Multiple sequence alignment - TraesCS2B01G419300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G419300 chr2B 100.000 5825 0 0 1 5825 600751361 600745537 0.000000e+00 10757.0
1 TraesCS2B01G419300 chr2B 99.582 239 1 0 1 239 600773684 600773446 2.490000e-118 436.0
2 TraesCS2B01G419300 chr2B 82.667 450 52 7 240 663 447786912 447787361 5.510000e-100 375.0
3 TraesCS2B01G419300 chr2B 85.057 87 11 2 5586 5670 5060693 5060779 2.890000e-13 87.9
4 TraesCS2B01G419300 chr2B 88.235 51 4 2 5320 5369 754574874 754574825 6.300000e-05 60.2
5 TraesCS2B01G419300 chr2A 92.607 4477 238 51 1008 5446 654917782 654913361 0.000000e+00 6348.0
6 TraesCS2B01G419300 chr2A 94.355 248 13 1 1 248 195524341 195524095 4.260000e-101 379.0
7 TraesCS2B01G419300 chr2A 85.231 325 23 18 5508 5825 654913365 654913059 1.580000e-80 311.0
8 TraesCS2B01G419300 chr2A 89.231 195 19 2 687 879 654918089 654917895 5.830000e-60 243.0
9 TraesCS2B01G419300 chr2A 90.476 63 4 1 5600 5660 469455183 469455245 1.350000e-11 82.4
10 TraesCS2B01G419300 chr2D 87.757 1748 120 27 4103 5825 511695280 511693602 0.000000e+00 1956.0
11 TraesCS2B01G419300 chr2D 91.938 1414 82 12 2375 3774 511696857 511695462 0.000000e+00 1951.0
12 TraesCS2B01G419300 chr2D 92.593 1215 74 10 1086 2294 511698060 511696856 0.000000e+00 1731.0
13 TraesCS2B01G419300 chr2D 91.142 429 34 2 240 664 163026526 163026954 3.910000e-161 579.0
14 TraesCS2B01G419300 chr2D 87.500 248 22 4 687 925 511698832 511698585 1.600000e-70 278.0
15 TraesCS2B01G419300 chr2D 87.449 247 23 3 687 925 511755074 511754828 1.600000e-70 278.0
16 TraesCS2B01G419300 chr2D 82.883 111 11 7 554 660 332558816 332558922 6.220000e-15 93.5
17 TraesCS2B01G419300 chr2D 80.233 86 16 1 5590 5674 547882376 547882291 4.870000e-06 63.9
18 TraesCS2B01G419300 chr4B 90.796 402 25 4 240 631 599054174 599054573 1.440000e-145 527.0
19 TraesCS2B01G419300 chr4B 91.129 124 10 1 240 362 637790602 637790725 3.610000e-37 167.0
20 TraesCS2B01G419300 chr4B 74.242 462 65 37 242 664 55040440 55039994 1.690000e-30 145.0
21 TraesCS2B01G419300 chr7B 88.124 421 50 0 240 660 205162530 205162950 8.710000e-138 501.0
22 TraesCS2B01G419300 chr7B 94.624 93 3 2 2293 2384 639796199 639796290 6.080000e-30 143.0
23 TraesCS2B01G419300 chr5D 85.746 449 38 8 240 663 494254481 494254928 8.900000e-123 451.0
24 TraesCS2B01G419300 chr5D 93.000 100 3 4 2278 2376 128577576 128577672 6.080000e-30 143.0
25 TraesCS2B01G419300 chr5D 86.250 80 10 1 5596 5674 312136152 312136073 1.040000e-12 86.1
26 TraesCS2B01G419300 chr5D 83.951 81 10 3 5592 5670 442502110 442502189 2.250000e-09 75.0
27 TraesCS2B01G419300 chr5D 95.652 46 0 2 3768 3811 433513995 433514040 8.100000e-09 73.1
28 TraesCS2B01G419300 chr5D 93.182 44 2 1 5590 5632 214921959 214921916 4.870000e-06 63.9
29 TraesCS2B01G419300 chr3B 84.513 452 42 14 240 664 478174762 478175212 6.980000e-114 422.0
30 TraesCS2B01G419300 chr3B 96.653 239 8 0 1 239 111723209 111722971 1.180000e-106 398.0
31 TraesCS2B01G419300 chr3B 96.234 239 9 0 1 239 111710787 111710549 5.470000e-105 392.0
32 TraesCS2B01G419300 chr3B 93.750 96 3 3 2292 2384 10622598 10622503 2.190000e-29 141.0
33 TraesCS2B01G419300 chr3B 72.870 446 76 34 242 660 9929669 9930096 1.720000e-20 111.0
34 TraesCS2B01G419300 chr3B 93.220 59 4 0 5322 5380 28312981 28313039 2.890000e-13 87.9
35 TraesCS2B01G419300 chr3B 89.091 55 5 1 5322 5376 546184916 546184863 3.770000e-07 67.6
36 TraesCS2B01G419300 chr3B 84.848 66 7 2 5242 5305 150226464 150226528 4.870000e-06 63.9
37 TraesCS2B01G419300 chr3B 84.848 66 7 2 5242 5305 157720717 157720781 4.870000e-06 63.9
38 TraesCS2B01G419300 chr3B 86.667 60 5 2 5248 5305 174838535 174838477 4.870000e-06 63.9
39 TraesCS2B01G419300 chr3B 84.848 66 7 2 5242 5305 554825951 554826015 4.870000e-06 63.9
40 TraesCS2B01G419300 chr1B 85.230 413 34 11 240 626 18860681 18860270 3.270000e-107 399.0
41 TraesCS2B01G419300 chr1B 92.000 100 4 3 2292 2388 510799093 510799191 2.830000e-28 137.0
42 TraesCS2B01G419300 chr1B 88.372 86 9 1 5590 5674 39223355 39223270 1.030000e-17 102.0
43 TraesCS2B01G419300 chr1B 85.870 92 12 1 5585 5675 497472867 497472958 4.800000e-16 97.1
44 TraesCS2B01G419300 chrUn 95.816 239 10 0 1 239 393172033 393171795 2.550000e-103 387.0
45 TraesCS2B01G419300 chrUn 95.455 44 1 1 5590 5632 295723446 295723403 1.050000e-07 69.4
46 TraesCS2B01G419300 chrUn 95.455 44 1 1 5590 5632 295738870 295738827 1.050000e-07 69.4
47 TraesCS2B01G419300 chrUn 93.023 43 3 0 5590 5632 11035768 11035726 4.870000e-06 63.9
48 TraesCS2B01G419300 chrUn 90.698 43 4 0 5590 5632 11035646 11035688 2.270000e-04 58.4
49 TraesCS2B01G419300 chr5A 95.816 239 10 0 1 239 404337705 404337467 2.550000e-103 387.0
50 TraesCS2B01G419300 chr5A 95.816 239 10 0 1 239 404349892 404349654 2.550000e-103 387.0
51 TraesCS2B01G419300 chr5A 80.952 105 17 3 5583 5686 569803296 569803194 4.840000e-11 80.5
52 TraesCS2B01G419300 chr1A 95.816 239 10 0 1 239 218768154 218768392 2.550000e-103 387.0
53 TraesCS2B01G419300 chr1A 88.393 112 11 2 2274 2383 592316755 592316866 3.660000e-27 134.0
54 TraesCS2B01G419300 chr1A 83.951 81 12 1 5590 5669 48986155 48986235 6.260000e-10 76.8
55 TraesCS2B01G419300 chr1A 83.133 83 11 3 5593 5674 535761046 535760966 8.100000e-09 73.1
56 TraesCS2B01G419300 chr4A 93.385 257 15 2 1 257 681218531 681218785 4.260000e-101 379.0
57 TraesCS2B01G419300 chr4A 84.746 59 7 2 5322 5380 101942841 101942785 2.270000e-04 58.4
58 TraesCS2B01G419300 chr7D 90.659 182 13 4 483 661 72871065 72870885 7.540000e-59 239.0
59 TraesCS2B01G419300 chr7D 87.324 71 7 2 5322 5392 633249318 633249250 4.840000e-11 80.5
60 TraesCS2B01G419300 chr7D 78.102 137 20 7 533 660 608433622 608433757 1.740000e-10 78.7
61 TraesCS2B01G419300 chr7D 90.566 53 4 1 5593 5644 415434605 415434553 1.050000e-07 69.4
62 TraesCS2B01G419300 chr7D 93.617 47 2 1 5586 5632 543160642 543160687 1.050000e-07 69.4
63 TraesCS2B01G419300 chr6B 74.229 454 68 37 243 660 60866411 60865971 1.690000e-30 145.0
64 TraesCS2B01G419300 chr6B 91.176 102 7 2 2293 2393 76149749 76149849 2.830000e-28 137.0
65 TraesCS2B01G419300 chr6B 77.778 126 14 10 5191 5308 616864261 616864142 1.350000e-06 65.8
66 TraesCS2B01G419300 chr5B 93.000 100 3 4 2279 2376 140965917 140966014 6.080000e-30 143.0
67 TraesCS2B01G419300 chr5B 95.833 48 0 2 3768 3815 524361862 524361907 6.260000e-10 76.8
68 TraesCS2B01G419300 chr4D 93.617 94 4 2 2285 2377 18692709 18692617 7.870000e-29 139.0
69 TraesCS2B01G419300 chr4D 95.349 43 2 0 5590 5632 98448222 98448264 1.050000e-07 69.4
70 TraesCS2B01G419300 chr4D 97.297 37 1 0 5320 5356 470796334 470796370 4.870000e-06 63.9
71 TraesCS2B01G419300 chr1D 78.808 151 19 12 5167 5309 279521451 279521596 8.040000e-14 89.8
72 TraesCS2B01G419300 chr1D 97.619 42 1 0 3773 3814 261881544 261881585 8.100000e-09 73.1
73 TraesCS2B01G419300 chr1D 83.333 72 11 1 5604 5674 437299828 437299757 1.350000e-06 65.8
74 TraesCS2B01G419300 chr3D 96.154 52 1 1 5590 5640 515963400 515963349 3.740000e-12 84.2
75 TraesCS2B01G419300 chr3D 86.667 75 8 2 5589 5662 61319456 61319383 1.350000e-11 82.4
76 TraesCS2B01G419300 chr3D 82.955 88 13 2 5590 5675 556145791 556145704 1.740000e-10 78.7
77 TraesCS2B01G419300 chr3D 72.468 316 58 19 5153 5463 50884916 50884625 2.250000e-09 75.0
78 TraesCS2B01G419300 chr3D 97.619 42 1 0 5589 5630 560327851 560327810 8.100000e-09 73.1
79 TraesCS2B01G419300 chr3D 87.500 56 5 2 5577 5631 583015976 583015922 4.870000e-06 63.9
80 TraesCS2B01G419300 chr3D 100.000 30 0 0 5324 5353 173128920 173128949 8.150000e-04 56.5
81 TraesCS2B01G419300 chr3A 83.333 90 12 3 5592 5679 358268437 358268349 4.840000e-11 80.5
82 TraesCS2B01G419300 chr3A 90.566 53 4 1 5324 5376 617435179 617435230 1.050000e-07 69.4
83 TraesCS2B01G419300 chr3A 85.938 64 8 1 5322 5385 11763823 11763761 3.770000e-07 67.6
84 TraesCS2B01G419300 chr7A 84.416 77 11 1 5594 5669 731002410 731002334 2.250000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G419300 chr2B 600745537 600751361 5824 True 10757.000000 10757 100.000 1 5825 1 chr2B.!!$R1 5824
1 TraesCS2B01G419300 chr2A 654913059 654918089 5030 True 2300.666667 6348 89.023 687 5825 3 chr2A.!!$R2 5138
2 TraesCS2B01G419300 chr2D 511693602 511698832 5230 True 1479.000000 1956 89.947 687 5825 4 chr2D.!!$R3 5138

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
83 84 0.035630 ATGCAGAGTGCCTCTTGACC 60.036 55.0 2.32 0.00 44.23 4.02 F
740 741 0.036765 AACCCGTGAGCGCAGATAAA 60.037 50.0 11.47 0.00 36.67 1.40 F
998 1050 0.187361 CCCCACTTTTCCCTCCACAA 59.813 55.0 0.00 0.00 0.00 3.33 F
1466 1863 0.463654 TCGTGGCTGTATGGATTGGC 60.464 55.0 0.00 0.00 0.00 4.52 F
1559 1956 1.056700 AGAAGGTCACACTGCCACCT 61.057 55.0 0.00 0.00 42.72 4.00 F
3150 3571 0.040646 TCTTTACCAGCGGGAGAGGA 59.959 55.0 10.86 0.27 38.05 3.71 F
4601 5054 0.095935 CATGTTTCTTCGCGCAGGAG 59.904 55.0 8.75 4.54 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2077 2494 0.034863 GGGAAATTGACAGGGCCGTA 60.035 55.000 0.00 0.0 0.00 4.02 R
2396 2813 0.319555 GCACGTAGCAAGTGTGAGGA 60.320 55.000 5.30 0.0 44.79 3.71 R
2659 3076 1.201429 AGGCAGTACCCTCCAACAGG 61.201 60.000 0.00 0.0 43.01 4.00 R
3081 3502 2.416566 CGGAACAGGACTGTCATCTGAG 60.417 54.545 17.34 0.0 44.13 3.35 R
3534 3955 2.094182 ACTCCACATGTACTAGTTGCCG 60.094 50.000 0.00 0.0 0.00 5.69 R
4604 5057 0.035152 TCCTCATGTGCGCAAATCCT 60.035 50.000 14.00 0.0 0.00 3.24 R
5711 6263 0.101219 CACCGAGCGATCAGTCATCA 59.899 55.000 0.00 0.0 0.00 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.865477 CTGGTAACGCCCCACATAA 57.135 52.632 0.00 0.00 42.51 1.90
19 20 2.116827 CTGGTAACGCCCCACATAAA 57.883 50.000 0.00 0.00 42.51 1.40
20 21 2.014128 CTGGTAACGCCCCACATAAAG 58.986 52.381 0.00 0.00 42.51 1.85
21 22 1.351683 TGGTAACGCCCCACATAAAGT 59.648 47.619 0.00 0.00 42.51 2.66
22 23 2.876485 TGGTAACGCCCCACATAAAGTG 60.876 50.000 0.00 0.00 44.56 3.16
57 58 9.780186 ATTATAAAGTCTACTTGATTACAGGCC 57.220 33.333 0.00 0.00 36.12 5.19
58 59 3.802948 AGTCTACTTGATTACAGGCCG 57.197 47.619 0.00 0.00 0.00 6.13
59 60 3.097614 AGTCTACTTGATTACAGGCCGT 58.902 45.455 0.00 0.49 0.00 5.68
60 61 3.514309 AGTCTACTTGATTACAGGCCGTT 59.486 43.478 5.57 0.00 0.00 4.44
61 62 3.617263 GTCTACTTGATTACAGGCCGTTG 59.383 47.826 5.57 0.00 0.00 4.10
62 63 1.165270 ACTTGATTACAGGCCGTTGC 58.835 50.000 5.57 0.00 0.00 4.17
63 64 1.164411 CTTGATTACAGGCCGTTGCA 58.836 50.000 5.57 0.00 40.13 4.08
64 65 1.539388 CTTGATTACAGGCCGTTGCAA 59.461 47.619 0.00 0.00 40.13 4.08
65 66 1.832883 TGATTACAGGCCGTTGCAAT 58.167 45.000 0.59 0.00 40.13 3.56
66 67 1.472082 TGATTACAGGCCGTTGCAATG 59.528 47.619 11.90 11.90 40.13 2.82
67 68 0.173255 ATTACAGGCCGTTGCAATGC 59.827 50.000 13.42 13.60 40.13 3.56
68 69 1.175347 TTACAGGCCGTTGCAATGCA 61.175 50.000 20.96 2.72 40.13 3.96
69 70 1.585267 TACAGGCCGTTGCAATGCAG 61.585 55.000 20.96 15.88 40.61 4.41
70 71 2.282391 AGGCCGTTGCAATGCAGA 60.282 55.556 20.96 0.00 40.61 4.26
71 72 2.180017 GGCCGTTGCAATGCAGAG 59.820 61.111 20.96 6.53 40.61 3.35
72 73 2.629656 GGCCGTTGCAATGCAGAGT 61.630 57.895 20.96 0.00 40.61 3.24
73 74 1.443194 GCCGTTGCAATGCAGAGTG 60.443 57.895 13.42 0.00 40.61 3.51
74 75 1.443194 CCGTTGCAATGCAGAGTGC 60.443 57.895 13.42 11.75 43.64 4.40
75 76 1.443194 CGTTGCAATGCAGAGTGCC 60.443 57.895 8.31 2.76 44.23 5.01
76 77 1.859427 CGTTGCAATGCAGAGTGCCT 61.859 55.000 8.31 0.00 44.23 4.75
77 78 0.109412 GTTGCAATGCAGAGTGCCTC 60.109 55.000 8.31 6.50 44.23 4.70
78 79 0.251033 TTGCAATGCAGAGTGCCTCT 60.251 50.000 8.31 0.00 44.23 3.69
79 80 0.251033 TGCAATGCAGAGTGCCTCTT 60.251 50.000 2.72 0.00 44.23 2.85
80 81 0.170561 GCAATGCAGAGTGCCTCTTG 59.829 55.000 0.00 0.00 44.23 3.02
81 82 1.817357 CAATGCAGAGTGCCTCTTGA 58.183 50.000 2.32 0.00 44.23 3.02
82 83 1.467734 CAATGCAGAGTGCCTCTTGAC 59.532 52.381 2.32 0.00 44.23 3.18
83 84 0.035630 ATGCAGAGTGCCTCTTGACC 60.036 55.000 2.32 0.00 44.23 4.02
84 85 1.123861 TGCAGAGTGCCTCTTGACCT 61.124 55.000 2.32 0.00 44.23 3.85
85 86 0.390998 GCAGAGTGCCTCTTGACCTC 60.391 60.000 2.32 0.00 38.99 3.85
86 87 0.248843 CAGAGTGCCTCTTGACCTCC 59.751 60.000 2.32 0.00 38.99 4.30
87 88 0.116143 AGAGTGCCTCTTGACCTCCT 59.884 55.000 0.00 0.00 37.60 3.69
88 89 0.248843 GAGTGCCTCTTGACCTCCTG 59.751 60.000 0.00 0.00 0.00 3.86
89 90 0.178921 AGTGCCTCTTGACCTCCTGA 60.179 55.000 0.00 0.00 0.00 3.86
90 91 0.908198 GTGCCTCTTGACCTCCTGAT 59.092 55.000 0.00 0.00 0.00 2.90
91 92 0.907486 TGCCTCTTGACCTCCTGATG 59.093 55.000 0.00 0.00 0.00 3.07
92 93 0.179936 GCCTCTTGACCTCCTGATGG 59.820 60.000 0.00 0.00 0.00 3.51
93 94 1.577736 CCTCTTGACCTCCTGATGGT 58.422 55.000 0.00 0.00 41.07 3.55
98 99 2.889200 GACCTCCTGATGGTCGAGT 58.111 57.895 0.00 0.00 43.55 4.18
99 100 0.457851 GACCTCCTGATGGTCGAGTG 59.542 60.000 0.00 0.00 43.55 3.51
100 101 0.039764 ACCTCCTGATGGTCGAGTGA 59.960 55.000 0.00 0.00 31.03 3.41
101 102 0.743688 CCTCCTGATGGTCGAGTGAG 59.256 60.000 0.00 0.00 34.23 3.51
102 103 1.468985 CTCCTGATGGTCGAGTGAGT 58.531 55.000 0.00 0.00 34.23 3.41
103 104 1.403679 CTCCTGATGGTCGAGTGAGTC 59.596 57.143 0.00 0.00 34.23 3.36
104 105 1.004862 TCCTGATGGTCGAGTGAGTCT 59.995 52.381 0.00 0.00 34.23 3.24
105 106 1.821753 CCTGATGGTCGAGTGAGTCTT 59.178 52.381 0.00 0.00 0.00 3.01
106 107 2.159310 CCTGATGGTCGAGTGAGTCTTC 60.159 54.545 0.00 0.00 0.00 2.87
107 108 1.468914 TGATGGTCGAGTGAGTCTTCG 59.531 52.381 10.22 10.22 0.00 3.79
108 109 1.469308 GATGGTCGAGTGAGTCTTCGT 59.531 52.381 14.37 0.00 0.00 3.85
109 110 0.591659 TGGTCGAGTGAGTCTTCGTG 59.408 55.000 14.37 0.00 0.00 4.35
110 111 0.109689 GGTCGAGTGAGTCTTCGTGG 60.110 60.000 14.37 0.00 0.00 4.94
111 112 0.592148 GTCGAGTGAGTCTTCGTGGT 59.408 55.000 14.37 0.00 0.00 4.16
112 113 0.873054 TCGAGTGAGTCTTCGTGGTC 59.127 55.000 14.37 0.00 0.00 4.02
113 114 0.452950 CGAGTGAGTCTTCGTGGTCG 60.453 60.000 8.78 0.00 38.55 4.79
114 115 0.873054 GAGTGAGTCTTCGTGGTCGA 59.127 55.000 0.00 0.00 44.66 4.20
115 116 0.875728 AGTGAGTCTTCGTGGTCGAG 59.124 55.000 0.00 0.00 46.81 4.04
116 117 0.592148 GTGAGTCTTCGTGGTCGAGT 59.408 55.000 0.00 0.00 46.81 4.18
117 118 0.873054 TGAGTCTTCGTGGTCGAGTC 59.127 55.000 0.00 0.00 46.81 3.36
118 119 0.168568 GAGTCTTCGTGGTCGAGTCC 59.831 60.000 0.00 0.00 46.81 3.85
119 120 0.250814 AGTCTTCGTGGTCGAGTCCT 60.251 55.000 0.00 0.00 46.81 3.85
120 121 0.597072 GTCTTCGTGGTCGAGTCCTT 59.403 55.000 0.00 0.00 46.81 3.36
121 122 0.879765 TCTTCGTGGTCGAGTCCTTC 59.120 55.000 0.00 0.00 46.81 3.46
122 123 0.596577 CTTCGTGGTCGAGTCCTTCA 59.403 55.000 0.00 0.00 46.81 3.02
123 124 1.000607 CTTCGTGGTCGAGTCCTTCAA 60.001 52.381 0.00 0.00 46.81 2.69
124 125 0.596577 TCGTGGTCGAGTCCTTCAAG 59.403 55.000 0.00 0.00 41.35 3.02
125 126 0.314302 CGTGGTCGAGTCCTTCAAGT 59.686 55.000 0.00 0.00 39.71 3.16
126 127 1.666311 CGTGGTCGAGTCCTTCAAGTC 60.666 57.143 0.00 0.00 39.71 3.01
127 128 1.340248 GTGGTCGAGTCCTTCAAGTCA 59.660 52.381 0.00 0.00 0.00 3.41
128 129 1.613925 TGGTCGAGTCCTTCAAGTCAG 59.386 52.381 0.00 0.00 0.00 3.51
129 130 1.614413 GGTCGAGTCCTTCAAGTCAGT 59.386 52.381 0.00 0.00 0.00 3.41
130 131 2.351932 GGTCGAGTCCTTCAAGTCAGTC 60.352 54.545 0.00 0.00 0.00 3.51
131 132 1.535896 TCGAGTCCTTCAAGTCAGTCG 59.464 52.381 4.97 4.97 33.79 4.18
132 133 1.535896 CGAGTCCTTCAAGTCAGTCGA 59.464 52.381 5.29 0.00 34.28 4.20
133 134 2.413502 CGAGTCCTTCAAGTCAGTCGAG 60.414 54.545 5.29 0.00 34.28 4.04
134 135 2.554893 GAGTCCTTCAAGTCAGTCGAGT 59.445 50.000 0.00 0.00 0.00 4.18
135 136 2.294791 AGTCCTTCAAGTCAGTCGAGTG 59.705 50.000 14.33 14.33 0.00 3.51
136 137 2.034812 GTCCTTCAAGTCAGTCGAGTGT 59.965 50.000 19.41 0.00 0.00 3.55
137 138 2.034685 TCCTTCAAGTCAGTCGAGTGTG 59.965 50.000 19.41 11.05 0.00 3.82
138 139 2.223829 CCTTCAAGTCAGTCGAGTGTGT 60.224 50.000 19.41 5.78 0.00 3.72
139 140 2.776312 TCAAGTCAGTCGAGTGTGTC 57.224 50.000 19.41 11.32 0.00 3.67
140 141 1.337071 TCAAGTCAGTCGAGTGTGTCC 59.663 52.381 19.41 6.94 0.00 4.02
141 142 0.674534 AAGTCAGTCGAGTGTGTCCC 59.325 55.000 19.41 4.71 0.00 4.46
142 143 0.178987 AGTCAGTCGAGTGTGTCCCT 60.179 55.000 19.41 6.71 0.00 4.20
143 144 0.241481 GTCAGTCGAGTGTGTCCCTC 59.759 60.000 19.41 0.77 0.00 4.30
147 148 4.245054 CGAGTGTGTCCCTCGTTG 57.755 61.111 1.87 0.00 45.09 4.10
148 149 1.372997 CGAGTGTGTCCCTCGTTGG 60.373 63.158 1.87 0.00 45.09 3.77
149 150 1.746517 GAGTGTGTCCCTCGTTGGT 59.253 57.895 0.00 0.00 0.00 3.67
150 151 0.319641 GAGTGTGTCCCTCGTTGGTC 60.320 60.000 0.00 0.00 0.00 4.02
151 152 1.663702 GTGTGTCCCTCGTTGGTCG 60.664 63.158 0.00 0.00 41.41 4.79
152 153 1.829096 TGTGTCCCTCGTTGGTCGA 60.829 57.895 0.00 0.00 46.83 4.20
153 154 1.372623 GTGTCCCTCGTTGGTCGAC 60.373 63.158 7.13 7.13 44.01 4.20
154 155 1.529948 TGTCCCTCGTTGGTCGACT 60.530 57.895 16.46 0.00 44.01 4.18
155 156 1.080705 GTCCCTCGTTGGTCGACTG 60.081 63.158 16.46 3.50 44.01 3.51
156 157 2.261671 CCCTCGTTGGTCGACTGG 59.738 66.667 16.46 8.13 44.01 4.00
157 158 2.273179 CCCTCGTTGGTCGACTGGA 61.273 63.158 16.46 6.84 44.01 3.86
158 159 1.663739 CCTCGTTGGTCGACTGGAA 59.336 57.895 16.46 3.35 44.01 3.53
159 160 0.388649 CCTCGTTGGTCGACTGGAAG 60.389 60.000 16.46 6.98 44.01 3.46
160 161 0.388649 CTCGTTGGTCGACTGGAAGG 60.389 60.000 16.46 11.28 44.01 3.46
161 162 2.027625 CGTTGGTCGACTGGAAGGC 61.028 63.158 16.46 0.00 42.86 4.35
168 169 3.701454 GACTGGAAGGCGACCTCT 58.299 61.111 0.00 0.00 39.30 3.69
169 170 1.976112 GACTGGAAGGCGACCTCTT 59.024 57.895 0.00 0.00 39.30 2.85
170 171 0.108567 GACTGGAAGGCGACCTCTTC 60.109 60.000 0.00 0.00 39.30 2.87
171 172 0.543174 ACTGGAAGGCGACCTCTTCT 60.543 55.000 0.00 0.00 40.17 2.85
172 173 1.272536 ACTGGAAGGCGACCTCTTCTA 60.273 52.381 0.00 0.00 40.17 2.10
173 174 1.825474 CTGGAAGGCGACCTCTTCTAA 59.175 52.381 0.00 0.00 40.17 2.10
174 175 1.825474 TGGAAGGCGACCTCTTCTAAG 59.175 52.381 0.00 0.00 40.17 2.18
175 176 1.137282 GGAAGGCGACCTCTTCTAAGG 59.863 57.143 0.00 0.00 40.17 2.69
176 177 2.100989 GAAGGCGACCTCTTCTAAGGA 58.899 52.381 0.00 0.00 38.87 3.36
177 178 2.463047 AGGCGACCTCTTCTAAGGAT 57.537 50.000 0.00 0.00 38.87 3.24
178 179 2.035632 AGGCGACCTCTTCTAAGGATG 58.964 52.381 0.00 0.00 38.87 3.51
179 180 1.757699 GGCGACCTCTTCTAAGGATGT 59.242 52.381 0.00 0.00 38.87 3.06
180 181 2.223852 GGCGACCTCTTCTAAGGATGTC 60.224 54.545 0.00 0.00 38.87 3.06
181 182 2.223852 GCGACCTCTTCTAAGGATGTCC 60.224 54.545 0.00 0.00 38.87 4.02
195 196 5.484734 AGGATGTCCTAGGGTAAGTTACT 57.515 43.478 9.46 0.00 46.48 2.24
196 197 5.851418 AGGATGTCCTAGGGTAAGTTACTT 58.149 41.667 9.46 2.32 46.48 2.24
197 198 5.661759 AGGATGTCCTAGGGTAAGTTACTTG 59.338 44.000 9.46 1.66 46.48 3.16
198 199 5.659971 GGATGTCCTAGGGTAAGTTACTTGA 59.340 44.000 9.46 0.00 0.00 3.02
199 200 6.155737 GGATGTCCTAGGGTAAGTTACTTGAA 59.844 42.308 9.46 0.00 0.00 2.69
200 201 7.147532 GGATGTCCTAGGGTAAGTTACTTGAAT 60.148 40.741 9.46 0.00 0.00 2.57
201 202 7.563724 TGTCCTAGGGTAAGTTACTTGAATT 57.436 36.000 9.46 0.00 0.00 2.17
202 203 8.669055 TGTCCTAGGGTAAGTTACTTGAATTA 57.331 34.615 9.46 0.00 0.00 1.40
203 204 8.755977 TGTCCTAGGGTAAGTTACTTGAATTAG 58.244 37.037 9.46 5.06 0.00 1.73
204 205 8.202811 GTCCTAGGGTAAGTTACTTGAATTAGG 58.797 40.741 9.46 12.70 0.00 2.69
205 206 7.902941 TCCTAGGGTAAGTTACTTGAATTAGGT 59.097 37.037 9.46 0.00 0.00 3.08
206 207 8.202811 CCTAGGGTAAGTTACTTGAATTAGGTC 58.797 40.741 12.65 0.00 0.00 3.85
207 208 6.955364 AGGGTAAGTTACTTGAATTAGGTCC 58.045 40.000 12.65 1.43 0.00 4.46
208 209 6.502863 AGGGTAAGTTACTTGAATTAGGTCCA 59.497 38.462 12.65 0.00 0.00 4.02
209 210 7.184022 AGGGTAAGTTACTTGAATTAGGTCCAT 59.816 37.037 12.65 0.00 0.00 3.41
210 211 7.282450 GGGTAAGTTACTTGAATTAGGTCCATG 59.718 40.741 12.65 0.00 0.00 3.66
211 212 8.044908 GGTAAGTTACTTGAATTAGGTCCATGA 58.955 37.037 12.65 0.00 0.00 3.07
212 213 7.923414 AAGTTACTTGAATTAGGTCCATGAC 57.077 36.000 0.00 0.00 0.00 3.06
223 224 2.541466 GGTCCATGACCCTATCCTAGG 58.459 57.143 0.82 0.82 46.19 3.02
224 225 2.158143 GGTCCATGACCCTATCCTAGGT 60.158 54.545 9.08 0.00 46.19 3.08
225 226 3.077088 GGTCCATGACCCTATCCTAGGTA 59.923 52.174 9.08 0.00 46.19 3.08
226 227 4.087907 GTCCATGACCCTATCCTAGGTAC 58.912 52.174 9.08 0.00 44.73 3.34
227 228 3.730594 TCCATGACCCTATCCTAGGTACA 59.269 47.826 9.08 0.81 44.73 2.90
228 229 4.360140 TCCATGACCCTATCCTAGGTACAT 59.640 45.833 9.08 0.00 44.73 2.29
229 230 5.558339 TCCATGACCCTATCCTAGGTACATA 59.442 44.000 9.08 0.00 44.73 2.29
230 231 6.047479 TCCATGACCCTATCCTAGGTACATAA 59.953 42.308 9.08 0.00 44.73 1.90
231 232 6.154706 CCATGACCCTATCCTAGGTACATAAC 59.845 46.154 9.08 0.00 44.73 1.89
243 244 2.356695 GGTACATAACCCCATCAAACGC 59.643 50.000 0.00 0.00 43.16 4.84
244 245 1.470051 ACATAACCCCATCAAACGCC 58.530 50.000 0.00 0.00 0.00 5.68
245 246 0.380378 CATAACCCCATCAAACGCCG 59.620 55.000 0.00 0.00 0.00 6.46
246 247 1.381165 ATAACCCCATCAAACGCCGC 61.381 55.000 0.00 0.00 0.00 6.53
247 248 2.472414 TAACCCCATCAAACGCCGCT 62.472 55.000 0.00 0.00 0.00 5.52
248 249 3.508840 CCCCATCAAACGCCGCTC 61.509 66.667 0.00 0.00 0.00 5.03
249 250 3.864686 CCCATCAAACGCCGCTCG 61.865 66.667 0.00 0.00 45.38 5.03
250 251 4.520846 CCATCAAACGCCGCTCGC 62.521 66.667 0.00 0.00 43.23 5.03
251 252 4.520846 CATCAAACGCCGCTCGCC 62.521 66.667 0.00 0.00 43.23 5.54
254 255 2.916502 ATCAAACGCCGCTCGCCATA 62.917 55.000 0.00 0.00 43.23 2.74
255 256 3.192922 AAACGCCGCTCGCCATAC 61.193 61.111 0.00 0.00 43.23 2.39
262 263 4.626081 GCTCGCCATACCGCCCAT 62.626 66.667 0.00 0.00 0.00 4.00
263 264 2.357517 CTCGCCATACCGCCCATC 60.358 66.667 0.00 0.00 0.00 3.51
264 265 4.293648 TCGCCATACCGCCCATCG 62.294 66.667 0.00 0.00 38.08 3.84
265 266 4.293648 CGCCATACCGCCCATCGA 62.294 66.667 0.00 0.00 41.67 3.59
266 267 2.347490 GCCATACCGCCCATCGAT 59.653 61.111 0.00 0.00 41.67 3.59
267 268 2.034879 GCCATACCGCCCATCGATG 61.035 63.158 18.76 18.76 41.67 3.84
269 270 2.034879 CATACCGCCCATCGATGGC 61.035 63.158 34.77 27.49 46.70 4.40
270 271 3.254024 ATACCGCCCATCGATGGCC 62.254 63.158 34.77 25.76 46.48 5.36
297 298 4.154347 CTGCTCGCCAGGGACCTC 62.154 72.222 0.00 0.00 37.93 3.85
306 307 4.787280 AGGGACCTCCTGGGCGAG 62.787 72.222 0.00 0.00 46.07 5.03
312 313 4.154347 CTCCTGGGCGAGCCTCAC 62.154 72.222 14.33 0.00 36.10 3.51
313 314 4.704103 TCCTGGGCGAGCCTCACT 62.704 66.667 14.33 0.00 36.10 3.41
314 315 4.463879 CCTGGGCGAGCCTCACTG 62.464 72.222 14.33 1.86 36.10 3.66
334 335 3.402681 CCGCCATGGACCTGGTCT 61.403 66.667 25.01 4.73 42.00 3.85
335 336 2.124983 CGCCATGGACCTGGTCTG 60.125 66.667 25.01 16.45 38.63 3.51
336 337 2.659063 CGCCATGGACCTGGTCTGA 61.659 63.158 25.01 13.30 38.63 3.27
337 338 1.222936 GCCATGGACCTGGTCTGAG 59.777 63.158 25.01 14.57 38.63 3.35
338 339 1.222936 CCATGGACCTGGTCTGAGC 59.777 63.158 25.01 10.02 32.47 4.26
339 340 1.270414 CCATGGACCTGGTCTGAGCT 61.270 60.000 25.01 4.38 32.47 4.09
340 341 0.177604 CATGGACCTGGTCTGAGCTC 59.822 60.000 25.01 6.82 32.47 4.09
341 342 1.326213 ATGGACCTGGTCTGAGCTCG 61.326 60.000 25.01 4.19 32.47 5.03
342 343 2.183046 GACCTGGTCTGAGCTCGC 59.817 66.667 19.53 1.60 0.00 5.03
343 344 3.691744 GACCTGGTCTGAGCTCGCG 62.692 68.421 19.53 0.00 0.00 5.87
360 361 3.936203 GCCACCACCTCGTGACCA 61.936 66.667 0.00 0.00 35.23 4.02
361 362 2.030562 CCACCACCTCGTGACCAC 59.969 66.667 0.00 0.00 35.23 4.16
362 363 2.802724 CCACCACCTCGTGACCACA 61.803 63.158 0.85 0.00 35.23 4.17
363 364 1.594293 CACCACCTCGTGACCACAC 60.594 63.158 0.85 0.00 42.88 3.82
364 365 2.030562 CCACCTCGTGACCACACC 59.969 66.667 0.85 0.00 43.34 4.16
365 366 2.355837 CACCTCGTGACCACACCG 60.356 66.667 0.85 0.00 43.34 4.94
366 367 4.295119 ACCTCGTGACCACACCGC 62.295 66.667 0.85 0.00 43.34 5.68
387 388 3.948719 GCCCGTCCTCCACCAACA 61.949 66.667 0.00 0.00 0.00 3.33
388 389 2.032071 CCCGTCCTCCACCAACAC 59.968 66.667 0.00 0.00 0.00 3.32
389 390 2.813726 CCCGTCCTCCACCAACACA 61.814 63.158 0.00 0.00 0.00 3.72
390 391 1.597027 CCGTCCTCCACCAACACAC 60.597 63.158 0.00 0.00 0.00 3.82
391 392 1.597027 CGTCCTCCACCAACACACC 60.597 63.158 0.00 0.00 0.00 4.16
392 393 1.597027 GTCCTCCACCAACACACCG 60.597 63.158 0.00 0.00 0.00 4.94
393 394 2.978010 CCTCCACCAACACACCGC 60.978 66.667 0.00 0.00 0.00 5.68
394 395 2.111043 CTCCACCAACACACCGCT 59.889 61.111 0.00 0.00 0.00 5.52
395 396 2.203139 TCCACCAACACACCGCTG 60.203 61.111 0.00 0.00 0.00 5.18
396 397 3.964875 CCACCAACACACCGCTGC 61.965 66.667 0.00 0.00 0.00 5.25
397 398 3.964875 CACCAACACACCGCTGCC 61.965 66.667 0.00 0.00 0.00 4.85
400 401 3.964875 CAACACACCGCTGCCCAC 61.965 66.667 0.00 0.00 0.00 4.61
428 429 3.941188 CACCACCACACCGCTCCT 61.941 66.667 0.00 0.00 0.00 3.69
429 430 3.626924 ACCACCACACCGCTCCTC 61.627 66.667 0.00 0.00 0.00 3.71
430 431 4.394712 CCACCACACCGCTCCTCC 62.395 72.222 0.00 0.00 0.00 4.30
431 432 3.625897 CACCACACCGCTCCTCCA 61.626 66.667 0.00 0.00 0.00 3.86
432 433 3.626924 ACCACACCGCTCCTCCAC 61.627 66.667 0.00 0.00 0.00 4.02
433 434 4.742201 CCACACCGCTCCTCCACG 62.742 72.222 0.00 0.00 0.00 4.94
434 435 3.991051 CACACCGCTCCTCCACGT 61.991 66.667 0.00 0.00 0.00 4.49
435 436 3.681835 ACACCGCTCCTCCACGTC 61.682 66.667 0.00 0.00 0.00 4.34
436 437 4.436998 CACCGCTCCTCCACGTCC 62.437 72.222 0.00 0.00 0.00 4.79
492 493 4.729918 CCCTGCAGACAGCCCACC 62.730 72.222 17.39 0.00 43.02 4.61
493 494 3.644606 CCTGCAGACAGCCCACCT 61.645 66.667 17.39 0.00 43.02 4.00
494 495 2.046507 CTGCAGACAGCCCACCTC 60.047 66.667 8.42 0.00 44.83 3.85
495 496 2.527624 TGCAGACAGCCCACCTCT 60.528 61.111 0.00 0.00 44.83 3.69
496 497 2.046507 GCAGACAGCCCACCTCTG 60.047 66.667 0.00 0.00 37.23 3.35
497 498 2.046507 CAGACAGCCCACCTCTGC 60.047 66.667 0.00 0.00 35.04 4.26
498 499 3.699894 AGACAGCCCACCTCTGCG 61.700 66.667 0.00 0.00 35.04 5.18
505 506 4.069232 CCACCTCTGCGCGAAGGA 62.069 66.667 28.65 12.28 0.00 3.36
506 507 2.507992 CACCTCTGCGCGAAGGAG 60.508 66.667 28.65 19.58 39.94 3.69
507 508 4.443266 ACCTCTGCGCGAAGGAGC 62.443 66.667 28.65 0.97 38.29 4.70
514 515 3.267860 CGCGAAGGAGCAGCCATC 61.268 66.667 0.00 0.00 40.02 3.51
515 516 2.899339 GCGAAGGAGCAGCCATCC 60.899 66.667 0.00 0.00 40.02 3.51
516 517 2.586245 CGAAGGAGCAGCCATCCA 59.414 61.111 3.60 0.00 39.47 3.41
517 518 1.523258 CGAAGGAGCAGCCATCCAG 60.523 63.158 3.60 0.00 39.47 3.86
518 519 1.153005 GAAGGAGCAGCCATCCAGG 60.153 63.158 3.60 0.00 39.47 4.45
519 520 1.617536 AAGGAGCAGCCATCCAGGA 60.618 57.895 3.60 0.00 41.22 3.86
520 521 1.919600 AAGGAGCAGCCATCCAGGAC 61.920 60.000 3.60 0.00 41.22 3.85
521 522 2.202987 GAGCAGCCATCCAGGACG 60.203 66.667 0.00 0.00 41.22 4.79
522 523 4.479993 AGCAGCCATCCAGGACGC 62.480 66.667 0.00 0.00 41.22 5.19
544 545 3.737172 CCTCGCCCGCCACTTTTG 61.737 66.667 0.00 0.00 0.00 2.44
545 546 2.668212 CTCGCCCGCCACTTTTGA 60.668 61.111 0.00 0.00 0.00 2.69
546 547 2.966309 CTCGCCCGCCACTTTTGAC 61.966 63.158 0.00 0.00 0.00 3.18
547 548 4.383602 CGCCCGCCACTTTTGACG 62.384 66.667 0.00 0.00 0.00 4.35
548 549 4.038080 GCCCGCCACTTTTGACGG 62.038 66.667 0.00 0.00 45.21 4.79
549 550 4.038080 CCCGCCACTTTTGACGGC 62.038 66.667 0.00 0.00 44.29 5.68
550 551 4.038080 CCGCCACTTTTGACGGCC 62.038 66.667 0.00 0.00 43.17 6.13
551 552 4.383602 CGCCACTTTTGACGGCCG 62.384 66.667 26.86 26.86 43.17 6.13
552 553 4.038080 GCCACTTTTGACGGCCGG 62.038 66.667 31.76 13.10 40.07 6.13
553 554 3.361977 CCACTTTTGACGGCCGGG 61.362 66.667 31.76 14.60 0.00 5.73
554 555 4.038080 CACTTTTGACGGCCGGGC 62.038 66.667 31.76 20.04 0.00 6.13
598 599 3.237741 CCGAGGAGGGGGCAGATC 61.238 72.222 0.00 0.00 35.97 2.75
599 600 2.123077 CGAGGAGGGGGCAGATCT 60.123 66.667 0.00 0.00 0.00 2.75
600 601 2.506061 CGAGGAGGGGGCAGATCTG 61.506 68.421 18.84 18.84 0.00 2.90
601 602 2.040043 AGGAGGGGGCAGATCTGG 60.040 66.667 23.89 6.34 0.00 3.86
608 609 3.859414 GGCAGATCTGGCGCCTCT 61.859 66.667 30.74 19.70 46.08 3.69
609 610 2.588314 GCAGATCTGGCGCCTCTG 60.588 66.667 30.19 30.19 39.50 3.35
610 611 2.588314 CAGATCTGGCGCCTCTGC 60.588 66.667 29.70 14.64 30.91 4.26
620 621 2.512515 GCCTCTGCGCTAGGGTTG 60.513 66.667 24.69 5.40 34.46 3.77
621 622 2.187946 CCTCTGCGCTAGGGTTGG 59.812 66.667 18.43 4.11 0.00 3.77
622 623 2.187946 CTCTGCGCTAGGGTTGGG 59.812 66.667 9.73 0.00 0.00 4.12
623 624 3.391665 CTCTGCGCTAGGGTTGGGG 62.392 68.421 9.73 0.00 0.00 4.96
624 625 4.489771 CTGCGCTAGGGTTGGGGG 62.490 72.222 9.73 0.00 0.00 5.40
626 627 4.484872 GCGCTAGGGTTGGGGGTC 62.485 72.222 8.77 0.00 0.00 4.46
627 628 3.793888 CGCTAGGGTTGGGGGTCC 61.794 72.222 0.00 0.00 0.00 4.46
628 629 2.286197 GCTAGGGTTGGGGGTCCT 60.286 66.667 0.00 0.00 34.85 3.85
629 630 1.929088 GCTAGGGTTGGGGGTCCTT 60.929 63.158 0.00 0.00 32.46 3.36
630 631 1.923006 GCTAGGGTTGGGGGTCCTTC 61.923 65.000 0.00 0.00 32.46 3.46
631 632 0.549169 CTAGGGTTGGGGGTCCTTCA 60.549 60.000 0.00 0.00 32.46 3.02
632 633 0.549169 TAGGGTTGGGGGTCCTTCAG 60.549 60.000 0.00 0.00 32.46 3.02
633 634 1.850755 GGGTTGGGGGTCCTTCAGA 60.851 63.158 0.00 0.00 0.00 3.27
634 635 1.685820 GGTTGGGGGTCCTTCAGAG 59.314 63.158 0.00 0.00 0.00 3.35
635 636 1.134438 GGTTGGGGGTCCTTCAGAGT 61.134 60.000 0.00 0.00 0.00 3.24
636 637 0.325272 GTTGGGGGTCCTTCAGAGTC 59.675 60.000 0.00 0.00 0.00 3.36
637 638 1.192146 TTGGGGGTCCTTCAGAGTCG 61.192 60.000 0.00 0.00 0.00 4.18
638 639 2.579738 GGGGTCCTTCAGAGTCGC 59.420 66.667 0.00 0.00 0.00 5.19
639 640 1.985116 GGGGTCCTTCAGAGTCGCT 60.985 63.158 0.00 0.00 0.00 4.93
640 641 1.513622 GGGTCCTTCAGAGTCGCTC 59.486 63.158 0.00 0.00 0.00 5.03
641 642 1.137825 GGTCCTTCAGAGTCGCTCG 59.862 63.158 1.98 0.00 35.36 5.03
642 643 1.515304 GTCCTTCAGAGTCGCTCGC 60.515 63.158 1.98 0.00 35.36 5.03
643 644 2.578178 CCTTCAGAGTCGCTCGCG 60.578 66.667 0.00 0.00 41.35 5.87
644 645 3.243892 CTTCAGAGTCGCTCGCGC 61.244 66.667 0.00 0.00 39.59 6.86
670 671 3.441290 CGGGAGGAGCGAGTCGTT 61.441 66.667 15.08 8.27 0.00 3.85
671 672 2.971452 GGGAGGAGCGAGTCGTTT 59.029 61.111 15.08 2.65 0.00 3.60
672 673 1.292541 GGGAGGAGCGAGTCGTTTT 59.707 57.895 15.08 0.50 0.00 2.43
673 674 0.736672 GGGAGGAGCGAGTCGTTTTC 60.737 60.000 15.08 9.92 0.00 2.29
674 675 0.736672 GGAGGAGCGAGTCGTTTTCC 60.737 60.000 15.08 17.45 0.00 3.13
675 676 1.071567 GAGGAGCGAGTCGTTTTCCG 61.072 60.000 15.08 0.00 32.52 4.30
676 677 1.080974 GGAGCGAGTCGTTTTCCGA 60.081 57.895 15.08 0.00 45.00 4.55
686 687 2.750948 TCGTTTTCCGAGGAAGTTCTG 58.249 47.619 4.63 0.00 41.60 3.02
687 688 2.101917 TCGTTTTCCGAGGAAGTTCTGT 59.898 45.455 4.63 0.00 41.60 3.41
688 689 2.870411 CGTTTTCCGAGGAAGTTCTGTT 59.130 45.455 4.63 0.00 39.56 3.16
689 690 3.303132 CGTTTTCCGAGGAAGTTCTGTTG 60.303 47.826 4.63 0.00 39.56 3.33
690 691 1.878953 TTCCGAGGAAGTTCTGTTGC 58.121 50.000 2.25 0.00 0.00 4.17
697 698 2.171448 AGGAAGTTCTGTTGCTGACACT 59.829 45.455 2.25 0.00 33.82 3.55
706 707 6.286240 TCTGTTGCTGACACTATCATTAGT 57.714 37.500 0.00 0.00 39.30 2.24
708 709 7.836842 TCTGTTGCTGACACTATCATTAGTAA 58.163 34.615 0.00 0.00 36.50 2.24
710 711 8.648557 TGTTGCTGACACTATCATTAGTAATC 57.351 34.615 0.00 0.00 36.50 1.75
738 739 1.037493 ATAACCCGTGAGCGCAGATA 58.963 50.000 11.47 0.00 36.67 1.98
740 741 0.036765 AACCCGTGAGCGCAGATAAA 60.037 50.000 11.47 0.00 36.67 1.40
750 751 6.972901 CGTGAGCGCAGATAAATATCCTTATA 59.027 38.462 11.47 0.00 33.17 0.98
798 799 4.339872 TGCATTTTCACAAGCATTTCCT 57.660 36.364 0.00 0.00 31.05 3.36
801 802 5.221402 TGCATTTTCACAAGCATTTCCTGTA 60.221 36.000 0.00 0.00 31.05 2.74
803 804 4.481930 TTTCACAAGCATTTCCTGTACG 57.518 40.909 0.00 0.00 0.00 3.67
848 850 4.672899 CTCCAAAATAGGGTGGGAAAGAA 58.327 43.478 0.00 0.00 35.46 2.52
852 854 5.178061 CAAAATAGGGTGGGAAAGAAATGC 58.822 41.667 0.00 0.00 0.00 3.56
876 878 6.423001 GCAAAAATGAAAGAGACAGCAGAAAT 59.577 34.615 0.00 0.00 0.00 2.17
879 881 6.414408 AATGAAAGAGACAGCAGAAATACG 57.586 37.500 0.00 0.00 0.00 3.06
880 882 5.134202 TGAAAGAGACAGCAGAAATACGA 57.866 39.130 0.00 0.00 0.00 3.43
883 885 6.650807 TGAAAGAGACAGCAGAAATACGAATT 59.349 34.615 0.00 0.00 0.00 2.17
884 886 7.173218 TGAAAGAGACAGCAGAAATACGAATTT 59.827 33.333 0.00 0.00 38.03 1.82
885 887 7.440523 AAGAGACAGCAGAAATACGAATTTT 57.559 32.000 0.00 0.00 35.41 1.82
928 938 8.574251 TTTTAATGAAAATCCTCCAGATTCGA 57.426 30.769 0.00 0.00 44.75 3.71
930 940 4.142609 TGAAAATCCTCCAGATTCGAGG 57.857 45.455 0.00 0.00 44.75 4.63
940 989 4.189188 ATTCGAGGACGCGACCGG 62.189 66.667 21.40 17.06 40.42 5.28
969 1021 4.643387 AAAACCCTCGCGCTGGCT 62.643 61.111 5.56 0.00 36.88 4.75
993 1045 2.028112 GCAATTTCCCCACTTTTCCCTC 60.028 50.000 0.00 0.00 0.00 4.30
994 1046 2.567169 CAATTTCCCCACTTTTCCCTCC 59.433 50.000 0.00 0.00 0.00 4.30
995 1047 1.236708 TTTCCCCACTTTTCCCTCCA 58.763 50.000 0.00 0.00 0.00 3.86
996 1048 0.481128 TTCCCCACTTTTCCCTCCAC 59.519 55.000 0.00 0.00 0.00 4.02
997 1049 0.699577 TCCCCACTTTTCCCTCCACA 60.700 55.000 0.00 0.00 0.00 4.17
998 1050 0.187361 CCCCACTTTTCCCTCCACAA 59.813 55.000 0.00 0.00 0.00 3.33
999 1051 1.620822 CCCACTTTTCCCTCCACAAG 58.379 55.000 0.00 0.00 0.00 3.16
1000 1052 0.961753 CCACTTTTCCCTCCACAAGC 59.038 55.000 0.00 0.00 0.00 4.01
1001 1053 0.593128 CACTTTTCCCTCCACAAGCG 59.407 55.000 0.00 0.00 0.00 4.68
1002 1054 1.172812 ACTTTTCCCTCCACAAGCGC 61.173 55.000 0.00 0.00 0.00 5.92
1003 1055 1.152860 TTTTCCCTCCACAAGCGCA 60.153 52.632 11.47 0.00 0.00 6.09
1004 1056 0.753479 TTTTCCCTCCACAAGCGCAA 60.753 50.000 11.47 0.00 0.00 4.85
1005 1057 1.172180 TTTCCCTCCACAAGCGCAAG 61.172 55.000 11.47 3.32 43.44 4.01
1006 1058 3.058160 CCCTCCACAAGCGCAAGG 61.058 66.667 11.47 5.55 38.28 3.61
1273 1669 2.281276 ACGGAAAACTCACCCCGC 60.281 61.111 0.00 0.00 45.29 6.13
1295 1691 2.103941 CTCCTCTACTCCCATGCCTTTC 59.896 54.545 0.00 0.00 0.00 2.62
1444 1841 3.249799 CGTGACTTGATTTTGTACTGGCA 59.750 43.478 0.00 0.00 0.00 4.92
1466 1863 0.463654 TCGTGGCTGTATGGATTGGC 60.464 55.000 0.00 0.00 0.00 4.52
1467 1864 1.775039 CGTGGCTGTATGGATTGGCG 61.775 60.000 0.00 0.00 0.00 5.69
1474 1871 1.134521 TGTATGGATTGGCGGTCTGAC 60.135 52.381 0.00 0.00 0.00 3.51
1559 1956 1.056700 AGAAGGTCACACTGCCACCT 61.057 55.000 0.00 0.00 42.72 4.00
1644 2041 2.680913 GCCTGTGTGATGTCGGTGC 61.681 63.158 0.00 0.00 0.00 5.01
1658 2063 1.295423 GGTGCTAGCCCGAGAAACA 59.705 57.895 13.29 0.00 0.00 2.83
1719 2125 3.613193 CGGTGGTTTCACACTCGAGAATA 60.613 47.826 21.68 0.00 45.32 1.75
1756 2162 3.466836 GATTATGAACCGATGACAGGCA 58.533 45.455 0.00 0.00 0.00 4.75
1817 2223 5.934781 ACTATGAAGATAAGCAGGGGAAAG 58.065 41.667 0.00 0.00 0.00 2.62
1870 2282 1.528586 CTCAGAACCACAACTTCAGCG 59.471 52.381 0.00 0.00 0.00 5.18
1929 2341 3.576078 TCATGGAACCACAACTTCAGT 57.424 42.857 0.00 0.00 0.00 3.41
1934 2346 5.304686 TGGAACCACAACTTCAGTAGAAT 57.695 39.130 0.00 0.00 32.31 2.40
1939 2351 7.435192 GGAACCACAACTTCAGTAGAATTTTTG 59.565 37.037 0.00 0.00 32.31 2.44
1964 2376 7.659390 TGACAATTTTTCACACCTTTTGAGTTT 59.341 29.630 0.00 0.00 0.00 2.66
1965 2377 8.389779 ACAATTTTTCACACCTTTTGAGTTTT 57.610 26.923 0.00 0.00 0.00 2.43
2005 2421 7.380065 CGATAACTCTTGCTCTAACTATTCACC 59.620 40.741 0.00 0.00 0.00 4.02
2021 2437 2.084930 ACCCAGCACCCAAACCTCT 61.085 57.895 0.00 0.00 0.00 3.69
2070 2487 2.695666 GCCCACTCATCAGAGCTTACTA 59.304 50.000 0.00 0.00 46.09 1.82
2075 2492 7.151308 CCCACTCATCAGAGCTTACTAAATAG 58.849 42.308 0.00 0.00 46.09 1.73
2077 2494 8.584157 CCACTCATCAGAGCTTACTAAATAGAT 58.416 37.037 0.00 0.00 46.09 1.98
2093 2510 4.706842 ATAGATACGGCCCTGTCAATTT 57.293 40.909 0.00 0.00 0.00 1.82
2116 2533 5.515106 TCCCCTAAACAGAATACAAATGGG 58.485 41.667 0.00 0.00 0.00 4.00
2142 2559 4.082081 TGTCAATGGGCATTGCTCTAAAAG 60.082 41.667 10.41 0.00 45.77 2.27
2232 2649 5.163913 GCAACTCAATCTGCAAGTGTAGTAG 60.164 44.000 0.00 0.00 38.48 2.57
2273 2690 5.456822 GCTTGAATTATGGCTCGAAATGTTC 59.543 40.000 0.00 0.00 0.00 3.18
2296 2713 8.852135 GTTCTTCAGTGATATAGGTAGCTACTT 58.148 37.037 22.74 18.24 0.00 2.24
2330 2747 9.654663 AAAGAAATATAAGAGCGTTTAGACACT 57.345 29.630 0.00 0.00 0.00 3.55
2332 2749 9.733219 AGAAATATAAGAGCGTTTAGACACTAC 57.267 33.333 0.00 0.00 0.00 2.73
2333 2750 9.733219 GAAATATAAGAGCGTTTAGACACTACT 57.267 33.333 0.00 0.00 0.00 2.57
2396 2813 9.797556 GGAGTATGTTTTTAGTTTCTGTTTGTT 57.202 29.630 0.00 0.00 0.00 2.83
2436 2853 1.462731 GCATGACAACAGGGGCACAA 61.463 55.000 0.00 0.00 0.00 3.33
2659 3076 2.360801 TGCCAACTTTGCAAGGACTTAC 59.639 45.455 16.36 1.44 35.40 2.34
2711 3128 5.538849 AGCTAGAAGATAAAGCTGGTACC 57.461 43.478 4.43 4.43 44.67 3.34
2773 3190 2.126882 CCCAATGTGGACTCCTGGATA 58.873 52.381 0.00 0.00 40.96 2.59
2786 3203 6.716628 GGACTCCTGGATATTTTATGCATGAA 59.283 38.462 10.16 4.23 0.00 2.57
2827 3244 5.163302 TCATACGCATAATTTTCCAACCG 57.837 39.130 0.00 0.00 0.00 4.44
2842 3259 7.883391 TTTCCAACCGCCTTGAATTATTATA 57.117 32.000 0.00 0.00 30.42 0.98
3045 3466 9.341078 TCTGTGCATAATGATTGTAATACATGT 57.659 29.630 2.69 2.69 0.00 3.21
3146 3567 2.622436 CTTTCTCTTTACCAGCGGGAG 58.378 52.381 10.86 0.00 38.05 4.30
3150 3571 0.040646 TCTTTACCAGCGGGAGAGGA 59.959 55.000 10.86 0.27 38.05 3.71
3167 3588 5.234466 AGAGGAAGAACTGCAACTGTATT 57.766 39.130 0.00 0.00 0.00 1.89
3256 3677 5.248380 ACTTGGAGAGCTAATTTGGAGTT 57.752 39.130 0.00 0.00 0.00 3.01
3319 3740 4.519350 CCATGAGCAGCAATTGAGATATGT 59.481 41.667 10.34 0.00 0.00 2.29
3328 3749 7.521748 GCAGCAATTGAGATATGTATCTTGCTT 60.522 37.037 17.80 7.09 42.64 3.91
3383 3804 8.549338 ACTGCTCTTAATTCTTACCTAAACAC 57.451 34.615 0.00 0.00 0.00 3.32
3430 3851 0.800012 TTAACCGTGAATGCTTCCGC 59.200 50.000 0.00 0.00 0.00 5.54
3453 3874 5.412904 GCTCCCTAATATCACAAGTAATGGC 59.587 44.000 0.00 0.00 0.00 4.40
3627 4049 3.490348 AGCATACATTTGCCTATCCCAC 58.510 45.455 0.00 0.00 43.83 4.61
3663 4088 0.748367 GGCCTTAGCAAGTACCTGCC 60.748 60.000 12.86 0.00 43.73 4.85
3678 4103 4.820894 ACCTGCCTAACTACTTTACTGG 57.179 45.455 0.00 0.00 0.00 4.00
3695 4120 2.906389 ACTGGATGTACTTCAAGGCTCA 59.094 45.455 15.61 1.78 0.00 4.26
3728 4153 6.782494 TGAGTCAAGAGGTGCATATCCTATTA 59.218 38.462 1.77 0.00 34.78 0.98
3743 4174 9.823647 CATATCCTATTAGTCAACTGTTGAACT 57.176 33.333 23.55 21.95 42.15 3.01
3767 4198 6.826668 TGACTGAGTTGTTGGATCTAGAAAA 58.173 36.000 0.00 0.00 0.00 2.29
3885 4316 4.265073 CAGGAGCTTACTTACCTGCAAAT 58.735 43.478 4.12 0.00 42.30 2.32
3918 4349 3.859411 AACTTTCCAGTTGTTTTGCGA 57.141 38.095 0.00 0.00 42.05 5.10
3919 4350 3.859411 ACTTTCCAGTTGTTTTGCGAA 57.141 38.095 0.00 0.00 0.00 4.70
3920 4351 4.385358 ACTTTCCAGTTGTTTTGCGAAT 57.615 36.364 0.00 0.00 0.00 3.34
3921 4352 4.754322 ACTTTCCAGTTGTTTTGCGAATT 58.246 34.783 0.00 0.00 0.00 2.17
3922 4353 5.175127 ACTTTCCAGTTGTTTTGCGAATTT 58.825 33.333 0.00 0.00 0.00 1.82
4021 4470 6.071616 GCCTGTATGTTGGTTAATCCTTGAAA 60.072 38.462 0.00 0.00 37.07 2.69
4030 4479 5.106078 TGGTTAATCCTTGAAATTACGGTGC 60.106 40.000 0.00 0.00 37.07 5.01
4031 4480 5.106078 GGTTAATCCTTGAAATTACGGTGCA 60.106 40.000 0.00 0.00 0.00 4.57
4032 4481 4.701956 AATCCTTGAAATTACGGTGCAG 57.298 40.909 0.00 0.00 0.00 4.41
4048 4497 2.238898 GTGCAGTCCTAACACCCCTATT 59.761 50.000 0.00 0.00 0.00 1.73
4067 4516 9.675464 CCCCTATTATGTTCTGTTTGTTAGTTA 57.325 33.333 0.00 0.00 0.00 2.24
4129 4578 0.251916 TGAAGGTCCCTTATGTGCCG 59.748 55.000 0.00 0.00 36.26 5.69
4147 4596 2.691409 CGGAAGGTCTTGAAGCCATA 57.309 50.000 8.07 0.00 0.00 2.74
4213 4662 2.851195 CAAGCTACAGTCAGTGGGTTT 58.149 47.619 0.00 0.00 45.50 3.27
4251 4700 4.101430 AGAAAATGTGTTCAAGGTTGGCAT 59.899 37.500 0.00 0.00 0.00 4.40
4260 4709 3.620488 TCAAGGTTGGCATGAGTTATCC 58.380 45.455 0.00 0.00 0.00 2.59
4262 4711 1.134098 AGGTTGGCATGAGTTATCCCG 60.134 52.381 0.00 0.00 0.00 5.14
4269 4718 2.791158 GCATGAGTTATCCCGTTTTGCG 60.791 50.000 0.00 0.00 40.95 4.85
4274 4723 2.418628 AGTTATCCCGTTTTGCGTCATG 59.581 45.455 0.00 0.00 39.32 3.07
4330 4779 4.710375 ACGATGAACTGGTTCTAGGTATGT 59.290 41.667 13.54 2.21 40.14 2.29
4393 4842 3.921677 TGTACTCGATGGGAAGTTTGAC 58.078 45.455 0.00 0.00 0.00 3.18
4444 4893 3.039011 TGATTTGGGCTACTCTCCTACC 58.961 50.000 0.00 0.00 0.00 3.18
4456 4905 3.890147 ACTCTCCTACCGACATAATCACC 59.110 47.826 0.00 0.00 0.00 4.02
4548 4997 3.004315 CCAGTCTTGTTGTTTATGCCGTT 59.996 43.478 0.00 0.00 0.00 4.44
4567 5016 5.665459 CCGTTGTCTCTTCTGATTTATCCT 58.335 41.667 0.00 0.00 0.00 3.24
4575 5024 7.491048 GTCTCTTCTGATTTATCCTGTCAACTC 59.509 40.741 0.00 0.00 0.00 3.01
4578 5027 7.604164 TCTTCTGATTTATCCTGTCAACTCAAC 59.396 37.037 0.00 0.00 0.00 3.18
4589 5038 5.973565 CCTGTCAACTCAACTTTCATGTTTC 59.026 40.000 0.00 0.00 0.00 2.78
4595 5048 3.872354 TCAACTTTCATGTTTCTTCGCG 58.128 40.909 0.00 0.00 0.00 5.87
4601 5054 0.095935 CATGTTTCTTCGCGCAGGAG 59.904 55.000 8.75 4.54 0.00 3.69
4604 5057 0.944311 GTTTCTTCGCGCAGGAGACA 60.944 55.000 8.75 0.00 0.00 3.41
4658 5111 2.095461 GGGTCATTCCTTCAGCTTTCC 58.905 52.381 0.00 0.00 36.25 3.13
4688 5141 1.242076 CCAAGTTTGCTCTGGTGAGG 58.758 55.000 0.00 0.00 40.53 3.86
4697 5150 0.322008 CTCTGGTGAGGGAAACAGCC 60.322 60.000 0.00 0.00 36.70 4.85
4700 5153 0.260230 TGGTGAGGGAAACAGCCAAA 59.740 50.000 0.00 0.00 35.30 3.28
4703 5156 1.172180 TGAGGGAAACAGCCAAAGCG 61.172 55.000 0.00 0.00 46.67 4.68
4745 5198 5.523552 TCTGACATCAGTTAACAGTGTTGTG 59.476 40.000 18.90 12.58 44.12 3.33
4750 5203 3.247411 TCAGTTAACAGTGTTGTGATGCG 59.753 43.478 18.90 1.15 37.67 4.73
4753 5206 4.994852 AGTTAACAGTGTTGTGATGCGTAT 59.005 37.500 18.90 0.00 37.67 3.06
4764 5218 5.017294 TGTGATGCGTATCCTGTTTATCA 57.983 39.130 11.17 0.00 32.09 2.15
4766 5220 4.048504 TGATGCGTATCCTGTTTATCACG 58.951 43.478 11.17 0.00 32.09 4.35
4775 5229 4.079970 TCCTGTTTATCACGACTCTGTCT 58.920 43.478 0.00 0.00 0.00 3.41
4825 5279 7.097192 TCTTCGCTGAAGTGAACTATTTATGT 58.903 34.615 14.86 0.00 40.24 2.29
4835 5289 9.607285 AAGTGAACTATTTATGTTTGTTTAGCG 57.393 29.630 0.00 0.00 0.00 4.26
5091 5546 7.517321 TCATTTCCTTGCATTTTTATTTTCGC 58.483 30.769 0.00 0.00 0.00 4.70
5129 5585 5.992217 GTCCAACTGTCTGAACTTATGAACT 59.008 40.000 0.00 0.00 0.00 3.01
5138 5594 8.201464 TGTCTGAACTTATGAACTGAGTTTACA 58.799 33.333 0.00 0.00 34.09 2.41
5139 5595 9.042008 GTCTGAACTTATGAACTGAGTTTACAA 57.958 33.333 0.00 0.00 34.09 2.41
5140 5596 9.607988 TCTGAACTTATGAACTGAGTTTACAAA 57.392 29.630 0.00 0.00 34.09 2.83
5141 5597 9.869844 CTGAACTTATGAACTGAGTTTACAAAG 57.130 33.333 0.00 5.97 34.09 2.77
5142 5598 9.607988 TGAACTTATGAACTGAGTTTACAAAGA 57.392 29.630 16.05 0.00 34.09 2.52
5144 5600 8.089115 ACTTATGAACTGAGTTTACAAAGAGC 57.911 34.615 16.05 0.00 0.00 4.09
5145 5601 5.948992 ATGAACTGAGTTTACAAAGAGCC 57.051 39.130 0.00 0.00 0.00 4.70
5149 5605 6.151985 TGAACTGAGTTTACAAAGAGCCAAAA 59.848 34.615 0.00 0.00 0.00 2.44
5165 5621 5.583932 AGCCAAAATGGTCTTCTAATCCTT 58.416 37.500 0.00 0.00 40.46 3.36
5170 5626 7.340487 CCAAAATGGTCTTCTAATCCTTAGCTT 59.660 37.037 0.00 0.00 31.00 3.74
5171 5627 7.872113 AAATGGTCTTCTAATCCTTAGCTTG 57.128 36.000 0.00 0.00 33.23 4.01
5181 5637 7.341805 TCTAATCCTTAGCTTGAATGCTCTTT 58.658 34.615 0.00 0.00 42.97 2.52
5183 5639 4.265073 TCCTTAGCTTGAATGCTCTTTCC 58.735 43.478 0.00 0.00 42.97 3.13
5198 5654 9.866655 AATGCTCTTTCCATGGATAGTAAAATA 57.133 29.630 25.78 9.64 0.00 1.40
5258 5716 3.384146 TCTCACAACAAACATTGCATGGT 59.616 39.130 0.00 0.00 32.47 3.55
5269 5729 1.412079 TTGCATGGTTTTCTGCCTGT 58.588 45.000 0.00 0.00 37.59 4.00
5312 5774 4.042809 TCACATTTGTGGAGGTCTGGTAAT 59.957 41.667 10.60 0.00 45.65 1.89
5313 5775 4.766891 CACATTTGTGGAGGTCTGGTAATT 59.233 41.667 2.69 0.00 42.10 1.40
5314 5776 5.243730 CACATTTGTGGAGGTCTGGTAATTT 59.756 40.000 2.69 0.00 42.10 1.82
5315 5777 5.838521 ACATTTGTGGAGGTCTGGTAATTTT 59.161 36.000 0.00 0.00 0.00 1.82
5382 5844 7.481275 TTTTGGAGCATTGATTTTGTTTCTC 57.519 32.000 0.00 0.00 0.00 2.87
5451 5913 9.577110 CATGTATGCAGAAAATTCAGTAATGTT 57.423 29.630 0.00 0.00 0.00 2.71
5453 5915 9.409312 TGTATGCAGAAAATTCAGTAATGTTTG 57.591 29.630 0.00 0.00 0.00 2.93
5454 5916 9.410556 GTATGCAGAAAATTCAGTAATGTTTGT 57.589 29.630 0.00 0.00 0.00 2.83
5455 5917 8.891671 ATGCAGAAAATTCAGTAATGTTTGTT 57.108 26.923 0.00 0.00 0.00 2.83
5456 5918 8.129161 TGCAGAAAATTCAGTAATGTTTGTTG 57.871 30.769 0.00 0.00 0.00 3.33
5457 5919 7.065283 GCAGAAAATTCAGTAATGTTTGTTGC 58.935 34.615 0.00 0.00 0.00 4.17
5458 5920 7.275785 CAGAAAATTCAGTAATGTTTGTTGCG 58.724 34.615 0.00 0.00 0.00 4.85
5459 5921 7.167302 CAGAAAATTCAGTAATGTTTGTTGCGA 59.833 33.333 0.00 0.00 0.00 5.10
5460 5922 7.704472 AGAAAATTCAGTAATGTTTGTTGCGAA 59.296 29.630 0.00 0.00 0.00 4.70
5461 5923 7.763172 AAATTCAGTAATGTTTGTTGCGAAA 57.237 28.000 0.00 0.00 0.00 3.46
5462 5924 7.763172 AATTCAGTAATGTTTGTTGCGAAAA 57.237 28.000 0.00 0.00 0.00 2.29
5463 5925 6.804534 TTCAGTAATGTTTGTTGCGAAAAG 57.195 33.333 0.00 0.00 0.00 2.27
5464 5926 5.885881 TCAGTAATGTTTGTTGCGAAAAGT 58.114 33.333 0.00 0.00 0.00 2.66
5465 5927 5.968848 TCAGTAATGTTTGTTGCGAAAAGTC 59.031 36.000 0.00 0.00 0.00 3.01
5466 5928 5.971202 CAGTAATGTTTGTTGCGAAAAGTCT 59.029 36.000 0.00 0.00 0.00 3.24
5467 5929 6.472163 CAGTAATGTTTGTTGCGAAAAGTCTT 59.528 34.615 0.00 0.00 0.00 3.01
5468 5930 5.701029 AATGTTTGTTGCGAAAAGTCTTG 57.299 34.783 0.00 0.00 0.00 3.02
5469 5931 4.427096 TGTTTGTTGCGAAAAGTCTTGA 57.573 36.364 0.00 0.00 0.00 3.02
5470 5932 4.411327 TGTTTGTTGCGAAAAGTCTTGAG 58.589 39.130 0.00 0.00 0.00 3.02
5471 5933 4.155099 TGTTTGTTGCGAAAAGTCTTGAGA 59.845 37.500 0.00 0.00 0.00 3.27
5472 5934 5.163663 TGTTTGTTGCGAAAAGTCTTGAGAT 60.164 36.000 0.00 0.00 0.00 2.75
5473 5935 6.037720 TGTTTGTTGCGAAAAGTCTTGAGATA 59.962 34.615 0.00 0.00 0.00 1.98
5474 5936 6.801539 TTGTTGCGAAAAGTCTTGAGATAT 57.198 33.333 0.00 0.00 0.00 1.63
5475 5937 6.801539 TGTTGCGAAAAGTCTTGAGATATT 57.198 33.333 0.00 0.00 0.00 1.28
5476 5938 7.202016 TGTTGCGAAAAGTCTTGAGATATTT 57.798 32.000 0.00 0.00 0.00 1.40
5477 5939 7.648142 TGTTGCGAAAAGTCTTGAGATATTTT 58.352 30.769 0.00 6.61 32.30 1.82
5478 5940 8.134895 TGTTGCGAAAAGTCTTGAGATATTTTT 58.865 29.630 0.00 5.18 30.86 1.94
5499 5961 6.839124 TTTTTACTGTTCATGATGATGCCT 57.161 33.333 0.00 0.00 0.00 4.75
5500 5962 6.839124 TTTTACTGTTCATGATGATGCCTT 57.161 33.333 0.00 0.00 0.00 4.35
5501 5963 6.839124 TTTACTGTTCATGATGATGCCTTT 57.161 33.333 0.00 0.00 0.00 3.11
5502 5964 6.839124 TTACTGTTCATGATGATGCCTTTT 57.161 33.333 0.00 0.00 0.00 2.27
5503 5965 5.068234 ACTGTTCATGATGATGCCTTTTG 57.932 39.130 0.00 0.00 0.00 2.44
5504 5966 4.768448 ACTGTTCATGATGATGCCTTTTGA 59.232 37.500 0.00 0.00 0.00 2.69
5505 5967 5.105877 ACTGTTCATGATGATGCCTTTTGAG 60.106 40.000 0.00 0.00 0.00 3.02
5506 5968 4.110482 GTTCATGATGATGCCTTTTGAGC 58.890 43.478 0.00 0.00 0.00 4.26
5597 6142 5.297776 CCATGATGTTGAATGTTACTCCCTC 59.702 44.000 0.00 0.00 0.00 4.30
5599 6144 4.288366 TGATGTTGAATGTTACTCCCTCCA 59.712 41.667 0.00 0.00 0.00 3.86
5602 6147 5.640147 TGTTGAATGTTACTCCCTCCATTT 58.360 37.500 0.00 0.00 0.00 2.32
5609 6154 8.893563 AATGTTACTCCCTCCATTTCAAAATA 57.106 30.769 0.00 0.00 0.00 1.40
5615 6160 6.434340 ACTCCCTCCATTTCAAAATAAGTGTC 59.566 38.462 0.00 0.00 0.00 3.67
5616 6161 6.310941 TCCCTCCATTTCAAAATAAGTGTCA 58.689 36.000 0.00 0.00 0.00 3.58
5619 6164 7.037438 CCTCCATTTCAAAATAAGTGTCATGG 58.963 38.462 0.00 0.00 32.40 3.66
5620 6165 7.309990 CCTCCATTTCAAAATAAGTGTCATGGT 60.310 37.037 0.00 0.00 32.71 3.55
5621 6166 7.961351 TCCATTTCAAAATAAGTGTCATGGTT 58.039 30.769 0.00 0.00 32.71 3.67
5622 6167 8.428063 TCCATTTCAAAATAAGTGTCATGGTTT 58.572 29.630 0.00 0.00 32.71 3.27
5623 6168 9.054922 CCATTTCAAAATAAGTGTCATGGTTTT 57.945 29.630 0.00 0.00 0.00 2.43
5628 6173 9.959749 TCAAAATAAGTGTCATGGTTTTAGTTC 57.040 29.630 0.00 0.00 0.00 3.01
5629 6174 9.743057 CAAAATAAGTGTCATGGTTTTAGTTCA 57.257 29.630 0.00 0.00 0.00 3.18
5632 6177 9.744468 AATAAGTGTCATGGTTTTAGTTCAAAC 57.256 29.630 0.00 0.00 36.12 2.93
5633 6178 7.404671 AAGTGTCATGGTTTTAGTTCAAACT 57.595 32.000 0.46 0.46 42.91 2.66
5670 6215 4.466827 ACAGTTATTTTGAAACGGAGGGT 58.533 39.130 0.00 0.00 32.00 4.34
5682 6227 1.275291 ACGGAGGGTGTACATGACAAG 59.725 52.381 0.00 0.00 40.66 3.16
5726 6280 6.212235 TCTTTCTAATGATGACTGATCGCTC 58.788 40.000 0.00 0.00 33.17 5.03
5728 6282 2.145958 AATGATGACTGATCGCTCGG 57.854 50.000 0.00 0.00 33.17 4.63
5776 6330 2.098443 TGCCTCAAAAGAAACCGAACAC 59.902 45.455 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.014128 CTTTATGTGGGGCGTTACCAG 58.986 52.381 0.00 0.00 42.05 4.00
2 3 1.741145 CACTTTATGTGGGGCGTTACC 59.259 52.381 0.00 0.00 42.68 2.85
3 4 1.131693 GCACTTTATGTGGGGCGTTAC 59.868 52.381 0.56 0.00 46.27 2.50
4 5 1.455248 GCACTTTATGTGGGGCGTTA 58.545 50.000 0.56 0.00 46.27 3.18
5 6 1.248101 GGCACTTTATGTGGGGCGTT 61.248 55.000 0.56 0.00 46.27 4.84
6 7 1.677633 GGCACTTTATGTGGGGCGT 60.678 57.895 0.56 0.00 46.27 5.68
7 8 1.378514 AGGCACTTTATGTGGGGCG 60.379 57.895 0.56 0.00 46.27 6.13
8 9 4.764143 AGGCACTTTATGTGGGGC 57.236 55.556 0.56 0.00 46.27 5.80
31 32 9.780186 GGCCTGTAATCAAGTAGACTTTATAAT 57.220 33.333 0.00 0.00 33.11 1.28
32 33 7.924412 CGGCCTGTAATCAAGTAGACTTTATAA 59.076 37.037 0.00 0.00 33.11 0.98
33 34 7.069085 ACGGCCTGTAATCAAGTAGACTTTATA 59.931 37.037 0.00 0.00 33.11 0.98
34 35 6.127140 ACGGCCTGTAATCAAGTAGACTTTAT 60.127 38.462 0.00 0.00 33.11 1.40
35 36 5.186409 ACGGCCTGTAATCAAGTAGACTTTA 59.814 40.000 0.00 0.00 33.11 1.85
36 37 4.020485 ACGGCCTGTAATCAAGTAGACTTT 60.020 41.667 0.00 0.00 33.11 2.66
37 38 3.514309 ACGGCCTGTAATCAAGTAGACTT 59.486 43.478 0.00 0.00 36.45 3.01
38 39 3.097614 ACGGCCTGTAATCAAGTAGACT 58.902 45.455 0.00 0.00 0.00 3.24
39 40 3.521947 ACGGCCTGTAATCAAGTAGAC 57.478 47.619 0.00 0.00 0.00 2.59
40 41 3.857052 CAACGGCCTGTAATCAAGTAGA 58.143 45.455 0.00 0.00 0.00 2.59
41 42 2.351726 GCAACGGCCTGTAATCAAGTAG 59.648 50.000 0.00 0.00 0.00 2.57
42 43 2.289756 TGCAACGGCCTGTAATCAAGTA 60.290 45.455 0.00 0.00 40.13 2.24
43 44 1.165270 GCAACGGCCTGTAATCAAGT 58.835 50.000 0.00 0.00 0.00 3.16
44 45 1.164411 TGCAACGGCCTGTAATCAAG 58.836 50.000 0.00 0.00 40.13 3.02
45 46 1.610363 TTGCAACGGCCTGTAATCAA 58.390 45.000 0.00 3.61 40.13 2.57
46 47 1.472082 CATTGCAACGGCCTGTAATCA 59.528 47.619 0.00 0.00 40.13 2.57
47 48 1.798813 GCATTGCAACGGCCTGTAATC 60.799 52.381 12.66 0.00 40.13 1.75
48 49 0.173255 GCATTGCAACGGCCTGTAAT 59.827 50.000 12.66 1.32 40.13 1.89
49 50 1.175347 TGCATTGCAACGGCCTGTAA 61.175 50.000 18.98 0.00 40.13 2.41
50 51 1.585267 CTGCATTGCAACGGCCTGTA 61.585 55.000 18.98 5.24 38.41 2.74
51 52 2.911509 TGCATTGCAACGGCCTGT 60.912 55.556 18.98 0.00 40.13 4.00
52 53 2.126228 CTGCATTGCAACGGCCTG 60.126 61.111 18.98 7.44 38.41 4.85
53 54 2.282391 TCTGCATTGCAACGGCCT 60.282 55.556 18.98 0.00 38.41 5.19
54 55 2.180017 CTCTGCATTGCAACGGCC 59.820 61.111 18.98 0.00 38.41 6.13
55 56 1.443194 CACTCTGCATTGCAACGGC 60.443 57.895 13.18 15.93 38.41 5.68
56 57 1.443194 GCACTCTGCATTGCAACGG 60.443 57.895 13.18 8.01 44.26 4.44
57 58 4.141883 GCACTCTGCATTGCAACG 57.858 55.556 13.18 8.83 44.26 4.10
71 72 0.908198 ATCAGGAGGTCAAGAGGCAC 59.092 55.000 0.00 0.00 0.00 5.01
72 73 0.907486 CATCAGGAGGTCAAGAGGCA 59.093 55.000 0.00 0.00 0.00 4.75
73 74 0.179936 CCATCAGGAGGTCAAGAGGC 59.820 60.000 0.00 0.00 36.89 4.70
74 75 1.577736 ACCATCAGGAGGTCAAGAGG 58.422 55.000 0.00 0.00 38.69 3.69
81 82 0.039764 TCACTCGACCATCAGGAGGT 59.960 55.000 0.00 0.00 43.46 3.85
82 83 0.743688 CTCACTCGACCATCAGGAGG 59.256 60.000 0.00 0.00 38.69 4.30
83 84 1.403679 GACTCACTCGACCATCAGGAG 59.596 57.143 0.00 0.00 38.69 3.69
84 85 1.004862 AGACTCACTCGACCATCAGGA 59.995 52.381 0.00 0.00 38.69 3.86
85 86 1.468985 AGACTCACTCGACCATCAGG 58.531 55.000 0.00 0.00 42.21 3.86
86 87 2.477021 CGAAGACTCACTCGACCATCAG 60.477 54.545 0.00 0.00 0.00 2.90
87 88 1.468914 CGAAGACTCACTCGACCATCA 59.531 52.381 0.00 0.00 0.00 3.07
88 89 1.469308 ACGAAGACTCACTCGACCATC 59.531 52.381 2.16 0.00 0.00 3.51
89 90 1.200252 CACGAAGACTCACTCGACCAT 59.800 52.381 2.16 0.00 0.00 3.55
90 91 0.591659 CACGAAGACTCACTCGACCA 59.408 55.000 2.16 0.00 0.00 4.02
91 92 0.109689 CCACGAAGACTCACTCGACC 60.110 60.000 2.16 0.00 0.00 4.79
92 93 0.592148 ACCACGAAGACTCACTCGAC 59.408 55.000 2.16 0.00 0.00 4.20
93 94 0.873054 GACCACGAAGACTCACTCGA 59.127 55.000 2.16 0.00 0.00 4.04
94 95 0.452950 CGACCACGAAGACTCACTCG 60.453 60.000 0.00 0.00 42.66 4.18
95 96 0.873054 TCGACCACGAAGACTCACTC 59.127 55.000 0.00 0.00 45.74 3.51
96 97 3.016997 TCGACCACGAAGACTCACT 57.983 52.632 0.00 0.00 45.74 3.41
105 106 0.596577 CTTGAAGGACTCGACCACGA 59.403 55.000 0.00 0.00 46.56 4.35
106 107 0.314302 ACTTGAAGGACTCGACCACG 59.686 55.000 0.00 0.00 41.26 4.94
107 108 1.340248 TGACTTGAAGGACTCGACCAC 59.660 52.381 0.00 0.00 0.00 4.16
108 109 1.613925 CTGACTTGAAGGACTCGACCA 59.386 52.381 0.00 0.00 0.00 4.02
109 110 1.614413 ACTGACTTGAAGGACTCGACC 59.386 52.381 0.00 0.00 0.00 4.79
110 111 2.666069 CGACTGACTTGAAGGACTCGAC 60.666 54.545 0.00 0.00 0.00 4.20
111 112 1.535896 CGACTGACTTGAAGGACTCGA 59.464 52.381 0.00 0.00 0.00 4.04
112 113 1.535896 TCGACTGACTTGAAGGACTCG 59.464 52.381 0.00 0.00 0.00 4.18
113 114 2.554893 ACTCGACTGACTTGAAGGACTC 59.445 50.000 0.00 0.00 0.00 3.36
114 115 2.294791 CACTCGACTGACTTGAAGGACT 59.705 50.000 0.00 0.00 0.00 3.85
115 116 2.034812 ACACTCGACTGACTTGAAGGAC 59.965 50.000 0.00 0.00 0.00 3.85
116 117 2.034685 CACACTCGACTGACTTGAAGGA 59.965 50.000 0.00 0.00 0.00 3.36
117 118 2.223829 ACACACTCGACTGACTTGAAGG 60.224 50.000 0.00 0.00 0.00 3.46
118 119 3.046390 GACACACTCGACTGACTTGAAG 58.954 50.000 0.00 0.00 0.00 3.02
119 120 2.223735 GGACACACTCGACTGACTTGAA 60.224 50.000 0.00 0.00 0.00 2.69
120 121 1.337071 GGACACACTCGACTGACTTGA 59.663 52.381 0.00 0.00 0.00 3.02
121 122 1.603172 GGGACACACTCGACTGACTTG 60.603 57.143 0.00 0.00 0.00 3.16
122 123 0.674534 GGGACACACTCGACTGACTT 59.325 55.000 0.00 0.00 0.00 3.01
123 124 0.178987 AGGGACACACTCGACTGACT 60.179 55.000 0.00 0.00 0.00 3.41
124 125 0.241481 GAGGGACACACTCGACTGAC 59.759 60.000 0.00 0.00 0.00 3.51
125 126 2.642425 GAGGGACACACTCGACTGA 58.358 57.895 0.00 0.00 0.00 3.41
131 132 0.319641 GACCAACGAGGGACACACTC 60.320 60.000 4.18 0.00 43.89 3.51
132 133 1.746517 GACCAACGAGGGACACACT 59.253 57.895 4.18 0.00 43.89 3.55
133 134 1.663702 CGACCAACGAGGGACACAC 60.664 63.158 4.18 0.00 45.77 3.82
134 135 1.829096 TCGACCAACGAGGGACACA 60.829 57.895 4.18 0.00 46.45 3.72
135 136 3.045142 TCGACCAACGAGGGACAC 58.955 61.111 4.18 0.00 46.45 3.67
143 144 2.027625 GCCTTCCAGTCGACCAACG 61.028 63.158 13.01 0.00 44.09 4.10
144 145 2.027625 CGCCTTCCAGTCGACCAAC 61.028 63.158 13.01 0.00 0.00 3.77
145 146 2.204461 TCGCCTTCCAGTCGACCAA 61.204 57.895 13.01 1.85 0.00 3.67
146 147 2.599281 TCGCCTTCCAGTCGACCA 60.599 61.111 13.01 0.00 0.00 4.02
147 148 2.126031 GTCGCCTTCCAGTCGACC 60.126 66.667 13.01 0.00 44.62 4.79
149 150 2.282958 AGGTCGCCTTCCAGTCGA 60.283 61.111 0.00 0.00 0.00 4.20
150 151 1.878656 AAGAGGTCGCCTTCCAGTCG 61.879 60.000 0.00 0.00 31.76 4.18
151 152 0.108567 GAAGAGGTCGCCTTCCAGTC 60.109 60.000 0.00 0.00 35.26 3.51
152 153 0.543174 AGAAGAGGTCGCCTTCCAGT 60.543 55.000 0.00 0.00 40.54 4.00
153 154 1.475403 TAGAAGAGGTCGCCTTCCAG 58.525 55.000 0.00 0.00 40.54 3.86
154 155 1.825474 CTTAGAAGAGGTCGCCTTCCA 59.175 52.381 0.00 0.00 40.54 3.53
155 156 1.137282 CCTTAGAAGAGGTCGCCTTCC 59.863 57.143 0.00 0.00 40.54 3.46
156 157 2.100989 TCCTTAGAAGAGGTCGCCTTC 58.899 52.381 0.00 0.00 40.10 3.46
157 158 2.233305 TCCTTAGAAGAGGTCGCCTT 57.767 50.000 0.00 0.00 38.04 4.35
158 159 2.035632 CATCCTTAGAAGAGGTCGCCT 58.964 52.381 0.00 0.00 38.04 5.52
159 160 1.757699 ACATCCTTAGAAGAGGTCGCC 59.242 52.381 0.00 0.00 38.04 5.54
160 161 2.223852 GGACATCCTTAGAAGAGGTCGC 60.224 54.545 0.00 0.00 44.01 5.19
161 162 3.292460 AGGACATCCTTAGAAGAGGTCG 58.708 50.000 0.00 0.00 46.09 4.79
162 163 4.830600 CCTAGGACATCCTTAGAAGAGGTC 59.169 50.000 1.05 0.00 46.09 3.85
163 164 4.388118 CCCTAGGACATCCTTAGAAGAGGT 60.388 50.000 11.48 0.00 46.09 3.85
164 165 4.156477 CCCTAGGACATCCTTAGAAGAGG 58.844 52.174 11.48 5.53 46.09 3.69
165 166 4.810345 ACCCTAGGACATCCTTAGAAGAG 58.190 47.826 11.48 0.00 46.09 2.85
166 167 4.901785 ACCCTAGGACATCCTTAGAAGA 57.098 45.455 11.48 0.00 46.09 2.87
167 168 6.137559 ACTTACCCTAGGACATCCTTAGAAG 58.862 44.000 11.48 6.09 46.09 2.85
168 169 6.101274 ACTTACCCTAGGACATCCTTAGAA 57.899 41.667 11.48 0.00 46.09 2.10
169 170 5.745988 ACTTACCCTAGGACATCCTTAGA 57.254 43.478 11.48 0.00 46.09 2.10
170 171 7.068061 AGTAACTTACCCTAGGACATCCTTAG 58.932 42.308 11.48 2.12 46.09 2.18
171 172 6.989894 AGTAACTTACCCTAGGACATCCTTA 58.010 40.000 11.48 0.00 46.09 2.69
172 173 5.851418 AGTAACTTACCCTAGGACATCCTT 58.149 41.667 11.48 0.00 46.09 3.36
174 175 5.659971 TCAAGTAACTTACCCTAGGACATCC 59.340 44.000 11.48 0.00 0.00 3.51
175 176 6.786967 TCAAGTAACTTACCCTAGGACATC 57.213 41.667 11.48 0.00 0.00 3.06
176 177 7.750947 ATTCAAGTAACTTACCCTAGGACAT 57.249 36.000 11.48 0.00 0.00 3.06
177 178 7.563724 AATTCAAGTAACTTACCCTAGGACA 57.436 36.000 11.48 0.00 0.00 4.02
178 179 8.202811 CCTAATTCAAGTAACTTACCCTAGGAC 58.797 40.741 11.48 0.00 0.00 3.85
179 180 7.902941 ACCTAATTCAAGTAACTTACCCTAGGA 59.097 37.037 11.48 0.00 0.00 2.94
180 181 8.087303 ACCTAATTCAAGTAACTTACCCTAGG 57.913 38.462 0.06 0.06 0.00 3.02
181 182 8.202811 GGACCTAATTCAAGTAACTTACCCTAG 58.797 40.741 0.00 0.00 0.00 3.02
182 183 7.679453 TGGACCTAATTCAAGTAACTTACCCTA 59.321 37.037 0.00 0.00 0.00 3.53
183 184 6.502863 TGGACCTAATTCAAGTAACTTACCCT 59.497 38.462 0.00 0.00 0.00 4.34
184 185 6.714278 TGGACCTAATTCAAGTAACTTACCC 58.286 40.000 0.00 0.00 0.00 3.69
185 186 8.044908 TCATGGACCTAATTCAAGTAACTTACC 58.955 37.037 0.00 0.00 0.00 2.85
186 187 8.880750 GTCATGGACCTAATTCAAGTAACTTAC 58.119 37.037 0.00 0.00 0.00 2.34
188 189 7.923414 GTCATGGACCTAATTCAAGTAACTT 57.077 36.000 0.00 0.00 0.00 2.66
214 215 6.261435 TGATGGGGTTATGTACCTAGGATAG 58.739 44.000 17.98 0.00 46.86 2.08
215 216 6.235765 TGATGGGGTTATGTACCTAGGATA 57.764 41.667 17.98 0.00 46.86 2.59
216 217 5.101254 TGATGGGGTTATGTACCTAGGAT 57.899 43.478 17.98 0.48 46.86 3.24
217 218 4.562934 TGATGGGGTTATGTACCTAGGA 57.437 45.455 17.98 0.00 46.86 2.94
218 219 5.374071 GTTTGATGGGGTTATGTACCTAGG 58.626 45.833 7.41 7.41 46.86 3.02
219 220 5.054477 CGTTTGATGGGGTTATGTACCTAG 58.946 45.833 0.00 0.00 46.86 3.02
220 221 4.683942 GCGTTTGATGGGGTTATGTACCTA 60.684 45.833 0.00 0.00 46.86 3.08
221 222 3.881220 CGTTTGATGGGGTTATGTACCT 58.119 45.455 0.00 0.00 46.86 3.08
222 223 2.356695 GCGTTTGATGGGGTTATGTACC 59.643 50.000 0.00 0.00 46.99 3.34
223 224 2.356695 GGCGTTTGATGGGGTTATGTAC 59.643 50.000 0.00 0.00 0.00 2.90
224 225 2.645802 GGCGTTTGATGGGGTTATGTA 58.354 47.619 0.00 0.00 0.00 2.29
225 226 1.470051 GGCGTTTGATGGGGTTATGT 58.530 50.000 0.00 0.00 0.00 2.29
226 227 0.380378 CGGCGTTTGATGGGGTTATG 59.620 55.000 0.00 0.00 0.00 1.90
227 228 1.381165 GCGGCGTTTGATGGGGTTAT 61.381 55.000 9.37 0.00 0.00 1.89
228 229 2.041686 GCGGCGTTTGATGGGGTTA 61.042 57.895 9.37 0.00 0.00 2.85
229 230 3.370231 GCGGCGTTTGATGGGGTT 61.370 61.111 9.37 0.00 0.00 4.11
230 231 4.344865 AGCGGCGTTTGATGGGGT 62.345 61.111 9.37 0.00 0.00 4.95
231 232 3.508840 GAGCGGCGTTTGATGGGG 61.509 66.667 9.37 0.00 0.00 4.96
232 233 3.864686 CGAGCGGCGTTTGATGGG 61.865 66.667 9.37 0.00 34.64 4.00
233 234 4.520846 GCGAGCGGCGTTTGATGG 62.521 66.667 15.58 0.00 43.41 3.51
234 235 4.520846 GGCGAGCGGCGTTTGATG 62.521 66.667 15.58 0.00 44.92 3.07
235 236 2.916502 TATGGCGAGCGGCGTTTGAT 62.917 55.000 15.58 2.92 44.92 2.57
236 237 3.650907 TATGGCGAGCGGCGTTTGA 62.651 57.895 15.58 0.00 44.92 2.69
237 238 3.192230 TATGGCGAGCGGCGTTTG 61.192 61.111 16.18 7.88 44.92 2.93
238 239 3.192922 GTATGGCGAGCGGCGTTT 61.193 61.111 16.18 0.00 44.92 3.60
245 246 4.626081 ATGGGCGGTATGGCGAGC 62.626 66.667 0.00 0.00 46.04 5.03
246 247 2.357517 GATGGGCGGTATGGCGAG 60.358 66.667 0.00 0.00 46.04 5.03
247 248 4.293648 CGATGGGCGGTATGGCGA 62.294 66.667 0.00 0.00 46.04 5.54
248 249 3.589654 ATCGATGGGCGGTATGGCG 62.590 63.158 0.00 0.00 46.04 5.69
249 250 2.034879 CATCGATGGGCGGTATGGC 61.035 63.158 17.96 0.00 41.33 4.40
250 251 1.375908 CCATCGATGGGCGGTATGG 60.376 63.158 32.99 9.03 44.31 2.74
251 252 4.284123 CCATCGATGGGCGGTATG 57.716 61.111 32.99 8.01 44.31 2.39
280 281 4.154347 GAGGTCCCTGGCGAGCAG 62.154 72.222 14.08 0.00 32.57 4.24
295 296 4.154347 GTGAGGCTCGCCCAGGAG 62.154 72.222 17.19 0.00 36.58 3.69
296 297 4.704103 AGTGAGGCTCGCCCAGGA 62.704 66.667 23.63 0.00 36.58 3.86
297 298 4.463879 CAGTGAGGCTCGCCCAGG 62.464 72.222 23.63 8.17 36.58 4.45
317 318 3.402681 AGACCAGGTCCATGGCGG 61.403 66.667 16.72 7.32 44.80 6.13
318 319 2.124983 CAGACCAGGTCCATGGCG 60.125 66.667 16.72 0.00 44.80 5.69
319 320 1.222936 CTCAGACCAGGTCCATGGC 59.777 63.158 16.72 1.78 44.80 4.40
320 321 1.222936 GCTCAGACCAGGTCCATGG 59.777 63.158 16.72 4.97 46.47 3.66
321 322 0.177604 GAGCTCAGACCAGGTCCATG 59.822 60.000 16.72 9.21 35.25 3.66
322 323 1.326213 CGAGCTCAGACCAGGTCCAT 61.326 60.000 16.72 0.00 37.59 3.41
323 324 1.979155 CGAGCTCAGACCAGGTCCA 60.979 63.158 16.72 2.15 37.59 4.02
324 325 2.888863 CGAGCTCAGACCAGGTCC 59.111 66.667 16.72 0.36 37.59 4.46
325 326 2.183046 GCGAGCTCAGACCAGGTC 59.817 66.667 15.40 12.25 37.52 3.85
326 327 3.753434 CGCGAGCTCAGACCAGGT 61.753 66.667 15.40 0.00 0.00 4.00
343 344 3.936203 TGGTCACGAGGTGGTGGC 61.936 66.667 0.00 0.00 41.72 5.01
344 345 2.030562 GTGGTCACGAGGTGGTGG 59.969 66.667 0.00 0.00 38.46 4.61
345 346 1.594293 GTGTGGTCACGAGGTGGTG 60.594 63.158 0.00 0.00 39.29 4.17
346 347 2.803817 GGTGTGGTCACGAGGTGGT 61.804 63.158 0.00 0.00 44.68 4.16
347 348 2.030562 GGTGTGGTCACGAGGTGG 59.969 66.667 0.00 0.00 44.68 4.61
348 349 2.355837 CGGTGTGGTCACGAGGTG 60.356 66.667 0.00 0.00 44.68 4.00
349 350 4.295119 GCGGTGTGGTCACGAGGT 62.295 66.667 0.00 0.00 44.68 3.85
370 371 3.948719 TGTTGGTGGAGGACGGGC 61.949 66.667 0.00 0.00 0.00 6.13
371 372 2.032071 GTGTTGGTGGAGGACGGG 59.968 66.667 0.00 0.00 0.00 5.28
372 373 1.597027 GTGTGTTGGTGGAGGACGG 60.597 63.158 0.00 0.00 0.00 4.79
373 374 1.597027 GGTGTGTTGGTGGAGGACG 60.597 63.158 0.00 0.00 0.00 4.79
374 375 1.597027 CGGTGTGTTGGTGGAGGAC 60.597 63.158 0.00 0.00 0.00 3.85
375 376 2.825982 CGGTGTGTTGGTGGAGGA 59.174 61.111 0.00 0.00 0.00 3.71
376 377 2.978010 GCGGTGTGTTGGTGGAGG 60.978 66.667 0.00 0.00 0.00 4.30
377 378 2.111043 AGCGGTGTGTTGGTGGAG 59.889 61.111 0.00 0.00 0.00 3.86
378 379 2.203139 CAGCGGTGTGTTGGTGGA 60.203 61.111 6.41 0.00 0.00 4.02
379 380 3.964875 GCAGCGGTGTGTTGGTGG 61.965 66.667 17.07 0.00 34.31 4.61
380 381 3.964875 GGCAGCGGTGTGTTGGTG 61.965 66.667 17.07 0.00 36.70 4.17
383 384 3.964875 GTGGGCAGCGGTGTGTTG 61.965 66.667 17.07 0.00 0.00 3.33
411 412 3.883744 GAGGAGCGGTGTGGTGGTG 62.884 68.421 0.00 0.00 0.00 4.17
412 413 3.626924 GAGGAGCGGTGTGGTGGT 61.627 66.667 0.00 0.00 0.00 4.16
413 414 4.394712 GGAGGAGCGGTGTGGTGG 62.395 72.222 0.00 0.00 0.00 4.61
414 415 3.625897 TGGAGGAGCGGTGTGGTG 61.626 66.667 0.00 0.00 0.00 4.17
415 416 3.626924 GTGGAGGAGCGGTGTGGT 61.627 66.667 0.00 0.00 0.00 4.16
416 417 4.742201 CGTGGAGGAGCGGTGTGG 62.742 72.222 0.00 0.00 0.00 4.17
417 418 3.916392 GACGTGGAGGAGCGGTGTG 62.916 68.421 0.00 0.00 0.00 3.82
418 419 3.681835 GACGTGGAGGAGCGGTGT 61.682 66.667 0.00 0.00 0.00 4.16
419 420 4.436998 GGACGTGGAGGAGCGGTG 62.437 72.222 0.00 0.00 0.00 4.94
475 476 4.729918 GGTGGGCTGTCTGCAGGG 62.730 72.222 15.13 5.90 45.15 4.45
476 477 3.618780 GAGGTGGGCTGTCTGCAGG 62.619 68.421 15.13 0.00 45.15 4.85
477 478 2.046507 GAGGTGGGCTGTCTGCAG 60.047 66.667 7.63 7.63 45.15 4.41
478 479 2.527624 AGAGGTGGGCTGTCTGCA 60.528 61.111 3.96 0.00 45.15 4.41
479 480 2.046507 CAGAGGTGGGCTGTCTGC 60.047 66.667 0.00 0.00 41.94 4.26
480 481 2.046507 GCAGAGGTGGGCTGTCTG 60.047 66.667 0.00 0.00 40.66 3.51
481 482 3.699894 CGCAGAGGTGGGCTGTCT 61.700 66.667 0.00 0.00 35.81 3.41
488 489 3.997064 CTCCTTCGCGCAGAGGTGG 62.997 68.421 21.41 14.86 0.00 4.61
489 490 2.507992 CTCCTTCGCGCAGAGGTG 60.508 66.667 21.41 16.71 0.00 4.00
490 491 4.443266 GCTCCTTCGCGCAGAGGT 62.443 66.667 21.41 0.00 0.00 3.85
491 492 4.441695 TGCTCCTTCGCGCAGAGG 62.442 66.667 17.58 17.58 0.00 3.69
497 498 3.267860 GATGGCTGCTCCTTCGCG 61.268 66.667 0.00 0.00 35.26 5.87
498 499 2.899339 GGATGGCTGCTCCTTCGC 60.899 66.667 0.00 0.00 39.30 4.70
499 500 1.523258 CTGGATGGCTGCTCCTTCG 60.523 63.158 9.08 0.00 39.30 3.79
500 501 1.153005 CCTGGATGGCTGCTCCTTC 60.153 63.158 9.08 3.84 38.07 3.46
501 502 1.617536 TCCTGGATGGCTGCTCCTT 60.618 57.895 9.08 0.00 33.69 3.36
502 503 2.041762 TCCTGGATGGCTGCTCCT 59.958 61.111 9.08 0.00 33.69 3.69
503 504 2.191641 GTCCTGGATGGCTGCTCC 59.808 66.667 0.00 0.00 35.26 4.70
504 505 2.202987 CGTCCTGGATGGCTGCTC 60.203 66.667 8.09 0.00 35.26 4.26
505 506 4.479993 GCGTCCTGGATGGCTGCT 62.480 66.667 17.29 0.00 34.32 4.24
527 528 3.737172 CAAAAGTGGCGGGCGAGG 61.737 66.667 0.00 0.00 0.00 4.63
528 529 2.668212 TCAAAAGTGGCGGGCGAG 60.668 61.111 0.00 0.00 0.00 5.03
529 530 2.975799 GTCAAAAGTGGCGGGCGA 60.976 61.111 0.00 0.00 0.00 5.54
536 537 3.361977 CCCGGCCGTCAAAAGTGG 61.362 66.667 26.12 11.68 0.00 4.00
537 538 4.038080 GCCCGGCCGTCAAAAGTG 62.038 66.667 26.12 5.50 0.00 3.16
581 582 3.237741 GATCTGCCCCCTCCTCGG 61.238 72.222 0.00 0.00 0.00 4.63
582 583 2.123077 AGATCTGCCCCCTCCTCG 60.123 66.667 0.00 0.00 0.00 4.63
583 584 2.146061 CCAGATCTGCCCCCTCCTC 61.146 68.421 17.76 0.00 0.00 3.71
584 585 2.040043 CCAGATCTGCCCCCTCCT 60.040 66.667 17.76 0.00 0.00 3.69
585 586 3.883549 GCCAGATCTGCCCCCTCC 61.884 72.222 17.76 0.00 0.00 4.30
586 587 4.247380 CGCCAGATCTGCCCCCTC 62.247 72.222 17.76 0.98 0.00 4.30
592 593 2.588314 CAGAGGCGCCAGATCTGC 60.588 66.667 31.54 11.60 34.55 4.26
593 594 2.588314 GCAGAGGCGCCAGATCTG 60.588 66.667 30.19 30.19 42.70 2.90
603 604 2.512515 CAACCCTAGCGCAGAGGC 60.513 66.667 20.09 0.00 32.18 4.70
604 605 2.187946 CCAACCCTAGCGCAGAGG 59.812 66.667 18.89 18.89 0.00 3.69
605 606 2.187946 CCCAACCCTAGCGCAGAG 59.812 66.667 11.47 6.22 0.00 3.35
606 607 3.399181 CCCCAACCCTAGCGCAGA 61.399 66.667 11.47 0.00 0.00 4.26
607 608 4.489771 CCCCCAACCCTAGCGCAG 62.490 72.222 11.47 4.88 0.00 5.18
609 610 4.484872 GACCCCCAACCCTAGCGC 62.485 72.222 0.00 0.00 0.00 5.92
610 611 3.793888 GGACCCCCAACCCTAGCG 61.794 72.222 0.00 0.00 0.00 4.26
611 612 1.923006 GAAGGACCCCCAACCCTAGC 61.923 65.000 0.00 0.00 33.88 3.42
612 613 0.549169 TGAAGGACCCCCAACCCTAG 60.549 60.000 0.00 0.00 33.88 3.02
613 614 0.549169 CTGAAGGACCCCCAACCCTA 60.549 60.000 0.00 0.00 33.88 3.53
614 615 1.852626 CTGAAGGACCCCCAACCCT 60.853 63.158 0.00 0.00 33.88 4.34
615 616 1.850755 TCTGAAGGACCCCCAACCC 60.851 63.158 0.00 0.00 33.88 4.11
616 617 1.134438 ACTCTGAAGGACCCCCAACC 61.134 60.000 0.00 0.00 33.88 3.77
617 618 0.325272 GACTCTGAAGGACCCCCAAC 59.675 60.000 0.00 0.00 33.88 3.77
618 619 1.192146 CGACTCTGAAGGACCCCCAA 61.192 60.000 0.00 0.00 33.88 4.12
619 620 1.609501 CGACTCTGAAGGACCCCCA 60.610 63.158 0.00 0.00 33.88 4.96
620 621 3.020237 GCGACTCTGAAGGACCCCC 62.020 68.421 0.00 0.00 0.00 5.40
621 622 1.950973 GAGCGACTCTGAAGGACCCC 61.951 65.000 0.00 0.00 0.00 4.95
622 623 1.513622 GAGCGACTCTGAAGGACCC 59.486 63.158 0.00 0.00 0.00 4.46
623 624 1.137825 CGAGCGACTCTGAAGGACC 59.862 63.158 5.53 0.00 0.00 4.46
624 625 1.515304 GCGAGCGACTCTGAAGGAC 60.515 63.158 0.00 0.00 0.00 3.85
625 626 2.878429 GCGAGCGACTCTGAAGGA 59.122 61.111 0.00 0.00 0.00 3.36
626 627 2.578178 CGCGAGCGACTCTGAAGG 60.578 66.667 12.58 0.00 42.83 3.46
653 654 2.488087 AAAACGACTCGCTCCTCCCG 62.488 60.000 0.00 0.00 0.00 5.14
654 655 0.736672 GAAAACGACTCGCTCCTCCC 60.737 60.000 0.00 0.00 0.00 4.30
655 656 0.736672 GGAAAACGACTCGCTCCTCC 60.737 60.000 0.00 0.00 0.00 4.30
656 657 2.739407 GGAAAACGACTCGCTCCTC 58.261 57.895 0.00 0.00 0.00 3.71
657 658 4.990288 GGAAAACGACTCGCTCCT 57.010 55.556 0.00 0.00 0.00 3.69
667 668 2.480845 ACAGAACTTCCTCGGAAAACG 58.519 47.619 0.00 0.00 46.11 3.60
668 669 3.548214 GCAACAGAACTTCCTCGGAAAAC 60.548 47.826 0.00 0.00 33.34 2.43
669 670 2.616842 GCAACAGAACTTCCTCGGAAAA 59.383 45.455 0.00 0.00 33.34 2.29
670 671 2.158813 AGCAACAGAACTTCCTCGGAAA 60.159 45.455 0.00 0.00 33.34 3.13
671 672 1.416401 AGCAACAGAACTTCCTCGGAA 59.584 47.619 0.00 0.00 0.00 4.30
672 673 1.048601 AGCAACAGAACTTCCTCGGA 58.951 50.000 0.00 0.00 0.00 4.55
673 674 1.151668 CAGCAACAGAACTTCCTCGG 58.848 55.000 0.00 0.00 0.00 4.63
674 675 1.795286 GTCAGCAACAGAACTTCCTCG 59.205 52.381 0.00 0.00 0.00 4.63
675 676 2.545946 GTGTCAGCAACAGAACTTCCTC 59.454 50.000 0.00 0.00 38.97 3.71
676 677 2.171448 AGTGTCAGCAACAGAACTTCCT 59.829 45.455 0.00 0.00 38.97 3.36
677 678 2.565841 AGTGTCAGCAACAGAACTTCC 58.434 47.619 0.00 0.00 38.97 3.46
678 679 4.991056 TGATAGTGTCAGCAACAGAACTTC 59.009 41.667 0.00 0.00 38.97 3.01
679 680 4.960938 TGATAGTGTCAGCAACAGAACTT 58.039 39.130 0.00 0.00 38.97 2.66
680 681 4.607293 TGATAGTGTCAGCAACAGAACT 57.393 40.909 0.00 0.00 38.97 3.01
681 682 5.869753 AATGATAGTGTCAGCAACAGAAC 57.130 39.130 0.00 0.00 40.92 3.01
682 683 6.701340 ACTAATGATAGTGTCAGCAACAGAA 58.299 36.000 0.00 0.00 40.88 3.02
683 684 6.286240 ACTAATGATAGTGTCAGCAACAGA 57.714 37.500 0.00 0.00 40.88 3.41
684 685 8.654230 ATTACTAATGATAGTGTCAGCAACAG 57.346 34.615 0.00 0.00 42.37 3.16
685 686 8.478066 AGATTACTAATGATAGTGTCAGCAACA 58.522 33.333 0.00 0.00 42.37 3.33
686 687 8.759641 CAGATTACTAATGATAGTGTCAGCAAC 58.240 37.037 0.00 0.00 42.37 4.17
687 688 8.478066 ACAGATTACTAATGATAGTGTCAGCAA 58.522 33.333 0.00 0.00 42.37 3.91
688 689 8.011844 ACAGATTACTAATGATAGTGTCAGCA 57.988 34.615 0.00 0.00 42.37 4.41
689 690 8.879342 AACAGATTACTAATGATAGTGTCAGC 57.121 34.615 0.00 0.00 42.37 4.26
706 707 6.704493 GCTCACGGGTTATGAATAACAGATTA 59.296 38.462 13.66 0.00 43.33 1.75
708 709 5.057149 GCTCACGGGTTATGAATAACAGAT 58.943 41.667 13.66 0.00 43.33 2.90
710 711 3.245284 CGCTCACGGGTTATGAATAACAG 59.755 47.826 13.66 9.76 43.33 3.16
755 756 9.846248 ATGCAATACACAAAGATTTAGAAGAAC 57.154 29.630 0.00 0.00 0.00 3.01
784 785 2.422597 CCGTACAGGAAATGCTTGTGA 58.577 47.619 0.00 0.00 45.00 3.58
848 850 5.603596 TGCTGTCTCTTTCATTTTTGCATT 58.396 33.333 0.00 0.00 0.00 3.56
852 854 7.941795 ATTTCTGCTGTCTCTTTCATTTTTG 57.058 32.000 0.00 0.00 0.00 2.44
902 910 9.189156 TCGAATCTGGAGGATTTTCATTAAAAT 57.811 29.630 0.00 0.00 45.78 1.82
940 989 0.902984 AGGGTTTTCATTTCGGCCCC 60.903 55.000 0.00 0.00 36.86 5.80
969 1021 1.616374 GAAAAGTGGGGAAATTGCCGA 59.384 47.619 0.00 0.00 0.00 5.54
993 1045 0.597377 GGAAAACCTTGCGCTTGTGG 60.597 55.000 9.73 7.98 0.00 4.17
994 1046 0.597377 GGGAAAACCTTGCGCTTGTG 60.597 55.000 9.73 0.00 35.85 3.33
995 1047 1.739667 GGGAAAACCTTGCGCTTGT 59.260 52.632 9.73 0.00 35.85 3.16
996 1048 4.653555 GGGAAAACCTTGCGCTTG 57.346 55.556 9.73 0.33 35.85 4.01
1005 1057 1.572689 GGAGGGAGGGAGGGAAAACC 61.573 65.000 0.00 0.00 40.67 3.27
1006 1058 1.911702 CGGAGGGAGGGAGGGAAAAC 61.912 65.000 0.00 0.00 0.00 2.43
1007 1059 1.615424 CGGAGGGAGGGAGGGAAAA 60.615 63.158 0.00 0.00 0.00 2.29
1008 1060 2.040606 CGGAGGGAGGGAGGGAAA 59.959 66.667 0.00 0.00 0.00 3.13
1009 1061 4.798682 GCGGAGGGAGGGAGGGAA 62.799 72.222 0.00 0.00 0.00 3.97
1012 1064 3.984186 TTGAGCGGAGGGAGGGAGG 62.984 68.421 0.00 0.00 0.00 4.30
1013 1065 2.364317 TTGAGCGGAGGGAGGGAG 60.364 66.667 0.00 0.00 0.00 4.30
1014 1066 2.683933 GTTGAGCGGAGGGAGGGA 60.684 66.667 0.00 0.00 0.00 4.20
1078 1474 1.065109 CGGGATGTCGTATGCGTCA 59.935 57.895 5.57 5.57 40.03 4.35
1082 1478 1.594293 CCCACGGGATGTCGTATGC 60.594 63.158 0.00 0.00 41.86 3.14
1084 1480 1.682451 CCACCCACGGGATGTCGTAT 61.682 60.000 9.72 0.00 41.86 3.06
1273 1669 0.105246 AGGCATGGGAGTAGAGGAGG 60.105 60.000 0.00 0.00 0.00 4.30
1381 1778 3.832171 GCGTTGAGCTCGAGCACG 61.832 66.667 36.87 34.31 45.16 5.34
1466 1863 2.408022 GGATCGACCGTCAGACCG 59.592 66.667 0.00 0.00 0.00 4.79
1487 1884 0.906775 CATCAAGCCCCCTGCAAAAT 59.093 50.000 0.00 0.00 44.83 1.82
1559 1956 1.080093 GACGATCTTGTGCCGTCCA 60.080 57.895 0.00 0.00 44.67 4.02
1621 2018 1.016130 CGACATCACACAGGCCTGAC 61.016 60.000 39.19 16.24 0.00 3.51
1756 2162 8.982723 ACCTCTATCTAGTTCATTGTAATGTGT 58.017 33.333 4.67 0.00 37.65 3.72
1794 2200 5.688766 GCTTTCCCCTGCTTATCTTCATAGT 60.689 44.000 0.00 0.00 0.00 2.12
1802 2208 2.172717 TGTAGGCTTTCCCCTGCTTATC 59.827 50.000 0.00 0.00 38.30 1.75
1840 2252 7.440523 AGTTGTGGTTCTGAGTAATTCAATC 57.559 36.000 0.00 0.00 34.81 2.67
1841 2253 7.502226 TGAAGTTGTGGTTCTGAGTAATTCAAT 59.498 33.333 0.00 0.00 34.81 2.57
1842 2254 6.826231 TGAAGTTGTGGTTCTGAGTAATTCAA 59.174 34.615 0.00 0.00 34.81 2.69
1929 2341 9.883142 AGGTGTGAAAAATTGTCAAAAATTCTA 57.117 25.926 0.00 0.00 0.00 2.10
1934 2346 8.840321 TCAAAAGGTGTGAAAAATTGTCAAAAA 58.160 25.926 0.00 0.00 0.00 1.94
1939 2351 7.595311 AACTCAAAAGGTGTGAAAAATTGTC 57.405 32.000 0.00 0.00 0.00 3.18
1980 2396 7.654116 GGGTGAATAGTTAGAGCAAGAGTTATC 59.346 40.741 0.00 0.00 0.00 1.75
1982 2398 6.439375 TGGGTGAATAGTTAGAGCAAGAGTTA 59.561 38.462 0.00 0.00 0.00 2.24
1989 2405 2.837591 TGCTGGGTGAATAGTTAGAGCA 59.162 45.455 0.00 0.00 32.96 4.26
2005 2421 0.038744 ATGAGAGGTTTGGGTGCTGG 59.961 55.000 0.00 0.00 0.00 4.85
2070 2487 4.706842 ATTGACAGGGCCGTATCTATTT 57.293 40.909 5.17 0.00 0.00 1.40
2075 2492 1.947456 GGAAATTGACAGGGCCGTATC 59.053 52.381 0.00 0.00 0.00 2.24
2077 2494 0.034863 GGGAAATTGACAGGGCCGTA 60.035 55.000 0.00 0.00 0.00 4.02
2093 2510 5.515106 CCCATTTGTATTCTGTTTAGGGGA 58.485 41.667 0.00 0.00 32.36 4.81
2147 2564 1.196354 GCGATATTCATGGCAGAGTGC 59.804 52.381 0.00 0.00 44.08 4.40
2273 2690 7.668052 AGGAAGTAGCTACCTATATCACTGAAG 59.332 40.741 20.31 0.00 31.78 3.02
2296 2713 6.040166 ACGCTCTTATATTTCTTTACGGAGGA 59.960 38.462 0.00 0.00 0.00 3.71
2348 2765 9.495382 ACTCCCTCTGTAAAGAAATATAAGAGT 57.505 33.333 0.00 0.00 0.00 3.24
2396 2813 0.319555 GCACGTAGCAAGTGTGAGGA 60.320 55.000 5.30 0.00 44.79 3.71
2436 2853 3.144506 CATGGTTCTTCTCAGTGCTTGT 58.855 45.455 0.00 0.00 0.00 3.16
2659 3076 1.201429 AGGCAGTACCCTCCAACAGG 61.201 60.000 0.00 0.00 43.01 4.00
2676 3093 9.436957 TTTATCTTCTAGCTAAGACAACAAAGG 57.563 33.333 0.97 0.00 38.28 3.11
2711 3128 4.188462 TGGCGGTATGAATGAACAGTTAG 58.812 43.478 0.00 0.00 0.00 2.34
2773 3190 7.095102 GGTTTCAGCAGTTTTCATGCATAAAAT 60.095 33.333 0.00 0.00 46.31 1.82
2786 3203 4.164843 TGAGTAAGGGTTTCAGCAGTTT 57.835 40.909 0.00 0.00 0.00 2.66
2842 3259 6.655078 AGTGACAAAGCACCTTAAATTGAT 57.345 33.333 0.00 0.00 39.59 2.57
3080 3501 2.564947 GGAACAGGACTGTCATCTGAGT 59.435 50.000 17.34 7.53 44.13 3.41
3081 3502 2.416566 CGGAACAGGACTGTCATCTGAG 60.417 54.545 17.34 0.00 44.13 3.35
3146 3567 6.398918 TCTAATACAGTTGCAGTTCTTCCTC 58.601 40.000 0.00 0.00 0.00 3.71
3150 3571 9.502091 TGTAATTCTAATACAGTTGCAGTTCTT 57.498 29.630 0.00 0.00 0.00 2.52
3256 3677 8.548880 ACCCTAAATTACAGCTACTTATCAGA 57.451 34.615 0.00 0.00 0.00 3.27
3430 3851 6.533730 TGCCATTACTTGTGATATTAGGGAG 58.466 40.000 0.00 0.00 0.00 4.30
3490 3911 7.013369 GGTTCAGAAAATAACAACCTCTTCAGT 59.987 37.037 0.00 0.00 34.74 3.41
3534 3955 2.094182 ACTCCACATGTACTAGTTGCCG 60.094 50.000 0.00 0.00 0.00 5.69
3545 3966 4.640771 AAGTAACATCCACTCCACATGT 57.359 40.909 0.00 0.00 31.90 3.21
3627 4049 2.093447 AGGCCAAACTGACTTATCCTCG 60.093 50.000 5.01 0.00 0.00 4.63
3678 4103 3.686726 CCAGTTGAGCCTTGAAGTACATC 59.313 47.826 0.00 0.00 0.00 3.06
3695 4120 2.366916 CACCTCTTGACTCAGACCAGTT 59.633 50.000 0.00 0.00 0.00 3.16
3743 4174 6.419484 TTTCTAGATCCAACAACTCAGTCA 57.581 37.500 0.00 0.00 0.00 3.41
3767 4198 2.970640 GTGGGACGGAGGGAGTAATAAT 59.029 50.000 0.00 0.00 0.00 1.28
3804 4235 4.844349 AAATACTCCCTCTTAGCTTGCA 57.156 40.909 0.00 0.00 0.00 4.08
3810 4241 7.093771 ACCAAATTGCAAAATACTCCCTCTTAG 60.094 37.037 1.71 0.00 0.00 2.18
3885 4316 1.408702 GGAAAGTTGCCTGTTTGCAGA 59.591 47.619 0.00 0.00 45.28 4.26
3903 4334 4.142271 ACTGAAATTCGCAAAACAACTGGA 60.142 37.500 0.00 0.00 0.00 3.86
3904 4335 4.111916 ACTGAAATTCGCAAAACAACTGG 58.888 39.130 0.00 0.00 0.00 4.00
3905 4336 5.062058 ACAACTGAAATTCGCAAAACAACTG 59.938 36.000 0.00 0.00 0.00 3.16
3906 4337 5.167845 ACAACTGAAATTCGCAAAACAACT 58.832 33.333 0.00 0.00 0.00 3.16
3907 4338 5.448926 ACAACTGAAATTCGCAAAACAAC 57.551 34.783 0.00 0.00 0.00 3.32
3908 4339 6.473397 AAACAACTGAAATTCGCAAAACAA 57.527 29.167 0.00 0.00 0.00 2.83
3909 4340 6.473397 AAAACAACTGAAATTCGCAAAACA 57.527 29.167 0.00 0.00 0.00 2.83
3910 4341 9.484326 AATAAAAACAACTGAAATTCGCAAAAC 57.516 25.926 0.00 0.00 0.00 2.43
3944 4393 7.156876 TGATCAAATGGATTTCAACACTACC 57.843 36.000 0.00 0.00 36.00 3.18
4021 4470 2.354403 GGTGTTAGGACTGCACCGTAAT 60.354 50.000 10.55 0.00 42.43 1.89
4025 4474 4.278956 GGTGTTAGGACTGCACCG 57.721 61.111 10.55 0.00 42.43 4.94
4030 4479 5.888982 ACATAATAGGGGTGTTAGGACTG 57.111 43.478 0.00 0.00 0.00 3.51
4031 4480 6.099845 CAGAACATAATAGGGGTGTTAGGACT 59.900 42.308 0.00 0.00 36.30 3.85
4032 4481 6.126854 ACAGAACATAATAGGGGTGTTAGGAC 60.127 42.308 0.00 0.00 36.30 3.85
4048 4497 9.661563 CACCCTATAACTAACAAACAGAACATA 57.338 33.333 0.00 0.00 0.00 2.29
4129 4578 5.921962 AAATTATGGCTTCAAGACCTTCC 57.078 39.130 0.00 0.00 0.00 3.46
4147 4596 6.209192 TCATGTCACCATCAGCAGTAAAAATT 59.791 34.615 0.00 0.00 0.00 1.82
4213 4662 8.918961 ACACATTTTCTTGATTAACAAAACGA 57.081 26.923 0.00 0.00 38.08 3.85
4262 4711 3.120121 GCAGAATTCACATGACGCAAAAC 59.880 43.478 8.44 0.00 0.00 2.43
4269 4718 7.081526 AGAAGTATTGCAGAATTCACATGAC 57.918 36.000 8.44 6.68 0.00 3.06
4274 4723 8.976986 AATTGAAGAAGTATTGCAGAATTCAC 57.023 30.769 8.44 0.00 0.00 3.18
4330 4779 1.075212 TGCAAGGGATGTGGTTGATCA 59.925 47.619 0.00 0.00 0.00 2.92
4444 4893 4.363999 GGAAGAGAGTGGTGATTATGTCG 58.636 47.826 0.00 0.00 0.00 4.35
4456 4905 3.057245 TCTTGATGACACGGAAGAGAGTG 60.057 47.826 0.00 0.00 43.46 3.51
4548 4997 6.857437 TGACAGGATAAATCAGAAGAGACA 57.143 37.500 0.00 0.00 0.00 3.41
4567 5016 6.757897 AGAAACATGAAAGTTGAGTTGACA 57.242 33.333 0.00 0.00 0.00 3.58
4575 5024 2.401720 GCGCGAAGAAACATGAAAGTTG 59.598 45.455 12.10 0.00 0.00 3.16
4578 5027 2.236690 CTGCGCGAAGAAACATGAAAG 58.763 47.619 9.01 0.00 0.00 2.62
4589 5038 2.290122 ATCCTGTCTCCTGCGCGAAG 62.290 60.000 12.10 9.54 0.00 3.79
4595 5048 1.986575 GCGCAAATCCTGTCTCCTGC 61.987 60.000 0.30 0.00 0.00 4.85
4601 5054 0.804364 TCATGTGCGCAAATCCTGTC 59.196 50.000 14.00 0.00 0.00 3.51
4604 5057 0.035152 TCCTCATGTGCGCAAATCCT 60.035 50.000 14.00 0.00 0.00 3.24
4688 5141 1.662026 CGTTACGCTTTGGCTGTTTCC 60.662 52.381 0.00 0.00 36.09 3.13
4745 5198 4.148348 GTCGTGATAAACAGGATACGCATC 59.852 45.833 0.00 0.00 43.61 3.91
4750 5203 5.892568 ACAGAGTCGTGATAAACAGGATAC 58.107 41.667 0.00 0.00 43.61 2.24
4753 5206 4.079970 AGACAGAGTCGTGATAAACAGGA 58.920 43.478 0.00 0.00 40.41 3.86
4764 5218 3.687125 TGAGATACCAAGACAGAGTCGT 58.313 45.455 0.00 0.00 37.67 4.34
4766 5220 4.461081 ACACTGAGATACCAAGACAGAGTC 59.539 45.833 0.00 0.00 29.63 3.36
4775 5229 7.956328 ACTATCTTACACACTGAGATACCAA 57.044 36.000 0.00 0.00 32.68 3.67
4825 5279 3.034721 ACATCTCCGACGCTAAACAAA 57.965 42.857 0.00 0.00 0.00 2.83
4835 5289 2.688958 AGGCTACAACTACATCTCCGAC 59.311 50.000 0.00 0.00 0.00 4.79
4919 5373 0.443869 AAATACAGCAGCGCGTGAAG 59.556 50.000 8.43 3.90 0.00 3.02
5089 5544 4.452455 AGTTGGACAGTAAAATTCAGAGCG 59.548 41.667 0.00 0.00 0.00 5.03
5091 5546 6.708054 AGACAGTTGGACAGTAAAATTCAGAG 59.292 38.462 0.00 0.00 0.00 3.35
5104 5559 5.545063 TCATAAGTTCAGACAGTTGGACA 57.455 39.130 0.00 0.00 0.00 4.02
5129 5585 5.362430 ACCATTTTGGCTCTTTGTAAACTCA 59.638 36.000 0.00 0.00 42.67 3.41
5138 5594 6.153510 GGATTAGAAGACCATTTTGGCTCTTT 59.846 38.462 10.58 6.16 42.67 2.52
5139 5595 5.654209 GGATTAGAAGACCATTTTGGCTCTT 59.346 40.000 9.59 9.59 42.67 2.85
5140 5596 5.044550 AGGATTAGAAGACCATTTTGGCTCT 60.045 40.000 0.00 0.00 42.67 4.09
5141 5597 5.196695 AGGATTAGAAGACCATTTTGGCTC 58.803 41.667 0.00 0.00 42.67 4.70
5142 5598 5.198602 AGGATTAGAAGACCATTTTGGCT 57.801 39.130 0.00 0.00 42.67 4.75
5143 5599 5.921962 AAGGATTAGAAGACCATTTTGGC 57.078 39.130 0.00 0.00 42.67 4.52
5165 5621 3.949754 CCATGGAAAGAGCATTCAAGCTA 59.050 43.478 5.56 0.00 46.75 3.32
5170 5626 5.378230 ACTATCCATGGAAAGAGCATTCA 57.622 39.130 20.67 0.00 0.00 2.57
5171 5627 7.807977 TTTACTATCCATGGAAAGAGCATTC 57.192 36.000 20.67 0.00 0.00 2.67
5237 5695 3.719924 ACCATGCAATGTTTGTTGTGAG 58.280 40.909 0.00 0.00 44.81 3.51
5239 5697 4.879104 AAACCATGCAATGTTTGTTGTG 57.121 36.364 14.10 0.00 44.81 3.33
5291 5753 4.657814 ATTACCAGACCTCCACAAATGT 57.342 40.909 0.00 0.00 0.00 2.71
5315 5777 8.394121 GCATTTTGGAGTGTTGATTTTGTAAAA 58.606 29.630 0.00 0.00 0.00 1.52
5318 5780 6.815089 AGCATTTTGGAGTGTTGATTTTGTA 58.185 32.000 0.00 0.00 0.00 2.41
5441 5903 5.885881 ACTTTTCGCAACAAACATTACTGA 58.114 33.333 0.00 0.00 0.00 3.41
5442 5904 5.971202 AGACTTTTCGCAACAAACATTACTG 59.029 36.000 0.00 0.00 0.00 2.74
5443 5905 6.131544 AGACTTTTCGCAACAAACATTACT 57.868 33.333 0.00 0.00 0.00 2.24
5444 5906 6.470877 TCAAGACTTTTCGCAACAAACATTAC 59.529 34.615 0.00 0.00 0.00 1.89
5445 5907 6.556212 TCAAGACTTTTCGCAACAAACATTA 58.444 32.000 0.00 0.00 0.00 1.90
5446 5908 5.406649 TCAAGACTTTTCGCAACAAACATT 58.593 33.333 0.00 0.00 0.00 2.71
5447 5909 4.992688 TCAAGACTTTTCGCAACAAACAT 58.007 34.783 0.00 0.00 0.00 2.71
5448 5910 4.155099 TCTCAAGACTTTTCGCAACAAACA 59.845 37.500 0.00 0.00 0.00 2.83
5449 5911 4.658071 TCTCAAGACTTTTCGCAACAAAC 58.342 39.130 0.00 0.00 0.00 2.93
5450 5912 4.955925 TCTCAAGACTTTTCGCAACAAA 57.044 36.364 0.00 0.00 0.00 2.83
5451 5913 6.801539 ATATCTCAAGACTTTTCGCAACAA 57.198 33.333 0.00 0.00 0.00 2.83
5452 5914 6.801539 AATATCTCAAGACTTTTCGCAACA 57.198 33.333 0.00 0.00 0.00 3.33
5453 5915 8.507470 AAAAATATCTCAAGACTTTTCGCAAC 57.493 30.769 0.00 0.00 0.00 4.17
5476 5938 6.839124 AGGCATCATCATGAACAGTAAAAA 57.161 33.333 0.00 0.00 30.57 1.94
5477 5939 6.839124 AAGGCATCATCATGAACAGTAAAA 57.161 33.333 0.00 0.00 30.57 1.52
5478 5940 6.839124 AAAGGCATCATCATGAACAGTAAA 57.161 33.333 0.00 0.00 30.57 2.01
5479 5941 6.433716 TCAAAAGGCATCATCATGAACAGTAA 59.566 34.615 0.00 0.00 30.57 2.24
5480 5942 5.945191 TCAAAAGGCATCATCATGAACAGTA 59.055 36.000 0.00 0.00 30.57 2.74
5481 5943 4.768448 TCAAAAGGCATCATCATGAACAGT 59.232 37.500 0.00 0.00 30.57 3.55
5482 5944 5.319140 TCAAAAGGCATCATCATGAACAG 57.681 39.130 0.00 0.00 30.57 3.16
5483 5945 4.381185 GCTCAAAAGGCATCATCATGAACA 60.381 41.667 0.00 0.00 30.57 3.18
5484 5946 4.110482 GCTCAAAAGGCATCATCATGAAC 58.890 43.478 0.00 0.00 30.57 3.18
5485 5947 4.021229 AGCTCAAAAGGCATCATCATGAA 58.979 39.130 0.00 0.00 30.57 2.57
5486 5948 3.628008 AGCTCAAAAGGCATCATCATGA 58.372 40.909 0.00 0.00 30.57 3.07
5487 5949 5.067413 ACTTAGCTCAAAAGGCATCATCATG 59.933 40.000 0.00 0.00 0.00 3.07
5488 5950 5.067413 CACTTAGCTCAAAAGGCATCATCAT 59.933 40.000 0.00 0.00 0.00 2.45
5489 5951 4.397103 CACTTAGCTCAAAAGGCATCATCA 59.603 41.667 0.00 0.00 0.00 3.07
5490 5952 4.397417 ACACTTAGCTCAAAAGGCATCATC 59.603 41.667 0.00 0.00 0.00 2.92
5491 5953 4.338879 ACACTTAGCTCAAAAGGCATCAT 58.661 39.130 0.00 0.00 0.00 2.45
5492 5954 3.754965 ACACTTAGCTCAAAAGGCATCA 58.245 40.909 0.00 0.00 0.00 3.07
5493 5955 5.178797 TCTACACTTAGCTCAAAAGGCATC 58.821 41.667 0.00 0.00 0.00 3.91
5494 5956 5.165961 TCTACACTTAGCTCAAAAGGCAT 57.834 39.130 0.00 0.00 0.00 4.40
5495 5957 4.617253 TCTACACTTAGCTCAAAAGGCA 57.383 40.909 0.00 0.00 0.00 4.75
5496 5958 5.470437 AGTTTCTACACTTAGCTCAAAAGGC 59.530 40.000 0.00 0.00 0.00 4.35
5497 5959 6.147985 GGAGTTTCTACACTTAGCTCAAAAGG 59.852 42.308 0.00 0.00 0.00 3.11
5498 5960 6.706270 TGGAGTTTCTACACTTAGCTCAAAAG 59.294 38.462 0.00 0.00 0.00 2.27
5499 5961 6.588204 TGGAGTTTCTACACTTAGCTCAAAA 58.412 36.000 0.00 0.00 0.00 2.44
5500 5962 6.169557 TGGAGTTTCTACACTTAGCTCAAA 57.830 37.500 0.00 0.00 0.00 2.69
5501 5963 5.801531 TGGAGTTTCTACACTTAGCTCAA 57.198 39.130 0.00 0.00 0.00 3.02
5502 5964 5.246203 ACATGGAGTTTCTACACTTAGCTCA 59.754 40.000 0.00 0.00 0.00 4.26
5503 5965 5.725362 ACATGGAGTTTCTACACTTAGCTC 58.275 41.667 0.00 0.00 0.00 4.09
5504 5966 5.337652 GGACATGGAGTTTCTACACTTAGCT 60.338 44.000 0.00 0.00 0.00 3.32
5505 5967 4.870991 GGACATGGAGTTTCTACACTTAGC 59.129 45.833 0.00 0.00 0.00 3.09
5506 5968 5.046591 TGGGACATGGAGTTTCTACACTTAG 60.047 44.000 0.00 0.00 0.00 2.18
5579 6124 4.927267 ATGGAGGGAGTAACATTCAACA 57.073 40.909 0.00 0.00 0.00 3.33
5597 6142 8.606040 AAACCATGACACTTATTTTGAAATGG 57.394 30.769 0.00 0.00 36.93 3.16
5602 6147 9.959749 GAACTAAAACCATGACACTTATTTTGA 57.040 29.630 0.00 0.00 0.00 2.69
5609 6154 7.122055 TCAGTTTGAACTAAAACCATGACACTT 59.878 33.333 0.00 0.00 40.26 3.16
5626 6171 8.956426 ACTGTCAAGATTTTAGTTCAGTTTGAA 58.044 29.630 0.00 0.00 33.32 2.69
5627 6172 8.506168 ACTGTCAAGATTTTAGTTCAGTTTGA 57.494 30.769 0.00 0.00 32.15 2.69
5643 6188 6.017440 CCTCCGTTTCAAAATAACTGTCAAGA 60.017 38.462 0.00 0.00 0.00 3.02
5645 6190 5.009210 CCCTCCGTTTCAAAATAACTGTCAA 59.991 40.000 0.00 0.00 0.00 3.18
5651 6196 4.841443 ACACCCTCCGTTTCAAAATAAC 57.159 40.909 0.00 0.00 0.00 1.89
5710 6262 1.035923 ACCGAGCGATCAGTCATCAT 58.964 50.000 0.00 0.00 0.00 2.45
5711 6263 0.101219 CACCGAGCGATCAGTCATCA 59.899 55.000 0.00 0.00 0.00 3.07
5728 6282 2.434702 AGGTTCCGAGAATGGTATCCAC 59.565 50.000 0.00 0.00 35.80 4.02
5742 6296 1.153349 GAGGCAGCCTTAGGTTCCG 60.153 63.158 17.46 0.00 31.76 4.30
5776 6330 0.737019 GCAATGTTCCGTTGGCCATG 60.737 55.000 6.09 1.49 31.70 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.