGCGTCAATCAGACCC | 59.271 | 55.000 | 0.00 | 0.00 | 44.66 | 4.46 |
2340 | 2475 | 0.324614 | ACATGCGTCAATCAGACCCA | 59.675 | 50.000 | 0.00 | 0.00 | 44.66 | 4.51 |
2341 | 2476 | 1.271325 | ACATGCGTCAATCAGACCCAA | 60.271 | 47.619 | 0.00 | 0.00 | 44.66 | 4.12 |
2342 | 2477 | 1.131126 | CATGCGTCAATCAGACCCAAC | 59.869 | 52.381 | 0.00 | 0.00 | 44.66 | 3.77 |
2343 | 2478 | 0.605319 | TGCGTCAATCAGACCCAACC | 60.605 | 55.000 | 0.00 | 0.00 | 44.66 | 3.77 |
2344 | 2479 | 1.635663 | GCGTCAATCAGACCCAACCG | 61.636 | 60.000 | 0.00 | 0.00 | 44.66 | 4.44 |
2345 | 2480 | 1.019278 | CGTCAATCAGACCCAACCGG | 61.019 | 60.000 | 0.00 | 0.00 | 44.66 | 5.28 |
2346 | 2481 | 0.323629 | GTCAATCAGACCCAACCGGA | 59.676 | 55.000 | 9.46 | 0.00 | 41.56 | 5.14 |
2347 | 2482 | 0.613260 | TCAATCAGACCCAACCGGAG | 59.387 | 55.000 | 9.46 | 0.00 | 34.64 | 4.63 |
2348 | 2483 | 0.613260 | CAATCAGACCCAACCGGAGA | 59.387 | 55.000 | 9.46 | 0.00 | 34.64 | 3.71 |
2349 | 2484 | 0.905357 | AATCAGACCCAACCGGAGAG | 59.095 | 55.000 | 9.46 | 0.00 | 34.64 | 3.20 |
2350 | 2485 | 1.617947 | ATCAGACCCAACCGGAGAGC | 61.618 | 60.000 | 9.46 | 0.00 | 34.64 | 4.09 |
2351 | 2486 | 2.203788 | AGACCCAACCGGAGAGCA | 60.204 | 61.111 | 9.46 | 0.00 | 34.64 | 4.26 |
2352 | 2487 | 1.841556 | AGACCCAACCGGAGAGCAA | 60.842 | 57.895 | 9.46 | 0.00 | 34.64 | 3.91 |
2353 | 2488 | 1.671379 | GACCCAACCGGAGAGCAAC | 60.671 | 63.158 | 9.46 | 0.00 | 34.64 | 4.17 |
2354 | 2489 | 2.391724 | GACCCAACCGGAGAGCAACA | 62.392 | 60.000 | 9.46 | 0.00 | 34.64 | 3.33 |
2355 | 2490 | 1.966451 | CCCAACCGGAGAGCAACAC | 60.966 | 63.158 | 9.46 | 0.00 | 0.00 | 3.32 |
2356 | 2491 | 1.966451 | CCAACCGGAGAGCAACACC | 60.966 | 63.158 | 9.46 | 0.00 | 0.00 | 4.16 |
2363 | 2498 | 2.674796 | GGAGAGCAACACCGACTTAT | 57.325 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2364 | 2499 | 2.271800 | GGAGAGCAACACCGACTTATG | 58.728 | 52.381 | 0.00 | 0.00 | 0.00 | 1.90 |
2365 | 2500 | 2.094182 | GGAGAGCAACACCGACTTATGA | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2366 | 2501 | 2.924290 | GAGAGCAACACCGACTTATGAC | 59.076 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2367 | 2502 | 2.299013 | AGAGCAACACCGACTTATGACA | 59.701 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
2368 | 2503 | 2.668457 | GAGCAACACCGACTTATGACAG | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2369 | 2504 | 1.732259 | GCAACACCGACTTATGACAGG | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
2370 | 2505 | 1.732259 | CAACACCGACTTATGACAGGC | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
2371 | 2506 | 0.249398 | ACACCGACTTATGACAGGCC | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2372 | 2507 | 0.537188 | CACCGACTTATGACAGGCCT | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2373 | 2508 | 1.066143 | CACCGACTTATGACAGGCCTT | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
2374 | 2509 | 1.066143 | ACCGACTTATGACAGGCCTTG | 60.066 | 52.381 | 0.00 | 0.66 | 0.00 | 3.61 |
2375 | 2510 | 1.656652 | CGACTTATGACAGGCCTTGG | 58.343 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2376 | 2511 | 1.743772 | CGACTTATGACAGGCCTTGGG | 60.744 | 57.143 | 0.00 | 0.00 | 0.00 | 4.12 |
2402 | 2537 | 3.577389 | CCCCCAAAAGACTAGCCTG | 57.423 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
2403 | 2538 | 0.698818 | CCCCCAAAAGACTAGCCTGT | 59.301 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2404 | 2539 | 1.075536 | CCCCCAAAAGACTAGCCTGTT | 59.924 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
2405 | 2540 | 2.307686 | CCCCCAAAAGACTAGCCTGTTA | 59.692 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2406 | 2541 | 3.610911 | CCCCAAAAGACTAGCCTGTTAG | 58.389 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
2407 | 2542 | 3.610911 | CCCAAAAGACTAGCCTGTTAGG | 58.389 | 50.000 | 0.00 | 0.00 | 38.80 | 2.69 |
2408 | 2543 | 3.263425 | CCCAAAAGACTAGCCTGTTAGGA | 59.737 | 47.826 | 0.00 | 0.00 | 37.67 | 2.94 |
2409 | 2544 | 4.508662 | CCAAAAGACTAGCCTGTTAGGAG | 58.491 | 47.826 | 0.00 | 0.00 | 37.67 | 3.69 |
2410 | 2545 | 4.508662 | CAAAAGACTAGCCTGTTAGGAGG | 58.491 | 47.826 | 0.00 | 0.00 | 37.67 | 4.30 |
2411 | 2546 | 2.463047 | AGACTAGCCTGTTAGGAGGG | 57.537 | 55.000 | 0.00 | 0.00 | 37.67 | 4.30 |
2412 | 2547 | 1.062810 | AGACTAGCCTGTTAGGAGGGG | 60.063 | 57.143 | 0.00 | 0.00 | 37.67 | 4.79 |
2413 | 2548 | 1.016415 | ACTAGCCTGTTAGGAGGGGA | 58.984 | 55.000 | 0.00 | 0.00 | 37.67 | 4.81 |
2414 | 2549 | 1.343176 | ACTAGCCTGTTAGGAGGGGAC | 60.343 | 57.143 | 0.00 | 0.00 | 37.67 | 4.46 |
2415 | 2550 | 0.714180 | TAGCCTGTTAGGAGGGGACA | 59.286 | 55.000 | 0.00 | 0.00 | 37.67 | 4.02 |
2416 | 2551 | 0.910088 | AGCCTGTTAGGAGGGGACAC | 60.910 | 60.000 | 0.00 | 0.00 | 37.67 | 3.67 |
2417 | 2552 | 1.911702 | GCCTGTTAGGAGGGGACACC | 61.912 | 65.000 | 0.00 | 0.00 | 37.67 | 4.16 |
2428 | 2563 | 3.094498 | GGACACCCCCGCCCTTAT | 61.094 | 66.667 | 0.00 | 0.00 | 0.00 | 1.73 |
2429 | 2564 | 1.767268 | GGACACCCCCGCCCTTATA | 60.767 | 63.158 | 0.00 | 0.00 | 0.00 | 0.98 |
2430 | 2565 | 1.347243 | GGACACCCCCGCCCTTATAA | 61.347 | 60.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2431 | 2566 | 0.108019 | GACACCCCCGCCCTTATAAG | 59.892 | 60.000 | 5.43 | 5.43 | 0.00 | 1.73 |
2432 | 2567 | 0.622446 | ACACCCCCGCCCTTATAAGT | 60.622 | 55.000 | 11.50 | 0.00 | 0.00 | 2.24 |
2433 | 2568 | 0.108019 | CACCCCCGCCCTTATAAGTC | 59.892 | 60.000 | 11.50 | 2.37 | 0.00 | 3.01 |
2434 | 2569 | 1.370064 | CCCCCGCCCTTATAAGTCG | 59.630 | 63.158 | 11.50 | 12.97 | 0.00 | 4.18 |
2435 | 2570 | 1.405272 | CCCCCGCCCTTATAAGTCGT | 61.405 | 60.000 | 11.50 | 0.00 | 0.00 | 4.34 |
2436 | 2571 | 0.249741 | CCCCGCCCTTATAAGTCGTG | 60.250 | 60.000 | 11.50 | 7.40 | 0.00 | 4.35 |
2437 | 2572 | 0.462789 | CCCGCCCTTATAAGTCGTGT | 59.537 | 55.000 | 11.50 | 0.00 | 0.00 | 4.49 |
2438 | 2573 | 1.134610 | CCCGCCCTTATAAGTCGTGTT | 60.135 | 52.381 | 11.50 | 0.00 | 0.00 | 3.32 |
2439 | 2574 | 2.101249 | CCCGCCCTTATAAGTCGTGTTA | 59.899 | 50.000 | 11.50 | 0.00 | 0.00 | 2.41 |
2440 | 2575 | 3.243975 | CCCGCCCTTATAAGTCGTGTTAT | 60.244 | 47.826 | 11.50 | 0.00 | 0.00 | 1.89 |
2441 | 2576 | 4.374399 | CCGCCCTTATAAGTCGTGTTATT | 58.626 | 43.478 | 11.50 | 0.00 | 0.00 | 1.40 |
2442 | 2577 | 4.812626 | CCGCCCTTATAAGTCGTGTTATTT | 59.187 | 41.667 | 11.50 | 0.00 | 0.00 | 1.40 |
2443 | 2578 | 5.050567 | CCGCCCTTATAAGTCGTGTTATTTC | 60.051 | 44.000 | 11.50 | 0.00 | 0.00 | 2.17 |
2444 | 2579 | 5.751990 | CGCCCTTATAAGTCGTGTTATTTCT | 59.248 | 40.000 | 11.50 | 0.00 | 0.00 | 2.52 |
2445 | 2580 | 6.074463 | CGCCCTTATAAGTCGTGTTATTTCTC | 60.074 | 42.308 | 11.50 | 0.00 | 0.00 | 2.87 |
2446 | 2581 | 6.202379 | GCCCTTATAAGTCGTGTTATTTCTCC | 59.798 | 42.308 | 11.50 | 0.00 | 0.00 | 3.71 |
2447 | 2582 | 6.704937 | CCCTTATAAGTCGTGTTATTTCTCCC | 59.295 | 42.308 | 11.50 | 0.00 | 0.00 | 4.30 |
2448 | 2583 | 6.704937 | CCTTATAAGTCGTGTTATTTCTCCCC | 59.295 | 42.308 | 11.50 | 0.00 | 0.00 | 4.81 |
2449 | 2584 | 3.345508 | AAGTCGTGTTATTTCTCCCCC | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 5.40 |
2472 | 2607 | 3.751518 | ACAACTGATGTGGGACTAAACC | 58.248 | 45.455 | 0.00 | 0.00 | 41.93 | 3.27 |
2484 | 2619 | 3.353557 | GGACTAAACCCAACAATCTCCC | 58.646 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2485 | 2620 | 3.353557 | GACTAAACCCAACAATCTCCCC | 58.646 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
2486 | 2621 | 2.042569 | ACTAAACCCAACAATCTCCCCC | 59.957 | 50.000 | 0.00 | 0.00 | 0.00 | 5.40 |
2487 | 2622 | 1.167033 | AAACCCAACAATCTCCCCCT | 58.833 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2488 | 2623 | 0.704664 | AACCCAACAATCTCCCCCTC | 59.295 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2489 | 2624 | 0.477597 | ACCCAACAATCTCCCCCTCA | 60.478 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2490 | 2625 | 0.034089 | CCCAACAATCTCCCCCTCAC | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2491 | 2626 | 0.698238 | CCAACAATCTCCCCCTCACA | 59.302 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2492 | 2627 | 1.614317 | CCAACAATCTCCCCCTCACAC | 60.614 | 57.143 | 0.00 | 0.00 | 0.00 | 3.82 |
2493 | 2628 | 1.073763 | CAACAATCTCCCCCTCACACA | 59.926 | 52.381 | 0.00 | 0.00 | 0.00 | 3.72 |
2494 | 2629 | 1.673767 | ACAATCTCCCCCTCACACAT | 58.326 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2495 | 2630 | 1.561542 | ACAATCTCCCCCTCACACATC | 59.438 | 52.381 | 0.00 | 0.00 | 0.00 | 3.06 |
2496 | 2631 | 0.833287 | AATCTCCCCCTCACACATCG | 59.167 | 55.000 | 0.00 | 0.00 | 0.00 | 3.84 |
2497 | 2632 | 1.050988 | ATCTCCCCCTCACACATCGG | 61.051 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2498 | 2633 | 1.990060 | CTCCCCCTCACACATCGGT | 60.990 | 63.158 | 0.00 | 0.00 | 0.00 | 4.69 |
2499 | 2634 | 1.961180 | CTCCCCCTCACACATCGGTC | 61.961 | 65.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2500 | 2635 | 2.290287 | CCCCCTCACACATCGGTCA | 61.290 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
2501 | 2636 | 1.626356 | CCCCCTCACACATCGGTCAT | 61.626 | 60.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2502 | 2637 | 0.179073 | CCCCTCACACATCGGTCATC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2503 | 2638 | 0.179073 | CCCTCACACATCGGTCATCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2504 | 2639 | 0.536724 | CCTCACACATCGGTCATCCA | 59.463 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2505 | 2640 | 1.139654 | CCTCACACATCGGTCATCCAT | 59.860 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2506 | 2641 | 2.207590 | CTCACACATCGGTCATCCATG | 58.792 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
2507 | 2642 | 1.134431 | TCACACATCGGTCATCCATGG | 60.134 | 52.381 | 4.97 | 4.97 | 31.40 | 3.66 |
2508 | 2643 | 0.181114 | ACACATCGGTCATCCATGGG | 59.819 | 55.000 | 13.02 | 0.00 | 34.32 | 4.00 |
2509 | 2644 | 1.149174 | ACATCGGTCATCCATGGGC | 59.851 | 57.895 | 13.02 | 0.00 | 31.40 | 5.36 |
2510 | 2645 | 1.601759 | CATCGGTCATCCATGGGCC | 60.602 | 63.158 | 13.02 | 8.55 | 0.00 | 5.80 |
2511 | 2646 | 2.833913 | ATCGGTCATCCATGGGCCC | 61.834 | 63.158 | 17.59 | 17.59 | 0.00 | 5.80 |
2512 | 2647 | 4.935495 | CGGTCATCCATGGGCCCG | 62.935 | 72.222 | 19.37 | 14.09 | 0.00 | 6.13 |
2514 | 2649 | 4.195334 | GTCATCCATGGGCCCGCT | 62.195 | 66.667 | 19.37 | 3.52 | 0.00 | 5.52 |
2515 | 2650 | 2.447572 | TCATCCATGGGCCCGCTA | 60.448 | 61.111 | 19.37 | 0.00 | 0.00 | 4.26 |
2516 | 2651 | 2.075566 | TCATCCATGGGCCCGCTAA | 61.076 | 57.895 | 19.37 | 0.00 | 0.00 | 3.09 |
2517 | 2652 | 1.898574 | CATCCATGGGCCCGCTAAC | 60.899 | 63.158 | 19.37 | 0.00 | 0.00 | 2.34 |
2518 | 2653 | 2.382770 | ATCCATGGGCCCGCTAACA | 61.383 | 57.895 | 19.37 | 0.00 | 0.00 | 2.41 |
2519 | 2654 | 2.624674 | ATCCATGGGCCCGCTAACAC | 62.625 | 60.000 | 19.37 | 0.00 | 0.00 | 3.32 |
2520 | 2655 | 2.828549 | CATGGGCCCGCTAACACC | 60.829 | 66.667 | 19.37 | 0.00 | 0.00 | 4.16 |
2521 | 2656 | 3.334891 | ATGGGCCCGCTAACACCA | 61.335 | 61.111 | 19.37 | 0.00 | 35.39 | 4.17 |
2522 | 2657 | 3.344137 | ATGGGCCCGCTAACACCAG | 62.344 | 63.158 | 19.37 | 0.00 | 34.23 | 4.00 |
2530 | 2665 | 2.624169 | GCTAACACCAGCGTTTCCA | 58.376 | 52.632 | 0.00 | 0.00 | 0.00 | 3.53 |
2531 | 2666 | 0.517316 | GCTAACACCAGCGTTTCCAG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2532 | 2667 | 0.517316 | CTAACACCAGCGTTTCCAGC | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2533 | 2668 | 0.887387 | TAACACCAGCGTTTCCAGCC | 60.887 | 55.000 | 0.00 | 0.00 | 34.64 | 4.85 |
2534 | 2669 | 3.365265 | CACCAGCGTTTCCAGCCC | 61.365 | 66.667 | 0.00 | 0.00 | 34.64 | 5.19 |
2535 | 2670 | 3.884774 | ACCAGCGTTTCCAGCCCA | 61.885 | 61.111 | 0.00 | 0.00 | 34.64 | 5.36 |
2536 | 2671 | 3.365265 | CCAGCGTTTCCAGCCCAC | 61.365 | 66.667 | 0.00 | 0.00 | 34.64 | 4.61 |
2537 | 2672 | 3.365265 | CAGCGTTTCCAGCCCACC | 61.365 | 66.667 | 0.00 | 0.00 | 34.64 | 4.61 |
2538 | 2673 | 3.884774 | AGCGTTTCCAGCCCACCA | 61.885 | 61.111 | 0.00 | 0.00 | 34.64 | 4.17 |
2539 | 2674 | 2.909965 | GCGTTTCCAGCCCACCAA | 60.910 | 61.111 | 0.00 | 0.00 | 0.00 | 3.67 |
2540 | 2675 | 3.039134 | CGTTTCCAGCCCACCAAC | 58.961 | 61.111 | 0.00 | 0.00 | 0.00 | 3.77 |
2541 | 2676 | 2.561037 | CGTTTCCAGCCCACCAACC | 61.561 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2 | 3 | 4.774200 | AGCTCTTGTGGCCAAATTTTAGAT | 59.226 | 37.500 | 7.24 | 0.00 | 0.00 | 1.98 |
20 | 21 | 7.617041 | ATCTTTTACGAATTGCTAAAGCTCT | 57.383 | 32.000 | 3.26 | 0.00 | 42.66 | 4.09 |
94 | 96 | 4.642885 | TGATTTTGGTTCGTCTTCCTTGTT | 59.357 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
143 | 145 | 6.005823 | ACCCTGTAAAACCCTATGTGTTTAC | 58.994 | 40.000 | 0.00 | 0.00 | 34.97 | 2.01 |
152 | 154 | 5.786457 | TCTATGAACACCCTGTAAAACCCTA | 59.214 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
154 | 156 | 4.698780 | GTCTATGAACACCCTGTAAAACCC | 59.301 | 45.833 | 0.00 | 0.00 | 0.00 | 4.11 |
157 | 159 | 6.042781 | ACAGAGTCTATGAACACCCTGTAAAA | 59.957 | 38.462 | 0.43 | 0.00 | 0.00 | 1.52 |
163 | 165 | 3.100671 | GGACAGAGTCTATGAACACCCT | 58.899 | 50.000 | 0.43 | 0.00 | 32.47 | 4.34 |
164 | 166 | 2.832129 | TGGACAGAGTCTATGAACACCC | 59.168 | 50.000 | 0.43 | 0.00 | 32.47 | 4.61 |
166 | 168 | 5.140747 | AGTTGGACAGAGTCTATGAACAC | 57.859 | 43.478 | 0.43 | 0.00 | 32.47 | 3.32 |
171 | 173 | 7.797819 | GTTTGTTAAGTTGGACAGAGTCTATG | 58.202 | 38.462 | 0.00 | 0.00 | 32.47 | 2.23 |
441 | 443 | 2.372172 | CAGGGTTGTTAGAGGTGGAGTT | 59.628 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
442 | 444 | 1.978580 | CAGGGTTGTTAGAGGTGGAGT | 59.021 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
443 | 445 | 1.978580 | ACAGGGTTGTTAGAGGTGGAG | 59.021 | 52.381 | 0.00 | 0.00 | 32.28 | 3.86 |
444 | 446 | 2.112279 | ACAGGGTTGTTAGAGGTGGA | 57.888 | 50.000 | 0.00 | 0.00 | 32.28 | 4.02 |
445 | 447 | 4.041198 | TCTTTACAGGGTTGTTAGAGGTGG | 59.959 | 45.833 | 0.00 | 0.00 | 38.76 | 4.61 |
469 | 483 | 1.795768 | ACAATGCTACACACACGGAG | 58.204 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
554 | 568 | 6.882140 | TGGTGAGTGTACTCTCAAAAGAAAAA | 59.118 | 34.615 | 24.97 | 6.25 | 44.48 | 1.94 |
567 | 581 | 4.706842 | AAGGTTGAATGGTGAGTGTACT | 57.293 | 40.909 | 0.00 | 0.00 | 0.00 | 2.73 |
602 | 620 | 3.368739 | CCATTGGAAAAGACTTGGATGGC | 60.369 | 47.826 | 0.00 | 0.00 | 0.00 | 4.40 |
676 | 694 | 7.919690 | TCAGTTGAATGTTAAGTTTGTCTCAG | 58.080 | 34.615 | 0.00 | 0.00 | 0.00 | 3.35 |
865 | 926 | 1.212688 | TCCCCCATCAAGCATGTGTAG | 59.787 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
1099 | 1172 | 4.738998 | CGGGTGGCCATGGAAGCA | 62.739 | 66.667 | 18.40 | 0.00 | 0.00 | 3.91 |
1298 | 1374 | 1.006805 | CATCATCGTCCTCCTCGCC | 60.007 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
1312 | 1391 | 1.154093 | GAAGTCGCCGTCGTCATCA | 60.154 | 57.895 | 0.00 | 0.00 | 36.96 | 3.07 |
1315 | 1394 | 1.081641 | GAAGAAGTCGCCGTCGTCA | 60.082 | 57.895 | 0.33 | 0.00 | 36.96 | 4.35 |
1467 | 1567 | 0.458025 | AATTTCTCGACCGAGCCGAC | 60.458 | 55.000 | 14.00 | 0.00 | 41.71 | 4.79 |
1475 | 1575 | 5.032220 | ACGAAACAACAAAATTTCTCGACC | 58.968 | 37.500 | 0.00 | 0.00 | 33.49 | 4.79 |
1577 | 1694 | 5.422214 | AGCTGTAATTTAGGCACTACAGT | 57.578 | 39.130 | 9.20 | 0.00 | 42.67 | 3.55 |
1578 | 1695 | 5.874810 | TCAAGCTGTAATTTAGGCACTACAG | 59.125 | 40.000 | 4.15 | 4.15 | 42.67 | 2.74 |
1585 | 1703 | 5.064707 | TGACGATTCAAGCTGTAATTTAGGC | 59.935 | 40.000 | 0.00 | 0.00 | 0.00 | 3.93 |
1594 | 1712 | 8.816640 | AAATTAAAATTGACGATTCAAGCTGT | 57.183 | 26.923 | 0.00 | 0.00 | 45.07 | 4.40 |
1670 | 1795 | 3.518992 | TCCTTTCCCCGTTCAATTCTT | 57.481 | 42.857 | 0.00 | 0.00 | 0.00 | 2.52 |
1822 | 1953 | 6.486657 | ACCACATGAGATTCTCGAAAGAAAAA | 59.513 | 34.615 | 9.07 | 0.00 | 44.49 | 1.94 |
1823 | 1954 | 5.997746 | ACCACATGAGATTCTCGAAAGAAAA | 59.002 | 36.000 | 9.07 | 0.00 | 44.49 | 2.29 |
1824 | 1955 | 5.551233 | ACCACATGAGATTCTCGAAAGAAA | 58.449 | 37.500 | 9.07 | 0.00 | 44.49 | 2.52 |
1825 | 1956 | 5.152623 | ACCACATGAGATTCTCGAAAGAA | 57.847 | 39.130 | 9.07 | 0.00 | 45.36 | 2.52 |
1826 | 1957 | 4.808414 | ACCACATGAGATTCTCGAAAGA | 57.192 | 40.909 | 9.07 | 0.00 | 39.12 | 2.52 |
1827 | 1958 | 4.692625 | ACAACCACATGAGATTCTCGAAAG | 59.307 | 41.667 | 9.07 | 1.88 | 32.35 | 2.62 |
1886 | 2020 | 4.856801 | CCTTGCCCGGATCCCGTG | 62.857 | 72.222 | 0.73 | 0.00 | 46.80 | 4.94 |
1940 | 2074 | 1.025812 | GTAGAGCTTCAGCCTCGCTA | 58.974 | 55.000 | 0.00 | 0.00 | 43.38 | 4.26 |
2016 | 2151 | 3.426292 | GCTTCAAGAGGGTAAAATCGTGC | 60.426 | 47.826 | 0.00 | 0.00 | 0.00 | 5.34 |
2058 | 2193 | 1.000060 | TGTCATCCTTTGCTTTGCTGC | 60.000 | 47.619 | 0.00 | 0.00 | 0.00 | 5.25 |
2059 | 2194 | 3.054878 | GTTGTCATCCTTTGCTTTGCTG | 58.945 | 45.455 | 0.00 | 0.00 | 0.00 | 4.41 |
2060 | 2195 | 2.694628 | TGTTGTCATCCTTTGCTTTGCT | 59.305 | 40.909 | 0.00 | 0.00 | 0.00 | 3.91 |
2061 | 2196 | 2.796593 | GTGTTGTCATCCTTTGCTTTGC | 59.203 | 45.455 | 0.00 | 0.00 | 0.00 | 3.68 |
2062 | 2197 | 3.044986 | CGTGTTGTCATCCTTTGCTTTG | 58.955 | 45.455 | 0.00 | 0.00 | 0.00 | 2.77 |
2064 | 2199 | 1.001378 | GCGTGTTGTCATCCTTTGCTT | 60.001 | 47.619 | 0.00 | 0.00 | 0.00 | 3.91 |
2065 | 2200 | 0.593128 | GCGTGTTGTCATCCTTTGCT | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2066 | 2201 | 0.725784 | CGCGTGTTGTCATCCTTTGC | 60.726 | 55.000 | 0.00 | 0.00 | 0.00 | 3.68 |
2067 | 2202 | 0.110238 | CCGCGTGTTGTCATCCTTTG | 60.110 | 55.000 | 4.92 | 0.00 | 0.00 | 2.77 |
2068 | 2203 | 0.534203 | ACCGCGTGTTGTCATCCTTT | 60.534 | 50.000 | 4.92 | 0.00 | 0.00 | 3.11 |
2075 | 2210 | 1.007038 | TCTACCACCGCGTGTTGTC | 60.007 | 57.895 | 4.92 | 0.00 | 0.00 | 3.18 |
2076 | 2211 | 1.006571 | CTCTACCACCGCGTGTTGT | 60.007 | 57.895 | 4.92 | 7.49 | 0.00 | 3.32 |
2105 | 2240 | 8.572185 | TCGAATCATAGTGTTCCATTTCAAAAA | 58.428 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
2106 | 2241 | 8.105097 | TCGAATCATAGTGTTCCATTTCAAAA | 57.895 | 30.769 | 0.00 | 0.00 | 0.00 | 2.44 |
2107 | 2242 | 7.680442 | TCGAATCATAGTGTTCCATTTCAAA | 57.320 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2108 | 2243 | 7.864108 | ATCGAATCATAGTGTTCCATTTCAA | 57.136 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2109 | 2244 | 7.984617 | TGTATCGAATCATAGTGTTCCATTTCA | 59.015 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2110 | 2245 | 8.365399 | TGTATCGAATCATAGTGTTCCATTTC | 57.635 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
2111 | 2246 | 8.908786 | ATGTATCGAATCATAGTGTTCCATTT | 57.091 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
2112 | 2247 | 8.908786 | AATGTATCGAATCATAGTGTTCCATT | 57.091 | 30.769 | 6.21 | 0.00 | 0.00 | 3.16 |
2113 | 2248 | 9.996554 | TTAATGTATCGAATCATAGTGTTCCAT | 57.003 | 29.630 | 6.21 | 0.00 | 0.00 | 3.41 |
2114 | 2249 | 9.256477 | GTTAATGTATCGAATCATAGTGTTCCA | 57.744 | 33.333 | 6.21 | 0.00 | 0.00 | 3.53 |
2115 | 2250 | 8.709646 | GGTTAATGTATCGAATCATAGTGTTCC | 58.290 | 37.037 | 6.21 | 2.24 | 0.00 | 3.62 |
2116 | 2251 | 9.256477 | TGGTTAATGTATCGAATCATAGTGTTC | 57.744 | 33.333 | 6.21 | 0.00 | 0.00 | 3.18 |
2117 | 2252 | 9.261180 | CTGGTTAATGTATCGAATCATAGTGTT | 57.739 | 33.333 | 6.21 | 0.00 | 0.00 | 3.32 |
2118 | 2253 | 7.872993 | CCTGGTTAATGTATCGAATCATAGTGT | 59.127 | 37.037 | 6.21 | 0.00 | 0.00 | 3.55 |
2119 | 2254 | 7.872993 | ACCTGGTTAATGTATCGAATCATAGTG | 59.127 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
2120 | 2255 | 7.963532 | ACCTGGTTAATGTATCGAATCATAGT | 58.036 | 34.615 | 0.00 | 0.00 | 0.00 | 2.12 |
2121 | 2256 | 7.545965 | GGACCTGGTTAATGTATCGAATCATAG | 59.454 | 40.741 | 0.00 | 1.36 | 0.00 | 2.23 |
2122 | 2257 | 7.015779 | TGGACCTGGTTAATGTATCGAATCATA | 59.984 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
2123 | 2258 | 6.183361 | TGGACCTGGTTAATGTATCGAATCAT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.45 |
2124 | 2259 | 5.129650 | TGGACCTGGTTAATGTATCGAATCA | 59.870 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2125 | 2260 | 5.607477 | TGGACCTGGTTAATGTATCGAATC | 58.393 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
2126 | 2261 | 5.611374 | CTGGACCTGGTTAATGTATCGAAT | 58.389 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
2127 | 2262 | 4.682320 | GCTGGACCTGGTTAATGTATCGAA | 60.682 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
2128 | 2263 | 3.181469 | GCTGGACCTGGTTAATGTATCGA | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 3.59 |
2129 | 2264 | 3.131396 | GCTGGACCTGGTTAATGTATCG | 58.869 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2130 | 2265 | 3.118038 | TGGCTGGACCTGGTTAATGTATC | 60.118 | 47.826 | 0.00 | 0.00 | 40.22 | 2.24 |
2131 | 2266 | 2.849943 | TGGCTGGACCTGGTTAATGTAT | 59.150 | 45.455 | 0.00 | 0.00 | 40.22 | 2.29 |
2132 | 2267 | 2.238646 | CTGGCTGGACCTGGTTAATGTA | 59.761 | 50.000 | 0.00 | 0.00 | 40.22 | 2.29 |
2133 | 2268 | 1.004745 | CTGGCTGGACCTGGTTAATGT | 59.995 | 52.381 | 0.00 | 0.00 | 40.22 | 2.71 |
2134 | 2269 | 1.755179 | CTGGCTGGACCTGGTTAATG | 58.245 | 55.000 | 0.00 | 0.00 | 40.22 | 1.90 |
2160 | 2295 | 0.734942 | ATGTAAGTGTTCGACGGGCG | 60.735 | 55.000 | 0.00 | 0.00 | 42.69 | 6.13 |
2161 | 2296 | 0.997196 | GATGTAAGTGTTCGACGGGC | 59.003 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2162 | 2297 | 2.357327 | TGATGTAAGTGTTCGACGGG | 57.643 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
2163 | 2298 | 4.444388 | CCATATGATGTAAGTGTTCGACGG | 59.556 | 45.833 | 3.65 | 0.00 | 0.00 | 4.79 |
2164 | 2299 | 4.444388 | CCCATATGATGTAAGTGTTCGACG | 59.556 | 45.833 | 3.65 | 0.00 | 0.00 | 5.12 |
2165 | 2300 | 5.597806 | TCCCATATGATGTAAGTGTTCGAC | 58.402 | 41.667 | 3.65 | 0.00 | 0.00 | 4.20 |
2166 | 2301 | 5.221441 | CCTCCCATATGATGTAAGTGTTCGA | 60.221 | 44.000 | 3.65 | 0.00 | 0.00 | 3.71 |
2167 | 2302 | 4.991056 | CCTCCCATATGATGTAAGTGTTCG | 59.009 | 45.833 | 3.65 | 0.00 | 0.00 | 3.95 |
2168 | 2303 | 5.308825 | CCCTCCCATATGATGTAAGTGTTC | 58.691 | 45.833 | 3.65 | 0.00 | 0.00 | 3.18 |
2169 | 2304 | 4.446311 | GCCCTCCCATATGATGTAAGTGTT | 60.446 | 45.833 | 3.65 | 0.00 | 0.00 | 3.32 |
2170 | 2305 | 3.073062 | GCCCTCCCATATGATGTAAGTGT | 59.927 | 47.826 | 3.65 | 0.00 | 0.00 | 3.55 |
2171 | 2306 | 3.328931 | AGCCCTCCCATATGATGTAAGTG | 59.671 | 47.826 | 3.65 | 0.00 | 0.00 | 3.16 |
2172 | 2307 | 3.602608 | AGCCCTCCCATATGATGTAAGT | 58.397 | 45.455 | 3.65 | 0.00 | 0.00 | 2.24 |
2173 | 2308 | 4.042062 | TGAAGCCCTCCCATATGATGTAAG | 59.958 | 45.833 | 3.65 | 0.00 | 0.00 | 2.34 |
2174 | 2309 | 3.980022 | TGAAGCCCTCCCATATGATGTAA | 59.020 | 43.478 | 3.65 | 0.00 | 0.00 | 2.41 |
2175 | 2310 | 3.597182 | TGAAGCCCTCCCATATGATGTA | 58.403 | 45.455 | 3.65 | 0.00 | 0.00 | 2.29 |
2176 | 2311 | 2.421725 | TGAAGCCCTCCCATATGATGT | 58.578 | 47.619 | 3.65 | 0.00 | 0.00 | 3.06 |
2177 | 2312 | 3.181436 | ACTTGAAGCCCTCCCATATGATG | 60.181 | 47.826 | 3.65 | 0.00 | 0.00 | 3.07 |
2178 | 2313 | 3.059097 | ACTTGAAGCCCTCCCATATGAT | 58.941 | 45.455 | 3.65 | 0.00 | 0.00 | 2.45 |
2179 | 2314 | 2.439507 | GACTTGAAGCCCTCCCATATGA | 59.560 | 50.000 | 3.65 | 0.00 | 0.00 | 2.15 |
2180 | 2315 | 2.173356 | TGACTTGAAGCCCTCCCATATG | 59.827 | 50.000 | 0.00 | 0.00 | 0.00 | 1.78 |
2181 | 2316 | 2.492025 | TGACTTGAAGCCCTCCCATAT | 58.508 | 47.619 | 0.00 | 0.00 | 0.00 | 1.78 |
2182 | 2317 | 1.965414 | TGACTTGAAGCCCTCCCATA | 58.035 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2183 | 2318 | 1.302907 | ATGACTTGAAGCCCTCCCAT | 58.697 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2184 | 2319 | 1.965414 | TATGACTTGAAGCCCTCCCA | 58.035 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2185 | 2320 | 2.708325 | AGATATGACTTGAAGCCCTCCC | 59.292 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2186 | 2321 | 3.244387 | GGAGATATGACTTGAAGCCCTCC | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 4.30 |
2187 | 2322 | 3.244387 | GGGAGATATGACTTGAAGCCCTC | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 4.30 |
2188 | 2323 | 2.708325 | GGGAGATATGACTTGAAGCCCT | 59.292 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2189 | 2324 | 2.548920 | CGGGAGATATGACTTGAAGCCC | 60.549 | 54.545 | 0.00 | 0.00 | 0.00 | 5.19 |
2190 | 2325 | 2.365617 | TCGGGAGATATGACTTGAAGCC | 59.634 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2191 | 2326 | 3.735237 | TCGGGAGATATGACTTGAAGC | 57.265 | 47.619 | 0.00 | 0.00 | 0.00 | 3.86 |
2192 | 2327 | 5.011090 | TGTTCGGGAGATATGACTTGAAG | 57.989 | 43.478 | 0.00 | 0.00 | 39.57 | 3.02 |
2193 | 2328 | 5.175859 | GTTGTTCGGGAGATATGACTTGAA | 58.824 | 41.667 | 0.00 | 0.00 | 39.57 | 2.69 |
2194 | 2329 | 4.676986 | CGTTGTTCGGGAGATATGACTTGA | 60.677 | 45.833 | 0.00 | 0.00 | 39.57 | 3.02 |
2195 | 2330 | 3.551890 | CGTTGTTCGGGAGATATGACTTG | 59.448 | 47.826 | 0.00 | 0.00 | 39.57 | 3.16 |
2196 | 2331 | 3.446161 | TCGTTGTTCGGGAGATATGACTT | 59.554 | 43.478 | 0.00 | 0.00 | 39.57 | 3.01 |
2197 | 2332 | 3.021695 | TCGTTGTTCGGGAGATATGACT | 58.978 | 45.455 | 0.00 | 0.00 | 39.57 | 3.41 |
2198 | 2333 | 3.372954 | CTCGTTGTTCGGGAGATATGAC | 58.627 | 50.000 | 0.00 | 0.00 | 43.64 | 3.06 |
2199 | 2334 | 2.361119 | CCTCGTTGTTCGGGAGATATGA | 59.639 | 50.000 | 0.00 | 0.00 | 43.64 | 2.15 |
2200 | 2335 | 2.743938 | CCTCGTTGTTCGGGAGATATG | 58.256 | 52.381 | 0.00 | 0.00 | 43.64 | 1.78 |
2201 | 2336 | 1.068741 | GCCTCGTTGTTCGGGAGATAT | 59.931 | 52.381 | 0.00 | 0.00 | 43.64 | 1.63 |
2202 | 2337 | 0.458669 | GCCTCGTTGTTCGGGAGATA | 59.541 | 55.000 | 0.00 | 0.00 | 43.64 | 1.98 |
2203 | 2338 | 1.218316 | GCCTCGTTGTTCGGGAGAT | 59.782 | 57.895 | 0.00 | 0.00 | 43.64 | 2.75 |
2204 | 2339 | 2.654877 | GCCTCGTTGTTCGGGAGA | 59.345 | 61.111 | 0.00 | 0.00 | 43.64 | 3.71 |
2205 | 2340 | 2.809601 | CGCCTCGTTGTTCGGGAG | 60.810 | 66.667 | 0.00 | 0.00 | 43.64 | 4.30 |
2208 | 2343 | 2.604174 | AAAGCGCCTCGTTGTTCGG | 61.604 | 57.895 | 2.29 | 0.00 | 40.32 | 4.30 |
2209 | 2344 | 1.438710 | CAAAGCGCCTCGTTGTTCG | 60.439 | 57.895 | 2.29 | 0.00 | 41.41 | 3.95 |
2210 | 2345 | 1.725973 | GCAAAGCGCCTCGTTGTTC | 60.726 | 57.895 | 2.29 | 0.00 | 36.68 | 3.18 |
2211 | 2346 | 2.117941 | GAGCAAAGCGCCTCGTTGTT | 62.118 | 55.000 | 2.29 | 1.36 | 44.04 | 2.83 |
2212 | 2347 | 2.591715 | AGCAAAGCGCCTCGTTGT | 60.592 | 55.556 | 2.29 | 0.00 | 44.04 | 3.32 |
2213 | 2348 | 2.174349 | GAGCAAAGCGCCTCGTTG | 59.826 | 61.111 | 2.29 | 4.99 | 44.04 | 4.10 |
2214 | 2349 | 3.050275 | GGAGCAAAGCGCCTCGTT | 61.050 | 61.111 | 2.29 | 0.00 | 44.91 | 3.85 |
2228 | 2363 | 1.208614 | GCTGTCGCTGCTTTTGGAG | 59.791 | 57.895 | 0.00 | 0.00 | 41.13 | 3.86 |
2229 | 2364 | 0.890542 | ATGCTGTCGCTGCTTTTGGA | 60.891 | 50.000 | 0.00 | 0.00 | 36.97 | 3.53 |
2230 | 2365 | 0.731514 | CATGCTGTCGCTGCTTTTGG | 60.732 | 55.000 | 0.00 | 0.00 | 36.97 | 3.28 |
2231 | 2366 | 0.239082 | TCATGCTGTCGCTGCTTTTG | 59.761 | 50.000 | 0.00 | 5.82 | 36.97 | 2.44 |
2232 | 2367 | 0.953727 | TTCATGCTGTCGCTGCTTTT | 59.046 | 45.000 | 0.00 | 0.00 | 36.97 | 2.27 |
2233 | 2368 | 0.239347 | GTTCATGCTGTCGCTGCTTT | 59.761 | 50.000 | 0.00 | 0.00 | 36.97 | 3.51 |
2234 | 2369 | 0.604780 | AGTTCATGCTGTCGCTGCTT | 60.605 | 50.000 | 0.00 | 2.16 | 36.97 | 3.91 |
2235 | 2370 | 0.247460 | TAGTTCATGCTGTCGCTGCT | 59.753 | 50.000 | 0.00 | 0.00 | 36.97 | 4.24 |
2236 | 2371 | 1.078709 | TTAGTTCATGCTGTCGCTGC | 58.921 | 50.000 | 0.00 | 0.00 | 36.97 | 5.25 |
2237 | 2372 | 3.371898 | TGATTTAGTTCATGCTGTCGCTG | 59.628 | 43.478 | 0.00 | 0.00 | 36.97 | 5.18 |
2238 | 2373 | 3.599343 | TGATTTAGTTCATGCTGTCGCT | 58.401 | 40.909 | 0.00 | 0.00 | 36.97 | 4.93 |
2239 | 2374 | 4.542662 | ATGATTTAGTTCATGCTGTCGC | 57.457 | 40.909 | 0.00 | 0.00 | 35.05 | 5.19 |
2240 | 2375 | 7.003939 | TGTAATGATTTAGTTCATGCTGTCG | 57.996 | 36.000 | 0.00 | 0.00 | 36.48 | 4.35 |
2241 | 2376 | 7.698130 | GGTTGTAATGATTTAGTTCATGCTGTC | 59.302 | 37.037 | 0.00 | 0.00 | 36.48 | 3.51 |
2242 | 2377 | 7.362920 | GGGTTGTAATGATTTAGTTCATGCTGT | 60.363 | 37.037 | 0.00 | 0.00 | 36.48 | 4.40 |
2243 | 2378 | 6.974622 | GGGTTGTAATGATTTAGTTCATGCTG | 59.025 | 38.462 | 0.00 | 0.00 | 36.48 | 4.41 |
2244 | 2379 | 6.096846 | GGGGTTGTAATGATTTAGTTCATGCT | 59.903 | 38.462 | 0.00 | 0.00 | 36.48 | 3.79 |
2245 | 2380 | 6.096846 | AGGGGTTGTAATGATTTAGTTCATGC | 59.903 | 38.462 | 0.00 | 0.00 | 36.48 | 4.06 |
2246 | 2381 | 7.645058 | AGGGGTTGTAATGATTTAGTTCATG | 57.355 | 36.000 | 0.00 | 0.00 | 36.48 | 3.07 |
2247 | 2382 | 7.124147 | CCAAGGGGTTGTAATGATTTAGTTCAT | 59.876 | 37.037 | 0.00 | 0.00 | 37.96 | 2.57 |
2248 | 2383 | 6.435904 | CCAAGGGGTTGTAATGATTTAGTTCA | 59.564 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
2249 | 2384 | 6.127451 | CCCAAGGGGTTGTAATGATTTAGTTC | 60.127 | 42.308 | 0.00 | 0.00 | 38.25 | 3.01 |
2250 | 2385 | 5.719563 | CCCAAGGGGTTGTAATGATTTAGTT | 59.280 | 40.000 | 0.00 | 0.00 | 38.25 | 2.24 |
2251 | 2386 | 5.269189 | CCCAAGGGGTTGTAATGATTTAGT | 58.731 | 41.667 | 0.00 | 0.00 | 38.25 | 2.24 |
2252 | 2387 | 5.852282 | CCCAAGGGGTTGTAATGATTTAG | 57.148 | 43.478 | 0.00 | 0.00 | 38.25 | 1.85 |
2268 | 2403 | 1.686355 | TTGCGTAATATGCCCCAAGG | 58.314 | 50.000 | 1.60 | 0.00 | 0.00 | 3.61 |
2269 | 2404 | 2.228822 | GGATTGCGTAATATGCCCCAAG | 59.771 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
2270 | 2405 | 2.235016 | GGATTGCGTAATATGCCCCAA | 58.765 | 47.619 | 0.00 | 0.00 | 0.00 | 4.12 |
2271 | 2406 | 1.546773 | GGGATTGCGTAATATGCCCCA | 60.547 | 52.381 | 13.64 | 0.00 | 30.57 | 4.96 |
2272 | 2407 | 1.173913 | GGGATTGCGTAATATGCCCC | 58.826 | 55.000 | 9.53 | 7.43 | 0.00 | 5.80 |
2273 | 2408 | 0.802494 | CGGGATTGCGTAATATGCCC | 59.198 | 55.000 | 10.38 | 10.38 | 0.00 | 5.36 |
2274 | 2409 | 0.802494 | CCGGGATTGCGTAATATGCC | 59.198 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2275 | 2410 | 0.802494 | CCCGGGATTGCGTAATATGC | 59.198 | 55.000 | 18.48 | 0.00 | 0.00 | 3.14 |
2276 | 2411 | 2.073816 | GTCCCGGGATTGCGTAATATG | 58.926 | 52.381 | 29.73 | 0.00 | 0.00 | 1.78 |
2277 | 2412 | 1.002773 | GGTCCCGGGATTGCGTAATAT | 59.997 | 52.381 | 29.73 | 0.00 | 0.00 | 1.28 |
2278 | 2413 | 0.393820 | GGTCCCGGGATTGCGTAATA | 59.606 | 55.000 | 29.73 | 0.00 | 0.00 | 0.98 |
2279 | 2414 | 1.147600 | GGTCCCGGGATTGCGTAAT | 59.852 | 57.895 | 29.73 | 0.00 | 0.00 | 1.89 |
2280 | 2415 | 2.585698 | GGTCCCGGGATTGCGTAA | 59.414 | 61.111 | 29.73 | 0.00 | 0.00 | 3.18 |
2281 | 2416 | 3.840594 | CGGTCCCGGGATTGCGTA | 61.841 | 66.667 | 29.73 | 0.00 | 35.56 | 4.42 |
2284 | 2419 | 3.178540 | ATAGCGGTCCCGGGATTGC | 62.179 | 63.158 | 31.85 | 31.85 | 40.19 | 3.56 |
2285 | 2420 | 1.004918 | GATAGCGGTCCCGGGATTG | 60.005 | 63.158 | 29.73 | 22.90 | 40.19 | 2.67 |
2286 | 2421 | 1.458777 | TGATAGCGGTCCCGGGATT | 60.459 | 57.895 | 29.73 | 15.30 | 40.19 | 3.01 |
2287 | 2422 | 2.200370 | TGATAGCGGTCCCGGGAT | 59.800 | 61.111 | 29.73 | 13.79 | 40.19 | 3.85 |
2288 | 2423 | 2.836360 | GTGATAGCGGTCCCGGGA | 60.836 | 66.667 | 22.63 | 22.63 | 40.19 | 5.14 |
2289 | 2424 | 3.925090 | GGTGATAGCGGTCCCGGG | 61.925 | 72.222 | 16.85 | 16.85 | 40.19 | 5.73 |
2290 | 2425 | 3.151710 | TGGTGATAGCGGTCCCGG | 61.152 | 66.667 | 7.97 | 0.00 | 40.19 | 5.73 |
2291 | 2426 | 2.417516 | CTGGTGATAGCGGTCCCG | 59.582 | 66.667 | 0.24 | 0.24 | 43.09 | 5.14 |
2292 | 2427 | 2.109181 | GCTGGTGATAGCGGTCCC | 59.891 | 66.667 | 0.00 | 0.00 | 33.46 | 4.46 |
2298 | 2433 | 1.060698 | GTCGAAAACGCTGGTGATAGC | 59.939 | 52.381 | 0.00 | 0.00 | 40.29 | 2.97 |
2299 | 2434 | 1.659098 | GGTCGAAAACGCTGGTGATAG | 59.341 | 52.381 | 0.00 | 0.00 | 0.00 | 2.08 |
2300 | 2435 | 1.673626 | GGGTCGAAAACGCTGGTGATA | 60.674 | 52.381 | 0.00 | 0.00 | 37.81 | 2.15 |
2301 | 2436 | 0.953960 | GGGTCGAAAACGCTGGTGAT | 60.954 | 55.000 | 0.00 | 0.00 | 37.81 | 3.06 |
2302 | 2437 | 1.595929 | GGGTCGAAAACGCTGGTGA | 60.596 | 57.895 | 0.00 | 0.00 | 37.81 | 4.02 |
2303 | 2438 | 1.890041 | TGGGTCGAAAACGCTGGTG | 60.890 | 57.895 | 0.00 | 0.00 | 41.27 | 4.17 |
2304 | 2439 | 1.890510 | GTGGGTCGAAAACGCTGGT | 60.891 | 57.895 | 0.00 | 0.00 | 41.27 | 4.00 |
2305 | 2440 | 1.234615 | ATGTGGGTCGAAAACGCTGG | 61.235 | 55.000 | 0.00 | 0.00 | 41.27 | 4.85 |
2306 | 2441 | 0.110238 | CATGTGGGTCGAAAACGCTG | 60.110 | 55.000 | 0.00 | 0.00 | 41.27 | 5.18 |
2307 | 2442 | 1.852067 | GCATGTGGGTCGAAAACGCT | 61.852 | 55.000 | 0.00 | 0.00 | 41.27 | 5.07 |
2308 | 2443 | 1.442017 | GCATGTGGGTCGAAAACGC | 60.442 | 57.895 | 0.00 | 0.00 | 41.08 | 4.84 |
2309 | 2444 | 1.154488 | CGCATGTGGGTCGAAAACG | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 3.60 |
2310 | 2445 | 0.110373 | GACGCATGTGGGTCGAAAAC | 60.110 | 55.000 | 11.65 | 0.00 | 45.66 | 2.43 |
2311 | 2446 | 2.240230 | GACGCATGTGGGTCGAAAA | 58.760 | 52.632 | 11.65 | 0.00 | 45.66 | 2.29 |
2312 | 2447 | 3.960237 | GACGCATGTGGGTCGAAA | 58.040 | 55.556 | 11.65 | 0.00 | 45.66 | 3.46 |
2317 | 2452 | 0.324614 | TCTGATTGACGCATGTGGGT | 59.675 | 50.000 | 11.65 | 2.09 | 44.25 | 4.51 |
2318 | 2453 | 0.729116 | GTCTGATTGACGCATGTGGG | 59.271 | 55.000 | 11.65 | 0.00 | 35.81 | 4.61 |
2319 | 2454 | 0.729116 | GGTCTGATTGACGCATGTGG | 59.271 | 55.000 | 11.65 | 0.00 | 46.24 | 4.17 |
2326 | 2461 | 1.019278 | CCGGTTGGGTCTGATTGACG | 61.019 | 60.000 | 0.00 | 0.00 | 46.24 | 4.35 |
2327 | 2462 | 0.323629 | TCCGGTTGGGTCTGATTGAC | 59.676 | 55.000 | 0.00 | 0.00 | 44.63 | 3.18 |
2328 | 2463 | 0.613260 | CTCCGGTTGGGTCTGATTGA | 59.387 | 55.000 | 0.00 | 0.00 | 37.00 | 2.57 |
2329 | 2464 | 0.613260 | TCTCCGGTTGGGTCTGATTG | 59.387 | 55.000 | 0.00 | 0.00 | 37.00 | 2.67 |
2330 | 2465 | 0.905357 | CTCTCCGGTTGGGTCTGATT | 59.095 | 55.000 | 0.00 | 0.00 | 37.00 | 2.57 |
2331 | 2466 | 1.617947 | GCTCTCCGGTTGGGTCTGAT | 61.618 | 60.000 | 0.00 | 0.00 | 37.00 | 2.90 |
2332 | 2467 | 2.283529 | GCTCTCCGGTTGGGTCTGA | 61.284 | 63.158 | 0.00 | 0.00 | 37.00 | 3.27 |
2333 | 2468 | 2.111999 | TTGCTCTCCGGTTGGGTCTG | 62.112 | 60.000 | 0.00 | 0.00 | 37.00 | 3.51 |
2334 | 2469 | 1.841556 | TTGCTCTCCGGTTGGGTCT | 60.842 | 57.895 | 0.00 | 0.00 | 37.00 | 3.85 |
2335 | 2470 | 1.671379 | GTTGCTCTCCGGTTGGGTC | 60.671 | 63.158 | 0.00 | 0.00 | 37.00 | 4.46 |
2336 | 2471 | 2.430367 | GTTGCTCTCCGGTTGGGT | 59.570 | 61.111 | 0.00 | 0.00 | 37.00 | 4.51 |
2337 | 2472 | 1.966451 | GTGTTGCTCTCCGGTTGGG | 60.966 | 63.158 | 0.00 | 0.00 | 35.24 | 4.12 |
2338 | 2473 | 1.966451 | GGTGTTGCTCTCCGGTTGG | 60.966 | 63.158 | 0.00 | 0.00 | 0.00 | 3.77 |
2339 | 2474 | 2.317609 | CGGTGTTGCTCTCCGGTTG | 61.318 | 63.158 | 0.00 | 0.00 | 45.75 | 3.77 |
2340 | 2475 | 2.030562 | CGGTGTTGCTCTCCGGTT | 59.969 | 61.111 | 0.00 | 0.00 | 45.75 | 4.44 |
2344 | 2479 | 2.094182 | TCATAAGTCGGTGTTGCTCTCC | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2345 | 2480 | 2.924290 | GTCATAAGTCGGTGTTGCTCTC | 59.076 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
2346 | 2481 | 2.299013 | TGTCATAAGTCGGTGTTGCTCT | 59.701 | 45.455 | 0.00 | 0.00 | 0.00 | 4.09 |
2347 | 2482 | 2.668457 | CTGTCATAAGTCGGTGTTGCTC | 59.332 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2348 | 2483 | 2.612972 | CCTGTCATAAGTCGGTGTTGCT | 60.613 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2349 | 2484 | 1.732259 | CCTGTCATAAGTCGGTGTTGC | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
2350 | 2485 | 1.732259 | GCCTGTCATAAGTCGGTGTTG | 59.268 | 52.381 | 0.00 | 0.00 | 0.00 | 3.33 |
2351 | 2486 | 1.338769 | GGCCTGTCATAAGTCGGTGTT | 60.339 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
2352 | 2487 | 0.249398 | GGCCTGTCATAAGTCGGTGT | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2353 | 2488 | 0.537188 | AGGCCTGTCATAAGTCGGTG | 59.463 | 55.000 | 3.11 | 0.00 | 0.00 | 4.94 |
2354 | 2489 | 1.066143 | CAAGGCCTGTCATAAGTCGGT | 60.066 | 52.381 | 5.69 | 0.00 | 0.00 | 4.69 |
2355 | 2490 | 1.656652 | CAAGGCCTGTCATAAGTCGG | 58.343 | 55.000 | 5.69 | 0.00 | 0.00 | 4.79 |
2356 | 2491 | 1.656652 | CCAAGGCCTGTCATAAGTCG | 58.343 | 55.000 | 5.69 | 0.00 | 0.00 | 4.18 |
2357 | 2492 | 2.019156 | GCCCAAGGCCTGTCATAAGTC | 61.019 | 57.143 | 5.69 | 0.00 | 44.06 | 3.01 |
2358 | 2493 | 0.034089 | GCCCAAGGCCTGTCATAAGT | 60.034 | 55.000 | 5.69 | 0.00 | 44.06 | 2.24 |
2359 | 2494 | 2.799176 | GCCCAAGGCCTGTCATAAG | 58.201 | 57.895 | 5.69 | 0.00 | 44.06 | 1.73 |
2384 | 2519 | 0.698818 | ACAGGCTAGTCTTTTGGGGG | 59.301 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
2385 | 2520 | 2.586648 | AACAGGCTAGTCTTTTGGGG | 57.413 | 50.000 | 0.00 | 0.00 | 0.00 | 4.96 |
2386 | 2521 | 3.263425 | TCCTAACAGGCTAGTCTTTTGGG | 59.737 | 47.826 | 17.14 | 17.14 | 34.61 | 4.12 |
2387 | 2522 | 4.508662 | CTCCTAACAGGCTAGTCTTTTGG | 58.491 | 47.826 | 6.00 | 2.88 | 34.61 | 3.28 |
2388 | 2523 | 4.508662 | CCTCCTAACAGGCTAGTCTTTTG | 58.491 | 47.826 | 6.00 | 0.00 | 34.61 | 2.44 |
2389 | 2524 | 3.519913 | CCCTCCTAACAGGCTAGTCTTTT | 59.480 | 47.826 | 0.00 | 0.00 | 34.61 | 2.27 |
2390 | 2525 | 3.108376 | CCCTCCTAACAGGCTAGTCTTT | 58.892 | 50.000 | 0.00 | 0.00 | 34.61 | 2.52 |
2391 | 2526 | 2.627217 | CCCCTCCTAACAGGCTAGTCTT | 60.627 | 54.545 | 0.00 | 0.00 | 34.61 | 3.01 |
2392 | 2527 | 1.062810 | CCCCTCCTAACAGGCTAGTCT | 60.063 | 57.143 | 0.00 | 0.00 | 34.61 | 3.24 |
2393 | 2528 | 1.063114 | TCCCCTCCTAACAGGCTAGTC | 60.063 | 57.143 | 0.00 | 0.00 | 34.61 | 2.59 |
2394 | 2529 | 1.016415 | TCCCCTCCTAACAGGCTAGT | 58.984 | 55.000 | 0.00 | 0.00 | 34.61 | 2.57 |
2395 | 2530 | 1.343075 | TGTCCCCTCCTAACAGGCTAG | 60.343 | 57.143 | 0.00 | 0.00 | 34.61 | 3.42 |
2396 | 2531 | 0.714180 | TGTCCCCTCCTAACAGGCTA | 59.286 | 55.000 | 0.00 | 0.00 | 34.61 | 3.93 |
2397 | 2532 | 0.910088 | GTGTCCCCTCCTAACAGGCT | 60.910 | 60.000 | 0.00 | 0.00 | 34.61 | 4.58 |
2398 | 2533 | 1.602771 | GTGTCCCCTCCTAACAGGC | 59.397 | 63.158 | 0.00 | 0.00 | 34.61 | 4.85 |
2399 | 2534 | 2.297937 | GGTGTCCCCTCCTAACAGG | 58.702 | 63.158 | 0.00 | 0.00 | 36.46 | 4.00 |
2411 | 2546 | 1.347243 | TTATAAGGGCGGGGGTGTCC | 61.347 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
2412 | 2547 | 0.108019 | CTTATAAGGGCGGGGGTGTC | 59.892 | 60.000 | 4.42 | 0.00 | 0.00 | 3.67 |
2413 | 2548 | 0.622446 | ACTTATAAGGGCGGGGGTGT | 60.622 | 55.000 | 16.73 | 0.00 | 0.00 | 4.16 |
2414 | 2549 | 0.108019 | GACTTATAAGGGCGGGGGTG | 59.892 | 60.000 | 16.73 | 0.00 | 0.00 | 4.61 |
2415 | 2550 | 1.405272 | CGACTTATAAGGGCGGGGGT | 61.405 | 60.000 | 16.73 | 0.00 | 0.00 | 4.95 |
2416 | 2551 | 1.370064 | CGACTTATAAGGGCGGGGG | 59.630 | 63.158 | 16.73 | 0.00 | 0.00 | 5.40 |
2417 | 2552 | 0.249741 | CACGACTTATAAGGGCGGGG | 60.250 | 60.000 | 24.35 | 16.28 | 33.96 | 5.73 |
2418 | 2553 | 0.462789 | ACACGACTTATAAGGGCGGG | 59.537 | 55.000 | 22.67 | 22.67 | 37.36 | 6.13 |
2419 | 2554 | 2.304751 | AACACGACTTATAAGGGCGG | 57.695 | 50.000 | 24.35 | 18.04 | 33.96 | 6.13 |
2420 | 2555 | 5.751990 | AGAAATAACACGACTTATAAGGGCG | 59.248 | 40.000 | 21.15 | 21.15 | 35.18 | 6.13 |
2421 | 2556 | 6.202379 | GGAGAAATAACACGACTTATAAGGGC | 59.798 | 42.308 | 16.73 | 7.37 | 0.00 | 5.19 |
2422 | 2557 | 6.704937 | GGGAGAAATAACACGACTTATAAGGG | 59.295 | 42.308 | 16.73 | 10.26 | 0.00 | 3.95 |
2423 | 2558 | 6.704937 | GGGGAGAAATAACACGACTTATAAGG | 59.295 | 42.308 | 16.73 | 2.57 | 0.00 | 2.69 |
2424 | 2559 | 6.704937 | GGGGGAGAAATAACACGACTTATAAG | 59.295 | 42.308 | 11.05 | 11.05 | 0.00 | 1.73 |
2425 | 2560 | 6.585416 | GGGGGAGAAATAACACGACTTATAA | 58.415 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2426 | 2561 | 6.165700 | GGGGGAGAAATAACACGACTTATA | 57.834 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
2427 | 2562 | 5.032327 | GGGGGAGAAATAACACGACTTAT | 57.968 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
2428 | 2563 | 4.476628 | GGGGGAGAAATAACACGACTTA | 57.523 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
2429 | 2564 | 3.345508 | GGGGGAGAAATAACACGACTT | 57.654 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
2451 | 2586 | 3.497942 | GGGTTTAGTCCCACATCAGTTGT | 60.498 | 47.826 | 0.00 | 0.00 | 46.30 | 3.32 |
2452 | 2587 | 3.081804 | GGGTTTAGTCCCACATCAGTTG | 58.918 | 50.000 | 0.00 | 0.00 | 46.30 | 3.16 |
2453 | 2588 | 3.434940 | GGGTTTAGTCCCACATCAGTT | 57.565 | 47.619 | 0.00 | 0.00 | 46.30 | 3.16 |
2463 | 2598 | 3.353557 | GGGAGATTGTTGGGTTTAGTCC | 58.646 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2464 | 2599 | 3.353557 | GGGGAGATTGTTGGGTTTAGTC | 58.646 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2465 | 2600 | 2.042569 | GGGGGAGATTGTTGGGTTTAGT | 59.957 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2466 | 2601 | 2.311841 | AGGGGGAGATTGTTGGGTTTAG | 59.688 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2467 | 2602 | 2.310647 | GAGGGGGAGATTGTTGGGTTTA | 59.689 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2468 | 2603 | 1.077169 | GAGGGGGAGATTGTTGGGTTT | 59.923 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
2469 | 2604 | 0.704664 | GAGGGGGAGATTGTTGGGTT | 59.295 | 55.000 | 0.00 | 0.00 | 0.00 | 4.11 |
2470 | 2605 | 0.477597 | TGAGGGGGAGATTGTTGGGT | 60.478 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
2471 | 2606 | 0.034089 | GTGAGGGGGAGATTGTTGGG | 60.034 | 60.000 | 0.00 | 0.00 | 0.00 | 4.12 |
2472 | 2607 | 0.698238 | TGTGAGGGGGAGATTGTTGG | 59.302 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2473 | 2608 | 1.073763 | TGTGTGAGGGGGAGATTGTTG | 59.926 | 52.381 | 0.00 | 0.00 | 0.00 | 3.33 |
2474 | 2609 | 1.444933 | TGTGTGAGGGGGAGATTGTT | 58.555 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2475 | 2610 | 1.561542 | GATGTGTGAGGGGGAGATTGT | 59.438 | 52.381 | 0.00 | 0.00 | 0.00 | 2.71 |
2476 | 2611 | 1.473965 | CGATGTGTGAGGGGGAGATTG | 60.474 | 57.143 | 0.00 | 0.00 | 0.00 | 2.67 |
2477 | 2612 | 0.833287 | CGATGTGTGAGGGGGAGATT | 59.167 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2478 | 2613 | 1.050988 | CCGATGTGTGAGGGGGAGAT | 61.051 | 60.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2479 | 2614 | 1.685765 | CCGATGTGTGAGGGGGAGA | 60.686 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
2480 | 2615 | 1.961180 | GACCGATGTGTGAGGGGGAG | 61.961 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2481 | 2616 | 1.987855 | GACCGATGTGTGAGGGGGA | 60.988 | 63.158 | 0.00 | 0.00 | 0.00 | 4.81 |
2482 | 2617 | 1.626356 | ATGACCGATGTGTGAGGGGG | 61.626 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
2483 | 2618 | 0.179073 | GATGACCGATGTGTGAGGGG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2484 | 2619 | 0.179073 | GGATGACCGATGTGTGAGGG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2485 | 2620 | 0.536724 | TGGATGACCGATGTGTGAGG | 59.463 | 55.000 | 0.00 | 0.00 | 39.42 | 3.86 |
2486 | 2621 | 2.207590 | CATGGATGACCGATGTGTGAG | 58.792 | 52.381 | 0.00 | 0.00 | 39.42 | 3.51 |
2487 | 2622 | 1.134431 | CCATGGATGACCGATGTGTGA | 60.134 | 52.381 | 5.56 | 0.00 | 39.42 | 3.58 |
2488 | 2623 | 1.302366 | CCATGGATGACCGATGTGTG | 58.698 | 55.000 | 5.56 | 0.00 | 39.42 | 3.82 |
2489 | 2624 | 0.181114 | CCCATGGATGACCGATGTGT | 59.819 | 55.000 | 15.22 | 0.00 | 39.42 | 3.72 |
2490 | 2625 | 1.168407 | GCCCATGGATGACCGATGTG | 61.168 | 60.000 | 15.22 | 0.00 | 39.42 | 3.21 |
2491 | 2626 | 1.149174 | GCCCATGGATGACCGATGT | 59.851 | 57.895 | 15.22 | 0.00 | 39.42 | 3.06 |
2492 | 2627 | 1.601759 | GGCCCATGGATGACCGATG | 60.602 | 63.158 | 15.22 | 0.00 | 39.42 | 3.84 |
2493 | 2628 | 2.833913 | GGGCCCATGGATGACCGAT | 61.834 | 63.158 | 19.95 | 0.00 | 39.42 | 4.18 |
2494 | 2629 | 3.488569 | GGGCCCATGGATGACCGA | 61.489 | 66.667 | 19.95 | 0.00 | 39.42 | 4.69 |
2495 | 2630 | 4.935495 | CGGGCCCATGGATGACCG | 62.935 | 72.222 | 24.92 | 19.35 | 39.42 | 4.79 |
2497 | 2632 | 2.337879 | TTAGCGGGCCCATGGATGAC | 62.338 | 60.000 | 24.92 | 0.00 | 0.00 | 3.06 |
2498 | 2633 | 2.075566 | TTAGCGGGCCCATGGATGA | 61.076 | 57.895 | 24.92 | 0.00 | 0.00 | 2.92 |
2499 | 2634 | 1.898574 | GTTAGCGGGCCCATGGATG | 60.899 | 63.158 | 24.92 | 4.93 | 0.00 | 3.51 |
2500 | 2635 | 2.382770 | TGTTAGCGGGCCCATGGAT | 61.383 | 57.895 | 24.92 | 6.91 | 0.00 | 3.41 |
2501 | 2636 | 3.012119 | TGTTAGCGGGCCCATGGA | 61.012 | 61.111 | 24.92 | 0.89 | 0.00 | 3.41 |
2502 | 2637 | 2.828549 | GTGTTAGCGGGCCCATGG | 60.829 | 66.667 | 24.92 | 4.14 | 0.00 | 3.66 |
2503 | 2638 | 2.828549 | GGTGTTAGCGGGCCCATG | 60.829 | 66.667 | 24.92 | 7.60 | 0.00 | 3.66 |
2504 | 2639 | 3.334891 | TGGTGTTAGCGGGCCCAT | 61.335 | 61.111 | 24.92 | 12.72 | 0.00 | 4.00 |
2505 | 2640 | 4.028490 | CTGGTGTTAGCGGGCCCA | 62.028 | 66.667 | 24.92 | 0.00 | 0.00 | 5.36 |
2512 | 2647 | 0.517316 | CTGGAAACGCTGGTGTTAGC | 59.483 | 55.000 | 0.00 | 0.00 | 40.29 | 3.09 |
2513 | 2648 | 0.517316 | GCTGGAAACGCTGGTGTTAG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 2.34 |
2514 | 2649 | 0.887387 | GGCTGGAAACGCTGGTGTTA | 60.887 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2515 | 2650 | 2.193536 | GGCTGGAAACGCTGGTGTT | 61.194 | 57.895 | 0.00 | 0.00 | 0.00 | 3.32 |
2516 | 2651 | 2.594592 | GGCTGGAAACGCTGGTGT | 60.595 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
2517 | 2652 | 3.365265 | GGGCTGGAAACGCTGGTG | 61.365 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
2518 | 2653 | 3.884774 | TGGGCTGGAAACGCTGGT | 61.885 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
2519 | 2654 | 3.365265 | GTGGGCTGGAAACGCTGG | 61.365 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
2520 | 2655 | 3.365265 | GGTGGGCTGGAAACGCTG | 61.365 | 66.667 | 0.00 | 0.00 | 0.00 | 5.18 |
2521 | 2656 | 3.429372 | TTGGTGGGCTGGAAACGCT | 62.429 | 57.895 | 0.00 | 0.00 | 0.00 | 5.07 |
2522 | 2657 | 2.909965 | TTGGTGGGCTGGAAACGC | 60.910 | 61.111 | 0.00 | 0.00 | 0.00 | 4.84 |
2523 | 2658 | 2.561037 | GGTTGGTGGGCTGGAAACG | 61.561 | 63.158 | 0.00 | 0.00 | 0.00 | 3.60 |
2524 | 2659 | 3.455152 | GGTTGGTGGGCTGGAAAC | 58.545 | 61.111 | 0.00 | 0.00 | 0.00 | 2.78 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.