Multiple sequence alignment - TraesCS2B01G418600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G418600 | chr2B | 100.000 | 4388 | 0 | 0 | 3189 | 7576 | 599811043 | 599815430 | 0.000000e+00 | 8104.0 |
1 | TraesCS2B01G418600 | chr2B | 100.000 | 2849 | 0 | 0 | 1 | 2849 | 599807855 | 599810703 | 0.000000e+00 | 5262.0 |
2 | TraesCS2B01G418600 | chr2B | 94.430 | 754 | 36 | 5 | 2099 | 2849 | 755621437 | 755620687 | 0.000000e+00 | 1155.0 |
3 | TraesCS2B01G418600 | chr2B | 89.704 | 641 | 58 | 6 | 4466 | 5101 | 27955289 | 27954652 | 0.000000e+00 | 811.0 |
4 | TraesCS2B01G418600 | chr2B | 94.378 | 249 | 13 | 1 | 3189 | 3436 | 795477595 | 795477843 | 1.540000e-101 | 381.0 |
5 | TraesCS2B01G418600 | chr2B | 96.000 | 50 | 2 | 0 | 1753 | 1802 | 599809574 | 599809623 | 1.750000e-11 | 82.4 |
6 | TraesCS2B01G418600 | chr2B | 96.000 | 50 | 2 | 0 | 1720 | 1769 | 599809607 | 599809656 | 1.750000e-11 | 82.4 |
7 | TraesCS2B01G418600 | chr2A | 93.238 | 1671 | 66 | 14 | 5160 | 6830 | 653859849 | 653861472 | 0.000000e+00 | 2416.0 |
8 | TraesCS2B01G418600 | chr2A | 94.112 | 985 | 27 | 14 | 793 | 1774 | 653857813 | 653858769 | 0.000000e+00 | 1469.0 |
9 | TraesCS2B01G418600 | chr2A | 91.196 | 886 | 57 | 9 | 3430 | 4307 | 653858973 | 653859845 | 0.000000e+00 | 1184.0 |
10 | TraesCS2B01G418600 | chr2A | 86.028 | 866 | 102 | 15 | 3553 | 4410 | 603860344 | 603861198 | 0.000000e+00 | 911.0 |
11 | TraesCS2B01G418600 | chr2A | 89.792 | 480 | 27 | 2 | 1 | 479 | 653850780 | 653851238 | 5.060000e-166 | 595.0 |
12 | TraesCS2B01G418600 | chr2A | 96.899 | 258 | 7 | 1 | 1753 | 2009 | 653858713 | 653858970 | 1.510000e-116 | 431.0 |
13 | TraesCS2B01G418600 | chr2A | 93.711 | 159 | 9 | 1 | 7048 | 7206 | 653863590 | 653863747 | 3.530000e-58 | 237.0 |
14 | TraesCS2B01G418600 | chr2A | 97.115 | 104 | 3 | 0 | 623 | 726 | 653857703 | 653857806 | 7.810000e-40 | 176.0 |
15 | TraesCS2B01G418600 | chr3A | 92.109 | 1470 | 100 | 10 | 3645 | 5100 | 100435430 | 100436897 | 0.000000e+00 | 2058.0 |
16 | TraesCS2B01G418600 | chr3A | 89.796 | 147 | 13 | 2 | 3425 | 3571 | 100435288 | 100435432 | 3.610000e-43 | 187.0 |
17 | TraesCS2B01G418600 | chr2D | 94.041 | 1376 | 40 | 10 | 414 | 1774 | 510208514 | 510209862 | 0.000000e+00 | 2049.0 |
18 | TraesCS2B01G418600 | chr2D | 95.215 | 1024 | 35 | 2 | 5160 | 6170 | 510210946 | 510211968 | 0.000000e+00 | 1607.0 |
19 | TraesCS2B01G418600 | chr2D | 93.552 | 1008 | 43 | 11 | 6200 | 7205 | 510211968 | 510212955 | 0.000000e+00 | 1482.0 |
20 | TraesCS2B01G418600 | chr2D | 92.752 | 814 | 55 | 3 | 4289 | 5101 | 510205772 | 510204962 | 0.000000e+00 | 1173.0 |
21 | TraesCS2B01G418600 | chr2D | 89.444 | 900 | 49 | 19 | 3419 | 4307 | 510210076 | 510210940 | 0.000000e+00 | 1094.0 |
22 | TraesCS2B01G418600 | chr2D | 93.425 | 654 | 36 | 5 | 3680 | 4327 | 510206421 | 510205769 | 0.000000e+00 | 963.0 |
23 | TraesCS2B01G418600 | chr2D | 90.925 | 562 | 49 | 2 | 4542 | 5101 | 532168337 | 532168898 | 0.000000e+00 | 754.0 |
24 | TraesCS2B01G418600 | chr2D | 97.388 | 268 | 7 | 0 | 1753 | 2020 | 510209807 | 510210074 | 2.490000e-124 | 457.0 |
25 | TraesCS2B01G418600 | chr2D | 95.455 | 242 | 11 | 0 | 3189 | 3430 | 80625651 | 80625410 | 3.320000e-103 | 387.0 |
26 | TraesCS2B01G418600 | chr2D | 78.526 | 475 | 91 | 9 | 4618 | 5086 | 99722106 | 99722575 | 1.240000e-77 | 302.0 |
27 | TraesCS2B01G418600 | chr2D | 92.973 | 185 | 13 | 0 | 4398 | 4582 | 532168164 | 532168348 | 3.480000e-68 | 270.0 |
28 | TraesCS2B01G418600 | chr2D | 97.368 | 38 | 1 | 0 | 5161 | 5198 | 607135061 | 607135098 | 1.760000e-06 | 65.8 |
29 | TraesCS2B01G418600 | chr2D | 94.444 | 36 | 1 | 1 | 6894 | 6928 | 222761134 | 222761169 | 4.000000e-03 | 54.7 |
30 | TraesCS2B01G418600 | chr1B | 88.016 | 1527 | 145 | 26 | 3592 | 5101 | 62534521 | 62533016 | 0.000000e+00 | 1772.0 |
31 | TraesCS2B01G418600 | chr1B | 95.368 | 734 | 31 | 3 | 2117 | 2847 | 575894186 | 575893453 | 0.000000e+00 | 1164.0 |
32 | TraesCS2B01G418600 | chr1B | 95.122 | 738 | 33 | 3 | 2114 | 2849 | 120063132 | 120062396 | 0.000000e+00 | 1160.0 |
33 | TraesCS2B01G418600 | chr7B | 85.589 | 1707 | 190 | 34 | 3425 | 5101 | 702192805 | 702194485 | 0.000000e+00 | 1738.0 |
34 | TraesCS2B01G418600 | chr7B | 95.374 | 735 | 30 | 4 | 2117 | 2849 | 8924701 | 8923969 | 0.000000e+00 | 1166.0 |
35 | TraesCS2B01G418600 | chr7B | 93.353 | 346 | 11 | 3 | 7232 | 7576 | 447748424 | 447748758 | 1.130000e-137 | 501.0 |
36 | TraesCS2B01G418600 | chr7B | 97.872 | 235 | 5 | 0 | 3189 | 3423 | 238670499 | 238670265 | 2.550000e-109 | 407.0 |
37 | TraesCS2B01G418600 | chr7B | 88.855 | 332 | 34 | 1 | 1329 | 1657 | 612403854 | 612404185 | 9.150000e-109 | 405.0 |
38 | TraesCS2B01G418600 | chr7B | 87.834 | 337 | 34 | 2 | 7240 | 7576 | 133788226 | 133787897 | 9.220000e-104 | 388.0 |
39 | TraesCS2B01G418600 | chr7B | 94.332 | 247 | 14 | 0 | 3189 | 3435 | 373777441 | 373777195 | 5.550000e-101 | 379.0 |
40 | TraesCS2B01G418600 | chr7B | 83.077 | 325 | 41 | 11 | 6252 | 6571 | 612405574 | 612405889 | 4.480000e-72 | 283.0 |
41 | TraesCS2B01G418600 | chr7B | 89.308 | 159 | 17 | 0 | 1827 | 1985 | 612404270 | 612404428 | 4.640000e-47 | 200.0 |
42 | TraesCS2B01G418600 | chr7B | 90.000 | 80 | 8 | 0 | 5885 | 5964 | 612405238 | 612405317 | 3.740000e-18 | 104.0 |
43 | TraesCS2B01G418600 | chr7B | 97.500 | 40 | 1 | 0 | 5161 | 5200 | 747608691 | 747608652 | 1.360000e-07 | 69.4 |
44 | TraesCS2B01G418600 | chr3D | 92.433 | 1163 | 66 | 13 | 3573 | 4724 | 84121328 | 84122479 | 0.000000e+00 | 1640.0 |
45 | TraesCS2B01G418600 | chr3D | 94.652 | 748 | 35 | 5 | 2105 | 2849 | 569062902 | 569062157 | 0.000000e+00 | 1155.0 |
46 | TraesCS2B01G418600 | chr3D | 93.194 | 382 | 25 | 1 | 4720 | 5101 | 84127939 | 84128319 | 1.850000e-155 | 560.0 |
47 | TraesCS2B01G418600 | chr3D | 94.355 | 248 | 12 | 2 | 3189 | 3435 | 450237346 | 450237100 | 5.550000e-101 | 379.0 |
48 | TraesCS2B01G418600 | chr5A | 97.411 | 734 | 18 | 1 | 2117 | 2849 | 10937323 | 10938056 | 0.000000e+00 | 1249.0 |
49 | TraesCS2B01G418600 | chr5A | 98.312 | 237 | 4 | 0 | 3189 | 3425 | 10938111 | 10938347 | 4.230000e-112 | 416.0 |
50 | TraesCS2B01G418600 | chr5A | 88.323 | 334 | 39 | 0 | 1333 | 1666 | 708124369 | 708124036 | 1.180000e-107 | 401.0 |
51 | TraesCS2B01G418600 | chr5A | 89.200 | 250 | 25 | 2 | 1329 | 1577 | 708078990 | 708078742 | 2.050000e-80 | 311.0 |
52 | TraesCS2B01G418600 | chr5A | 76.761 | 568 | 94 | 31 | 5839 | 6393 | 708120869 | 708120327 | 4.480000e-72 | 283.0 |
53 | TraesCS2B01G418600 | chr5A | 76.025 | 488 | 99 | 15 | 4618 | 5101 | 90782001 | 90782474 | 3.530000e-58 | 237.0 |
54 | TraesCS2B01G418600 | chr5A | 89.375 | 160 | 17 | 0 | 1828 | 1987 | 708073071 | 708072912 | 1.290000e-47 | 202.0 |
55 | TraesCS2B01G418600 | chr7D | 95.448 | 747 | 29 | 5 | 2105 | 2849 | 2018654 | 2019397 | 0.000000e+00 | 1186.0 |
56 | TraesCS2B01G418600 | chr7D | 90.526 | 570 | 50 | 2 | 4533 | 5101 | 40943125 | 40942559 | 0.000000e+00 | 750.0 |
57 | TraesCS2B01G418600 | chr7D | 88.148 | 540 | 33 | 15 | 1 | 539 | 249487850 | 249487341 | 1.400000e-171 | 614.0 |
58 | TraesCS2B01G418600 | chr7D | 91.789 | 341 | 13 | 4 | 7237 | 7576 | 570478536 | 570478862 | 1.930000e-125 | 460.0 |
59 | TraesCS2B01G418600 | chr7D | 91.395 | 337 | 17 | 3 | 7240 | 7576 | 528798309 | 528797985 | 1.160000e-122 | 451.0 |
60 | TraesCS2B01G418600 | chr7D | 94.737 | 247 | 11 | 2 | 3189 | 3434 | 186632175 | 186631930 | 4.290000e-102 | 383.0 |
61 | TraesCS2B01G418600 | chr7D | 84.777 | 381 | 41 | 10 | 3657 | 4033 | 40943869 | 40943502 | 4.320000e-97 | 366.0 |
62 | TraesCS2B01G418600 | chr7D | 91.221 | 262 | 17 | 5 | 4246 | 4501 | 40943383 | 40943122 | 1.210000e-92 | 351.0 |
63 | TraesCS2B01G418600 | chr7D | 90.533 | 169 | 13 | 3 | 571 | 738 | 249487357 | 249487191 | 3.560000e-53 | 220.0 |
64 | TraesCS2B01G418600 | chr7D | 84.677 | 124 | 19 | 0 | 4081 | 4204 | 40943503 | 40943380 | 2.870000e-24 | 124.0 |
65 | TraesCS2B01G418600 | chr7D | 92.157 | 51 | 0 | 2 | 5150 | 5196 | 630454081 | 630454131 | 1.360000e-07 | 69.4 |
66 | TraesCS2B01G418600 | chr7D | 95.122 | 41 | 1 | 1 | 5161 | 5200 | 574117573 | 574117613 | 6.350000e-06 | 63.9 |
67 | TraesCS2B01G418600 | chr7D | 97.222 | 36 | 1 | 0 | 5161 | 5196 | 96523815 | 96523850 | 2.280000e-05 | 62.1 |
68 | TraesCS2B01G418600 | chr4B | 95.238 | 735 | 32 | 3 | 2117 | 2849 | 283351624 | 283350891 | 0.000000e+00 | 1160.0 |
69 | TraesCS2B01G418600 | chr4B | 94.706 | 340 | 6 | 3 | 7238 | 7576 | 574483127 | 574483455 | 1.130000e-142 | 518.0 |
70 | TraesCS2B01G418600 | chr4B | 94.444 | 342 | 6 | 4 | 7237 | 7576 | 654565497 | 654565827 | 1.460000e-141 | 514.0 |
71 | TraesCS2B01G418600 | chrUn | 92.985 | 784 | 48 | 6 | 2070 | 2849 | 55766912 | 55767692 | 0.000000e+00 | 1136.0 |
72 | TraesCS2B01G418600 | chrUn | 86.675 | 788 | 95 | 7 | 4317 | 5101 | 434625695 | 434626475 | 0.000000e+00 | 865.0 |
73 | TraesCS2B01G418600 | chrUn | 85.770 | 513 | 65 | 5 | 4317 | 4826 | 471855881 | 471855374 | 3.110000e-148 | 536.0 |
74 | TraesCS2B01G418600 | chrUn | 92.920 | 339 | 11 | 6 | 7238 | 7576 | 419018567 | 419018892 | 1.480000e-131 | 481.0 |
75 | TraesCS2B01G418600 | chrUn | 89.222 | 334 | 31 | 2 | 1318 | 1648 | 29287637 | 29287968 | 5.470000e-111 | 412.0 |
76 | TraesCS2B01G418600 | chrUn | 83.642 | 324 | 39 | 11 | 6252 | 6571 | 29289522 | 29289835 | 7.440000e-75 | 292.0 |
77 | TraesCS2B01G418600 | chrUn | 88.690 | 168 | 18 | 1 | 1818 | 1985 | 29288112 | 29288278 | 3.580000e-48 | 204.0 |
78 | TraesCS2B01G418600 | chrUn | 92.500 | 80 | 6 | 0 | 5885 | 5964 | 29289188 | 29289267 | 1.730000e-21 | 115.0 |
79 | TraesCS2B01G418600 | chr4A | 88.109 | 841 | 80 | 15 | 3730 | 4558 | 28657376 | 28656544 | 0.000000e+00 | 981.0 |
80 | TraesCS2B01G418600 | chr4A | 86.929 | 788 | 97 | 4 | 4317 | 5101 | 6048012 | 6047228 | 0.000000e+00 | 880.0 |
81 | TraesCS2B01G418600 | chr4A | 84.730 | 871 | 95 | 22 | 3549 | 4410 | 358812725 | 358811884 | 0.000000e+00 | 837.0 |
82 | TraesCS2B01G418600 | chr4A | 80.751 | 213 | 36 | 5 | 4892 | 5101 | 738369529 | 738369739 | 2.190000e-35 | 161.0 |
83 | TraesCS2B01G418600 | chr4A | 98.649 | 74 | 1 | 0 | 4240 | 4313 | 6054325 | 6054252 | 1.720000e-26 | 132.0 |
84 | TraesCS2B01G418600 | chr4A | 100.000 | 36 | 0 | 0 | 5161 | 5196 | 725844021 | 725843986 | 4.910000e-07 | 67.6 |
85 | TraesCS2B01G418600 | chr4A | 93.333 | 45 | 1 | 2 | 5161 | 5205 | 606802043 | 606802001 | 1.760000e-06 | 65.8 |
86 | TraesCS2B01G418600 | chr5D | 90.521 | 749 | 38 | 17 | 1 | 741 | 549431207 | 549430484 | 0.000000e+00 | 959.0 |
87 | TraesCS2B01G418600 | chr5D | 100.000 | 39 | 0 | 0 | 5161 | 5199 | 333984143 | 333984105 | 1.050000e-08 | 73.1 |
88 | TraesCS2B01G418600 | chr6A | 85.881 | 857 | 100 | 16 | 3565 | 4410 | 510796375 | 510797221 | 0.000000e+00 | 893.0 |
89 | TraesCS2B01G418600 | chr6A | 100.000 | 36 | 0 | 0 | 5161 | 5196 | 617742802 | 617742767 | 4.910000e-07 | 67.6 |
90 | TraesCS2B01G418600 | chr7A | 84.151 | 795 | 106 | 13 | 4319 | 5101 | 41476440 | 41477226 | 0.000000e+00 | 752.0 |
91 | TraesCS2B01G418600 | chr5B | 95.562 | 338 | 3 | 3 | 7240 | 7576 | 392229004 | 392228678 | 1.450000e-146 | 531.0 |
92 | TraesCS2B01G418600 | chr5B | 94.659 | 337 | 12 | 2 | 7240 | 7576 | 123769081 | 123768751 | 1.130000e-142 | 518.0 |
93 | TraesCS2B01G418600 | chr5B | 94.395 | 339 | 8 | 2 | 7238 | 7576 | 45895956 | 45896283 | 1.890000e-140 | 510.0 |
94 | TraesCS2B01G418600 | chr6B | 95.000 | 340 | 5 | 3 | 7238 | 7576 | 514459813 | 514459485 | 2.420000e-144 | 523.0 |
95 | TraesCS2B01G418600 | chr6B | 94.065 | 337 | 6 | 3 | 7240 | 7576 | 212622623 | 212622301 | 4.080000e-137 | 499.0 |
96 | TraesCS2B01G418600 | chr6B | 94.737 | 247 | 11 | 2 | 3189 | 3434 | 1114516 | 1114271 | 4.290000e-102 | 383.0 |
97 | TraesCS2B01G418600 | chr6B | 97.500 | 40 | 1 | 0 | 5161 | 5200 | 526030634 | 526030595 | 1.360000e-07 | 69.4 |
98 | TraesCS2B01G418600 | chr6B | 87.500 | 56 | 5 | 2 | 6813 | 6867 | 675212794 | 675212848 | 6.350000e-06 | 63.9 |
99 | TraesCS2B01G418600 | chr6B | 76.852 | 108 | 15 | 3 | 6821 | 6928 | 529399941 | 529400038 | 1.400000e-02 | 52.8 |
100 | TraesCS2B01G418600 | chr3B | 94.118 | 340 | 8 | 3 | 7238 | 7576 | 566171578 | 566171250 | 2.440000e-139 | 507.0 |
101 | TraesCS2B01G418600 | chr3B | 94.737 | 247 | 13 | 0 | 3189 | 3435 | 821829344 | 821829590 | 1.190000e-102 | 385.0 |
102 | TraesCS2B01G418600 | chr3B | 96.875 | 32 | 1 | 0 | 6828 | 6859 | 797518776 | 797518807 | 4.000000e-03 | 54.7 |
103 | TraesCS2B01G418600 | chr3B | 96.875 | 32 | 1 | 0 | 6828 | 6859 | 797537418 | 797537449 | 4.000000e-03 | 54.7 |
104 | TraesCS2B01G418600 | chr4D | 92.920 | 339 | 11 | 4 | 7238 | 7576 | 13227023 | 13226698 | 1.480000e-131 | 481.0 |
105 | TraesCS2B01G418600 | chr4D | 92.669 | 341 | 11 | 5 | 7237 | 7576 | 13235677 | 13235350 | 5.320000e-131 | 479.0 |
106 | TraesCS2B01G418600 | chr4D | 92.878 | 337 | 10 | 4 | 7240 | 7576 | 86757281 | 86757603 | 1.910000e-130 | 477.0 |
107 | TraesCS2B01G418600 | chr1A | 81.231 | 325 | 55 | 6 | 4781 | 5101 | 318377426 | 318377104 | 2.710000e-64 | 257.0 |
108 | TraesCS2B01G418600 | chr1A | 100.000 | 37 | 0 | 0 | 5161 | 5197 | 517891810 | 517891774 | 1.360000e-07 | 69.4 |
109 | TraesCS2B01G418600 | chr1D | 92.453 | 53 | 1 | 2 | 5150 | 5199 | 9800543 | 9800595 | 1.050000e-08 | 73.1 |
110 | TraesCS2B01G418600 | chr1D | 97.436 | 39 | 0 | 1 | 5161 | 5198 | 334245063 | 334245101 | 1.760000e-06 | 65.8 |
111 | TraesCS2B01G418600 | chr1D | 97.222 | 36 | 1 | 0 | 5163 | 5198 | 303078153 | 303078118 | 2.280000e-05 | 62.1 |
112 | TraesCS2B01G418600 | chr1D | 94.595 | 37 | 2 | 0 | 5160 | 5196 | 99685848 | 99685812 | 2.950000e-04 | 58.4 |
113 | TraesCS2B01G418600 | chr6D | 100.000 | 36 | 0 | 0 | 5161 | 5196 | 464795361 | 464795326 | 4.910000e-07 | 67.6 |
114 | TraesCS2B01G418600 | chr6D | 95.000 | 40 | 2 | 0 | 5161 | 5200 | 132027874 | 132027835 | 6.350000e-06 | 63.9 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G418600 | chr2B | 599807855 | 599815430 | 7575 | False | 3382.70 | 8104 | 98.00000 | 1 | 7576 | 4 | chr2B.!!$F2 | 7575 |
1 | TraesCS2B01G418600 | chr2B | 755620687 | 755621437 | 750 | True | 1155.00 | 1155 | 94.43000 | 2099 | 2849 | 1 | chr2B.!!$R2 | 750 |
2 | TraesCS2B01G418600 | chr2B | 27954652 | 27955289 | 637 | True | 811.00 | 811 | 89.70400 | 4466 | 5101 | 1 | chr2B.!!$R1 | 635 |
3 | TraesCS2B01G418600 | chr2A | 653857703 | 653863747 | 6044 | False | 985.50 | 2416 | 94.37850 | 623 | 7206 | 6 | chr2A.!!$F3 | 6583 |
4 | TraesCS2B01G418600 | chr2A | 603860344 | 603861198 | 854 | False | 911.00 | 911 | 86.02800 | 3553 | 4410 | 1 | chr2A.!!$F1 | 857 |
5 | TraesCS2B01G418600 | chr3A | 100435288 | 100436897 | 1609 | False | 1122.50 | 2058 | 90.95250 | 3425 | 5100 | 2 | chr3A.!!$F1 | 1675 |
6 | TraesCS2B01G418600 | chr2D | 510208514 | 510212955 | 4441 | False | 1337.80 | 2049 | 93.92800 | 414 | 7205 | 5 | chr2D.!!$F4 | 6791 |
7 | TraesCS2B01G418600 | chr2D | 510204962 | 510206421 | 1459 | True | 1068.00 | 1173 | 93.08850 | 3680 | 5101 | 2 | chr2D.!!$R2 | 1421 |
8 | TraesCS2B01G418600 | chr2D | 532168164 | 532168898 | 734 | False | 512.00 | 754 | 91.94900 | 4398 | 5101 | 2 | chr2D.!!$F5 | 703 |
9 | TraesCS2B01G418600 | chr1B | 62533016 | 62534521 | 1505 | True | 1772.00 | 1772 | 88.01600 | 3592 | 5101 | 1 | chr1B.!!$R1 | 1509 |
10 | TraesCS2B01G418600 | chr1B | 575893453 | 575894186 | 733 | True | 1164.00 | 1164 | 95.36800 | 2117 | 2847 | 1 | chr1B.!!$R3 | 730 |
11 | TraesCS2B01G418600 | chr1B | 120062396 | 120063132 | 736 | True | 1160.00 | 1160 | 95.12200 | 2114 | 2849 | 1 | chr1B.!!$R2 | 735 |
12 | TraesCS2B01G418600 | chr7B | 702192805 | 702194485 | 1680 | False | 1738.00 | 1738 | 85.58900 | 3425 | 5101 | 1 | chr7B.!!$F2 | 1676 |
13 | TraesCS2B01G418600 | chr7B | 8923969 | 8924701 | 732 | True | 1166.00 | 1166 | 95.37400 | 2117 | 2849 | 1 | chr7B.!!$R1 | 732 |
14 | TraesCS2B01G418600 | chr7B | 612403854 | 612405889 | 2035 | False | 248.00 | 405 | 87.81000 | 1329 | 6571 | 4 | chr7B.!!$F3 | 5242 |
15 | TraesCS2B01G418600 | chr3D | 84121328 | 84122479 | 1151 | False | 1640.00 | 1640 | 92.43300 | 3573 | 4724 | 1 | chr3D.!!$F1 | 1151 |
16 | TraesCS2B01G418600 | chr3D | 569062157 | 569062902 | 745 | True | 1155.00 | 1155 | 94.65200 | 2105 | 2849 | 1 | chr3D.!!$R2 | 744 |
17 | TraesCS2B01G418600 | chr5A | 10937323 | 10938347 | 1024 | False | 832.50 | 1249 | 97.86150 | 2117 | 3425 | 2 | chr5A.!!$F2 | 1308 |
18 | TraesCS2B01G418600 | chr5A | 708120327 | 708124369 | 4042 | True | 342.00 | 401 | 82.54200 | 1333 | 6393 | 2 | chr5A.!!$R3 | 5060 |
19 | TraesCS2B01G418600 | chr7D | 2018654 | 2019397 | 743 | False | 1186.00 | 1186 | 95.44800 | 2105 | 2849 | 1 | chr7D.!!$F1 | 744 |
20 | TraesCS2B01G418600 | chr7D | 249487191 | 249487850 | 659 | True | 417.00 | 614 | 89.34050 | 1 | 738 | 2 | chr7D.!!$R4 | 737 |
21 | TraesCS2B01G418600 | chr7D | 40942559 | 40943869 | 1310 | True | 397.75 | 750 | 87.80025 | 3657 | 5101 | 4 | chr7D.!!$R3 | 1444 |
22 | TraesCS2B01G418600 | chr4B | 283350891 | 283351624 | 733 | True | 1160.00 | 1160 | 95.23800 | 2117 | 2849 | 1 | chr4B.!!$R1 | 732 |
23 | TraesCS2B01G418600 | chrUn | 55766912 | 55767692 | 780 | False | 1136.00 | 1136 | 92.98500 | 2070 | 2849 | 1 | chrUn.!!$F1 | 779 |
24 | TraesCS2B01G418600 | chrUn | 434625695 | 434626475 | 780 | False | 865.00 | 865 | 86.67500 | 4317 | 5101 | 1 | chrUn.!!$F3 | 784 |
25 | TraesCS2B01G418600 | chrUn | 471855374 | 471855881 | 507 | True | 536.00 | 536 | 85.77000 | 4317 | 4826 | 1 | chrUn.!!$R1 | 509 |
26 | TraesCS2B01G418600 | chrUn | 29287637 | 29289835 | 2198 | False | 255.75 | 412 | 88.51350 | 1318 | 6571 | 4 | chrUn.!!$F4 | 5253 |
27 | TraesCS2B01G418600 | chr4A | 28656544 | 28657376 | 832 | True | 981.00 | 981 | 88.10900 | 3730 | 4558 | 1 | chr4A.!!$R3 | 828 |
28 | TraesCS2B01G418600 | chr4A | 6047228 | 6048012 | 784 | True | 880.00 | 880 | 86.92900 | 4317 | 5101 | 1 | chr4A.!!$R1 | 784 |
29 | TraesCS2B01G418600 | chr4A | 358811884 | 358812725 | 841 | True | 837.00 | 837 | 84.73000 | 3549 | 4410 | 1 | chr4A.!!$R4 | 861 |
30 | TraesCS2B01G418600 | chr5D | 549430484 | 549431207 | 723 | True | 959.00 | 959 | 90.52100 | 1 | 741 | 1 | chr5D.!!$R2 | 740 |
31 | TraesCS2B01G418600 | chr6A | 510796375 | 510797221 | 846 | False | 893.00 | 893 | 85.88100 | 3565 | 4410 | 1 | chr6A.!!$F1 | 845 |
32 | TraesCS2B01G418600 | chr7A | 41476440 | 41477226 | 786 | False | 752.00 | 752 | 84.15100 | 4319 | 5101 | 1 | chr7A.!!$F1 | 782 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
790 | 805 | 0.247736 | CCAGTGGCGCTAAGAGTCTT | 59.752 | 55.000 | 10.87 | 10.87 | 0.00 | 3.01 | F |
1038 | 1054 | 1.337384 | TGCCATACGCATCCCTCTGT | 61.337 | 55.000 | 0.00 | 0.00 | 44.64 | 3.41 | F |
1146 | 1162 | 1.773391 | ATCCATGGGCCTCCCTCTG | 60.773 | 63.158 | 13.02 | 1.41 | 45.70 | 3.35 | F |
1748 | 1771 | 2.354821 | GCGCCTTGTACTTTAGAATGGG | 59.645 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 | F |
1802 | 1825 | 3.186909 | GGGAATATTTTTGCGCCTTGTC | 58.813 | 45.455 | 4.18 | 0.00 | 0.00 | 3.18 | F |
3562 | 3727 | 1.672854 | TTCCCTCTCCGTATGCACCG | 61.673 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 | F |
3634 | 3803 | 0.035820 | GGAATTAGTCCGCCCACACA | 60.036 | 55.000 | 0.00 | 0.00 | 36.40 | 3.72 | F |
4598 | 4977 | 0.320374 | AATCACGGTTTGGAGCTCGA | 59.680 | 50.000 | 7.83 | 0.00 | 0.00 | 4.04 | F |
5418 | 5826 | 0.397957 | TAGACTTGATGGCCGCCCTA | 60.398 | 55.000 | 7.03 | 0.00 | 0.00 | 3.53 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1747 | 1770 | 2.093711 | ACAAGGCGCAAAAATATTCCCC | 60.094 | 45.455 | 10.83 | 0.0 | 0.00 | 4.81 | R |
2291 | 2437 | 4.133078 | TGTAAAATAACGGTTCGGGTGTT | 58.867 | 39.130 | 0.00 | 0.0 | 0.00 | 3.32 | R |
2329 | 2476 | 6.457663 | CGCGGATGAATTACCTAAAACATCAA | 60.458 | 38.462 | 0.00 | 0.0 | 35.54 | 2.57 | R |
3270 | 3420 | 0.336737 | ATCCTCCTTCTCACCCTCGT | 59.663 | 55.000 | 0.00 | 0.0 | 0.00 | 4.18 | R |
3596 | 3765 | 1.270199 | CCTCATGAGCTGGATTCGAGG | 60.270 | 57.143 | 17.76 | 0.0 | 33.19 | 4.63 | R |
5157 | 5537 | 0.253630 | AGGCCAGGGGTCATCCTTAA | 60.254 | 55.000 | 5.01 | 0.0 | 34.31 | 1.85 | R |
5172 | 5552 | 0.473326 | ATCTTCCAGATGCAGAGGCC | 59.527 | 55.000 | 0.00 | 0.0 | 40.13 | 5.19 | R |
6188 | 8942 | 0.174845 | CGTTTATGCGTCAGGGGAGA | 59.825 | 55.000 | 0.00 | 0.0 | 0.00 | 3.71 | R |
6974 | 10840 | 0.108804 | CGAGTGCACCACGGTATTCT | 60.109 | 55.000 | 21.07 | 0.0 | 39.64 | 2.40 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
194 | 196 | 8.794335 | AAGTCATCTAGTCTATGATGCGTATA | 57.206 | 34.615 | 11.51 | 0.00 | 39.69 | 1.47 |
233 | 235 | 4.438744 | CGTGCCAAGTCAAGAACTTTTCTT | 60.439 | 41.667 | 0.00 | 0.00 | 46.26 | 2.52 |
297 | 299 | 4.153296 | CAGACATGTGGTGCGTAAATTACA | 59.847 | 41.667 | 1.15 | 0.00 | 0.00 | 2.41 |
307 | 309 | 8.605746 | GTGGTGCGTAAATTACAGTGATATTTA | 58.394 | 33.333 | 0.00 | 3.94 | 0.00 | 1.40 |
339 | 341 | 1.462791 | CGACGGCAAGTTTCAACAAC | 58.537 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
345 | 349 | 4.693095 | ACGGCAAGTTTCAACAACAAAAAT | 59.307 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
455 | 459 | 6.014669 | AGTCTTGTATGGATAGAATGGAGAGC | 60.015 | 42.308 | 0.00 | 0.00 | 0.00 | 4.09 |
457 | 461 | 4.152647 | TGTATGGATAGAATGGAGAGCGT | 58.847 | 43.478 | 0.00 | 0.00 | 0.00 | 5.07 |
481 | 485 | 6.723298 | AAGAGTTCGATTCCTCTATGACAT | 57.277 | 37.500 | 9.41 | 0.00 | 37.06 | 3.06 |
482 | 486 | 6.723298 | AGAGTTCGATTCCTCTATGACATT | 57.277 | 37.500 | 7.73 | 0.00 | 36.30 | 2.71 |
566 | 570 | 5.392595 | GCTCATTAAACACGCCAATTAAGGA | 60.393 | 40.000 | 0.00 | 0.00 | 31.15 | 3.36 |
567 | 571 | 6.189677 | TCATTAAACACGCCAATTAAGGAG | 57.810 | 37.500 | 0.00 | 0.00 | 29.28 | 3.69 |
595 | 605 | 6.377327 | AAATCGTGCTAATGAATGGTAAGG | 57.623 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
596 | 606 | 4.746535 | TCGTGCTAATGAATGGTAAGGA | 57.253 | 40.909 | 0.00 | 0.00 | 0.00 | 3.36 |
597 | 607 | 4.693283 | TCGTGCTAATGAATGGTAAGGAG | 58.307 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
598 | 608 | 3.809832 | CGTGCTAATGAATGGTAAGGAGG | 59.190 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
599 | 609 | 4.442893 | CGTGCTAATGAATGGTAAGGAGGA | 60.443 | 45.833 | 0.00 | 0.00 | 0.00 | 3.71 |
600 | 610 | 5.437060 | GTGCTAATGAATGGTAAGGAGGAA | 58.563 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
601 | 611 | 5.885912 | GTGCTAATGAATGGTAAGGAGGAAA | 59.114 | 40.000 | 0.00 | 0.00 | 0.00 | 3.13 |
602 | 612 | 6.377146 | GTGCTAATGAATGGTAAGGAGGAAAA | 59.623 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
603 | 613 | 6.377146 | TGCTAATGAATGGTAAGGAGGAAAAC | 59.623 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
604 | 614 | 6.603599 | GCTAATGAATGGTAAGGAGGAAAACT | 59.396 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
605 | 615 | 7.201741 | GCTAATGAATGGTAAGGAGGAAAACTC | 60.202 | 40.741 | 0.00 | 0.00 | 45.84 | 3.01 |
790 | 805 | 0.247736 | CCAGTGGCGCTAAGAGTCTT | 59.752 | 55.000 | 10.87 | 10.87 | 0.00 | 3.01 |
821 | 836 | 3.735746 | CCTTCAAAATTCGAAAGGTGCAC | 59.264 | 43.478 | 8.80 | 8.80 | 0.00 | 4.57 |
834 | 849 | 2.858745 | AGGTGCACTTCCGTTTGTATT | 58.141 | 42.857 | 17.98 | 0.00 | 0.00 | 1.89 |
1038 | 1054 | 1.337384 | TGCCATACGCATCCCTCTGT | 61.337 | 55.000 | 0.00 | 0.00 | 44.64 | 3.41 |
1146 | 1162 | 1.773391 | ATCCATGGGCCTCCCTCTG | 60.773 | 63.158 | 13.02 | 1.41 | 45.70 | 3.35 |
1256 | 1272 | 5.007626 | GCTAAGCAAACGATGGTCATTATCA | 59.992 | 40.000 | 0.00 | 0.00 | 39.29 | 2.15 |
1257 | 1273 | 5.895636 | AAGCAAACGATGGTCATTATCAA | 57.104 | 34.783 | 0.00 | 0.00 | 39.29 | 2.57 |
1258 | 1274 | 6.455360 | AAGCAAACGATGGTCATTATCAAT | 57.545 | 33.333 | 0.00 | 0.00 | 39.29 | 2.57 |
1259 | 1275 | 6.455360 | AGCAAACGATGGTCATTATCAATT | 57.545 | 33.333 | 0.00 | 0.00 | 33.56 | 2.32 |
1260 | 1276 | 6.866480 | AGCAAACGATGGTCATTATCAATTT | 58.134 | 32.000 | 0.00 | 0.00 | 33.56 | 1.82 |
1261 | 1277 | 7.995289 | AGCAAACGATGGTCATTATCAATTTA | 58.005 | 30.769 | 0.00 | 0.00 | 33.56 | 1.40 |
1262 | 1278 | 8.632679 | AGCAAACGATGGTCATTATCAATTTAT | 58.367 | 29.630 | 0.00 | 0.00 | 33.56 | 1.40 |
1263 | 1279 | 8.905702 | GCAAACGATGGTCATTATCAATTTATC | 58.094 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
1586 | 1602 | 2.569354 | GCTCCTCGCCGAGATGGAT | 61.569 | 63.158 | 17.19 | 0.00 | 42.00 | 3.41 |
1697 | 1716 | 7.489160 | TGTAATCAGAATATACAAGAGTGCGT | 58.511 | 34.615 | 0.00 | 0.00 | 0.00 | 5.24 |
1747 | 1770 | 3.006940 | TGCGCCTTGTACTTTAGAATGG | 58.993 | 45.455 | 4.18 | 0.00 | 0.00 | 3.16 |
1748 | 1771 | 2.354821 | GCGCCTTGTACTTTAGAATGGG | 59.645 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1750 | 1773 | 3.288092 | GCCTTGTACTTTAGAATGGGGG | 58.712 | 50.000 | 0.00 | 0.00 | 0.00 | 5.40 |
1752 | 1775 | 4.569015 | GCCTTGTACTTTAGAATGGGGGAA | 60.569 | 45.833 | 0.00 | 0.00 | 0.00 | 3.97 |
1753 | 1776 | 5.766590 | CCTTGTACTTTAGAATGGGGGAAT | 58.233 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
1754 | 1777 | 6.636336 | GCCTTGTACTTTAGAATGGGGGAATA | 60.636 | 42.308 | 0.00 | 0.00 | 0.00 | 1.75 |
1755 | 1778 | 7.526918 | CCTTGTACTTTAGAATGGGGGAATAT | 58.473 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
1756 | 1779 | 8.004801 | CCTTGTACTTTAGAATGGGGGAATATT | 58.995 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
1757 | 1780 | 9.421399 | CTTGTACTTTAGAATGGGGGAATATTT | 57.579 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
1758 | 1781 | 9.777008 | TTGTACTTTAGAATGGGGGAATATTTT | 57.223 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
1759 | 1782 | 9.777008 | TGTACTTTAGAATGGGGGAATATTTTT | 57.223 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
1802 | 1825 | 3.186909 | GGGAATATTTTTGCGCCTTGTC | 58.813 | 45.455 | 4.18 | 0.00 | 0.00 | 3.18 |
2291 | 2437 | 3.646650 | CGCCGTCCGGATTTAAGTA | 57.353 | 52.632 | 7.81 | 0.00 | 37.50 | 2.24 |
3231 | 3381 | 6.677781 | AGGATTAACCATATTCAACACACG | 57.322 | 37.500 | 0.00 | 0.00 | 42.04 | 4.49 |
3293 | 3443 | 2.367241 | GAGGGTGAGAAGGAGGATAAGC | 59.633 | 54.545 | 0.00 | 0.00 | 0.00 | 3.09 |
3366 | 3516 | 4.999311 | TGATCTTGAGTGATGGTTGTTCAG | 59.001 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
3478 | 3629 | 7.930865 | CCTTCTTTGGTCCAATCAATTGTTTTA | 59.069 | 33.333 | 4.80 | 0.00 | 36.06 | 1.52 |
3485 | 3636 | 9.253832 | TGGTCCAATCAATTGTTTTATATGTCT | 57.746 | 29.630 | 5.13 | 0.00 | 36.06 | 3.41 |
3489 | 3640 | 8.917088 | CCAATCAATTGTTTTATATGTCTCCCT | 58.083 | 33.333 | 5.13 | 0.00 | 36.06 | 4.20 |
3562 | 3727 | 1.672854 | TTCCCTCTCCGTATGCACCG | 61.673 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
3563 | 3728 | 2.423898 | CCCTCTCCGTATGCACCGT | 61.424 | 63.158 | 6.83 | 0.00 | 0.00 | 4.83 |
3596 | 3765 | 4.514781 | AAAAATAAAGTTCCTCGTGGGC | 57.485 | 40.909 | 3.23 | 0.00 | 34.39 | 5.36 |
3634 | 3803 | 0.035820 | GGAATTAGTCCGCCCACACA | 60.036 | 55.000 | 0.00 | 0.00 | 36.40 | 3.72 |
3643 | 3812 | 1.178534 | CCGCCCACACAAACCAATCT | 61.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3673 | 3843 | 6.540914 | ACCTATCGTGTTGTTTGAGAAAGAAA | 59.459 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
3678 | 3848 | 7.021196 | TCGTGTTGTTTGAGAAAGAAAAAGAG | 58.979 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
4195 | 4470 | 4.437682 | AAAGAAGTCCCATTGTGACTCA | 57.562 | 40.909 | 2.13 | 0.00 | 42.10 | 3.41 |
4196 | 4471 | 3.409026 | AGAAGTCCCATTGTGACTCAC | 57.591 | 47.619 | 2.13 | 1.86 | 42.10 | 3.51 |
4314 | 4632 | 9.462174 | TGATGTTGTTTTTGTTGAATCTCATAC | 57.538 | 29.630 | 0.00 | 0.00 | 0.00 | 2.39 |
4459 | 4795 | 3.088532 | GTCACCCCAAATCATTGCACTA | 58.911 | 45.455 | 0.00 | 0.00 | 35.10 | 2.74 |
4529 | 4875 | 8.193953 | AGCCATATTCGATTTATTTTTGGGAT | 57.806 | 30.769 | 0.00 | 0.00 | 0.00 | 3.85 |
4598 | 4977 | 0.320374 | AATCACGGTTTGGAGCTCGA | 59.680 | 50.000 | 7.83 | 0.00 | 0.00 | 4.04 |
4647 | 5027 | 1.603678 | GGCATGGCAGAACAACACAAG | 60.604 | 52.381 | 15.47 | 0.00 | 0.00 | 3.16 |
4727 | 5107 | 1.977188 | CGACAGTGAAGTGTATGCGA | 58.023 | 50.000 | 0.00 | 0.00 | 0.00 | 5.10 |
4729 | 5109 | 2.531912 | CGACAGTGAAGTGTATGCGATC | 59.468 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4738 | 5118 | 6.310467 | GTGAAGTGTATGCGATCTAAGTTGAA | 59.690 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
4743 | 5123 | 7.712639 | AGTGTATGCGATCTAAGTTGAATCAAT | 59.287 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
4954 | 5334 | 4.510571 | TGAGTGTGATGACCAAGATCATG | 58.489 | 43.478 | 0.00 | 0.00 | 39.48 | 3.07 |
4989 | 5369 | 5.300034 | TGATCACATTGGATGAAATAGGTGC | 59.700 | 40.000 | 0.00 | 0.00 | 0.00 | 5.01 |
5052 | 5432 | 2.917971 | GACAACACAGATGACTCGCTAC | 59.082 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
5060 | 5440 | 0.963856 | ATGACTCGCTACGGGTGTGA | 60.964 | 55.000 | 0.00 | 0.00 | 42.20 | 3.58 |
5101 | 5481 | 1.489574 | CAACGCATGTGCATTTGTGT | 58.510 | 45.000 | 6.08 | 11.05 | 42.21 | 3.72 |
5102 | 5482 | 2.659387 | CAACGCATGTGCATTTGTGTA | 58.341 | 42.857 | 15.61 | 0.00 | 42.21 | 2.90 |
5103 | 5483 | 3.244156 | CAACGCATGTGCATTTGTGTAT | 58.756 | 40.909 | 15.61 | 6.49 | 42.21 | 2.29 |
5104 | 5484 | 3.574284 | ACGCATGTGCATTTGTGTATT | 57.426 | 38.095 | 14.20 | 0.00 | 42.21 | 1.89 |
5105 | 5485 | 3.911868 | ACGCATGTGCATTTGTGTATTT | 58.088 | 36.364 | 14.20 | 0.00 | 42.21 | 1.40 |
5106 | 5486 | 3.674281 | ACGCATGTGCATTTGTGTATTTG | 59.326 | 39.130 | 14.20 | 0.00 | 42.21 | 2.32 |
5107 | 5487 | 3.674281 | CGCATGTGCATTTGTGTATTTGT | 59.326 | 39.130 | 5.77 | 0.00 | 42.21 | 2.83 |
5108 | 5488 | 4.433152 | CGCATGTGCATTTGTGTATTTGTG | 60.433 | 41.667 | 5.77 | 0.00 | 42.21 | 3.33 |
5109 | 5489 | 4.667161 | GCATGTGCATTTGTGTATTTGTGC | 60.667 | 41.667 | 0.00 | 0.00 | 41.59 | 4.57 |
5110 | 5490 | 4.319139 | TGTGCATTTGTGTATTTGTGCT | 57.681 | 36.364 | 0.00 | 0.00 | 33.95 | 4.40 |
5111 | 5491 | 5.444663 | TGTGCATTTGTGTATTTGTGCTA | 57.555 | 34.783 | 0.00 | 0.00 | 33.95 | 3.49 |
5112 | 5492 | 5.459768 | TGTGCATTTGTGTATTTGTGCTAG | 58.540 | 37.500 | 0.00 | 0.00 | 33.95 | 3.42 |
5113 | 5493 | 5.009510 | TGTGCATTTGTGTATTTGTGCTAGT | 59.990 | 36.000 | 0.00 | 0.00 | 33.95 | 2.57 |
5114 | 5494 | 6.205658 | TGTGCATTTGTGTATTTGTGCTAGTA | 59.794 | 34.615 | 0.00 | 0.00 | 33.95 | 1.82 |
5115 | 5495 | 6.523201 | GTGCATTTGTGTATTTGTGCTAGTAC | 59.477 | 38.462 | 3.70 | 3.70 | 33.95 | 2.73 |
5116 | 5496 | 6.429692 | TGCATTTGTGTATTTGTGCTAGTACT | 59.570 | 34.615 | 12.42 | 0.00 | 33.95 | 2.73 |
5117 | 5497 | 7.604545 | TGCATTTGTGTATTTGTGCTAGTACTA | 59.395 | 33.333 | 12.42 | 1.89 | 33.95 | 1.82 |
5118 | 5498 | 8.612619 | GCATTTGTGTATTTGTGCTAGTACTAT | 58.387 | 33.333 | 12.42 | 8.15 | 0.00 | 2.12 |
5131 | 5511 | 9.515226 | TGTGCTAGTACTATATACACATGATCA | 57.485 | 33.333 | 17.39 | 0.00 | 32.06 | 2.92 |
5140 | 5520 | 9.249457 | ACTATATACACATGATCAAACAGAACG | 57.751 | 33.333 | 0.00 | 0.00 | 0.00 | 3.95 |
5141 | 5521 | 3.542712 | ACACATGATCAAACAGAACGC | 57.457 | 42.857 | 0.00 | 0.00 | 0.00 | 4.84 |
5142 | 5522 | 2.877786 | ACACATGATCAAACAGAACGCA | 59.122 | 40.909 | 0.00 | 0.00 | 0.00 | 5.24 |
5143 | 5523 | 3.228749 | CACATGATCAAACAGAACGCAC | 58.771 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
5144 | 5524 | 2.096268 | ACATGATCAAACAGAACGCACG | 60.096 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
5145 | 5525 | 1.859383 | TGATCAAACAGAACGCACGA | 58.141 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
5146 | 5526 | 1.792367 | TGATCAAACAGAACGCACGAG | 59.208 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
5147 | 5527 | 1.792949 | GATCAAACAGAACGCACGAGT | 59.207 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
5148 | 5528 | 0.927537 | TCAAACAGAACGCACGAGTG | 59.072 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5149 | 5529 | 0.650512 | CAAACAGAACGCACGAGTGT | 59.349 | 50.000 | 5.07 | 0.00 | 40.99 | 3.55 |
5300 | 5708 | 2.303022 | TGCTCAAGGACCTACTGAAAGG | 59.697 | 50.000 | 0.00 | 0.00 | 42.82 | 3.11 |
5390 | 5798 | 2.649531 | AGGGGAGTGATAGACGAGAG | 57.350 | 55.000 | 0.00 | 0.00 | 0.00 | 3.20 |
5418 | 5826 | 0.397957 | TAGACTTGATGGCCGCCCTA | 60.398 | 55.000 | 7.03 | 0.00 | 0.00 | 3.53 |
5554 | 7832 | 5.362556 | AGTGTTTGTTGCTGCAACTATAG | 57.637 | 39.130 | 36.41 | 0.00 | 43.85 | 1.31 |
5576 | 7854 | 8.948853 | ATAGTCGTGTACATTTTGTCAATTTG | 57.051 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
5599 | 7877 | 8.696410 | TTGAATGGTTAAAAGAACAAAGACAC | 57.304 | 30.769 | 0.00 | 0.00 | 0.00 | 3.67 |
5617 | 7895 | 6.232581 | AGACACTAGCTGCAGATAAGATTT | 57.767 | 37.500 | 20.43 | 0.00 | 0.00 | 2.17 |
5875 | 8529 | 3.567478 | ACTCAAGCCAACTTTCTCTGT | 57.433 | 42.857 | 0.00 | 0.00 | 32.29 | 3.41 |
5881 | 8535 | 4.439253 | AGCCAACTTTCTCTGTAGGTTT | 57.561 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
6033 | 8762 | 5.351465 | CGTCAAGTTGTGCTAGTTAATGGAT | 59.649 | 40.000 | 2.11 | 0.00 | 0.00 | 3.41 |
6132 | 8886 | 5.514274 | TGAACCCAGAATTGTTCAAAGAC | 57.486 | 39.130 | 6.61 | 0.00 | 45.64 | 3.01 |
6175 | 8929 | 1.304617 | TGGCAGGTTGGTGACACAA | 59.695 | 52.632 | 8.08 | 0.00 | 42.67 | 3.33 |
6177 | 8931 | 1.039856 | GGCAGGTTGGTGACACAATT | 58.960 | 50.000 | 8.08 | 0.00 | 42.67 | 2.32 |
6179 | 8933 | 1.000274 | GCAGGTTGGTGACACAATTCC | 60.000 | 52.381 | 8.08 | 2.47 | 42.67 | 3.01 |
6180 | 8934 | 2.586425 | CAGGTTGGTGACACAATTCCT | 58.414 | 47.619 | 8.08 | 4.79 | 42.67 | 3.36 |
6181 | 8935 | 2.554032 | CAGGTTGGTGACACAATTCCTC | 59.446 | 50.000 | 8.08 | 0.00 | 42.67 | 3.71 |
6183 | 8937 | 2.489971 | GTTGGTGACACAATTCCTCGA | 58.510 | 47.619 | 8.08 | 0.00 | 42.67 | 4.04 |
6184 | 8938 | 2.163818 | TGGTGACACAATTCCTCGAC | 57.836 | 50.000 | 8.08 | 0.00 | 33.40 | 4.20 |
6185 | 8939 | 1.270625 | TGGTGACACAATTCCTCGACC | 60.271 | 52.381 | 8.08 | 0.00 | 33.40 | 4.79 |
6186 | 8940 | 1.270625 | GGTGACACAATTCCTCGACCA | 60.271 | 52.381 | 8.08 | 0.00 | 0.00 | 4.02 |
6188 | 8942 | 1.691976 | TGACACAATTCCTCGACCACT | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
6189 | 8943 | 2.288825 | TGACACAATTCCTCGACCACTC | 60.289 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6190 | 8944 | 1.971357 | ACACAATTCCTCGACCACTCT | 59.029 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
6192 | 8946 | 1.550976 | ACAATTCCTCGACCACTCTCC | 59.449 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
6193 | 8947 | 1.134670 | CAATTCCTCGACCACTCTCCC | 60.135 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
6194 | 8948 | 0.688087 | ATTCCTCGACCACTCTCCCC | 60.688 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
6195 | 8949 | 1.801302 | TTCCTCGACCACTCTCCCCT | 61.801 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
6196 | 8950 | 2.055042 | CCTCGACCACTCTCCCCTG | 61.055 | 68.421 | 0.00 | 0.00 | 0.00 | 4.45 |
6197 | 8951 | 1.000771 | CTCGACCACTCTCCCCTGA | 60.001 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
6206 | 8960 | 1.207329 | ACTCTCCCCTGACGCATAAAC | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
6683 | 9469 | 6.540438 | ACTTCTTCATAAGTTGGGTATCGA | 57.460 | 37.500 | 0.00 | 0.00 | 36.26 | 3.59 |
6714 | 9500 | 2.386249 | GCAGCGATAGTTTCTCTACCG | 58.614 | 52.381 | 0.00 | 0.00 | 38.58 | 4.02 |
6726 | 9512 | 4.405116 | TTCTCTACCGTCTCTCCTCTAC | 57.595 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
6733 | 9519 | 3.190874 | CCGTCTCTCCTCTACAAAATGC | 58.809 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
6783 | 9569 | 9.012161 | GTCTACTACTATCTCGTTATTTCCCAT | 57.988 | 37.037 | 0.00 | 0.00 | 0.00 | 4.00 |
6928 | 10794 | 3.366052 | TTTTGGGATGGAGGAAGTAGC | 57.634 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
6934 | 10800 | 4.665009 | TGGGATGGAGGAAGTAGCATAAAT | 59.335 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
6971 | 10837 | 2.032071 | GGGAAGTGGGTCACGGTG | 59.968 | 66.667 | 0.56 | 0.56 | 39.64 | 4.94 |
6972 | 10838 | 2.814835 | GGGAAGTGGGTCACGGTGT | 61.815 | 63.158 | 8.17 | 0.00 | 39.64 | 4.16 |
6973 | 10839 | 1.597027 | GGAAGTGGGTCACGGTGTG | 60.597 | 63.158 | 8.17 | 0.00 | 39.64 | 3.82 |
6974 | 10840 | 1.444250 | GAAGTGGGTCACGGTGTGA | 59.556 | 57.895 | 8.17 | 0.00 | 40.50 | 3.58 |
6975 | 10841 | 0.600255 | GAAGTGGGTCACGGTGTGAG | 60.600 | 60.000 | 8.17 | 0.00 | 43.57 | 3.51 |
6976 | 10842 | 1.046472 | AAGTGGGTCACGGTGTGAGA | 61.046 | 55.000 | 8.17 | 0.00 | 43.57 | 3.27 |
6977 | 10843 | 1.046472 | AGTGGGTCACGGTGTGAGAA | 61.046 | 55.000 | 8.17 | 0.00 | 43.57 | 2.87 |
6978 | 10844 | 0.034896 | GTGGGTCACGGTGTGAGAAT | 59.965 | 55.000 | 8.17 | 0.00 | 43.57 | 2.40 |
6979 | 10845 | 1.274167 | GTGGGTCACGGTGTGAGAATA | 59.726 | 52.381 | 8.17 | 0.00 | 43.57 | 1.75 |
6980 | 10846 | 1.274167 | TGGGTCACGGTGTGAGAATAC | 59.726 | 52.381 | 8.17 | 0.00 | 43.57 | 1.89 |
6981 | 10847 | 1.405121 | GGGTCACGGTGTGAGAATACC | 60.405 | 57.143 | 8.17 | 6.22 | 43.57 | 2.73 |
7015 | 10881 | 2.672961 | TGCCAGCGCATCCTATATAC | 57.327 | 50.000 | 11.47 | 0.00 | 41.12 | 1.47 |
7016 | 10882 | 1.899142 | TGCCAGCGCATCCTATATACA | 59.101 | 47.619 | 11.47 | 0.00 | 41.12 | 2.29 |
7017 | 10883 | 2.271800 | GCCAGCGCATCCTATATACAC | 58.728 | 52.381 | 11.47 | 0.00 | 34.03 | 2.90 |
7018 | 10884 | 2.353704 | GCCAGCGCATCCTATATACACA | 60.354 | 50.000 | 11.47 | 0.00 | 34.03 | 3.72 |
7019 | 10885 | 3.864540 | GCCAGCGCATCCTATATACACAA | 60.865 | 47.826 | 11.47 | 0.00 | 34.03 | 3.33 |
7020 | 10886 | 4.314961 | CCAGCGCATCCTATATACACAAA | 58.685 | 43.478 | 11.47 | 0.00 | 0.00 | 2.83 |
7021 | 10887 | 4.754618 | CCAGCGCATCCTATATACACAAAA | 59.245 | 41.667 | 11.47 | 0.00 | 0.00 | 2.44 |
7022 | 10888 | 5.412594 | CCAGCGCATCCTATATACACAAAAT | 59.587 | 40.000 | 11.47 | 0.00 | 0.00 | 1.82 |
7023 | 10889 | 6.593770 | CCAGCGCATCCTATATACACAAAATA | 59.406 | 38.462 | 11.47 | 0.00 | 0.00 | 1.40 |
7104 | 11910 | 4.611366 | GCACTCGAATAAAAAGTTTCACCG | 59.389 | 41.667 | 0.00 | 0.00 | 0.00 | 4.94 |
7186 | 11992 | 6.811665 | GCGTGAACCATAGCTTGTATATATCA | 59.188 | 38.462 | 0.00 | 0.00 | 0.00 | 2.15 |
7220 | 12026 | 6.761731 | TTTTTCCAGCGAACATTTTACATG | 57.238 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
7221 | 12027 | 5.697473 | TTTCCAGCGAACATTTTACATGA | 57.303 | 34.783 | 0.00 | 0.00 | 0.00 | 3.07 |
7222 | 12028 | 4.944962 | TCCAGCGAACATTTTACATGAG | 57.055 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
7223 | 12029 | 4.323417 | TCCAGCGAACATTTTACATGAGT | 58.677 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
7224 | 12030 | 5.483811 | TCCAGCGAACATTTTACATGAGTA | 58.516 | 37.500 | 0.00 | 0.00 | 0.00 | 2.59 |
7225 | 12031 | 5.350365 | TCCAGCGAACATTTTACATGAGTAC | 59.650 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
7226 | 12032 | 5.121611 | CCAGCGAACATTTTACATGAGTACA | 59.878 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
7227 | 12033 | 6.348132 | CCAGCGAACATTTTACATGAGTACAA | 60.348 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
7228 | 12034 | 7.243487 | CAGCGAACATTTTACATGAGTACAAT | 58.757 | 34.615 | 0.00 | 0.00 | 32.33 | 2.71 |
7229 | 12035 | 8.387354 | CAGCGAACATTTTACATGAGTACAATA | 58.613 | 33.333 | 0.00 | 0.00 | 30.84 | 1.90 |
7230 | 12036 | 8.388103 | AGCGAACATTTTACATGAGTACAATAC | 58.612 | 33.333 | 0.00 | 0.00 | 30.84 | 1.89 |
7231 | 12037 | 8.388103 | GCGAACATTTTACATGAGTACAATACT | 58.612 | 33.333 | 0.00 | 0.00 | 42.86 | 2.12 |
7242 | 12048 | 9.671279 | ACATGAGTACAATACTTGATCATTGAA | 57.329 | 29.630 | 12.56 | 0.00 | 39.59 | 2.69 |
7245 | 12051 | 9.942850 | TGAGTACAATACTTGATCATTGAAAGA | 57.057 | 29.630 | 12.56 | 0.00 | 39.59 | 2.52 |
7248 | 12054 | 9.855361 | GTACAATACTTGATCATTGAAAGATCG | 57.145 | 33.333 | 12.56 | 0.00 | 43.73 | 3.69 |
7249 | 12055 | 8.498054 | ACAATACTTGATCATTGAAAGATCGT | 57.502 | 30.769 | 12.56 | 2.11 | 43.73 | 3.73 |
7250 | 12056 | 8.393366 | ACAATACTTGATCATTGAAAGATCGTG | 58.607 | 33.333 | 12.56 | 4.10 | 43.73 | 4.35 |
7251 | 12057 | 5.808042 | ACTTGATCATTGAAAGATCGTGG | 57.192 | 39.130 | 6.01 | 2.05 | 43.73 | 4.94 |
7252 | 12058 | 5.491070 | ACTTGATCATTGAAAGATCGTGGA | 58.509 | 37.500 | 6.01 | 0.00 | 43.73 | 4.02 |
7253 | 12059 | 6.118170 | ACTTGATCATTGAAAGATCGTGGAT | 58.882 | 36.000 | 6.01 | 0.00 | 43.73 | 3.41 |
7254 | 12060 | 5.996669 | TGATCATTGAAAGATCGTGGATG | 57.003 | 39.130 | 6.01 | 0.00 | 43.73 | 3.51 |
7255 | 12061 | 5.430886 | TGATCATTGAAAGATCGTGGATGT | 58.569 | 37.500 | 6.01 | 0.00 | 43.73 | 3.06 |
7256 | 12062 | 5.525012 | TGATCATTGAAAGATCGTGGATGTC | 59.475 | 40.000 | 6.01 | 0.00 | 43.73 | 3.06 |
7257 | 12063 | 3.865164 | TCATTGAAAGATCGTGGATGTCG | 59.135 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
7258 | 12064 | 1.640428 | TGAAAGATCGTGGATGTCGC | 58.360 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
7259 | 12065 | 0.931005 | GAAAGATCGTGGATGTCGCC | 59.069 | 55.000 | 0.00 | 0.00 | 0.00 | 5.54 |
7260 | 12066 | 0.537188 | AAAGATCGTGGATGTCGCCT | 59.463 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
7261 | 12067 | 0.179100 | AAGATCGTGGATGTCGCCTG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
7262 | 12068 | 1.592669 | GATCGTGGATGTCGCCTGG | 60.593 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
7263 | 12069 | 2.978452 | GATCGTGGATGTCGCCTGGG | 62.978 | 65.000 | 0.00 | 0.00 | 0.00 | 4.45 |
7264 | 12070 | 4.838152 | CGTGGATGTCGCCTGGGG | 62.838 | 72.222 | 4.03 | 4.03 | 0.00 | 4.96 |
7265 | 12071 | 4.489771 | GTGGATGTCGCCTGGGGG | 62.490 | 72.222 | 11.17 | 0.78 | 0.00 | 5.40 |
7286 | 12092 | 2.595655 | GGGGGTTGAATAGGCGCT | 59.404 | 61.111 | 7.64 | 0.00 | 0.00 | 5.92 |
7287 | 12093 | 1.076995 | GGGGGTTGAATAGGCGCTT | 60.077 | 57.895 | 7.64 | 0.52 | 0.00 | 4.68 |
7288 | 12094 | 0.683179 | GGGGGTTGAATAGGCGCTTT | 60.683 | 55.000 | 7.64 | 0.00 | 0.00 | 3.51 |
7289 | 12095 | 1.409101 | GGGGGTTGAATAGGCGCTTTA | 60.409 | 52.381 | 7.64 | 0.23 | 0.00 | 1.85 |
7290 | 12096 | 2.371306 | GGGGTTGAATAGGCGCTTTAA | 58.629 | 47.619 | 7.64 | 0.00 | 0.00 | 1.52 |
7291 | 12097 | 2.756207 | GGGGTTGAATAGGCGCTTTAAA | 59.244 | 45.455 | 7.64 | 0.00 | 0.00 | 1.52 |
7292 | 12098 | 3.193903 | GGGGTTGAATAGGCGCTTTAAAA | 59.806 | 43.478 | 7.64 | 0.00 | 0.00 | 1.52 |
7293 | 12099 | 4.142026 | GGGGTTGAATAGGCGCTTTAAAAT | 60.142 | 41.667 | 7.64 | 0.00 | 0.00 | 1.82 |
7294 | 12100 | 5.068067 | GGGGTTGAATAGGCGCTTTAAAATA | 59.932 | 40.000 | 7.64 | 0.00 | 0.00 | 1.40 |
7295 | 12101 | 6.406065 | GGGGTTGAATAGGCGCTTTAAAATAA | 60.406 | 38.462 | 7.64 | 0.00 | 0.00 | 1.40 |
7296 | 12102 | 7.207383 | GGGTTGAATAGGCGCTTTAAAATAAT | 58.793 | 34.615 | 7.64 | 0.00 | 0.00 | 1.28 |
7297 | 12103 | 7.709182 | GGGTTGAATAGGCGCTTTAAAATAATT | 59.291 | 33.333 | 7.64 | 0.00 | 0.00 | 1.40 |
7298 | 12104 | 9.738832 | GGTTGAATAGGCGCTTTAAAATAATTA | 57.261 | 29.630 | 7.64 | 0.00 | 0.00 | 1.40 |
7300 | 12106 | 8.996988 | TGAATAGGCGCTTTAAAATAATTACG | 57.003 | 30.769 | 7.64 | 0.00 | 0.00 | 3.18 |
7301 | 12107 | 8.071368 | TGAATAGGCGCTTTAAAATAATTACGG | 58.929 | 33.333 | 7.64 | 0.00 | 0.00 | 4.02 |
7302 | 12108 | 5.823209 | AGGCGCTTTAAAATAATTACGGT | 57.177 | 34.783 | 7.64 | 0.00 | 0.00 | 4.83 |
7303 | 12109 | 6.198650 | AGGCGCTTTAAAATAATTACGGTT | 57.801 | 33.333 | 7.64 | 0.00 | 0.00 | 4.44 |
7304 | 12110 | 6.623486 | AGGCGCTTTAAAATAATTACGGTTT | 58.377 | 32.000 | 7.64 | 0.00 | 0.00 | 3.27 |
7305 | 12111 | 7.760437 | AGGCGCTTTAAAATAATTACGGTTTA | 58.240 | 30.769 | 7.64 | 0.00 | 0.00 | 2.01 |
7306 | 12112 | 7.911727 | AGGCGCTTTAAAATAATTACGGTTTAG | 59.088 | 33.333 | 7.64 | 0.00 | 0.00 | 1.85 |
7307 | 12113 | 7.166307 | GGCGCTTTAAAATAATTACGGTTTAGG | 59.834 | 37.037 | 7.64 | 0.00 | 0.00 | 2.69 |
7308 | 12114 | 7.305590 | GCGCTTTAAAATAATTACGGTTTAGGC | 60.306 | 37.037 | 0.00 | 2.57 | 0.00 | 3.93 |
7309 | 12115 | 7.911727 | CGCTTTAAAATAATTACGGTTTAGGCT | 59.088 | 33.333 | 0.00 | 0.00 | 0.00 | 4.58 |
7310 | 12116 | 9.577110 | GCTTTAAAATAATTACGGTTTAGGCTT | 57.423 | 29.630 | 0.00 | 0.00 | 0.00 | 4.35 |
7314 | 12120 | 8.975410 | AAAATAATTACGGTTTAGGCTTGAAC | 57.025 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
7315 | 12121 | 7.690952 | AATAATTACGGTTTAGGCTTGAACA | 57.309 | 32.000 | 5.84 | 0.00 | 0.00 | 3.18 |
7316 | 12122 | 7.690952 | ATAATTACGGTTTAGGCTTGAACAA | 57.309 | 32.000 | 5.84 | 0.00 | 0.00 | 2.83 |
7317 | 12123 | 6.394025 | AATTACGGTTTAGGCTTGAACAAA | 57.606 | 33.333 | 5.84 | 0.00 | 0.00 | 2.83 |
7318 | 12124 | 6.584185 | ATTACGGTTTAGGCTTGAACAAAT | 57.416 | 33.333 | 5.84 | 0.26 | 0.00 | 2.32 |
7319 | 12125 | 4.237349 | ACGGTTTAGGCTTGAACAAATG | 57.763 | 40.909 | 5.84 | 0.00 | 0.00 | 2.32 |
7320 | 12126 | 2.986479 | CGGTTTAGGCTTGAACAAATGC | 59.014 | 45.455 | 5.84 | 0.00 | 0.00 | 3.56 |
7321 | 12127 | 2.986479 | GGTTTAGGCTTGAACAAATGCG | 59.014 | 45.455 | 5.84 | 0.00 | 0.00 | 4.73 |
7322 | 12128 | 2.986479 | GTTTAGGCTTGAACAAATGCGG | 59.014 | 45.455 | 0.00 | 0.00 | 0.00 | 5.69 |
7323 | 12129 | 2.192664 | TAGGCTTGAACAAATGCGGA | 57.807 | 45.000 | 0.00 | 0.00 | 0.00 | 5.54 |
7324 | 12130 | 1.327303 | AGGCTTGAACAAATGCGGAA | 58.673 | 45.000 | 0.00 | 0.00 | 0.00 | 4.30 |
7325 | 12131 | 1.895131 | AGGCTTGAACAAATGCGGAAT | 59.105 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
7326 | 12132 | 3.088532 | AGGCTTGAACAAATGCGGAATA | 58.911 | 40.909 | 0.00 | 0.00 | 0.00 | 1.75 |
7327 | 12133 | 3.509575 | AGGCTTGAACAAATGCGGAATAA | 59.490 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
7328 | 12134 | 4.021544 | AGGCTTGAACAAATGCGGAATAAA | 60.022 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
7329 | 12135 | 4.091365 | GGCTTGAACAAATGCGGAATAAAC | 59.909 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
7330 | 12136 | 4.091365 | GCTTGAACAAATGCGGAATAAACC | 59.909 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
7331 | 12137 | 5.461032 | TTGAACAAATGCGGAATAAACCT | 57.539 | 34.783 | 0.00 | 0.00 | 0.00 | 3.50 |
7332 | 12138 | 6.576662 | TTGAACAAATGCGGAATAAACCTA | 57.423 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
7333 | 12139 | 6.189677 | TGAACAAATGCGGAATAAACCTAG | 57.810 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
7334 | 12140 | 4.632538 | ACAAATGCGGAATAAACCTAGC | 57.367 | 40.909 | 0.00 | 0.00 | 0.00 | 3.42 |
7335 | 12141 | 3.064820 | ACAAATGCGGAATAAACCTAGCG | 59.935 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
7336 | 12142 | 1.878953 | ATGCGGAATAAACCTAGCGG | 58.121 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
7350 | 12156 | 3.439129 | ACCTAGCGGTTAATTTGTCAAGC | 59.561 | 43.478 | 0.00 | 0.00 | 42.13 | 4.01 |
7351 | 12157 | 3.438781 | CCTAGCGGTTAATTTGTCAAGCA | 59.561 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
7352 | 12158 | 3.282831 | AGCGGTTAATTTGTCAAGCAC | 57.717 | 42.857 | 0.00 | 0.00 | 0.00 | 4.40 |
7353 | 12159 | 2.621055 | AGCGGTTAATTTGTCAAGCACA | 59.379 | 40.909 | 0.00 | 0.00 | 0.00 | 4.57 |
7354 | 12160 | 3.067461 | AGCGGTTAATTTGTCAAGCACAA | 59.933 | 39.130 | 0.00 | 0.00 | 43.68 | 3.33 |
7365 | 12171 | 5.392767 | TGTCAAGCACAAAACCTAAAACA | 57.607 | 34.783 | 0.00 | 0.00 | 29.30 | 2.83 |
7366 | 12172 | 5.784177 | TGTCAAGCACAAAACCTAAAACAA | 58.216 | 33.333 | 0.00 | 0.00 | 29.30 | 2.83 |
7367 | 12173 | 5.635700 | TGTCAAGCACAAAACCTAAAACAAC | 59.364 | 36.000 | 0.00 | 0.00 | 29.30 | 3.32 |
7368 | 12174 | 5.867174 | GTCAAGCACAAAACCTAAAACAACT | 59.133 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7369 | 12175 | 7.030768 | GTCAAGCACAAAACCTAAAACAACTA | 58.969 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
7370 | 12176 | 7.220108 | GTCAAGCACAAAACCTAAAACAACTAG | 59.780 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
7371 | 12177 | 6.144078 | AGCACAAAACCTAAAACAACTAGG | 57.856 | 37.500 | 0.00 | 0.00 | 41.61 | 3.02 |
7372 | 12178 | 4.743151 | GCACAAAACCTAAAACAACTAGGC | 59.257 | 41.667 | 0.00 | 0.00 | 39.78 | 3.93 |
7373 | 12179 | 5.451381 | GCACAAAACCTAAAACAACTAGGCT | 60.451 | 40.000 | 0.00 | 0.00 | 39.78 | 4.58 |
7374 | 12180 | 6.206498 | CACAAAACCTAAAACAACTAGGCTC | 58.794 | 40.000 | 0.00 | 0.00 | 39.78 | 4.70 |
7375 | 12181 | 5.889289 | ACAAAACCTAAAACAACTAGGCTCA | 59.111 | 36.000 | 0.00 | 0.00 | 39.78 | 4.26 |
7376 | 12182 | 6.183360 | ACAAAACCTAAAACAACTAGGCTCAC | 60.183 | 38.462 | 0.00 | 0.00 | 39.78 | 3.51 |
7377 | 12183 | 4.017177 | ACCTAAAACAACTAGGCTCACC | 57.983 | 45.455 | 0.00 | 0.00 | 39.78 | 4.02 |
7387 | 12193 | 4.225497 | GGCTCACCTATGTGCACC | 57.775 | 61.111 | 15.69 | 0.00 | 45.29 | 5.01 |
7388 | 12194 | 1.299648 | GGCTCACCTATGTGCACCA | 59.700 | 57.895 | 15.69 | 2.61 | 45.29 | 4.17 |
7389 | 12195 | 0.322456 | GGCTCACCTATGTGCACCAA | 60.322 | 55.000 | 15.69 | 0.65 | 45.29 | 3.67 |
7390 | 12196 | 0.804989 | GCTCACCTATGTGCACCAAC | 59.195 | 55.000 | 15.69 | 0.00 | 43.41 | 3.77 |
7391 | 12197 | 1.881925 | GCTCACCTATGTGCACCAACA | 60.882 | 52.381 | 15.69 | 0.00 | 43.41 | 3.33 |
7392 | 12198 | 2.503331 | CTCACCTATGTGCACCAACAA | 58.497 | 47.619 | 15.69 | 0.00 | 42.46 | 2.83 |
7393 | 12199 | 2.226330 | TCACCTATGTGCACCAACAAC | 58.774 | 47.619 | 15.69 | 0.00 | 42.46 | 3.32 |
7394 | 12200 | 2.158682 | TCACCTATGTGCACCAACAACT | 60.159 | 45.455 | 15.69 | 0.00 | 42.46 | 3.16 |
7395 | 12201 | 2.622942 | CACCTATGTGCACCAACAACTT | 59.377 | 45.455 | 15.69 | 0.00 | 35.31 | 2.66 |
7396 | 12202 | 3.818210 | CACCTATGTGCACCAACAACTTA | 59.182 | 43.478 | 15.69 | 0.00 | 35.31 | 2.24 |
7397 | 12203 | 4.458989 | CACCTATGTGCACCAACAACTTAT | 59.541 | 41.667 | 15.69 | 0.00 | 35.31 | 1.73 |
7398 | 12204 | 4.458989 | ACCTATGTGCACCAACAACTTATG | 59.541 | 41.667 | 15.69 | 0.00 | 32.81 | 1.90 |
7399 | 12205 | 2.791383 | TGTGCACCAACAACTTATGC | 57.209 | 45.000 | 15.69 | 0.00 | 36.81 | 3.14 |
7400 | 12206 | 2.027385 | TGTGCACCAACAACTTATGCA | 58.973 | 42.857 | 15.69 | 0.00 | 43.70 | 3.96 |
7402 | 12208 | 3.808466 | TGCACCAACAACTTATGCAAA | 57.192 | 38.095 | 0.00 | 0.00 | 43.00 | 3.68 |
7403 | 12209 | 3.715495 | TGCACCAACAACTTATGCAAAG | 58.285 | 40.909 | 0.00 | 0.00 | 43.00 | 2.77 |
7404 | 12210 | 2.476241 | GCACCAACAACTTATGCAAAGC | 59.524 | 45.455 | 0.00 | 0.00 | 36.30 | 3.51 |
7405 | 12211 | 3.715495 | CACCAACAACTTATGCAAAGCA | 58.285 | 40.909 | 0.00 | 0.00 | 44.86 | 3.91 |
7406 | 12212 | 4.118410 | CACCAACAACTTATGCAAAGCAA | 58.882 | 39.130 | 0.00 | 0.00 | 43.62 | 3.91 |
7407 | 12213 | 4.209703 | CACCAACAACTTATGCAAAGCAAG | 59.790 | 41.667 | 0.00 | 0.00 | 43.62 | 4.01 |
7408 | 12214 | 4.099266 | ACCAACAACTTATGCAAAGCAAGA | 59.901 | 37.500 | 0.00 | 0.00 | 43.62 | 3.02 |
7409 | 12215 | 5.221501 | ACCAACAACTTATGCAAAGCAAGAT | 60.222 | 36.000 | 0.00 | 0.00 | 43.62 | 2.40 |
7410 | 12216 | 6.015519 | ACCAACAACTTATGCAAAGCAAGATA | 60.016 | 34.615 | 0.00 | 0.00 | 43.62 | 1.98 |
7411 | 12217 | 6.867816 | CCAACAACTTATGCAAAGCAAGATAA | 59.132 | 34.615 | 0.00 | 0.00 | 43.62 | 1.75 |
7412 | 12218 | 7.062605 | CCAACAACTTATGCAAAGCAAGATAAG | 59.937 | 37.037 | 0.00 | 8.50 | 43.62 | 1.73 |
7413 | 12219 | 7.219484 | ACAACTTATGCAAAGCAAGATAAGT | 57.781 | 32.000 | 9.48 | 9.48 | 43.62 | 2.24 |
7414 | 12220 | 8.335532 | ACAACTTATGCAAAGCAAGATAAGTA | 57.664 | 30.769 | 13.63 | 0.00 | 43.62 | 2.24 |
7415 | 12221 | 8.792633 | ACAACTTATGCAAAGCAAGATAAGTAA | 58.207 | 29.630 | 13.63 | 0.00 | 43.62 | 2.24 |
7416 | 12222 | 9.065871 | CAACTTATGCAAAGCAAGATAAGTAAC | 57.934 | 33.333 | 13.63 | 0.00 | 43.62 | 2.50 |
7417 | 12223 | 8.567285 | ACTTATGCAAAGCAAGATAAGTAACT | 57.433 | 30.769 | 12.30 | 0.00 | 43.62 | 2.24 |
7418 | 12224 | 9.667107 | ACTTATGCAAAGCAAGATAAGTAACTA | 57.333 | 29.630 | 12.30 | 0.00 | 43.62 | 2.24 |
7421 | 12227 | 7.921786 | TGCAAAGCAAGATAAGTAACTATGT | 57.078 | 32.000 | 0.00 | 0.00 | 34.76 | 2.29 |
7422 | 12228 | 7.751732 | TGCAAAGCAAGATAAGTAACTATGTG | 58.248 | 34.615 | 0.00 | 0.00 | 34.76 | 3.21 |
7423 | 12229 | 7.606073 | TGCAAAGCAAGATAAGTAACTATGTGA | 59.394 | 33.333 | 0.00 | 0.00 | 34.76 | 3.58 |
7424 | 12230 | 8.616076 | GCAAAGCAAGATAAGTAACTATGTGAT | 58.384 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
7427 | 12233 | 9.482627 | AAGCAAGATAAGTAACTATGTGATAGC | 57.517 | 33.333 | 0.00 | 0.00 | 36.30 | 2.97 |
7428 | 12234 | 8.642432 | AGCAAGATAAGTAACTATGTGATAGCA | 58.358 | 33.333 | 0.00 | 0.00 | 36.30 | 3.49 |
7429 | 12235 | 9.261180 | GCAAGATAAGTAACTATGTGATAGCAA | 57.739 | 33.333 | 0.00 | 0.00 | 36.30 | 3.91 |
7459 | 12265 | 9.797642 | ATATGACAAAGAACAATATGGCTATCA | 57.202 | 29.630 | 0.00 | 0.00 | 0.00 | 2.15 |
7460 | 12266 | 7.320443 | TGACAAAGAACAATATGGCTATCAC | 57.680 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
7461 | 12267 | 6.883756 | TGACAAAGAACAATATGGCTATCACA | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
7462 | 12268 | 7.392953 | TGACAAAGAACAATATGGCTATCACAA | 59.607 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
7463 | 12269 | 8.121305 | ACAAAGAACAATATGGCTATCACAAA | 57.879 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
7464 | 12270 | 8.246180 | ACAAAGAACAATATGGCTATCACAAAG | 58.754 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
7465 | 12271 | 7.944729 | AAGAACAATATGGCTATCACAAAGT | 57.055 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
7466 | 12272 | 9.461312 | AAAGAACAATATGGCTATCACAAAGTA | 57.539 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
7467 | 12273 | 9.461312 | AAGAACAATATGGCTATCACAAAGTAA | 57.539 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
7468 | 12274 | 9.461312 | AGAACAATATGGCTATCACAAAGTAAA | 57.539 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
7469 | 12275 | 9.722056 | GAACAATATGGCTATCACAAAGTAAAG | 57.278 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
7470 | 12276 | 8.807948 | ACAATATGGCTATCACAAAGTAAAGT | 57.192 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
7471 | 12277 | 8.677300 | ACAATATGGCTATCACAAAGTAAAGTG | 58.323 | 33.333 | 0.00 | 0.00 | 37.10 | 3.16 |
7472 | 12278 | 5.567138 | ATGGCTATCACAAAGTAAAGTGC | 57.433 | 39.130 | 0.00 | 0.00 | 35.76 | 4.40 |
7473 | 12279 | 4.393834 | TGGCTATCACAAAGTAAAGTGCA | 58.606 | 39.130 | 0.00 | 0.00 | 35.76 | 4.57 |
7474 | 12280 | 5.009631 | TGGCTATCACAAAGTAAAGTGCAT | 58.990 | 37.500 | 0.00 | 0.00 | 35.76 | 3.96 |
7475 | 12281 | 6.176896 | TGGCTATCACAAAGTAAAGTGCATA | 58.823 | 36.000 | 0.00 | 0.00 | 35.76 | 3.14 |
7476 | 12282 | 6.657117 | TGGCTATCACAAAGTAAAGTGCATAA | 59.343 | 34.615 | 0.00 | 0.00 | 35.76 | 1.90 |
7477 | 12283 | 7.148255 | TGGCTATCACAAAGTAAAGTGCATAAG | 60.148 | 37.037 | 0.00 | 0.00 | 35.76 | 1.73 |
7478 | 12284 | 7.148239 | GGCTATCACAAAGTAAAGTGCATAAGT | 60.148 | 37.037 | 0.00 | 0.00 | 35.76 | 2.24 |
7479 | 12285 | 8.879759 | GCTATCACAAAGTAAAGTGCATAAGTA | 58.120 | 33.333 | 0.00 | 0.00 | 35.76 | 2.24 |
7483 | 12289 | 8.564574 | TCACAAAGTAAAGTGCATAAGTAAAGG | 58.435 | 33.333 | 0.00 | 0.00 | 35.76 | 3.11 |
7484 | 12290 | 7.807907 | CACAAAGTAAAGTGCATAAGTAAAGGG | 59.192 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
7485 | 12291 | 6.510879 | AAGTAAAGTGCATAAGTAAAGGGC | 57.489 | 37.500 | 0.00 | 0.00 | 0.00 | 5.19 |
7486 | 12292 | 5.816682 | AGTAAAGTGCATAAGTAAAGGGCT | 58.183 | 37.500 | 0.00 | 0.00 | 0.00 | 5.19 |
7487 | 12293 | 5.880887 | AGTAAAGTGCATAAGTAAAGGGCTC | 59.119 | 40.000 | 0.00 | 0.00 | 0.00 | 4.70 |
7488 | 12294 | 2.906354 | AGTGCATAAGTAAAGGGCTCG | 58.094 | 47.619 | 0.00 | 0.00 | 0.00 | 5.03 |
7489 | 12295 | 1.940613 | GTGCATAAGTAAAGGGCTCGG | 59.059 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
7490 | 12296 | 1.134220 | TGCATAAGTAAAGGGCTCGGG | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 5.14 |
7491 | 12297 | 1.134189 | GCATAAGTAAAGGGCTCGGGT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
7492 | 12298 | 2.682858 | GCATAAGTAAAGGGCTCGGGTT | 60.683 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
7493 | 12299 | 3.203716 | CATAAGTAAAGGGCTCGGGTTC | 58.796 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
7494 | 12300 | 0.036671 | AAGTAAAGGGCTCGGGTTCG | 60.037 | 55.000 | 0.00 | 0.00 | 37.82 | 3.95 |
7495 | 12301 | 2.104859 | GTAAAGGGCTCGGGTTCGC | 61.105 | 63.158 | 0.00 | 0.00 | 36.13 | 4.70 |
7496 | 12302 | 2.288025 | TAAAGGGCTCGGGTTCGCT | 61.288 | 57.895 | 0.00 | 0.00 | 36.13 | 4.93 |
7497 | 12303 | 2.234913 | TAAAGGGCTCGGGTTCGCTC | 62.235 | 60.000 | 0.00 | 0.00 | 36.13 | 5.03 |
7502 | 12308 | 3.136123 | CTCGGGTTCGCTCGGGTA | 61.136 | 66.667 | 0.00 | 0.00 | 42.36 | 3.69 |
7503 | 12309 | 2.676121 | TCGGGTTCGCTCGGGTAA | 60.676 | 61.111 | 0.00 | 0.00 | 42.36 | 2.85 |
7504 | 12310 | 2.202703 | CGGGTTCGCTCGGGTAAG | 60.203 | 66.667 | 0.00 | 0.00 | 37.46 | 2.34 |
7505 | 12311 | 2.703798 | CGGGTTCGCTCGGGTAAGA | 61.704 | 63.158 | 0.00 | 0.00 | 37.46 | 2.10 |
7506 | 12312 | 1.141234 | GGGTTCGCTCGGGTAAGAG | 59.859 | 63.158 | 0.00 | 0.00 | 41.03 | 2.85 |
7507 | 12313 | 1.318158 | GGGTTCGCTCGGGTAAGAGA | 61.318 | 60.000 | 0.00 | 0.00 | 40.57 | 3.10 |
7508 | 12314 | 0.745468 | GGTTCGCTCGGGTAAGAGAT | 59.255 | 55.000 | 0.00 | 0.00 | 40.57 | 2.75 |
7509 | 12315 | 1.952296 | GGTTCGCTCGGGTAAGAGATA | 59.048 | 52.381 | 0.00 | 0.00 | 40.57 | 1.98 |
7510 | 12316 | 2.360165 | GGTTCGCTCGGGTAAGAGATAA | 59.640 | 50.000 | 0.00 | 0.00 | 40.57 | 1.75 |
7511 | 12317 | 3.370276 | GTTCGCTCGGGTAAGAGATAAC | 58.630 | 50.000 | 0.00 | 0.00 | 40.57 | 1.89 |
7512 | 12318 | 1.952296 | TCGCTCGGGTAAGAGATAACC | 59.048 | 52.381 | 0.00 | 0.00 | 40.57 | 2.85 |
7517 | 12323 | 2.816204 | GGGTAAGAGATAACCGAGGC | 57.184 | 55.000 | 0.00 | 0.00 | 36.57 | 4.70 |
7518 | 12324 | 2.037144 | GGGTAAGAGATAACCGAGGCA | 58.963 | 52.381 | 0.00 | 0.00 | 36.57 | 4.75 |
7519 | 12325 | 2.223994 | GGGTAAGAGATAACCGAGGCAC | 60.224 | 54.545 | 0.00 | 0.00 | 36.57 | 5.01 |
7520 | 12326 | 2.543238 | GGTAAGAGATAACCGAGGCACG | 60.543 | 54.545 | 0.00 | 0.00 | 42.18 | 5.34 |
7521 | 12327 | 0.179108 | AAGAGATAACCGAGGCACGC | 60.179 | 55.000 | 0.00 | 0.00 | 41.07 | 5.34 |
7539 | 12345 | 4.968197 | GGAGACGGCGATGTATCC | 57.032 | 61.111 | 16.62 | 3.42 | 42.45 | 2.59 |
7540 | 12346 | 1.289380 | GGAGACGGCGATGTATCCC | 59.711 | 63.158 | 16.62 | 0.00 | 43.01 | 3.85 |
7541 | 12347 | 1.081376 | GAGACGGCGATGTATCCCG | 60.081 | 63.158 | 16.62 | 15.52 | 42.46 | 5.14 |
7542 | 12348 | 1.512996 | GAGACGGCGATGTATCCCGA | 61.513 | 60.000 | 16.62 | 0.00 | 40.63 | 5.14 |
7543 | 12349 | 1.105167 | AGACGGCGATGTATCCCGAA | 61.105 | 55.000 | 16.62 | 0.00 | 40.63 | 4.30 |
7544 | 12350 | 0.663568 | GACGGCGATGTATCCCGAAG | 60.664 | 60.000 | 16.62 | 0.64 | 40.63 | 3.79 |
7545 | 12351 | 1.362717 | CGGCGATGTATCCCGAAGT | 59.637 | 57.895 | 0.00 | 0.00 | 40.63 | 3.01 |
7546 | 12352 | 0.249322 | CGGCGATGTATCCCGAAGTT | 60.249 | 55.000 | 0.00 | 0.00 | 40.63 | 2.66 |
7547 | 12353 | 1.499049 | GGCGATGTATCCCGAAGTTC | 58.501 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
7548 | 12354 | 1.202486 | GGCGATGTATCCCGAAGTTCA | 60.202 | 52.381 | 3.32 | 0.00 | 0.00 | 3.18 |
7549 | 12355 | 1.859080 | GCGATGTATCCCGAAGTTCAC | 59.141 | 52.381 | 3.32 | 0.00 | 0.00 | 3.18 |
7550 | 12356 | 2.737359 | GCGATGTATCCCGAAGTTCACA | 60.737 | 50.000 | 3.32 | 0.00 | 0.00 | 3.58 |
7551 | 12357 | 2.858344 | CGATGTATCCCGAAGTTCACAC | 59.142 | 50.000 | 3.32 | 0.00 | 0.00 | 3.82 |
7552 | 12358 | 2.754946 | TGTATCCCGAAGTTCACACC | 57.245 | 50.000 | 3.32 | 0.00 | 0.00 | 4.16 |
7553 | 12359 | 1.276989 | TGTATCCCGAAGTTCACACCC | 59.723 | 52.381 | 3.32 | 0.00 | 0.00 | 4.61 |
7554 | 12360 | 1.553704 | GTATCCCGAAGTTCACACCCT | 59.446 | 52.381 | 3.32 | 0.00 | 0.00 | 4.34 |
7555 | 12361 | 1.064825 | ATCCCGAAGTTCACACCCTT | 58.935 | 50.000 | 3.32 | 0.00 | 0.00 | 3.95 |
7556 | 12362 | 0.107831 | TCCCGAAGTTCACACCCTTG | 59.892 | 55.000 | 3.32 | 0.00 | 0.00 | 3.61 |
7557 | 12363 | 1.515521 | CCCGAAGTTCACACCCTTGC | 61.516 | 60.000 | 3.32 | 0.00 | 0.00 | 4.01 |
7558 | 12364 | 1.569493 | CGAAGTTCACACCCTTGCG | 59.431 | 57.895 | 3.32 | 0.00 | 0.00 | 4.85 |
7559 | 12365 | 1.841663 | CGAAGTTCACACCCTTGCGG | 61.842 | 60.000 | 3.32 | 0.00 | 37.81 | 5.69 |
7560 | 12366 | 0.534203 | GAAGTTCACACCCTTGCGGA | 60.534 | 55.000 | 0.00 | 0.00 | 34.64 | 5.54 |
7561 | 12367 | 0.110486 | AAGTTCACACCCTTGCGGAT | 59.890 | 50.000 | 0.00 | 0.00 | 34.64 | 4.18 |
7562 | 12368 | 0.606401 | AGTTCACACCCTTGCGGATG | 60.606 | 55.000 | 0.00 | 0.00 | 34.64 | 3.51 |
7563 | 12369 | 1.971167 | TTCACACCCTTGCGGATGC | 60.971 | 57.895 | 0.00 | 0.00 | 43.20 | 3.91 |
7564 | 12370 | 2.360350 | CACACCCTTGCGGATGCT | 60.360 | 61.111 | 0.00 | 0.00 | 43.34 | 3.79 |
7565 | 12371 | 1.078497 | CACACCCTTGCGGATGCTA | 60.078 | 57.895 | 0.00 | 0.00 | 43.34 | 3.49 |
7566 | 12372 | 0.676466 | CACACCCTTGCGGATGCTAA | 60.676 | 55.000 | 0.00 | 0.00 | 43.34 | 3.09 |
7567 | 12373 | 0.255890 | ACACCCTTGCGGATGCTAAT | 59.744 | 50.000 | 0.00 | 0.00 | 43.34 | 1.73 |
7568 | 12374 | 0.947244 | CACCCTTGCGGATGCTAATC | 59.053 | 55.000 | 0.00 | 0.00 | 43.34 | 1.75 |
7569 | 12375 | 0.839946 | ACCCTTGCGGATGCTAATCT | 59.160 | 50.000 | 0.00 | 0.00 | 43.34 | 2.40 |
7570 | 12376 | 1.202698 | ACCCTTGCGGATGCTAATCTC | 60.203 | 52.381 | 0.00 | 0.00 | 43.34 | 2.75 |
7571 | 12377 | 1.517242 | CCTTGCGGATGCTAATCTCC | 58.483 | 55.000 | 0.00 | 0.00 | 43.34 | 3.71 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
32 | 33 | 7.092079 | GGTACAAACACCATGTAATTTTACCC | 58.908 | 38.462 | 0.00 | 0.00 | 38.55 | 3.69 |
100 | 102 | 4.288670 | ACACACCTCGATAACATCTACG | 57.711 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
106 | 108 | 6.539464 | AGTTGTTAAAACACACCTCGATAACA | 59.461 | 34.615 | 0.00 | 0.00 | 38.92 | 2.41 |
136 | 138 | 3.670625 | TCACGGTAACTTTTGATCCCAG | 58.329 | 45.455 | 0.00 | 0.00 | 0.00 | 4.45 |
194 | 196 | 8.677148 | ACTTGGCACGAAAATAGTATGATAAT | 57.323 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
202 | 204 | 4.385825 | TCTTGACTTGGCACGAAAATAGT | 58.614 | 39.130 | 0.00 | 0.00 | 0.00 | 2.12 |
233 | 235 | 5.010516 | CACAATGATACCTTTGACCCAAACA | 59.989 | 40.000 | 0.00 | 0.00 | 33.27 | 2.83 |
234 | 236 | 5.010617 | ACACAATGATACCTTTGACCCAAAC | 59.989 | 40.000 | 0.00 | 0.00 | 33.27 | 2.93 |
236 | 238 | 4.735369 | ACACAATGATACCTTTGACCCAA | 58.265 | 39.130 | 0.00 | 0.00 | 33.27 | 4.12 |
307 | 309 | 3.530265 | TGCCGTCGGTAATTTCTGTAT | 57.470 | 42.857 | 13.94 | 0.00 | 0.00 | 2.29 |
322 | 324 | 3.305398 | TTTGTTGTTGAAACTTGCCGT | 57.695 | 38.095 | 0.00 | 0.00 | 0.00 | 5.68 |
324 | 326 | 6.841119 | AGAATTTTTGTTGTTGAAACTTGCC | 58.159 | 32.000 | 0.00 | 0.00 | 0.00 | 4.52 |
371 | 375 | 9.888878 | GTTCCAACTAAACTTTTACTTGGATAC | 57.111 | 33.333 | 16.93 | 14.53 | 41.21 | 2.24 |
372 | 376 | 9.629878 | TGTTCCAACTAAACTTTTACTTGGATA | 57.370 | 29.630 | 16.93 | 10.60 | 41.21 | 2.59 |
373 | 377 | 8.528044 | TGTTCCAACTAAACTTTTACTTGGAT | 57.472 | 30.769 | 16.93 | 0.00 | 41.21 | 3.41 |
374 | 378 | 7.941431 | TGTTCCAACTAAACTTTTACTTGGA | 57.059 | 32.000 | 14.20 | 14.20 | 40.57 | 3.53 |
375 | 379 | 8.989653 | TTTGTTCCAACTAAACTTTTACTTGG | 57.010 | 30.769 | 11.24 | 11.24 | 37.66 | 3.61 |
383 | 387 | 9.908152 | GCATAAGTATTTGTTCCAACTAAACTT | 57.092 | 29.630 | 13.15 | 13.15 | 33.99 | 2.66 |
384 | 388 | 9.073475 | TGCATAAGTATTTGTTCCAACTAAACT | 57.927 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
385 | 389 | 9.124807 | GTGCATAAGTATTTGTTCCAACTAAAC | 57.875 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
386 | 390 | 9.073475 | AGTGCATAAGTATTTGTTCCAACTAAA | 57.927 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
404 | 408 | 1.207089 | ACTCCGCTAGCAAGTGCATAA | 59.793 | 47.619 | 16.45 | 0.00 | 45.16 | 1.90 |
408 | 412 | 1.639298 | CCAACTCCGCTAGCAAGTGC | 61.639 | 60.000 | 16.45 | 0.00 | 42.49 | 4.40 |
455 | 459 | 6.137415 | GTCATAGAGGAATCGAACTCTTACG | 58.863 | 44.000 | 18.68 | 10.43 | 41.05 | 3.18 |
457 | 461 | 7.825331 | ATGTCATAGAGGAATCGAACTCTTA | 57.175 | 36.000 | 18.68 | 8.79 | 41.05 | 2.10 |
481 | 485 | 4.683781 | GTGCCAAGTCAAAAATTATGCGAA | 59.316 | 37.500 | 0.00 | 0.00 | 0.00 | 4.70 |
482 | 486 | 4.233789 | GTGCCAAGTCAAAAATTATGCGA | 58.766 | 39.130 | 0.00 | 0.00 | 0.00 | 5.10 |
515 | 519 | 7.501225 | TCCTAATTAGTACTGCCATTTAAAGCC | 59.499 | 37.037 | 11.50 | 0.00 | 0.00 | 4.35 |
566 | 570 | 6.772716 | ACCATTCATTAGCACGATTTAATCCT | 59.227 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
567 | 571 | 6.970484 | ACCATTCATTAGCACGATTTAATCC | 58.030 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
595 | 605 | 2.491675 | AATGGACCCGAGTTTTCCTC | 57.508 | 50.000 | 0.00 | 0.00 | 36.80 | 3.71 |
596 | 606 | 3.585732 | TCTTAATGGACCCGAGTTTTCCT | 59.414 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
597 | 607 | 3.939592 | CTCTTAATGGACCCGAGTTTTCC | 59.060 | 47.826 | 0.00 | 0.00 | 0.00 | 3.13 |
598 | 608 | 4.828829 | TCTCTTAATGGACCCGAGTTTTC | 58.171 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
599 | 609 | 4.903045 | TCTCTTAATGGACCCGAGTTTT | 57.097 | 40.909 | 0.00 | 0.00 | 0.00 | 2.43 |
600 | 610 | 4.469945 | TGATCTCTTAATGGACCCGAGTTT | 59.530 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
601 | 611 | 4.030913 | TGATCTCTTAATGGACCCGAGTT | 58.969 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
602 | 612 | 3.643237 | TGATCTCTTAATGGACCCGAGT | 58.357 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
603 | 613 | 4.881019 | ATGATCTCTTAATGGACCCGAG | 57.119 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
604 | 614 | 6.553476 | TCTTAATGATCTCTTAATGGACCCGA | 59.447 | 38.462 | 0.00 | 0.00 | 0.00 | 5.14 |
605 | 615 | 6.759272 | TCTTAATGATCTCTTAATGGACCCG | 58.241 | 40.000 | 0.00 | 0.00 | 0.00 | 5.28 |
606 | 616 | 9.660180 | GTATCTTAATGATCTCTTAATGGACCC | 57.340 | 37.037 | 0.00 | 0.00 | 36.65 | 4.46 |
607 | 617 | 9.360093 | CGTATCTTAATGATCTCTTAATGGACC | 57.640 | 37.037 | 0.00 | 0.00 | 36.65 | 4.46 |
608 | 618 | 9.360093 | CCGTATCTTAATGATCTCTTAATGGAC | 57.640 | 37.037 | 0.00 | 0.00 | 36.65 | 4.02 |
609 | 619 | 8.531982 | CCCGTATCTTAATGATCTCTTAATGGA | 58.468 | 37.037 | 0.00 | 0.00 | 36.65 | 3.41 |
646 | 656 | 3.644265 | TCTCCTGGGCGTTAATTAGCATA | 59.356 | 43.478 | 0.06 | 0.00 | 34.54 | 3.14 |
658 | 668 | 0.814010 | CCGGTTTATTCTCCTGGGCG | 60.814 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
749 | 759 | 0.179004 | TGAAGCCGCCAGAAAAAGGA | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
821 | 836 | 4.994852 | TCCTTCACTGAATACAAACGGAAG | 59.005 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
834 | 849 | 0.250234 | CGGGCTGAATCCTTCACTGA | 59.750 | 55.000 | 0.00 | 0.00 | 35.46 | 3.41 |
852 | 868 | 1.156736 | AGATTTTTGTCCGGCTCACG | 58.843 | 50.000 | 0.00 | 0.00 | 43.80 | 4.35 |
975 | 991 | 2.625282 | AGCTACAGTGTACCTCCCTT | 57.375 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1125 | 1141 | 3.584403 | GGGAGGCCCATGGATCCC | 61.584 | 72.222 | 25.19 | 25.19 | 44.65 | 3.85 |
1261 | 1277 | 9.698309 | CTTAAACTAATCCGAGTGTGATATGAT | 57.302 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
1262 | 1278 | 7.652105 | GCTTAAACTAATCCGAGTGTGATATGA | 59.348 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
1263 | 1279 | 7.438160 | TGCTTAAACTAATCCGAGTGTGATATG | 59.562 | 37.037 | 0.00 | 0.00 | 0.00 | 1.78 |
1586 | 1602 | 2.729491 | CTCTGCGTCACGTTGCGA | 60.729 | 61.111 | 12.00 | 5.86 | 0.00 | 5.10 |
1697 | 1716 | 4.589216 | ACACGTAGCACTAAAGTAACCA | 57.411 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
1747 | 1770 | 2.093711 | ACAAGGCGCAAAAATATTCCCC | 60.094 | 45.455 | 10.83 | 0.00 | 0.00 | 4.81 |
1748 | 1771 | 3.245518 | ACAAGGCGCAAAAATATTCCC | 57.754 | 42.857 | 10.83 | 0.00 | 0.00 | 3.97 |
1750 | 1773 | 9.296400 | TCTAAAATACAAGGCGCAAAAATATTC | 57.704 | 29.630 | 10.83 | 0.00 | 0.00 | 1.75 |
1752 | 1775 | 9.816354 | ATTCTAAAATACAAGGCGCAAAAATAT | 57.184 | 25.926 | 10.83 | 0.00 | 0.00 | 1.28 |
1753 | 1776 | 9.081997 | CATTCTAAAATACAAGGCGCAAAAATA | 57.918 | 29.630 | 10.83 | 0.00 | 0.00 | 1.40 |
1754 | 1777 | 7.064490 | CCATTCTAAAATACAAGGCGCAAAAAT | 59.936 | 33.333 | 10.83 | 0.00 | 0.00 | 1.82 |
1755 | 1778 | 6.367422 | CCATTCTAAAATACAAGGCGCAAAAA | 59.633 | 34.615 | 10.83 | 0.00 | 0.00 | 1.94 |
1756 | 1779 | 5.866633 | CCATTCTAAAATACAAGGCGCAAAA | 59.133 | 36.000 | 10.83 | 0.00 | 0.00 | 2.44 |
1757 | 1780 | 5.406649 | CCATTCTAAAATACAAGGCGCAAA | 58.593 | 37.500 | 10.83 | 0.00 | 0.00 | 3.68 |
1758 | 1781 | 4.142271 | CCCATTCTAAAATACAAGGCGCAA | 60.142 | 41.667 | 10.83 | 0.00 | 0.00 | 4.85 |
1759 | 1782 | 3.380004 | CCCATTCTAAAATACAAGGCGCA | 59.620 | 43.478 | 10.83 | 0.00 | 0.00 | 6.09 |
1760 | 1783 | 3.243401 | CCCCATTCTAAAATACAAGGCGC | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 6.53 |
2291 | 2437 | 4.133078 | TGTAAAATAACGGTTCGGGTGTT | 58.867 | 39.130 | 0.00 | 0.00 | 0.00 | 3.32 |
2329 | 2476 | 6.457663 | CGCGGATGAATTACCTAAAACATCAA | 60.458 | 38.462 | 0.00 | 0.00 | 35.54 | 2.57 |
3270 | 3420 | 0.336737 | ATCCTCCTTCTCACCCTCGT | 59.663 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
3447 | 3597 | 3.075882 | TGATTGGACCAAAGAAGGTGGAT | 59.924 | 43.478 | 11.82 | 0.00 | 43.38 | 3.41 |
3596 | 3765 | 1.270199 | CCTCATGAGCTGGATTCGAGG | 60.270 | 57.143 | 17.76 | 0.00 | 33.19 | 4.63 |
3634 | 3803 | 5.659971 | ACACGATAGGTAGGTAGATTGGTTT | 59.340 | 40.000 | 0.00 | 0.00 | 43.77 | 3.27 |
3643 | 3812 | 5.711506 | TCTCAAACAACACGATAGGTAGGTA | 59.288 | 40.000 | 0.00 | 0.00 | 43.77 | 3.08 |
3984 | 4182 | 7.924103 | TTCTTTTATTCTTTCCTTGCGAAAC | 57.076 | 32.000 | 0.00 | 0.00 | 35.49 | 2.78 |
4121 | 4391 | 4.698304 | TCAGTCCACAACGGGATTTATTTC | 59.302 | 41.667 | 0.00 | 0.00 | 39.62 | 2.17 |
4130 | 4400 | 8.474831 | TGATATATATAATCAGTCCACAACGGG | 58.525 | 37.037 | 0.00 | 0.00 | 34.36 | 5.28 |
4196 | 4471 | 3.780850 | GGTGACCCCATATATTCCTAGGG | 59.219 | 52.174 | 9.46 | 0.00 | 40.58 | 3.53 |
4314 | 4632 | 1.130561 | TGTCAGCTCTCACGTACATCG | 59.869 | 52.381 | 0.00 | 0.00 | 46.00 | 3.84 |
4459 | 4795 | 4.286032 | TGACCTTCCACTATACAAAGCACT | 59.714 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
4465 | 4809 | 2.563620 | TGCGTGACCTTCCACTATACAA | 59.436 | 45.455 | 0.00 | 0.00 | 35.02 | 2.41 |
4471 | 4815 | 2.029073 | CGTGCGTGACCTTCCACT | 59.971 | 61.111 | 0.00 | 0.00 | 35.02 | 4.00 |
4529 | 4875 | 8.189119 | ACTATTTGGATTTGTTCTGCCTTAAA | 57.811 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
4598 | 4977 | 4.957954 | ACCATGCATTTGGATGTCTGTATT | 59.042 | 37.500 | 13.35 | 0.00 | 41.52 | 1.89 |
4647 | 5027 | 2.229792 | TGTTTCTGGCAGTGAACCATC | 58.770 | 47.619 | 23.46 | 8.45 | 36.36 | 3.51 |
4743 | 5123 | 4.431416 | AAGGTGTGTGGTCATCAACTTA | 57.569 | 40.909 | 7.31 | 0.00 | 37.35 | 2.24 |
4882 | 5262 | 4.083537 | CGCACCAGCTTGTAATTCTTTGTA | 60.084 | 41.667 | 0.00 | 0.00 | 39.10 | 2.41 |
4954 | 5334 | 2.134789 | ATGTGATCAGTCCAAAGGCC | 57.865 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4989 | 5369 | 3.200483 | TCTTCCATGATGATCACTTGCG | 58.800 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
5052 | 5432 | 2.240493 | AACAAACTCTCTCACACCCG | 57.760 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
5060 | 5440 | 3.467803 | CAACGGGAGAAACAAACTCTCT | 58.532 | 45.455 | 0.00 | 0.00 | 39.48 | 3.10 |
5091 | 5471 | 5.703978 | ACTAGCACAAATACACAAATGCA | 57.296 | 34.783 | 0.00 | 0.00 | 35.51 | 3.96 |
5105 | 5485 | 9.515226 | TGATCATGTGTATATAGTACTAGCACA | 57.485 | 33.333 | 22.66 | 22.66 | 39.25 | 4.57 |
5114 | 5494 | 9.249457 | CGTTCTGTTTGATCATGTGTATATAGT | 57.751 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
5115 | 5495 | 8.217115 | GCGTTCTGTTTGATCATGTGTATATAG | 58.783 | 37.037 | 0.00 | 0.00 | 0.00 | 1.31 |
5116 | 5496 | 7.708752 | TGCGTTCTGTTTGATCATGTGTATATA | 59.291 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
5117 | 5497 | 6.538381 | TGCGTTCTGTTTGATCATGTGTATAT | 59.462 | 34.615 | 0.00 | 0.00 | 0.00 | 0.86 |
5118 | 5498 | 5.872070 | TGCGTTCTGTTTGATCATGTGTATA | 59.128 | 36.000 | 0.00 | 0.00 | 0.00 | 1.47 |
5119 | 5499 | 4.694982 | TGCGTTCTGTTTGATCATGTGTAT | 59.305 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
5120 | 5500 | 4.061596 | TGCGTTCTGTTTGATCATGTGTA | 58.938 | 39.130 | 0.00 | 0.00 | 0.00 | 2.90 |
5121 | 5501 | 2.877786 | TGCGTTCTGTTTGATCATGTGT | 59.122 | 40.909 | 0.00 | 0.00 | 0.00 | 3.72 |
5122 | 5502 | 3.228749 | GTGCGTTCTGTTTGATCATGTG | 58.771 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
5123 | 5503 | 2.096268 | CGTGCGTTCTGTTTGATCATGT | 60.096 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
5124 | 5504 | 2.157474 | TCGTGCGTTCTGTTTGATCATG | 59.843 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
5125 | 5505 | 2.412870 | TCGTGCGTTCTGTTTGATCAT | 58.587 | 42.857 | 0.00 | 0.00 | 0.00 | 2.45 |
5126 | 5506 | 1.792367 | CTCGTGCGTTCTGTTTGATCA | 59.208 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
5127 | 5507 | 1.792949 | ACTCGTGCGTTCTGTTTGATC | 59.207 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
5128 | 5508 | 1.526887 | CACTCGTGCGTTCTGTTTGAT | 59.473 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
5129 | 5509 | 0.927537 | CACTCGTGCGTTCTGTTTGA | 59.072 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
5130 | 5510 | 0.650512 | ACACTCGTGCGTTCTGTTTG | 59.349 | 50.000 | 0.00 | 0.00 | 0.00 | 2.93 |
5131 | 5511 | 1.365699 | AACACTCGTGCGTTCTGTTT | 58.634 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
5132 | 5512 | 1.365699 | AAACACTCGTGCGTTCTGTT | 58.634 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
5133 | 5513 | 1.365699 | AAAACACTCGTGCGTTCTGT | 58.634 | 45.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5134 | 5514 | 2.452006 | AAAAACACTCGTGCGTTCTG | 57.548 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5154 | 5534 | 2.558800 | GGCCAGGGGTCATCCTTAAAAA | 60.559 | 50.000 | 0.00 | 0.00 | 34.31 | 1.94 |
5155 | 5535 | 1.006639 | GGCCAGGGGTCATCCTTAAAA | 59.993 | 52.381 | 0.00 | 0.00 | 34.31 | 1.52 |
5156 | 5536 | 0.629058 | GGCCAGGGGTCATCCTTAAA | 59.371 | 55.000 | 0.00 | 0.00 | 34.31 | 1.52 |
5157 | 5537 | 0.253630 | AGGCCAGGGGTCATCCTTAA | 60.254 | 55.000 | 5.01 | 0.00 | 34.31 | 1.85 |
5158 | 5538 | 0.694444 | GAGGCCAGGGGTCATCCTTA | 60.694 | 60.000 | 5.01 | 0.00 | 34.31 | 2.69 |
5161 | 5541 | 2.367512 | AGAGGCCAGGGGTCATCC | 60.368 | 66.667 | 5.01 | 0.00 | 0.00 | 3.51 |
5171 | 5551 | 0.911045 | TCTTCCAGATGCAGAGGCCA | 60.911 | 55.000 | 5.01 | 0.00 | 40.13 | 5.36 |
5172 | 5552 | 0.473326 | ATCTTCCAGATGCAGAGGCC | 59.527 | 55.000 | 0.00 | 0.00 | 40.13 | 5.19 |
5390 | 5798 | 2.541762 | GCCATCAAGTCTACAGCGAATC | 59.458 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
5418 | 5826 | 4.972591 | GCAAAGCTGGCGAACAAT | 57.027 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
5554 | 7832 | 7.672351 | TTCAAATTGACAAAATGTACACGAC | 57.328 | 32.000 | 0.00 | 0.00 | 0.00 | 4.34 |
5576 | 7854 | 9.665264 | CTAGTGTCTTTGTTCTTTTAACCATTC | 57.335 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
5599 | 7877 | 8.887717 | ACACTTTTAAATCTTATCTGCAGCTAG | 58.112 | 33.333 | 9.47 | 6.04 | 0.00 | 3.42 |
5617 | 7895 | 2.622942 | CCTGCAAGAAGGCACACTTTTA | 59.377 | 45.455 | 0.00 | 0.00 | 40.21 | 1.52 |
5867 | 8516 | 6.433847 | TCTCATTGGAAACCTACAGAGAAA | 57.566 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
5875 | 8529 | 4.501571 | GCGAGCTATCTCATTGGAAACCTA | 60.502 | 45.833 | 0.00 | 0.00 | 39.30 | 3.08 |
5881 | 8535 | 1.001268 | GACGCGAGCTATCTCATTGGA | 60.001 | 52.381 | 15.93 | 0.00 | 39.30 | 3.53 |
6033 | 8762 | 3.210227 | TGCGTCAGGAAAGAATTGTTGA | 58.790 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
6132 | 8886 | 2.165437 | CCATGGGTTAAATGTCAACGGG | 59.835 | 50.000 | 2.85 | 0.00 | 0.00 | 5.28 |
6173 | 8927 | 1.134670 | GGGAGAGTGGTCGAGGAATTG | 60.135 | 57.143 | 0.00 | 0.00 | 0.00 | 2.32 |
6175 | 8929 | 0.688087 | GGGGAGAGTGGTCGAGGAAT | 60.688 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
6177 | 8931 | 2.239439 | AGGGGAGAGTGGTCGAGGA | 61.239 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
6179 | 8933 | 1.000771 | TCAGGGGAGAGTGGTCGAG | 60.001 | 63.158 | 0.00 | 0.00 | 0.00 | 4.04 |
6180 | 8934 | 1.304217 | GTCAGGGGAGAGTGGTCGA | 60.304 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
6181 | 8935 | 2.701780 | CGTCAGGGGAGAGTGGTCG | 61.702 | 68.421 | 0.00 | 0.00 | 0.00 | 4.79 |
6183 | 8937 | 2.997897 | GCGTCAGGGGAGAGTGGT | 60.998 | 66.667 | 0.00 | 0.00 | 0.00 | 4.16 |
6184 | 8938 | 1.043116 | TATGCGTCAGGGGAGAGTGG | 61.043 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6185 | 8939 | 0.824109 | TTATGCGTCAGGGGAGAGTG | 59.176 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
6186 | 8940 | 1.207329 | GTTTATGCGTCAGGGGAGAGT | 59.793 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
6188 | 8942 | 0.174845 | CGTTTATGCGTCAGGGGAGA | 59.825 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
6189 | 8943 | 0.174845 | TCGTTTATGCGTCAGGGGAG | 59.825 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6190 | 8944 | 0.609151 | TTCGTTTATGCGTCAGGGGA | 59.391 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
6192 | 8946 | 1.722011 | AGTTCGTTTATGCGTCAGGG | 58.278 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
6193 | 8947 | 6.764877 | ATATTAGTTCGTTTATGCGTCAGG | 57.235 | 37.500 | 0.00 | 0.00 | 0.00 | 3.86 |
6194 | 8948 | 9.485591 | AAAAATATTAGTTCGTTTATGCGTCAG | 57.514 | 29.630 | 0.00 | 0.00 | 0.00 | 3.51 |
6235 | 8989 | 7.714377 | ACTCATCCTGCAGATTTCTATTAGTTG | 59.286 | 37.037 | 17.39 | 0.00 | 30.59 | 3.16 |
6537 | 9323 | 5.396213 | GGATTATCTGGATGTGATAGCCCTC | 60.396 | 48.000 | 0.00 | 0.00 | 32.41 | 4.30 |
6604 | 9390 | 6.365970 | AGGCTCTCTTTCTTGTATCAAGAA | 57.634 | 37.500 | 17.35 | 17.35 | 34.73 | 2.52 |
6678 | 9464 | 2.351418 | CGCTGCCATTTTTCTGTCGATA | 59.649 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
6681 | 9467 | 0.516877 | TCGCTGCCATTTTTCTGTCG | 59.483 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
6683 | 9469 | 3.347216 | ACTATCGCTGCCATTTTTCTGT | 58.653 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
6714 | 9500 | 5.241662 | AGTTGCATTTTGTAGAGGAGAGAC | 58.758 | 41.667 | 0.00 | 0.00 | 0.00 | 3.36 |
6726 | 9512 | 4.446385 | CACATGTTGGAGAGTTGCATTTTG | 59.554 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
6733 | 9519 | 3.997021 | GGTAGTCACATGTTGGAGAGTTG | 59.003 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
6783 | 9569 | 3.118149 | CCATGACAAGATGATGGAGGACA | 60.118 | 47.826 | 0.00 | 0.00 | 39.29 | 4.02 |
6898 | 10764 | 4.344968 | CCTCCATCCCAAAATAAATGTCCC | 59.655 | 45.833 | 0.00 | 0.00 | 0.00 | 4.46 |
6934 | 10800 | 5.386060 | TCCCAAACACAATACCATACACAA | 58.614 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
6971 | 10837 | 1.076332 | GTGCACCACGGTATTCTCAC | 58.924 | 55.000 | 5.22 | 0.00 | 0.00 | 3.51 |
6972 | 10838 | 0.973632 | AGTGCACCACGGTATTCTCA | 59.026 | 50.000 | 14.63 | 0.00 | 39.64 | 3.27 |
6973 | 10839 | 1.641577 | GAGTGCACCACGGTATTCTC | 58.358 | 55.000 | 14.63 | 0.00 | 39.64 | 2.87 |
6974 | 10840 | 0.108804 | CGAGTGCACCACGGTATTCT | 60.109 | 55.000 | 21.07 | 0.00 | 39.64 | 2.40 |
6975 | 10841 | 1.082117 | CCGAGTGCACCACGGTATTC | 61.082 | 60.000 | 31.46 | 14.44 | 41.47 | 1.75 |
6976 | 10842 | 1.079405 | CCGAGTGCACCACGGTATT | 60.079 | 57.895 | 31.46 | 7.67 | 41.47 | 1.89 |
6977 | 10843 | 2.577059 | CCGAGTGCACCACGGTAT | 59.423 | 61.111 | 31.46 | 8.37 | 41.47 | 2.73 |
6978 | 10844 | 3.687102 | CCCGAGTGCACCACGGTA | 61.687 | 66.667 | 34.35 | 0.00 | 44.34 | 4.02 |
7104 | 11910 | 6.145338 | TGAGGTCAATACGAGTTATTCCTC | 57.855 | 41.667 | 0.00 | 0.00 | 39.54 | 3.71 |
7226 | 12032 | 7.770433 | TCCACGATCTTTCAATGATCAAGTATT | 59.230 | 33.333 | 12.48 | 0.00 | 40.03 | 1.89 |
7227 | 12033 | 7.275183 | TCCACGATCTTTCAATGATCAAGTAT | 58.725 | 34.615 | 12.48 | 0.00 | 40.03 | 2.12 |
7228 | 12034 | 6.639563 | TCCACGATCTTTCAATGATCAAGTA | 58.360 | 36.000 | 12.48 | 0.00 | 40.03 | 2.24 |
7229 | 12035 | 5.491070 | TCCACGATCTTTCAATGATCAAGT | 58.509 | 37.500 | 12.48 | 2.20 | 40.03 | 3.16 |
7230 | 12036 | 6.037940 | ACATCCACGATCTTTCAATGATCAAG | 59.962 | 38.462 | 12.48 | 0.00 | 40.03 | 3.02 |
7231 | 12037 | 5.882000 | ACATCCACGATCTTTCAATGATCAA | 59.118 | 36.000 | 12.48 | 0.00 | 40.03 | 2.57 |
7232 | 12038 | 5.430886 | ACATCCACGATCTTTCAATGATCA | 58.569 | 37.500 | 12.48 | 0.00 | 40.03 | 2.92 |
7233 | 12039 | 5.332883 | CGACATCCACGATCTTTCAATGATC | 60.333 | 44.000 | 3.61 | 3.61 | 37.53 | 2.92 |
7234 | 12040 | 4.509230 | CGACATCCACGATCTTTCAATGAT | 59.491 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
7235 | 12041 | 3.865164 | CGACATCCACGATCTTTCAATGA | 59.135 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
7236 | 12042 | 3.544834 | GCGACATCCACGATCTTTCAATG | 60.545 | 47.826 | 0.00 | 0.00 | 0.00 | 2.82 |
7237 | 12043 | 2.609459 | GCGACATCCACGATCTTTCAAT | 59.391 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
7238 | 12044 | 1.999735 | GCGACATCCACGATCTTTCAA | 59.000 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
7239 | 12045 | 1.640428 | GCGACATCCACGATCTTTCA | 58.360 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
7240 | 12046 | 0.931005 | GGCGACATCCACGATCTTTC | 59.069 | 55.000 | 0.00 | 0.00 | 0.00 | 2.62 |
7241 | 12047 | 0.537188 | AGGCGACATCCACGATCTTT | 59.463 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7242 | 12048 | 0.179100 | CAGGCGACATCCACGATCTT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
7243 | 12049 | 1.439228 | CAGGCGACATCCACGATCT | 59.561 | 57.895 | 0.00 | 0.00 | 0.00 | 2.75 |
7244 | 12050 | 1.592669 | CCAGGCGACATCCACGATC | 60.593 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
7245 | 12051 | 2.501128 | CCAGGCGACATCCACGAT | 59.499 | 61.111 | 0.00 | 0.00 | 0.00 | 3.73 |
7246 | 12052 | 3.770040 | CCCAGGCGACATCCACGA | 61.770 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
7247 | 12053 | 4.838152 | CCCCAGGCGACATCCACG | 62.838 | 72.222 | 0.00 | 0.00 | 0.00 | 4.94 |
7248 | 12054 | 4.489771 | CCCCCAGGCGACATCCAC | 62.490 | 72.222 | 0.00 | 0.00 | 0.00 | 4.02 |
7269 | 12075 | 0.683179 | AAAGCGCCTATTCAACCCCC | 60.683 | 55.000 | 2.29 | 0.00 | 0.00 | 5.40 |
7270 | 12076 | 2.047002 | TAAAGCGCCTATTCAACCCC | 57.953 | 50.000 | 2.29 | 0.00 | 0.00 | 4.95 |
7271 | 12077 | 4.443913 | TTTTAAAGCGCCTATTCAACCC | 57.556 | 40.909 | 2.29 | 0.00 | 0.00 | 4.11 |
7272 | 12078 | 8.642908 | AATTATTTTAAAGCGCCTATTCAACC | 57.357 | 30.769 | 2.29 | 0.00 | 0.00 | 3.77 |
7274 | 12080 | 9.440784 | CGTAATTATTTTAAAGCGCCTATTCAA | 57.559 | 29.630 | 2.29 | 0.00 | 0.00 | 2.69 |
7275 | 12081 | 8.071368 | CCGTAATTATTTTAAAGCGCCTATTCA | 58.929 | 33.333 | 2.29 | 0.00 | 0.00 | 2.57 |
7276 | 12082 | 8.071967 | ACCGTAATTATTTTAAAGCGCCTATTC | 58.928 | 33.333 | 2.29 | 0.00 | 0.00 | 1.75 |
7277 | 12083 | 7.933396 | ACCGTAATTATTTTAAAGCGCCTATT | 58.067 | 30.769 | 2.29 | 0.00 | 0.00 | 1.73 |
7278 | 12084 | 7.500720 | ACCGTAATTATTTTAAAGCGCCTAT | 57.499 | 32.000 | 2.29 | 0.00 | 0.00 | 2.57 |
7279 | 12085 | 6.923928 | ACCGTAATTATTTTAAAGCGCCTA | 57.076 | 33.333 | 2.29 | 0.00 | 0.00 | 3.93 |
7280 | 12086 | 5.823209 | ACCGTAATTATTTTAAAGCGCCT | 57.177 | 34.783 | 2.29 | 0.00 | 0.00 | 5.52 |
7281 | 12087 | 6.874297 | AAACCGTAATTATTTTAAAGCGCC | 57.126 | 33.333 | 2.29 | 0.00 | 0.00 | 6.53 |
7282 | 12088 | 7.305590 | GCCTAAACCGTAATTATTTTAAAGCGC | 60.306 | 37.037 | 0.00 | 0.00 | 0.00 | 5.92 |
7283 | 12089 | 7.911727 | AGCCTAAACCGTAATTATTTTAAAGCG | 59.088 | 33.333 | 0.00 | 0.00 | 0.00 | 4.68 |
7284 | 12090 | 9.577110 | AAGCCTAAACCGTAATTATTTTAAAGC | 57.423 | 29.630 | 0.00 | 1.19 | 0.00 | 3.51 |
7289 | 12095 | 8.578151 | TGTTCAAGCCTAAACCGTAATTATTTT | 58.422 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
7290 | 12096 | 8.113173 | TGTTCAAGCCTAAACCGTAATTATTT | 57.887 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
7291 | 12097 | 7.690952 | TGTTCAAGCCTAAACCGTAATTATT | 57.309 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
7292 | 12098 | 7.690952 | TTGTTCAAGCCTAAACCGTAATTAT | 57.309 | 32.000 | 0.00 | 0.00 | 0.00 | 1.28 |
7293 | 12099 | 7.507733 | TTTGTTCAAGCCTAAACCGTAATTA | 57.492 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
7294 | 12100 | 6.394025 | TTTGTTCAAGCCTAAACCGTAATT | 57.606 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
7295 | 12101 | 6.386654 | CATTTGTTCAAGCCTAAACCGTAAT | 58.613 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
7296 | 12102 | 5.764131 | CATTTGTTCAAGCCTAAACCGTAA | 58.236 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
7297 | 12103 | 4.320641 | GCATTTGTTCAAGCCTAAACCGTA | 60.321 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
7298 | 12104 | 3.552068 | GCATTTGTTCAAGCCTAAACCGT | 60.552 | 43.478 | 0.00 | 0.00 | 0.00 | 4.83 |
7299 | 12105 | 2.986479 | GCATTTGTTCAAGCCTAAACCG | 59.014 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
7300 | 12106 | 2.986479 | CGCATTTGTTCAAGCCTAAACC | 59.014 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
7301 | 12107 | 2.986479 | CCGCATTTGTTCAAGCCTAAAC | 59.014 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
7302 | 12108 | 2.887783 | TCCGCATTTGTTCAAGCCTAAA | 59.112 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
7303 | 12109 | 2.509569 | TCCGCATTTGTTCAAGCCTAA | 58.490 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
7304 | 12110 | 2.192664 | TCCGCATTTGTTCAAGCCTA | 57.807 | 45.000 | 0.00 | 0.00 | 0.00 | 3.93 |
7305 | 12111 | 1.327303 | TTCCGCATTTGTTCAAGCCT | 58.673 | 45.000 | 0.00 | 0.00 | 0.00 | 4.58 |
7306 | 12112 | 2.368655 | ATTCCGCATTTGTTCAAGCC | 57.631 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
7307 | 12113 | 4.091365 | GGTTTATTCCGCATTTGTTCAAGC | 59.909 | 41.667 | 0.00 | 0.00 | 0.00 | 4.01 |
7308 | 12114 | 5.469479 | AGGTTTATTCCGCATTTGTTCAAG | 58.531 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
7309 | 12115 | 5.461032 | AGGTTTATTCCGCATTTGTTCAA | 57.539 | 34.783 | 0.00 | 0.00 | 0.00 | 2.69 |
7310 | 12116 | 5.392595 | GCTAGGTTTATTCCGCATTTGTTCA | 60.393 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
7311 | 12117 | 5.034797 | GCTAGGTTTATTCCGCATTTGTTC | 58.965 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
7312 | 12118 | 4.438200 | CGCTAGGTTTATTCCGCATTTGTT | 60.438 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
7313 | 12119 | 3.064820 | CGCTAGGTTTATTCCGCATTTGT | 59.935 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
7314 | 12120 | 3.548014 | CCGCTAGGTTTATTCCGCATTTG | 60.548 | 47.826 | 0.00 | 0.00 | 0.00 | 2.32 |
7315 | 12121 | 2.616842 | CCGCTAGGTTTATTCCGCATTT | 59.383 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
7316 | 12122 | 2.218603 | CCGCTAGGTTTATTCCGCATT | 58.781 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
7317 | 12123 | 1.878953 | CCGCTAGGTTTATTCCGCAT | 58.121 | 50.000 | 0.00 | 0.00 | 0.00 | 4.73 |
7318 | 12124 | 3.372795 | CCGCTAGGTTTATTCCGCA | 57.627 | 52.632 | 0.00 | 0.00 | 0.00 | 5.69 |
7329 | 12135 | 3.438781 | TGCTTGACAAATTAACCGCTAGG | 59.561 | 43.478 | 0.00 | 0.00 | 45.13 | 3.02 |
7330 | 12136 | 4.083537 | TGTGCTTGACAAATTAACCGCTAG | 60.084 | 41.667 | 0.00 | 0.00 | 0.00 | 3.42 |
7331 | 12137 | 3.815962 | TGTGCTTGACAAATTAACCGCTA | 59.184 | 39.130 | 0.00 | 0.00 | 0.00 | 4.26 |
7332 | 12138 | 2.621055 | TGTGCTTGACAAATTAACCGCT | 59.379 | 40.909 | 0.00 | 0.00 | 0.00 | 5.52 |
7333 | 12139 | 3.006659 | TGTGCTTGACAAATTAACCGC | 57.993 | 42.857 | 0.00 | 0.00 | 0.00 | 5.68 |
7342 | 12148 | 5.784177 | TGTTTTAGGTTTTGTGCTTGACAA | 58.216 | 33.333 | 0.00 | 0.00 | 43.11 | 3.18 |
7343 | 12149 | 5.392767 | TGTTTTAGGTTTTGTGCTTGACA | 57.607 | 34.783 | 0.00 | 0.00 | 0.00 | 3.58 |
7344 | 12150 | 5.867174 | AGTTGTTTTAGGTTTTGTGCTTGAC | 59.133 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
7345 | 12151 | 6.031751 | AGTTGTTTTAGGTTTTGTGCTTGA | 57.968 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
7346 | 12152 | 6.475402 | CCTAGTTGTTTTAGGTTTTGTGCTTG | 59.525 | 38.462 | 0.00 | 0.00 | 34.27 | 4.01 |
7347 | 12153 | 6.569780 | CCTAGTTGTTTTAGGTTTTGTGCTT | 58.430 | 36.000 | 0.00 | 0.00 | 34.27 | 3.91 |
7348 | 12154 | 5.451381 | GCCTAGTTGTTTTAGGTTTTGTGCT | 60.451 | 40.000 | 0.77 | 0.00 | 39.91 | 4.40 |
7349 | 12155 | 4.743151 | GCCTAGTTGTTTTAGGTTTTGTGC | 59.257 | 41.667 | 0.77 | 0.00 | 39.91 | 4.57 |
7350 | 12156 | 6.144078 | AGCCTAGTTGTTTTAGGTTTTGTG | 57.856 | 37.500 | 0.77 | 0.00 | 39.91 | 3.33 |
7351 | 12157 | 5.889289 | TGAGCCTAGTTGTTTTAGGTTTTGT | 59.111 | 36.000 | 0.77 | 0.00 | 39.91 | 2.83 |
7352 | 12158 | 6.206498 | GTGAGCCTAGTTGTTTTAGGTTTTG | 58.794 | 40.000 | 0.77 | 0.00 | 39.91 | 2.44 |
7353 | 12159 | 5.301045 | GGTGAGCCTAGTTGTTTTAGGTTTT | 59.699 | 40.000 | 0.77 | 0.00 | 39.91 | 2.43 |
7354 | 12160 | 4.825634 | GGTGAGCCTAGTTGTTTTAGGTTT | 59.174 | 41.667 | 0.77 | 0.00 | 39.91 | 3.27 |
7355 | 12161 | 4.104261 | AGGTGAGCCTAGTTGTTTTAGGTT | 59.896 | 41.667 | 0.77 | 0.00 | 44.90 | 3.50 |
7356 | 12162 | 3.651423 | AGGTGAGCCTAGTTGTTTTAGGT | 59.349 | 43.478 | 0.77 | 0.00 | 44.90 | 3.08 |
7357 | 12163 | 4.287766 | AGGTGAGCCTAGTTGTTTTAGG | 57.712 | 45.455 | 0.00 | 0.00 | 44.90 | 2.69 |
7375 | 12181 | 2.656947 | AGTTGTTGGTGCACATAGGT | 57.343 | 45.000 | 20.43 | 0.00 | 0.00 | 3.08 |
7376 | 12182 | 4.675146 | GCATAAGTTGTTGGTGCACATAGG | 60.675 | 45.833 | 20.43 | 1.52 | 35.93 | 2.57 |
7377 | 12183 | 4.082841 | TGCATAAGTTGTTGGTGCACATAG | 60.083 | 41.667 | 20.43 | 0.00 | 40.51 | 2.23 |
7378 | 12184 | 3.823304 | TGCATAAGTTGTTGGTGCACATA | 59.177 | 39.130 | 20.43 | 3.77 | 40.51 | 2.29 |
7379 | 12185 | 2.627221 | TGCATAAGTTGTTGGTGCACAT | 59.373 | 40.909 | 20.43 | 0.00 | 40.51 | 3.21 |
7380 | 12186 | 2.027385 | TGCATAAGTTGTTGGTGCACA | 58.973 | 42.857 | 20.43 | 1.62 | 40.51 | 4.57 |
7381 | 12187 | 2.791383 | TGCATAAGTTGTTGGTGCAC | 57.209 | 45.000 | 8.80 | 8.80 | 40.51 | 4.57 |
7382 | 12188 | 3.715495 | CTTTGCATAAGTTGTTGGTGCA | 58.285 | 40.909 | 0.00 | 0.00 | 43.33 | 4.57 |
7383 | 12189 | 2.476241 | GCTTTGCATAAGTTGTTGGTGC | 59.524 | 45.455 | 9.40 | 0.00 | 36.39 | 5.01 |
7384 | 12190 | 3.715495 | TGCTTTGCATAAGTTGTTGGTG | 58.285 | 40.909 | 9.40 | 0.00 | 31.71 | 4.17 |
7385 | 12191 | 4.099266 | TCTTGCTTTGCATAAGTTGTTGGT | 59.901 | 37.500 | 9.40 | 0.00 | 38.76 | 3.67 |
7386 | 12192 | 4.619973 | TCTTGCTTTGCATAAGTTGTTGG | 58.380 | 39.130 | 9.40 | 0.00 | 38.76 | 3.77 |
7387 | 12193 | 7.596248 | ACTTATCTTGCTTTGCATAAGTTGTTG | 59.404 | 33.333 | 9.75 | 0.00 | 38.11 | 3.33 |
7388 | 12194 | 7.661040 | ACTTATCTTGCTTTGCATAAGTTGTT | 58.339 | 30.769 | 9.75 | 0.00 | 38.11 | 2.83 |
7389 | 12195 | 7.219484 | ACTTATCTTGCTTTGCATAAGTTGT | 57.781 | 32.000 | 9.75 | 0.00 | 38.11 | 3.32 |
7390 | 12196 | 9.065871 | GTTACTTATCTTGCTTTGCATAAGTTG | 57.934 | 33.333 | 16.78 | 2.67 | 38.11 | 3.16 |
7391 | 12197 | 9.014297 | AGTTACTTATCTTGCTTTGCATAAGTT | 57.986 | 29.630 | 16.78 | 3.44 | 38.11 | 2.66 |
7392 | 12198 | 8.567285 | AGTTACTTATCTTGCTTTGCATAAGT | 57.433 | 30.769 | 16.18 | 16.18 | 41.55 | 2.24 |
7395 | 12201 | 9.613428 | ACATAGTTACTTATCTTGCTTTGCATA | 57.387 | 29.630 | 0.00 | 0.00 | 38.76 | 3.14 |
7396 | 12202 | 8.400947 | CACATAGTTACTTATCTTGCTTTGCAT | 58.599 | 33.333 | 0.00 | 0.00 | 38.76 | 3.96 |
7397 | 12203 | 7.606073 | TCACATAGTTACTTATCTTGCTTTGCA | 59.394 | 33.333 | 0.00 | 0.00 | 36.47 | 4.08 |
7398 | 12204 | 7.974675 | TCACATAGTTACTTATCTTGCTTTGC | 58.025 | 34.615 | 0.00 | 0.00 | 0.00 | 3.68 |
7401 | 12207 | 9.482627 | GCTATCACATAGTTACTTATCTTGCTT | 57.517 | 33.333 | 0.00 | 0.00 | 35.29 | 3.91 |
7402 | 12208 | 8.642432 | TGCTATCACATAGTTACTTATCTTGCT | 58.358 | 33.333 | 0.00 | 0.00 | 35.29 | 3.91 |
7403 | 12209 | 8.818141 | TGCTATCACATAGTTACTTATCTTGC | 57.182 | 34.615 | 0.00 | 0.00 | 35.29 | 4.01 |
7433 | 12239 | 9.797642 | TGATAGCCATATTGTTCTTTGTCATAT | 57.202 | 29.630 | 0.00 | 0.00 | 0.00 | 1.78 |
7434 | 12240 | 9.056005 | GTGATAGCCATATTGTTCTTTGTCATA | 57.944 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
7435 | 12241 | 7.557358 | TGTGATAGCCATATTGTTCTTTGTCAT | 59.443 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
7436 | 12242 | 6.883756 | TGTGATAGCCATATTGTTCTTTGTCA | 59.116 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
7437 | 12243 | 7.320443 | TGTGATAGCCATATTGTTCTTTGTC | 57.680 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
7438 | 12244 | 7.701539 | TTGTGATAGCCATATTGTTCTTTGT | 57.298 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
7439 | 12245 | 8.246180 | ACTTTGTGATAGCCATATTGTTCTTTG | 58.754 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
7440 | 12246 | 8.353423 | ACTTTGTGATAGCCATATTGTTCTTT | 57.647 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
7441 | 12247 | 7.944729 | ACTTTGTGATAGCCATATTGTTCTT | 57.055 | 32.000 | 0.00 | 0.00 | 0.00 | 2.52 |
7442 | 12248 | 9.461312 | TTTACTTTGTGATAGCCATATTGTTCT | 57.539 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
7443 | 12249 | 9.722056 | CTTTACTTTGTGATAGCCATATTGTTC | 57.278 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
7444 | 12250 | 9.243105 | ACTTTACTTTGTGATAGCCATATTGTT | 57.757 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
7445 | 12251 | 8.677300 | CACTTTACTTTGTGATAGCCATATTGT | 58.323 | 33.333 | 0.00 | 0.00 | 36.38 | 2.71 |
7446 | 12252 | 7.645340 | GCACTTTACTTTGTGATAGCCATATTG | 59.355 | 37.037 | 0.00 | 0.00 | 36.38 | 1.90 |
7447 | 12253 | 7.339212 | TGCACTTTACTTTGTGATAGCCATATT | 59.661 | 33.333 | 0.00 | 0.00 | 36.38 | 1.28 |
7448 | 12254 | 6.828273 | TGCACTTTACTTTGTGATAGCCATAT | 59.172 | 34.615 | 0.00 | 0.00 | 36.38 | 1.78 |
7449 | 12255 | 6.176896 | TGCACTTTACTTTGTGATAGCCATA | 58.823 | 36.000 | 0.00 | 0.00 | 36.38 | 2.74 |
7450 | 12256 | 5.009631 | TGCACTTTACTTTGTGATAGCCAT | 58.990 | 37.500 | 0.00 | 0.00 | 36.38 | 4.40 |
7451 | 12257 | 4.393834 | TGCACTTTACTTTGTGATAGCCA | 58.606 | 39.130 | 0.00 | 0.00 | 36.38 | 4.75 |
7452 | 12258 | 5.567138 | ATGCACTTTACTTTGTGATAGCC | 57.433 | 39.130 | 0.00 | 0.00 | 36.38 | 3.93 |
7453 | 12259 | 7.752695 | ACTTATGCACTTTACTTTGTGATAGC | 58.247 | 34.615 | 0.00 | 0.00 | 36.38 | 2.97 |
7457 | 12263 | 8.564574 | CCTTTACTTATGCACTTTACTTTGTGA | 58.435 | 33.333 | 0.00 | 0.00 | 36.38 | 3.58 |
7458 | 12264 | 7.807907 | CCCTTTACTTATGCACTTTACTTTGTG | 59.192 | 37.037 | 0.00 | 0.00 | 37.26 | 3.33 |
7459 | 12265 | 7.523216 | GCCCTTTACTTATGCACTTTACTTTGT | 60.523 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
7460 | 12266 | 6.806739 | GCCCTTTACTTATGCACTTTACTTTG | 59.193 | 38.462 | 0.00 | 0.00 | 0.00 | 2.77 |
7461 | 12267 | 6.719829 | AGCCCTTTACTTATGCACTTTACTTT | 59.280 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
7462 | 12268 | 6.246163 | AGCCCTTTACTTATGCACTTTACTT | 58.754 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
7463 | 12269 | 5.816682 | AGCCCTTTACTTATGCACTTTACT | 58.183 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
7464 | 12270 | 5.220605 | CGAGCCCTTTACTTATGCACTTTAC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
7465 | 12271 | 4.873827 | CGAGCCCTTTACTTATGCACTTTA | 59.126 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
7466 | 12272 | 3.689649 | CGAGCCCTTTACTTATGCACTTT | 59.310 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
7467 | 12273 | 3.270877 | CGAGCCCTTTACTTATGCACTT | 58.729 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
7468 | 12274 | 2.420129 | CCGAGCCCTTTACTTATGCACT | 60.420 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
7469 | 12275 | 1.940613 | CCGAGCCCTTTACTTATGCAC | 59.059 | 52.381 | 0.00 | 0.00 | 0.00 | 4.57 |
7470 | 12276 | 1.134220 | CCCGAGCCCTTTACTTATGCA | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.96 |
7471 | 12277 | 1.134189 | ACCCGAGCCCTTTACTTATGC | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.14 |
7472 | 12278 | 3.203716 | GAACCCGAGCCCTTTACTTATG | 58.796 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
7473 | 12279 | 2.159000 | CGAACCCGAGCCCTTTACTTAT | 60.159 | 50.000 | 0.00 | 0.00 | 38.22 | 1.73 |
7474 | 12280 | 1.205417 | CGAACCCGAGCCCTTTACTTA | 59.795 | 52.381 | 0.00 | 0.00 | 38.22 | 2.24 |
7475 | 12281 | 0.036671 | CGAACCCGAGCCCTTTACTT | 60.037 | 55.000 | 0.00 | 0.00 | 38.22 | 2.24 |
7476 | 12282 | 1.595357 | CGAACCCGAGCCCTTTACT | 59.405 | 57.895 | 0.00 | 0.00 | 38.22 | 2.24 |
7477 | 12283 | 2.104859 | GCGAACCCGAGCCCTTTAC | 61.105 | 63.158 | 0.00 | 0.00 | 38.22 | 2.01 |
7478 | 12284 | 2.234913 | GAGCGAACCCGAGCCCTTTA | 62.235 | 60.000 | 0.00 | 0.00 | 38.22 | 1.85 |
7479 | 12285 | 3.607370 | GAGCGAACCCGAGCCCTTT | 62.607 | 63.158 | 0.00 | 0.00 | 38.22 | 3.11 |
7480 | 12286 | 4.083862 | GAGCGAACCCGAGCCCTT | 62.084 | 66.667 | 0.00 | 0.00 | 38.22 | 3.95 |
7485 | 12291 | 2.609183 | CTTACCCGAGCGAACCCGAG | 62.609 | 65.000 | 0.00 | 0.00 | 38.22 | 4.63 |
7486 | 12292 | 2.676121 | TTACCCGAGCGAACCCGA | 60.676 | 61.111 | 0.00 | 0.00 | 38.22 | 5.14 |
7487 | 12293 | 2.202703 | CTTACCCGAGCGAACCCG | 60.203 | 66.667 | 0.00 | 0.00 | 39.16 | 5.28 |
7488 | 12294 | 1.141234 | CTCTTACCCGAGCGAACCC | 59.859 | 63.158 | 0.00 | 0.00 | 0.00 | 4.11 |
7489 | 12295 | 0.745468 | ATCTCTTACCCGAGCGAACC | 59.255 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
7490 | 12296 | 3.370276 | GTTATCTCTTACCCGAGCGAAC | 58.630 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
7491 | 12297 | 2.360165 | GGTTATCTCTTACCCGAGCGAA | 59.640 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
7492 | 12298 | 1.952296 | GGTTATCTCTTACCCGAGCGA | 59.048 | 52.381 | 0.00 | 0.00 | 0.00 | 4.93 |
7493 | 12299 | 1.334779 | CGGTTATCTCTTACCCGAGCG | 60.335 | 57.143 | 0.00 | 0.00 | 41.08 | 5.03 |
7494 | 12300 | 1.952296 | TCGGTTATCTCTTACCCGAGC | 59.048 | 52.381 | 0.00 | 0.00 | 42.33 | 5.03 |
7496 | 12302 | 2.579873 | CCTCGGTTATCTCTTACCCGA | 58.420 | 52.381 | 0.00 | 0.00 | 44.74 | 5.14 |
7497 | 12303 | 1.000496 | GCCTCGGTTATCTCTTACCCG | 60.000 | 57.143 | 0.00 | 0.00 | 39.98 | 5.28 |
7498 | 12304 | 2.037144 | TGCCTCGGTTATCTCTTACCC | 58.963 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
7499 | 12305 | 2.543238 | CGTGCCTCGGTTATCTCTTACC | 60.543 | 54.545 | 0.00 | 0.00 | 35.71 | 2.85 |
7500 | 12306 | 2.728922 | CGTGCCTCGGTTATCTCTTAC | 58.271 | 52.381 | 0.00 | 0.00 | 35.71 | 2.34 |
7501 | 12307 | 1.066605 | GCGTGCCTCGGTTATCTCTTA | 59.933 | 52.381 | 0.99 | 0.00 | 40.26 | 2.10 |
7502 | 12308 | 0.179108 | GCGTGCCTCGGTTATCTCTT | 60.179 | 55.000 | 0.99 | 0.00 | 40.26 | 2.85 |
7503 | 12309 | 1.437986 | GCGTGCCTCGGTTATCTCT | 59.562 | 57.895 | 0.99 | 0.00 | 40.26 | 3.10 |
7504 | 12310 | 1.944676 | CGCGTGCCTCGGTTATCTC | 60.945 | 63.158 | 0.00 | 0.00 | 40.26 | 2.75 |
7505 | 12311 | 2.104331 | CGCGTGCCTCGGTTATCT | 59.896 | 61.111 | 0.00 | 0.00 | 40.26 | 1.98 |
7506 | 12312 | 2.960129 | CCGCGTGCCTCGGTTATC | 60.960 | 66.667 | 4.92 | 0.00 | 41.85 | 1.75 |
7507 | 12313 | 3.426117 | CTCCGCGTGCCTCGGTTAT | 62.426 | 63.158 | 4.92 | 0.00 | 46.49 | 1.89 |
7508 | 12314 | 4.124351 | CTCCGCGTGCCTCGGTTA | 62.124 | 66.667 | 4.92 | 0.00 | 46.49 | 2.85 |
7519 | 12325 | 3.538028 | ATACATCGCCGTCTCCGCG | 62.538 | 63.158 | 0.00 | 0.00 | 35.79 | 6.46 |
7520 | 12326 | 1.729838 | GATACATCGCCGTCTCCGC | 60.730 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
7521 | 12327 | 1.081376 | GGATACATCGCCGTCTCCG | 60.081 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
7522 | 12328 | 1.289380 | GGGATACATCGCCGTCTCC | 59.711 | 63.158 | 0.00 | 1.35 | 39.74 | 3.71 |
7523 | 12329 | 1.081376 | CGGGATACATCGCCGTCTC | 60.081 | 63.158 | 9.60 | 0.00 | 36.52 | 3.36 |
7524 | 12330 | 1.105167 | TTCGGGATACATCGCCGTCT | 61.105 | 55.000 | 14.62 | 0.00 | 39.78 | 4.18 |
7525 | 12331 | 0.663568 | CTTCGGGATACATCGCCGTC | 60.664 | 60.000 | 14.62 | 0.00 | 39.78 | 4.79 |
7526 | 12332 | 1.362717 | CTTCGGGATACATCGCCGT | 59.637 | 57.895 | 14.62 | 0.00 | 39.78 | 5.68 |
7527 | 12333 | 0.249322 | AACTTCGGGATACATCGCCG | 60.249 | 55.000 | 10.91 | 10.91 | 40.00 | 6.46 |
7528 | 12334 | 1.202486 | TGAACTTCGGGATACATCGCC | 60.202 | 52.381 | 1.15 | 0.00 | 36.50 | 5.54 |
7529 | 12335 | 1.859080 | GTGAACTTCGGGATACATCGC | 59.141 | 52.381 | 0.00 | 0.00 | 39.74 | 4.58 |
7530 | 12336 | 2.858344 | GTGTGAACTTCGGGATACATCG | 59.142 | 50.000 | 0.00 | 0.00 | 39.74 | 3.84 |
7531 | 12337 | 3.195661 | GGTGTGAACTTCGGGATACATC | 58.804 | 50.000 | 0.00 | 0.00 | 39.74 | 3.06 |
7532 | 12338 | 2.093128 | GGGTGTGAACTTCGGGATACAT | 60.093 | 50.000 | 0.00 | 0.00 | 39.74 | 2.29 |
7533 | 12339 | 1.276989 | GGGTGTGAACTTCGGGATACA | 59.723 | 52.381 | 0.00 | 0.00 | 39.74 | 2.29 |
7534 | 12340 | 1.553704 | AGGGTGTGAACTTCGGGATAC | 59.446 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
7535 | 12341 | 1.946984 | AGGGTGTGAACTTCGGGATA | 58.053 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
7536 | 12342 | 1.064825 | AAGGGTGTGAACTTCGGGAT | 58.935 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7537 | 12343 | 0.107831 | CAAGGGTGTGAACTTCGGGA | 59.892 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
7538 | 12344 | 1.515521 | GCAAGGGTGTGAACTTCGGG | 61.516 | 60.000 | 0.00 | 0.00 | 0.00 | 5.14 |
7539 | 12345 | 1.841663 | CGCAAGGGTGTGAACTTCGG | 61.842 | 60.000 | 0.00 | 0.00 | 37.45 | 4.30 |
7540 | 12346 | 1.569493 | CGCAAGGGTGTGAACTTCG | 59.431 | 57.895 | 0.00 | 0.00 | 37.45 | 3.79 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.