Multiple sequence alignment - TraesCS2B01G417900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G417900 | chr2B | 100.000 | 3885 | 0 | 0 | 1 | 3885 | 598559482 | 598563366 | 0.000000e+00 | 7175.0 |
1 | TraesCS2B01G417900 | chr2B | 94.872 | 39 | 2 | 0 | 3800 | 3838 | 211621975 | 211622013 | 1.170000e-05 | 62.1 |
2 | TraesCS2B01G417900 | chr2D | 95.546 | 2380 | 57 | 14 | 1118 | 3467 | 509229163 | 509231523 | 0.000000e+00 | 3762.0 |
3 | TraesCS2B01G417900 | chr2D | 90.139 | 791 | 44 | 16 | 1 | 777 | 509227873 | 509228643 | 0.000000e+00 | 998.0 |
4 | TraesCS2B01G417900 | chr2D | 94.702 | 151 | 8 | 0 | 3512 | 3662 | 509237464 | 509237614 | 6.490000e-58 | 235.0 |
5 | TraesCS2B01G417900 | chr2D | 84.706 | 170 | 13 | 4 | 3724 | 3885 | 509237624 | 509237788 | 1.450000e-34 | 158.0 |
6 | TraesCS2B01G417900 | chr2A | 92.612 | 2531 | 90 | 32 | 657 | 3108 | 652999504 | 653002016 | 0.000000e+00 | 3548.0 |
7 | TraesCS2B01G417900 | chr2A | 89.492 | 571 | 30 | 16 | 94 | 651 | 652998625 | 652999178 | 0.000000e+00 | 695.0 |
8 | TraesCS2B01G417900 | chr2A | 91.707 | 205 | 9 | 2 | 3094 | 3294 | 653002040 | 653002240 | 1.060000e-70 | 278.0 |
9 | TraesCS2B01G417900 | chr2A | 93.478 | 46 | 3 | 0 | 3795 | 3840 | 146790150 | 146790105 | 6.970000e-08 | 69.4 |
10 | TraesCS2B01G417900 | chr6A | 84.033 | 1453 | 232 | 0 | 1333 | 2785 | 476000065 | 476001517 | 0.000000e+00 | 1399.0 |
11 | TraesCS2B01G417900 | chr6B | 83.700 | 1454 | 235 | 2 | 1333 | 2785 | 484101010 | 484099558 | 0.000000e+00 | 1371.0 |
12 | TraesCS2B01G417900 | chr6B | 75.253 | 198 | 26 | 12 | 3665 | 3841 | 523952147 | 523952342 | 5.380000e-09 | 73.1 |
13 | TraesCS2B01G417900 | chr6D | 83.482 | 1453 | 240 | 0 | 1333 | 2785 | 336366395 | 336367847 | 0.000000e+00 | 1354.0 |
14 | TraesCS2B01G417900 | chr1A | 75.846 | 1300 | 268 | 36 | 1480 | 2750 | 339915537 | 339914255 | 1.530000e-173 | 619.0 |
15 | TraesCS2B01G417900 | chr1D | 75.692 | 1300 | 272 | 35 | 1480 | 2751 | 260588604 | 260589887 | 9.230000e-171 | 610.0 |
16 | TraesCS2B01G417900 | chr5A | 77.210 | 509 | 94 | 19 | 2154 | 2651 | 523816357 | 523816854 | 1.060000e-70 | 278.0 |
17 | TraesCS2B01G417900 | chr5A | 77.157 | 197 | 24 | 8 | 3666 | 3841 | 643354522 | 643354326 | 1.150000e-15 | 95.3 |
18 | TraesCS2B01G417900 | chr5D | 77.578 | 223 | 42 | 6 | 2500 | 2715 | 542592485 | 542592706 | 1.130000e-25 | 128.0 |
19 | TraesCS2B01G417900 | chr5B | 77.155 | 232 | 45 | 6 | 2491 | 2715 | 684230631 | 684230861 | 1.130000e-25 | 128.0 |
20 | TraesCS2B01G417900 | chr5B | 80.392 | 102 | 18 | 2 | 2127 | 2227 | 684228701 | 684228801 | 4.160000e-10 | 76.8 |
21 | TraesCS2B01G417900 | chr4A | 77.679 | 224 | 40 | 8 | 2500 | 2715 | 626440221 | 626440000 | 1.130000e-25 | 128.0 |
22 | TraesCS2B01G417900 | chr1B | 88.095 | 84 | 4 | 4 | 3759 | 3841 | 486853196 | 486853118 | 1.150000e-15 | 95.3 |
23 | TraesCS2B01G417900 | chr3D | 94.000 | 50 | 3 | 0 | 3792 | 3841 | 286881276 | 286881227 | 4.160000e-10 | 76.8 |
24 | TraesCS2B01G417900 | chr3A | 93.617 | 47 | 3 | 0 | 3792 | 3838 | 702519181 | 702519135 | 1.940000e-08 | 71.3 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G417900 | chr2B | 598559482 | 598563366 | 3884 | False | 7175 | 7175 | 100.000000 | 1 | 3885 | 1 | chr2B.!!$F2 | 3884 |
1 | TraesCS2B01G417900 | chr2D | 509227873 | 509231523 | 3650 | False | 2380 | 3762 | 92.842500 | 1 | 3467 | 2 | chr2D.!!$F1 | 3466 |
2 | TraesCS2B01G417900 | chr2A | 652998625 | 653002240 | 3615 | False | 1507 | 3548 | 91.270333 | 94 | 3294 | 3 | chr2A.!!$F1 | 3200 |
3 | TraesCS2B01G417900 | chr6A | 476000065 | 476001517 | 1452 | False | 1399 | 1399 | 84.033000 | 1333 | 2785 | 1 | chr6A.!!$F1 | 1452 |
4 | TraesCS2B01G417900 | chr6B | 484099558 | 484101010 | 1452 | True | 1371 | 1371 | 83.700000 | 1333 | 2785 | 1 | chr6B.!!$R1 | 1452 |
5 | TraesCS2B01G417900 | chr6D | 336366395 | 336367847 | 1452 | False | 1354 | 1354 | 83.482000 | 1333 | 2785 | 1 | chr6D.!!$F1 | 1452 |
6 | TraesCS2B01G417900 | chr1A | 339914255 | 339915537 | 1282 | True | 619 | 619 | 75.846000 | 1480 | 2750 | 1 | chr1A.!!$R1 | 1270 |
7 | TraesCS2B01G417900 | chr1D | 260588604 | 260589887 | 1283 | False | 610 | 610 | 75.692000 | 1480 | 2751 | 1 | chr1D.!!$F1 | 1271 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
496 | 511 | 0.394352 | CCATACCTGTGAACCCAGCC | 60.394 | 60.0 | 0.0 | 0.0 | 0.00 | 4.85 | F |
1031 | 1404 | 0.258774 | AGCTCCACCAACCAAACACT | 59.741 | 50.0 | 0.0 | 0.0 | 0.00 | 3.55 | F |
1867 | 2404 | 0.253347 | TCCTCCTCCAGGCATTCCTT | 60.253 | 55.0 | 0.0 | 0.0 | 41.93 | 3.36 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1837 | 2374 | 1.305718 | GAGGAGGAGGTCAGGCAGT | 60.306 | 63.158 | 0.00 | 0.0 | 0.00 | 4.40 | R |
2854 | 3406 | 0.529337 | CATTCGGCTGCTCGATGTCT | 60.529 | 55.000 | 12.63 | 0.0 | 39.03 | 3.41 | R |
3588 | 4222 | 0.036732 | AGGAGCAAATGTCGGAGCAA | 59.963 | 50.000 | 0.00 | 0.0 | 0.00 | 3.91 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 1.106944 | TCATGCCGCCGATACAGAGA | 61.107 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
35 | 36 | 9.372369 | CCGATACAGAGACTTTTCTTAGAAAAT | 57.628 | 33.333 | 18.81 | 10.33 | 29.47 | 1.82 |
52 | 53 | 5.930135 | AGAAAATATGCTGAATCGGTAGGT | 58.070 | 37.500 | 0.00 | 0.00 | 0.00 | 3.08 |
66 | 68 | 3.896888 | TCGGTAGGTCCAGTTGACTTTAA | 59.103 | 43.478 | 0.00 | 0.00 | 43.89 | 1.52 |
67 | 69 | 4.344679 | TCGGTAGGTCCAGTTGACTTTAAA | 59.655 | 41.667 | 0.00 | 0.00 | 43.89 | 1.52 |
68 | 70 | 5.058490 | CGGTAGGTCCAGTTGACTTTAAAA | 58.942 | 41.667 | 0.00 | 0.00 | 43.89 | 1.52 |
69 | 71 | 5.704053 | CGGTAGGTCCAGTTGACTTTAAAAT | 59.296 | 40.000 | 0.00 | 0.00 | 43.89 | 1.82 |
70 | 72 | 6.128363 | CGGTAGGTCCAGTTGACTTTAAAATC | 60.128 | 42.308 | 0.00 | 0.00 | 43.89 | 2.17 |
129 | 131 | 1.656441 | CCTGCAGTGGACTTTGTGC | 59.344 | 57.895 | 13.81 | 0.00 | 36.42 | 4.57 |
133 | 135 | 1.405105 | TGCAGTGGACTTTGTGCTTTC | 59.595 | 47.619 | 0.00 | 0.00 | 36.84 | 2.62 |
145 | 147 | 7.105241 | ACTTTGTGCTTTCTTTTCTCATCTT | 57.895 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
146 | 148 | 8.225603 | ACTTTGTGCTTTCTTTTCTCATCTTA | 57.774 | 30.769 | 0.00 | 0.00 | 0.00 | 2.10 |
147 | 149 | 8.854117 | ACTTTGTGCTTTCTTTTCTCATCTTAT | 58.146 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
148 | 150 | 9.688592 | CTTTGTGCTTTCTTTTCTCATCTTATT | 57.311 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
211 | 213 | 7.987458 | CCATTACAGCTCCAAAGAGATAAGTTA | 59.013 | 37.037 | 0.00 | 0.00 | 43.39 | 2.24 |
253 | 255 | 1.428448 | TGTATCAGCTCAACGCACAC | 58.572 | 50.000 | 0.00 | 0.00 | 42.61 | 3.82 |
258 | 260 | 3.414700 | GCTCAACGCACACCCGAG | 61.415 | 66.667 | 0.00 | 0.00 | 38.92 | 4.63 |
263 | 265 | 3.865929 | AACGCACACCCGAGAGCAG | 62.866 | 63.158 | 0.00 | 0.00 | 0.00 | 4.24 |
311 | 313 | 7.365652 | CCCTCCAGGTCTAGTAAAATAACACAT | 60.366 | 40.741 | 0.00 | 0.00 | 0.00 | 3.21 |
312 | 314 | 8.047310 | CCTCCAGGTCTAGTAAAATAACACATT | 58.953 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
313 | 315 | 9.099454 | CTCCAGGTCTAGTAAAATAACACATTC | 57.901 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
323 | 333 | 8.325997 | AGTAAAATAACACATTCGTATTCGCTC | 58.674 | 33.333 | 0.00 | 0.00 | 36.96 | 5.03 |
333 | 343 | 4.282950 | TCGTATTCGCTCGTCTACATTT | 57.717 | 40.909 | 0.00 | 0.00 | 36.96 | 2.32 |
361 | 371 | 9.612620 | CCTGATAGTTTTGTATGTTGAAAGAAC | 57.387 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
365 | 375 | 3.907894 | TTGTATGTTGAAAGAACCGGC | 57.092 | 42.857 | 0.00 | 0.00 | 0.00 | 6.13 |
379 | 390 | 4.940463 | AGAACCGGCTTTTAAAAGTTTCC | 58.060 | 39.130 | 24.95 | 17.72 | 38.28 | 3.13 |
385 | 396 | 4.671964 | CGGCTTTTAAAAGTTTCCGTACAC | 59.328 | 41.667 | 25.26 | 10.21 | 38.28 | 2.90 |
443 | 454 | 2.311542 | ACCAAAATCCTGTCCATGCCTA | 59.688 | 45.455 | 0.00 | 0.00 | 0.00 | 3.93 |
446 | 457 | 3.737559 | AAATCCTGTCCATGCCTACAA | 57.262 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
464 | 475 | 2.556189 | ACAAACATTCTAATGCACGGCA | 59.444 | 40.909 | 2.60 | 1.01 | 44.86 | 5.69 |
496 | 511 | 0.394352 | CCATACCTGTGAACCCAGCC | 60.394 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
514 | 529 | 2.691526 | AGCCTTGTTCATATGCCATGTG | 59.308 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
523 | 538 | 6.093909 | TGTTCATATGCCATGTGTTTCTAGTG | 59.906 | 38.462 | 1.18 | 0.00 | 0.00 | 2.74 |
578 | 597 | 1.409064 | TCCGATCAAGAATCCTGTCCG | 59.591 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
717 | 1064 | 6.835819 | ATGCTACTAGTGACTGTTACTGAA | 57.164 | 37.500 | 14.72 | 0.00 | 0.00 | 3.02 |
738 | 1085 | 8.237267 | ACTGAATTAGTTAAGGCAAAATTCTCG | 58.763 | 33.333 | 0.00 | 0.00 | 35.67 | 4.04 |
739 | 1086 | 7.027161 | TGAATTAGTTAAGGCAAAATTCTCGC | 58.973 | 34.615 | 0.00 | 0.00 | 37.42 | 5.03 |
806 | 1160 | 2.608752 | GGGAAAGTTGATGCTGTTGCTG | 60.609 | 50.000 | 0.00 | 0.00 | 40.48 | 4.41 |
807 | 1161 | 2.608752 | GGAAAGTTGATGCTGTTGCTGG | 60.609 | 50.000 | 0.00 | 0.00 | 40.48 | 4.85 |
813 | 1167 | 2.518836 | GATGCTGTTGCTGGACACGC | 62.519 | 60.000 | 0.00 | 0.00 | 40.48 | 5.34 |
817 | 1171 | 4.030452 | GTTGCTGGACACGCAGGC | 62.030 | 66.667 | 0.00 | 0.00 | 38.80 | 4.85 |
825 | 1179 | 1.446272 | GACACGCAGGCAGGAGTAC | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 2.73 |
875 | 1229 | 0.654160 | GTAATTAACACGGGCGGCTC | 59.346 | 55.000 | 9.56 | 0.00 | 0.00 | 4.70 |
876 | 1230 | 0.538118 | TAATTAACACGGGCGGCTCT | 59.462 | 50.000 | 9.56 | 0.00 | 0.00 | 4.09 |
877 | 1231 | 1.024579 | AATTAACACGGGCGGCTCTG | 61.025 | 55.000 | 9.56 | 6.91 | 0.00 | 3.35 |
878 | 1232 | 2.869503 | ATTAACACGGGCGGCTCTGG | 62.870 | 60.000 | 9.56 | 0.00 | 0.00 | 3.86 |
923 | 1278 | 1.337823 | ACGACAAAACCATCCCGAGAG | 60.338 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
928 | 1283 | 3.003480 | CAAAACCATCCCGAGAGAGAAC | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
932 | 1287 | 1.407258 | CCATCCCGAGAGAGAACTGTC | 59.593 | 57.143 | 0.00 | 0.00 | 33.79 | 3.51 |
941 | 1296 | 5.926542 | CCGAGAGAGAACTGTCAATTGTAAA | 59.073 | 40.000 | 5.13 | 0.00 | 36.40 | 2.01 |
942 | 1297 | 6.128795 | CCGAGAGAGAACTGTCAATTGTAAAC | 60.129 | 42.308 | 5.13 | 0.00 | 36.40 | 2.01 |
944 | 1299 | 5.696724 | AGAGAGAACTGTCAATTGTAAACGG | 59.303 | 40.000 | 5.13 | 4.27 | 0.00 | 4.44 |
945 | 1300 | 4.213482 | AGAGAACTGTCAATTGTAAACGGC | 59.787 | 41.667 | 5.13 | 0.00 | 0.00 | 5.68 |
947 | 1302 | 3.619233 | ACTGTCAATTGTAAACGGCAC | 57.381 | 42.857 | 5.13 | 0.00 | 0.00 | 5.01 |
953 | 1326 | 0.696501 | ATTGTAAACGGCACCCCTCT | 59.303 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
955 | 1328 | 1.447314 | GTAAACGGCACCCCTCTCG | 60.447 | 63.158 | 0.00 | 0.00 | 0.00 | 4.04 |
974 | 1347 | 1.504647 | GCCTCCGGCGCCTATAAAAC | 61.505 | 60.000 | 26.68 | 3.80 | 39.62 | 2.43 |
975 | 1348 | 1.219522 | CCTCCGGCGCCTATAAAACG | 61.220 | 60.000 | 26.68 | 8.26 | 0.00 | 3.60 |
979 | 1352 | 4.989588 | GCGCCTATAAAACGGCAC | 57.010 | 55.556 | 0.00 | 0.00 | 46.62 | 5.01 |
981 | 1354 | 1.639534 | CGCCTATAAAACGGCACCG | 59.360 | 57.895 | 7.71 | 7.71 | 46.62 | 4.94 |
982 | 1355 | 1.354155 | GCCTATAAAACGGCACCGC | 59.646 | 57.895 | 9.43 | 0.00 | 45.59 | 5.68 |
1027 | 1400 | 0.823356 | GCAGAGCTCCACCAACCAAA | 60.823 | 55.000 | 10.93 | 0.00 | 0.00 | 3.28 |
1031 | 1404 | 0.258774 | AGCTCCACCAACCAAACACT | 59.741 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
1043 | 1416 | 2.212110 | AAACACTACCCGCCTCCGT | 61.212 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
1084 | 1461 | 0.261696 | GCTCCCCCTCTCTCTCTCTT | 59.738 | 60.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1090 | 1467 | 1.106944 | CCTCTCTCTCTCTTCCCCGC | 61.107 | 65.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1091 | 1468 | 0.395036 | CTCTCTCTCTCTTCCCCGCA | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 5.69 |
1092 | 1469 | 0.395036 | TCTCTCTCTCTTCCCCGCAG | 60.395 | 60.000 | 0.00 | 0.00 | 0.00 | 5.18 |
1093 | 1470 | 2.015227 | CTCTCTCTCTTCCCCGCAGC | 62.015 | 65.000 | 0.00 | 0.00 | 0.00 | 5.25 |
1094 | 1471 | 3.077556 | TCTCTCTTCCCCGCAGCC | 61.078 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
1095 | 1472 | 3.080121 | CTCTCTTCCCCGCAGCCT | 61.080 | 66.667 | 0.00 | 0.00 | 0.00 | 4.58 |
1096 | 1473 | 3.077556 | TCTCTTCCCCGCAGCCTC | 61.078 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
1097 | 1474 | 4.168291 | CTCTTCCCCGCAGCCTCC | 62.168 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
1173 | 1699 | 3.861263 | CGGCGCCGTAAAAGCTCC | 61.861 | 66.667 | 39.71 | 0.53 | 34.35 | 4.70 |
1181 | 1707 | 0.788391 | CGTAAAAGCTCCGCGAAACT | 59.212 | 50.000 | 8.23 | 0.00 | 0.00 | 2.66 |
1213 | 1750 | 2.347490 | GCCGCTCCTCTGTTTCCA | 59.653 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
1282 | 1819 | 3.661648 | ATCACCGCCCCCTTGCTT | 61.662 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
1402 | 1939 | 1.954382 | GAAGCCTGGTCCGTTTCTTTT | 59.046 | 47.619 | 0.00 | 0.00 | 0.00 | 2.27 |
1837 | 2374 | 2.501723 | GGAGACCTACATTCTTGCCTCA | 59.498 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1867 | 2404 | 0.253347 | TCCTCCTCCAGGCATTCCTT | 60.253 | 55.000 | 0.00 | 0.00 | 41.93 | 3.36 |
2681 | 3230 | 2.526873 | ACTTCGAGGGCCTGTGGT | 60.527 | 61.111 | 12.95 | 0.89 | 0.00 | 4.16 |
2854 | 3406 | 1.872234 | GCTGCTTATCGACGACGCA | 60.872 | 57.895 | 14.86 | 14.86 | 39.58 | 5.24 |
2865 | 3417 | 2.202479 | CGACGCAGACATCGAGCA | 60.202 | 61.111 | 0.00 | 0.00 | 40.86 | 4.26 |
2872 | 3424 | 0.529337 | CAGACATCGAGCAGCCGAAT | 60.529 | 55.000 | 9.60 | 2.52 | 42.22 | 3.34 |
2892 | 3444 | 4.937201 | ATGATCGGTGTTGATAGCTACA | 57.063 | 40.909 | 0.00 | 0.00 | 0.00 | 2.74 |
2893 | 3445 | 4.041740 | TGATCGGTGTTGATAGCTACAC | 57.958 | 45.455 | 15.88 | 15.88 | 45.81 | 2.90 |
3116 | 3741 | 8.865793 | ACGTAGTGGTACTTGTTCGAAGGAAC | 62.866 | 46.154 | 0.00 | 0.19 | 46.74 | 3.62 |
3162 | 3787 | 4.196965 | GGAACAATCCGTCCGTCC | 57.803 | 61.111 | 0.00 | 0.00 | 35.59 | 4.79 |
3290 | 3923 | 1.228657 | AAAGTCGCGTGGCTTCCTTC | 61.229 | 55.000 | 17.31 | 0.00 | 0.00 | 3.46 |
3297 | 3930 | 0.526524 | CGTGGCTTCCTTCGCTAGAG | 60.527 | 60.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3303 | 3936 | 0.753262 | TTCCTTCGCTAGAGCATCCC | 59.247 | 55.000 | 1.89 | 0.00 | 42.21 | 3.85 |
3419 | 4053 | 8.991810 | GTTATATACCACGTGATTTGTTTTTCG | 58.008 | 33.333 | 19.30 | 0.00 | 0.00 | 3.46 |
3420 | 4054 | 2.456010 | ACCACGTGATTTGTTTTTCGC | 58.544 | 42.857 | 19.30 | 0.00 | 0.00 | 4.70 |
3421 | 4055 | 2.098443 | ACCACGTGATTTGTTTTTCGCT | 59.902 | 40.909 | 19.30 | 0.00 | 0.00 | 4.93 |
3422 | 4056 | 3.312973 | ACCACGTGATTTGTTTTTCGCTA | 59.687 | 39.130 | 19.30 | 0.00 | 0.00 | 4.26 |
3425 | 4059 | 5.230306 | CCACGTGATTTGTTTTTCGCTAAAA | 59.770 | 36.000 | 19.30 | 0.00 | 33.41 | 1.52 |
3459 | 4093 | 2.288213 | TGGAGTAAGCGACTGTTGTCTG | 60.288 | 50.000 | 0.00 | 0.00 | 39.06 | 3.51 |
3467 | 4101 | 2.408704 | GCGACTGTTGTCTGACATGTAC | 59.591 | 50.000 | 11.86 | 7.70 | 40.86 | 2.90 |
3468 | 4102 | 2.656897 | CGACTGTTGTCTGACATGTACG | 59.343 | 50.000 | 11.86 | 10.16 | 40.86 | 3.67 |
3469 | 4103 | 2.987149 | GACTGTTGTCTGACATGTACGG | 59.013 | 50.000 | 11.86 | 13.83 | 39.94 | 4.02 |
3470 | 4104 | 2.626266 | ACTGTTGTCTGACATGTACGGA | 59.374 | 45.455 | 20.92 | 6.41 | 0.00 | 4.69 |
3471 | 4105 | 3.245797 | CTGTTGTCTGACATGTACGGAG | 58.754 | 50.000 | 11.86 | 0.00 | 0.00 | 4.63 |
3472 | 4106 | 7.504203 | GACTGTTGTCTGACATGTACGGAGT | 62.504 | 48.000 | 20.92 | 12.75 | 41.74 | 3.85 |
3473 | 4107 | 3.822167 | TGTTGTCTGACATGTACGGAGTA | 59.178 | 43.478 | 11.86 | 0.00 | 45.11 | 2.59 |
3474 | 4108 | 9.434595 | GACTGTTGTCTGACATGTACGGAGTAT | 62.435 | 44.444 | 20.92 | 4.42 | 41.81 | 2.12 |
3510 | 4144 | 3.464111 | TTTTGCGGGGTAGAGTATAGC | 57.536 | 47.619 | 0.00 | 0.00 | 0.00 | 2.97 |
3511 | 4145 | 2.076207 | TTGCGGGGTAGAGTATAGCA | 57.924 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
3512 | 4146 | 2.076207 | TGCGGGGTAGAGTATAGCAA | 57.924 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3513 | 4147 | 1.961394 | TGCGGGGTAGAGTATAGCAAG | 59.039 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
3514 | 4148 | 2.236766 | GCGGGGTAGAGTATAGCAAGA | 58.763 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
3515 | 4149 | 2.826725 | GCGGGGTAGAGTATAGCAAGAT | 59.173 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3516 | 4150 | 3.119424 | GCGGGGTAGAGTATAGCAAGATC | 60.119 | 52.174 | 0.00 | 0.00 | 0.00 | 2.75 |
3517 | 4151 | 4.337145 | CGGGGTAGAGTATAGCAAGATCT | 58.663 | 47.826 | 0.00 | 0.00 | 0.00 | 2.75 |
3518 | 4152 | 5.498393 | CGGGGTAGAGTATAGCAAGATCTA | 58.502 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
3519 | 4153 | 5.944599 | CGGGGTAGAGTATAGCAAGATCTAA | 59.055 | 44.000 | 0.00 | 0.00 | 0.00 | 2.10 |
3520 | 4154 | 6.433404 | CGGGGTAGAGTATAGCAAGATCTAAA | 59.567 | 42.308 | 0.00 | 0.00 | 0.00 | 1.85 |
3521 | 4155 | 7.362229 | CGGGGTAGAGTATAGCAAGATCTAAAG | 60.362 | 44.444 | 0.00 | 0.00 | 0.00 | 1.85 |
3522 | 4156 | 7.670559 | GGGGTAGAGTATAGCAAGATCTAAAGA | 59.329 | 40.741 | 0.00 | 0.00 | 0.00 | 2.52 |
3523 | 4157 | 8.736244 | GGGTAGAGTATAGCAAGATCTAAAGAG | 58.264 | 40.741 | 0.00 | 0.00 | 0.00 | 2.85 |
3524 | 4158 | 9.292195 | GGTAGAGTATAGCAAGATCTAAAGAGT | 57.708 | 37.037 | 0.00 | 0.00 | 0.00 | 3.24 |
3526 | 4160 | 8.988546 | AGAGTATAGCAAGATCTAAAGAGTGA | 57.011 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
3527 | 4161 | 9.586732 | AGAGTATAGCAAGATCTAAAGAGTGAT | 57.413 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
3541 | 4175 | 9.998106 | TCTAAAGAGTGATTTATTACCCTATGC | 57.002 | 33.333 | 0.00 | 0.00 | 0.00 | 3.14 |
3542 | 4176 | 9.778741 | CTAAAGAGTGATTTATTACCCTATGCA | 57.221 | 33.333 | 0.00 | 0.00 | 0.00 | 3.96 |
3546 | 4180 | 9.726438 | AGAGTGATTTATTACCCTATGCATAAC | 57.274 | 33.333 | 8.00 | 0.00 | 0.00 | 1.89 |
3547 | 4181 | 8.863872 | AGTGATTTATTACCCTATGCATAACC | 57.136 | 34.615 | 8.00 | 0.00 | 0.00 | 2.85 |
3548 | 4182 | 7.606456 | AGTGATTTATTACCCTATGCATAACCG | 59.394 | 37.037 | 8.00 | 0.63 | 0.00 | 4.44 |
3549 | 4183 | 7.389607 | GTGATTTATTACCCTATGCATAACCGT | 59.610 | 37.037 | 8.00 | 6.55 | 0.00 | 4.83 |
3550 | 4184 | 7.604927 | TGATTTATTACCCTATGCATAACCGTC | 59.395 | 37.037 | 8.00 | 0.00 | 0.00 | 4.79 |
3551 | 4185 | 4.967084 | ATTACCCTATGCATAACCGTCA | 57.033 | 40.909 | 8.00 | 0.00 | 0.00 | 4.35 |
3552 | 4186 | 2.910688 | ACCCTATGCATAACCGTCAG | 57.089 | 50.000 | 8.00 | 0.00 | 0.00 | 3.51 |
3553 | 4187 | 1.416401 | ACCCTATGCATAACCGTCAGG | 59.584 | 52.381 | 8.00 | 5.17 | 45.13 | 3.86 |
3554 | 4188 | 1.691976 | CCCTATGCATAACCGTCAGGA | 59.308 | 52.381 | 8.00 | 0.00 | 41.02 | 3.86 |
3555 | 4189 | 2.303022 | CCCTATGCATAACCGTCAGGAT | 59.697 | 50.000 | 8.00 | 0.00 | 41.02 | 3.24 |
3556 | 4190 | 3.513912 | CCCTATGCATAACCGTCAGGATA | 59.486 | 47.826 | 8.00 | 0.00 | 41.02 | 2.59 |
3557 | 4191 | 4.382040 | CCCTATGCATAACCGTCAGGATAG | 60.382 | 50.000 | 8.00 | 0.00 | 41.02 | 2.08 |
3558 | 4192 | 4.462834 | CCTATGCATAACCGTCAGGATAGA | 59.537 | 45.833 | 8.00 | 0.00 | 41.02 | 1.98 |
3559 | 4193 | 4.527509 | ATGCATAACCGTCAGGATAGAG | 57.472 | 45.455 | 0.00 | 0.00 | 41.02 | 2.43 |
3560 | 4194 | 3.296854 | TGCATAACCGTCAGGATAGAGT | 58.703 | 45.455 | 0.00 | 0.00 | 41.02 | 3.24 |
3561 | 4195 | 3.704566 | TGCATAACCGTCAGGATAGAGTT | 59.295 | 43.478 | 0.00 | 0.00 | 41.02 | 3.01 |
3562 | 4196 | 4.891168 | TGCATAACCGTCAGGATAGAGTTA | 59.109 | 41.667 | 0.00 | 0.00 | 41.02 | 2.24 |
3563 | 4197 | 5.361571 | TGCATAACCGTCAGGATAGAGTTAA | 59.638 | 40.000 | 0.00 | 0.00 | 41.02 | 2.01 |
3564 | 4198 | 5.921408 | GCATAACCGTCAGGATAGAGTTAAG | 59.079 | 44.000 | 0.00 | 0.00 | 41.02 | 1.85 |
3565 | 4199 | 6.238953 | GCATAACCGTCAGGATAGAGTTAAGA | 60.239 | 42.308 | 0.00 | 0.00 | 41.02 | 2.10 |
3566 | 4200 | 7.683704 | GCATAACCGTCAGGATAGAGTTAAGAA | 60.684 | 40.741 | 0.00 | 0.00 | 41.02 | 2.52 |
3567 | 4201 | 6.600882 | AACCGTCAGGATAGAGTTAAGAAA | 57.399 | 37.500 | 0.00 | 0.00 | 41.02 | 2.52 |
3568 | 4202 | 6.600882 | ACCGTCAGGATAGAGTTAAGAAAA | 57.399 | 37.500 | 0.00 | 0.00 | 41.02 | 2.29 |
3569 | 4203 | 6.631962 | ACCGTCAGGATAGAGTTAAGAAAAG | 58.368 | 40.000 | 0.00 | 0.00 | 41.02 | 2.27 |
3570 | 4204 | 6.210984 | ACCGTCAGGATAGAGTTAAGAAAAGT | 59.789 | 38.462 | 0.00 | 0.00 | 41.02 | 2.66 |
3571 | 4205 | 7.395489 | ACCGTCAGGATAGAGTTAAGAAAAGTA | 59.605 | 37.037 | 0.00 | 0.00 | 41.02 | 2.24 |
3572 | 4206 | 7.701501 | CCGTCAGGATAGAGTTAAGAAAAGTAC | 59.298 | 40.741 | 0.00 | 0.00 | 41.02 | 2.73 |
3573 | 4207 | 7.428761 | CGTCAGGATAGAGTTAAGAAAAGTACG | 59.571 | 40.741 | 0.00 | 0.00 | 0.00 | 3.67 |
3574 | 4208 | 8.242739 | GTCAGGATAGAGTTAAGAAAAGTACGT | 58.757 | 37.037 | 0.00 | 0.00 | 0.00 | 3.57 |
3575 | 4209 | 8.800332 | TCAGGATAGAGTTAAGAAAAGTACGTT | 58.200 | 33.333 | 0.00 | 0.00 | 0.00 | 3.99 |
3576 | 4210 | 9.420551 | CAGGATAGAGTTAAGAAAAGTACGTTT | 57.579 | 33.333 | 6.48 | 6.48 | 0.00 | 3.60 |
3577 | 4211 | 9.993454 | AGGATAGAGTTAAGAAAAGTACGTTTT | 57.007 | 29.630 | 8.21 | 5.64 | 41.29 | 2.43 |
3591 | 4225 | 7.998081 | AAGTACGTTTTTATTACACGATTGC | 57.002 | 32.000 | 0.00 | 0.00 | 37.37 | 3.56 |
3592 | 4226 | 7.355332 | AGTACGTTTTTATTACACGATTGCT | 57.645 | 32.000 | 0.00 | 0.00 | 37.37 | 3.91 |
3593 | 4227 | 7.450627 | AGTACGTTTTTATTACACGATTGCTC | 58.549 | 34.615 | 0.00 | 0.00 | 37.37 | 4.26 |
3594 | 4228 | 5.624292 | ACGTTTTTATTACACGATTGCTCC | 58.376 | 37.500 | 0.00 | 0.00 | 37.37 | 4.70 |
3595 | 4229 | 4.721977 | CGTTTTTATTACACGATTGCTCCG | 59.278 | 41.667 | 0.00 | 0.00 | 35.93 | 4.63 |
3596 | 4230 | 5.444877 | CGTTTTTATTACACGATTGCTCCGA | 60.445 | 40.000 | 0.00 | 0.00 | 35.93 | 4.55 |
3597 | 4231 | 5.459110 | TTTTATTACACGATTGCTCCGAC | 57.541 | 39.130 | 0.00 | 0.00 | 0.00 | 4.79 |
3598 | 4232 | 2.665649 | ATTACACGATTGCTCCGACA | 57.334 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3599 | 4233 | 2.665649 | TTACACGATTGCTCCGACAT | 57.334 | 45.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3600 | 4234 | 2.665649 | TACACGATTGCTCCGACATT | 57.334 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3601 | 4235 | 1.808411 | ACACGATTGCTCCGACATTT | 58.192 | 45.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3602 | 4236 | 1.464608 | ACACGATTGCTCCGACATTTG | 59.535 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
3603 | 4237 | 0.447801 | ACGATTGCTCCGACATTTGC | 59.552 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
3604 | 4238 | 0.729116 | CGATTGCTCCGACATTTGCT | 59.271 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3605 | 4239 | 1.267732 | CGATTGCTCCGACATTTGCTC | 60.268 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
3606 | 4240 | 1.064654 | GATTGCTCCGACATTTGCTCC | 59.935 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
3607 | 4241 | 0.036732 | TTGCTCCGACATTTGCTCCT | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3608 | 4242 | 0.901827 | TGCTCCGACATTTGCTCCTA | 59.098 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
3609 | 4243 | 1.291132 | GCTCCGACATTTGCTCCTAC | 58.709 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3610 | 4244 | 1.134670 | GCTCCGACATTTGCTCCTACT | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
3611 | 4245 | 2.100916 | GCTCCGACATTTGCTCCTACTA | 59.899 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3612 | 4246 | 3.243907 | GCTCCGACATTTGCTCCTACTAT | 60.244 | 47.826 | 0.00 | 0.00 | 0.00 | 2.12 |
3613 | 4247 | 4.302455 | CTCCGACATTTGCTCCTACTATG | 58.698 | 47.826 | 0.00 | 0.00 | 0.00 | 2.23 |
3614 | 4248 | 3.958147 | TCCGACATTTGCTCCTACTATGA | 59.042 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
3615 | 4249 | 4.588951 | TCCGACATTTGCTCCTACTATGAT | 59.411 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
3616 | 4250 | 5.070446 | TCCGACATTTGCTCCTACTATGATT | 59.930 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3617 | 4251 | 5.760253 | CCGACATTTGCTCCTACTATGATTT | 59.240 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
3618 | 4252 | 6.260936 | CCGACATTTGCTCCTACTATGATTTT | 59.739 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
3619 | 4253 | 7.348201 | CGACATTTGCTCCTACTATGATTTTC | 58.652 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
3620 | 4254 | 7.251704 | ACATTTGCTCCTACTATGATTTTCG | 57.748 | 36.000 | 0.00 | 0.00 | 0.00 | 3.46 |
3621 | 4255 | 7.047891 | ACATTTGCTCCTACTATGATTTTCGA | 58.952 | 34.615 | 0.00 | 0.00 | 0.00 | 3.71 |
3622 | 4256 | 7.552687 | ACATTTGCTCCTACTATGATTTTCGAA | 59.447 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
3623 | 4257 | 7.539712 | TTTGCTCCTACTATGATTTTCGAAG | 57.460 | 36.000 | 0.00 | 0.00 | 0.00 | 3.79 |
3624 | 4258 | 6.465439 | TGCTCCTACTATGATTTTCGAAGA | 57.535 | 37.500 | 0.00 | 0.00 | 0.00 | 2.87 |
3625 | 4259 | 6.873997 | TGCTCCTACTATGATTTTCGAAGAA | 58.126 | 36.000 | 0.00 | 0.00 | 45.90 | 2.52 |
3626 | 4260 | 7.327975 | TGCTCCTACTATGATTTTCGAAGAAA | 58.672 | 34.615 | 0.00 | 0.00 | 45.90 | 2.52 |
3627 | 4261 | 7.822334 | TGCTCCTACTATGATTTTCGAAGAAAA | 59.178 | 33.333 | 9.90 | 9.90 | 45.90 | 2.29 |
3628 | 4262 | 8.665685 | GCTCCTACTATGATTTTCGAAGAAAAA | 58.334 | 33.333 | 11.28 | 0.00 | 45.90 | 1.94 |
3650 | 4284 | 7.566760 | AAAAACATGCGATATTATCCTGTCA | 57.433 | 32.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3651 | 4285 | 6.791887 | AAACATGCGATATTATCCTGTCAG | 57.208 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
3652 | 4286 | 4.248859 | ACATGCGATATTATCCTGTCAGC | 58.751 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
3653 | 4287 | 4.020751 | ACATGCGATATTATCCTGTCAGCT | 60.021 | 41.667 | 0.00 | 0.00 | 0.00 | 4.24 |
3654 | 4288 | 5.185828 | ACATGCGATATTATCCTGTCAGCTA | 59.814 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
3655 | 4289 | 5.722021 | TGCGATATTATCCTGTCAGCTAA | 57.278 | 39.130 | 0.00 | 0.00 | 0.00 | 3.09 |
3656 | 4290 | 6.286240 | TGCGATATTATCCTGTCAGCTAAT | 57.714 | 37.500 | 0.00 | 3.22 | 0.00 | 1.73 |
3657 | 4291 | 6.101997 | TGCGATATTATCCTGTCAGCTAATG | 58.898 | 40.000 | 12.66 | 2.75 | 0.00 | 1.90 |
3658 | 4292 | 6.071391 | TGCGATATTATCCTGTCAGCTAATGA | 60.071 | 38.462 | 12.66 | 0.00 | 34.79 | 2.57 |
3659 | 4293 | 6.813649 | GCGATATTATCCTGTCAGCTAATGAA | 59.186 | 38.462 | 12.66 | 0.34 | 40.43 | 2.57 |
3660 | 4294 | 7.331934 | GCGATATTATCCTGTCAGCTAATGAAA | 59.668 | 37.037 | 12.66 | 0.00 | 40.43 | 2.69 |
3661 | 4295 | 8.651588 | CGATATTATCCTGTCAGCTAATGAAAC | 58.348 | 37.037 | 12.66 | 4.86 | 40.43 | 2.78 |
3662 | 4296 | 9.717942 | GATATTATCCTGTCAGCTAATGAAACT | 57.282 | 33.333 | 12.66 | 0.00 | 40.43 | 2.66 |
3663 | 4297 | 9.717942 | ATATTATCCTGTCAGCTAATGAAACTC | 57.282 | 33.333 | 12.66 | 0.00 | 40.43 | 3.01 |
3664 | 4298 | 4.890158 | TCCTGTCAGCTAATGAAACTCA | 57.110 | 40.909 | 0.00 | 0.00 | 40.43 | 3.41 |
3665 | 4299 | 4.825422 | TCCTGTCAGCTAATGAAACTCAG | 58.175 | 43.478 | 0.00 | 0.00 | 40.43 | 3.35 |
3666 | 4300 | 4.528206 | TCCTGTCAGCTAATGAAACTCAGA | 59.472 | 41.667 | 0.00 | 0.00 | 40.43 | 3.27 |
3667 | 4301 | 4.869297 | CCTGTCAGCTAATGAAACTCAGAG | 59.131 | 45.833 | 0.00 | 0.00 | 40.43 | 3.35 |
3668 | 4302 | 4.248859 | TGTCAGCTAATGAAACTCAGAGC | 58.751 | 43.478 | 0.00 | 5.58 | 40.43 | 4.09 |
3669 | 4303 | 4.248859 | GTCAGCTAATGAAACTCAGAGCA | 58.751 | 43.478 | 13.04 | 0.00 | 40.43 | 4.26 |
3670 | 4304 | 4.874966 | GTCAGCTAATGAAACTCAGAGCAT | 59.125 | 41.667 | 13.04 | 0.00 | 40.43 | 3.79 |
3671 | 4305 | 4.874396 | TCAGCTAATGAAACTCAGAGCATG | 59.126 | 41.667 | 13.04 | 0.00 | 34.02 | 4.06 |
3672 | 4306 | 4.874396 | CAGCTAATGAAACTCAGAGCATGA | 59.126 | 41.667 | 13.04 | 0.00 | 36.21 | 3.07 |
3673 | 4307 | 4.874966 | AGCTAATGAAACTCAGAGCATGAC | 59.125 | 41.667 | 13.04 | 0.00 | 33.22 | 3.06 |
3674 | 4308 | 4.874966 | GCTAATGAAACTCAGAGCATGACT | 59.125 | 41.667 | 0.00 | 0.00 | 33.22 | 3.41 |
3675 | 4309 | 5.220624 | GCTAATGAAACTCAGAGCATGACTG | 60.221 | 44.000 | 12.19 | 12.19 | 33.22 | 3.51 |
3676 | 4310 | 3.049708 | TGAAACTCAGAGCATGACTGG | 57.950 | 47.619 | 16.40 | 11.34 | 36.22 | 4.00 |
3677 | 4311 | 2.369860 | TGAAACTCAGAGCATGACTGGT | 59.630 | 45.455 | 16.40 | 11.79 | 36.22 | 4.00 |
3678 | 4312 | 3.181451 | TGAAACTCAGAGCATGACTGGTT | 60.181 | 43.478 | 16.40 | 15.39 | 36.22 | 3.67 |
3679 | 4313 | 2.758736 | ACTCAGAGCATGACTGGTTC | 57.241 | 50.000 | 16.40 | 0.00 | 36.22 | 3.62 |
3680 | 4314 | 1.277557 | ACTCAGAGCATGACTGGTTCC | 59.722 | 52.381 | 16.40 | 0.00 | 36.22 | 3.62 |
3681 | 4315 | 1.277273 | CTCAGAGCATGACTGGTTCCA | 59.723 | 52.381 | 16.40 | 0.00 | 36.22 | 3.53 |
3682 | 4316 | 1.911357 | TCAGAGCATGACTGGTTCCAT | 59.089 | 47.619 | 16.40 | 0.00 | 36.22 | 3.41 |
3683 | 4317 | 2.014857 | CAGAGCATGACTGGTTCCATG | 58.985 | 52.381 | 0.00 | 0.00 | 42.13 | 3.66 |
3686 | 4320 | 3.269578 | CATGACTGGTTCCATGCCA | 57.730 | 52.632 | 0.00 | 0.00 | 34.52 | 4.92 |
3687 | 4321 | 1.548081 | CATGACTGGTTCCATGCCAA | 58.452 | 50.000 | 0.00 | 0.00 | 35.32 | 4.52 |
3688 | 4322 | 1.894466 | CATGACTGGTTCCATGCCAAA | 59.106 | 47.619 | 0.00 | 0.00 | 35.32 | 3.28 |
3689 | 4323 | 2.307496 | TGACTGGTTCCATGCCAAAT | 57.693 | 45.000 | 0.00 | 0.00 | 35.32 | 2.32 |
3690 | 4324 | 3.448093 | TGACTGGTTCCATGCCAAATA | 57.552 | 42.857 | 0.00 | 0.00 | 35.32 | 1.40 |
3691 | 4325 | 3.979911 | TGACTGGTTCCATGCCAAATAT | 58.020 | 40.909 | 0.00 | 0.00 | 35.32 | 1.28 |
3692 | 4326 | 4.352009 | TGACTGGTTCCATGCCAAATATT | 58.648 | 39.130 | 0.00 | 0.00 | 35.32 | 1.28 |
3693 | 4327 | 4.160065 | TGACTGGTTCCATGCCAAATATTG | 59.840 | 41.667 | 0.00 | 0.00 | 35.32 | 1.90 |
3727 | 4361 | 5.876612 | TTTGGCAAATATCAAATGTTGGC | 57.123 | 34.783 | 8.93 | 0.00 | 44.36 | 4.52 |
3728 | 4362 | 4.822685 | TGGCAAATATCAAATGTTGGCT | 57.177 | 36.364 | 9.71 | 0.00 | 44.40 | 4.75 |
3729 | 4363 | 5.929058 | TGGCAAATATCAAATGTTGGCTA | 57.071 | 34.783 | 9.71 | 0.00 | 44.40 | 3.93 |
3730 | 4364 | 5.904941 | TGGCAAATATCAAATGTTGGCTAG | 58.095 | 37.500 | 9.71 | 0.00 | 44.40 | 3.42 |
3731 | 4365 | 5.421693 | TGGCAAATATCAAATGTTGGCTAGT | 59.578 | 36.000 | 9.71 | 0.00 | 44.40 | 2.57 |
3732 | 4366 | 5.750067 | GGCAAATATCAAATGTTGGCTAGTG | 59.250 | 40.000 | 0.00 | 0.00 | 41.77 | 2.74 |
3733 | 4367 | 5.750067 | GCAAATATCAAATGTTGGCTAGTGG | 59.250 | 40.000 | 0.00 | 0.00 | 28.77 | 4.00 |
3734 | 4368 | 6.627953 | GCAAATATCAAATGTTGGCTAGTGGT | 60.628 | 38.462 | 0.00 | 0.00 | 28.77 | 4.16 |
3735 | 4369 | 7.322664 | CAAATATCAAATGTTGGCTAGTGGTT | 58.677 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
3736 | 4370 | 4.789012 | ATCAAATGTTGGCTAGTGGTTG | 57.211 | 40.909 | 0.00 | 0.00 | 0.00 | 3.77 |
3737 | 4371 | 2.890311 | TCAAATGTTGGCTAGTGGTTGG | 59.110 | 45.455 | 0.00 | 0.00 | 0.00 | 3.77 |
3738 | 4372 | 2.627699 | CAAATGTTGGCTAGTGGTTGGT | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
3739 | 4373 | 2.675658 | ATGTTGGCTAGTGGTTGGTT | 57.324 | 45.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3740 | 4374 | 1.686355 | TGTTGGCTAGTGGTTGGTTG | 58.314 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
3741 | 4375 | 1.213182 | TGTTGGCTAGTGGTTGGTTGA | 59.787 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
3742 | 4376 | 1.607148 | GTTGGCTAGTGGTTGGTTGAC | 59.393 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
3743 | 4377 | 1.136828 | TGGCTAGTGGTTGGTTGACT | 58.863 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3744 | 4378 | 2.331166 | TGGCTAGTGGTTGGTTGACTA | 58.669 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
3745 | 4379 | 2.038033 | TGGCTAGTGGTTGGTTGACTAC | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
3762 | 4396 | 7.455641 | TTGACTACCAACTTTTCTTGACAAA | 57.544 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
3763 | 4397 | 7.455641 | TGACTACCAACTTTTCTTGACAAAA | 57.544 | 32.000 | 0.00 | 0.00 | 0.00 | 2.44 |
3764 | 4398 | 7.887381 | TGACTACCAACTTTTCTTGACAAAAA | 58.113 | 30.769 | 0.00 | 0.00 | 0.00 | 1.94 |
3765 | 4399 | 8.026607 | TGACTACCAACTTTTCTTGACAAAAAG | 58.973 | 33.333 | 9.75 | 9.75 | 45.15 | 2.27 |
3772 | 4406 | 6.479095 | CTTTTCTTGACAAAAAGTTGCCAA | 57.521 | 33.333 | 4.76 | 0.00 | 38.38 | 4.52 |
3773 | 4407 | 7.075674 | CTTTTCTTGACAAAAAGTTGCCAAT | 57.924 | 32.000 | 4.76 | 0.00 | 36.64 | 3.16 |
3774 | 4408 | 8.195617 | CTTTTCTTGACAAAAAGTTGCCAATA | 57.804 | 30.769 | 4.76 | 0.00 | 36.64 | 1.90 |
3775 | 4409 | 8.729805 | TTTTCTTGACAAAAAGTTGCCAATAT | 57.270 | 26.923 | 0.00 | 0.00 | 36.64 | 1.28 |
3776 | 4410 | 8.729805 | TTTCTTGACAAAAAGTTGCCAATATT | 57.270 | 26.923 | 0.00 | 0.00 | 36.64 | 1.28 |
3777 | 4411 | 8.729805 | TTCTTGACAAAAAGTTGCCAATATTT | 57.270 | 26.923 | 0.00 | 0.00 | 36.64 | 1.40 |
3778 | 4412 | 8.140677 | TCTTGACAAAAAGTTGCCAATATTTG | 57.859 | 30.769 | 9.55 | 9.55 | 36.64 | 2.32 |
3795 | 4429 | 3.984838 | TGGCAACATTTGACTTGGC | 57.015 | 47.368 | 0.00 | 0.00 | 46.17 | 4.52 |
3796 | 4430 | 1.412079 | TGGCAACATTTGACTTGGCT | 58.588 | 45.000 | 5.66 | 0.00 | 46.17 | 4.75 |
3797 | 4431 | 1.761784 | TGGCAACATTTGACTTGGCTT | 59.238 | 42.857 | 5.66 | 0.00 | 46.17 | 4.35 |
3798 | 4432 | 2.137523 | GGCAACATTTGACTTGGCTTG | 58.862 | 47.619 | 0.00 | 0.00 | 39.30 | 4.01 |
3799 | 4433 | 1.528161 | GCAACATTTGACTTGGCTTGC | 59.472 | 47.619 | 0.00 | 0.00 | 0.00 | 4.01 |
3800 | 4434 | 2.137523 | CAACATTTGACTTGGCTTGCC | 58.862 | 47.619 | 4.43 | 4.43 | 0.00 | 4.52 |
3801 | 4435 | 1.412079 | ACATTTGACTTGGCTTGCCA | 58.588 | 45.000 | 10.65 | 10.65 | 0.00 | 4.92 |
3802 | 4436 | 1.761784 | ACATTTGACTTGGCTTGCCAA | 59.238 | 42.857 | 23.48 | 23.48 | 0.00 | 4.52 |
3803 | 4437 | 2.170187 | ACATTTGACTTGGCTTGCCAAA | 59.830 | 40.909 | 24.70 | 12.35 | 0.00 | 3.28 |
3804 | 4438 | 3.181452 | ACATTTGACTTGGCTTGCCAAAT | 60.181 | 39.130 | 24.70 | 17.42 | 37.77 | 2.32 |
3805 | 4439 | 4.040217 | ACATTTGACTTGGCTTGCCAAATA | 59.960 | 37.500 | 24.70 | 12.92 | 36.17 | 1.40 |
3806 | 4440 | 4.888326 | TTTGACTTGGCTTGCCAAATAT | 57.112 | 36.364 | 24.70 | 14.78 | 0.00 | 1.28 |
3807 | 4441 | 4.888326 | TTGACTTGGCTTGCCAAATATT | 57.112 | 36.364 | 24.70 | 11.59 | 0.00 | 1.28 |
3808 | 4442 | 4.191033 | TGACTTGGCTTGCCAAATATTG | 57.809 | 40.909 | 24.70 | 16.17 | 0.00 | 1.90 |
3809 | 4443 | 3.831333 | TGACTTGGCTTGCCAAATATTGA | 59.169 | 39.130 | 24.70 | 4.38 | 0.00 | 2.57 |
3810 | 4444 | 4.176271 | GACTTGGCTTGCCAAATATTGAC | 58.824 | 43.478 | 24.70 | 11.51 | 0.00 | 3.18 |
3811 | 4445 | 3.577848 | ACTTGGCTTGCCAAATATTGACA | 59.422 | 39.130 | 24.70 | 3.01 | 0.00 | 3.58 |
3812 | 4446 | 4.040217 | ACTTGGCTTGCCAAATATTGACAA | 59.960 | 37.500 | 24.70 | 2.33 | 32.09 | 3.18 |
3813 | 4447 | 4.822685 | TGGCTTGCCAAATATTGACAAT | 57.177 | 36.364 | 12.40 | 5.87 | 32.60 | 2.71 |
3814 | 4448 | 4.505808 | TGGCTTGCCAAATATTGACAATG | 58.494 | 39.130 | 12.40 | 0.00 | 32.60 | 2.82 |
3815 | 4449 | 4.020396 | TGGCTTGCCAAATATTGACAATGT | 60.020 | 37.500 | 12.40 | 0.81 | 32.60 | 2.71 |
3816 | 4450 | 4.567959 | GGCTTGCCAAATATTGACAATGTC | 59.432 | 41.667 | 11.05 | 6.41 | 32.60 | 3.06 |
3817 | 4451 | 5.170021 | GCTTGCCAAATATTGACAATGTCA | 58.830 | 37.500 | 12.63 | 12.63 | 41.09 | 3.58 |
3835 | 4469 | 5.211174 | TGTCAAATGTTGGCATCAAATCA | 57.789 | 34.783 | 1.83 | 0.00 | 40.96 | 2.57 |
3836 | 4470 | 5.608449 | TGTCAAATGTTGGCATCAAATCAA | 58.392 | 33.333 | 1.83 | 0.00 | 40.96 | 2.57 |
3837 | 4471 | 6.231951 | TGTCAAATGTTGGCATCAAATCAAT | 58.768 | 32.000 | 1.83 | 0.00 | 40.96 | 2.57 |
3838 | 4472 | 6.711194 | TGTCAAATGTTGGCATCAAATCAATT | 59.289 | 30.769 | 1.83 | 0.00 | 40.96 | 2.32 |
3839 | 4473 | 7.876582 | TGTCAAATGTTGGCATCAAATCAATTA | 59.123 | 29.630 | 1.83 | 0.00 | 40.96 | 1.40 |
3840 | 4474 | 8.885722 | GTCAAATGTTGGCATCAAATCAATTAT | 58.114 | 29.630 | 1.83 | 0.00 | 34.79 | 1.28 |
3850 | 4484 | 9.546909 | GGCATCAAATCAATTATATTAGTGTCG | 57.453 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
3867 | 4501 | 9.877178 | ATTAGTGTCGATTCTCTAAGAACAAAT | 57.123 | 29.630 | 0.00 | 0.00 | 37.00 | 2.32 |
3869 | 4503 | 8.690680 | AGTGTCGATTCTCTAAGAACAAATAC | 57.309 | 34.615 | 0.00 | 0.00 | 37.00 | 1.89 |
3870 | 4504 | 8.304596 | AGTGTCGATTCTCTAAGAACAAATACA | 58.695 | 33.333 | 0.00 | 0.00 | 37.00 | 2.29 |
3871 | 4505 | 9.088512 | GTGTCGATTCTCTAAGAACAAATACAT | 57.911 | 33.333 | 0.00 | 0.00 | 37.00 | 2.29 |
3872 | 4506 | 9.653287 | TGTCGATTCTCTAAGAACAAATACATT | 57.347 | 29.630 | 0.00 | 0.00 | 37.00 | 2.71 |
3877 | 4511 | 9.774742 | ATTCTCTAAGAACAAATACATTTTCGC | 57.225 | 29.630 | 0.00 | 0.00 | 37.00 | 4.70 |
3878 | 4512 | 8.317891 | TCTCTAAGAACAAATACATTTTCGCA | 57.682 | 30.769 | 0.00 | 0.00 | 0.00 | 5.10 |
3879 | 4513 | 8.227791 | TCTCTAAGAACAAATACATTTTCGCAC | 58.772 | 33.333 | 0.00 | 0.00 | 0.00 | 5.34 |
3880 | 4514 | 7.302524 | TCTAAGAACAAATACATTTTCGCACC | 58.697 | 34.615 | 0.00 | 0.00 | 0.00 | 5.01 |
3881 | 4515 | 5.446143 | AGAACAAATACATTTTCGCACCA | 57.554 | 34.783 | 0.00 | 0.00 | 0.00 | 4.17 |
3882 | 4516 | 5.837437 | AGAACAAATACATTTTCGCACCAA | 58.163 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
3883 | 4517 | 6.276847 | AGAACAAATACATTTTCGCACCAAA | 58.723 | 32.000 | 0.00 | 0.00 | 0.00 | 3.28 |
3884 | 4518 | 6.928492 | AGAACAAATACATTTTCGCACCAAAT | 59.072 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2 | 3 | 0.941463 | GTCTCTGTATCGGCGGCATG | 60.941 | 60.000 | 10.53 | 0.00 | 0.00 | 4.06 |
14 | 15 | 9.732130 | AGCATATTTTCTAAGAAAAGTCTCTGT | 57.268 | 29.630 | 0.00 | 0.00 | 30.70 | 3.41 |
20 | 21 | 9.994432 | CGATTCAGCATATTTTCTAAGAAAAGT | 57.006 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
35 | 36 | 2.628178 | CTGGACCTACCGATTCAGCATA | 59.372 | 50.000 | 0.00 | 0.00 | 42.61 | 3.14 |
37 | 38 | 0.824109 | CTGGACCTACCGATTCAGCA | 59.176 | 55.000 | 0.00 | 0.00 | 42.61 | 4.41 |
66 | 68 | 8.303876 | ACGCAAAAATACAGGTAGATTTGATTT | 58.696 | 29.630 | 17.10 | 0.00 | 31.62 | 2.17 |
67 | 69 | 7.826690 | ACGCAAAAATACAGGTAGATTTGATT | 58.173 | 30.769 | 17.10 | 6.12 | 31.62 | 2.57 |
68 | 70 | 7.391148 | ACGCAAAAATACAGGTAGATTTGAT | 57.609 | 32.000 | 17.10 | 7.16 | 31.62 | 2.57 |
69 | 71 | 6.811253 | ACGCAAAAATACAGGTAGATTTGA | 57.189 | 33.333 | 17.10 | 0.00 | 31.62 | 2.69 |
70 | 72 | 7.867445 | AAACGCAAAAATACAGGTAGATTTG | 57.133 | 32.000 | 12.03 | 12.03 | 32.41 | 2.32 |
133 | 135 | 7.325660 | TGCAGGCTTAATAAGATGAGAAAAG | 57.674 | 36.000 | 3.88 | 0.00 | 0.00 | 2.27 |
145 | 147 | 4.457603 | ACAACGACAATTGCAGGCTTAATA | 59.542 | 37.500 | 5.05 | 0.00 | 32.47 | 0.98 |
146 | 148 | 3.255642 | ACAACGACAATTGCAGGCTTAAT | 59.744 | 39.130 | 5.05 | 0.00 | 32.47 | 1.40 |
147 | 149 | 2.621055 | ACAACGACAATTGCAGGCTTAA | 59.379 | 40.909 | 5.05 | 0.00 | 32.47 | 1.85 |
148 | 150 | 2.225491 | GACAACGACAATTGCAGGCTTA | 59.775 | 45.455 | 5.05 | 0.00 | 32.47 | 3.09 |
253 | 255 | 2.231478 | TGTCTAAAGTTCTGCTCTCGGG | 59.769 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
258 | 260 | 6.734104 | ATGACATTGTCTAAAGTTCTGCTC | 57.266 | 37.500 | 17.26 | 0.00 | 33.15 | 4.26 |
311 | 313 | 3.957671 | ATGTAGACGAGCGAATACGAA | 57.042 | 42.857 | 0.00 | 0.00 | 42.66 | 3.85 |
312 | 314 | 3.957671 | AATGTAGACGAGCGAATACGA | 57.042 | 42.857 | 0.00 | 0.00 | 42.66 | 3.43 |
313 | 315 | 4.085721 | GGAAAATGTAGACGAGCGAATACG | 60.086 | 45.833 | 0.00 | 0.00 | 42.93 | 3.06 |
323 | 333 | 8.029642 | ACAAAACTATCAGGAAAATGTAGACG | 57.970 | 34.615 | 0.00 | 0.00 | 0.00 | 4.18 |
333 | 343 | 9.567776 | TCTTTCAACATACAAAACTATCAGGAA | 57.432 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
361 | 371 | 3.358707 | ACGGAAACTTTTAAAAGCCGG | 57.641 | 42.857 | 31.29 | 23.33 | 40.87 | 6.13 |
365 | 375 | 6.046885 | TCGGTGTACGGAAACTTTTAAAAG | 57.953 | 37.500 | 23.38 | 23.38 | 44.45 | 2.27 |
379 | 390 | 1.418342 | CCGCATTCCTTCGGTGTACG | 61.418 | 60.000 | 0.00 | 0.00 | 46.11 | 3.67 |
385 | 396 | 0.958382 | TTTGACCCGCATTCCTTCGG | 60.958 | 55.000 | 0.00 | 0.00 | 44.89 | 4.30 |
431 | 442 | 4.012374 | AGAATGTTTGTAGGCATGGACAG | 58.988 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
432 | 443 | 4.032960 | AGAATGTTTGTAGGCATGGACA | 57.967 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
443 | 454 | 2.556189 | TGCCGTGCATTAGAATGTTTGT | 59.444 | 40.909 | 4.27 | 0.00 | 38.65 | 2.83 |
446 | 457 | 2.436417 | AGTGCCGTGCATTAGAATGTT | 58.564 | 42.857 | 4.27 | 0.00 | 41.91 | 2.71 |
464 | 475 | 5.132312 | TCACAGGTATGGCTAGAGTAGTAGT | 59.868 | 44.000 | 0.00 | 0.00 | 0.00 | 2.73 |
496 | 511 | 5.957798 | AGAAACACATGGCATATGAACAAG | 58.042 | 37.500 | 13.59 | 4.33 | 0.00 | 3.16 |
514 | 529 | 6.706270 | TGACAAAAGATCCAGACACTAGAAAC | 59.294 | 38.462 | 0.00 | 0.00 | 0.00 | 2.78 |
523 | 538 | 4.326826 | TGTCCATGACAAAAGATCCAGAC | 58.673 | 43.478 | 0.00 | 0.00 | 39.78 | 3.51 |
578 | 597 | 7.966753 | GTCGGTTAACCAAATTTTAAGAGGATC | 59.033 | 37.037 | 24.14 | 1.24 | 35.14 | 3.36 |
669 | 1008 | 1.790387 | CAAAGGCTAGTCGCACTGC | 59.210 | 57.895 | 0.00 | 0.00 | 41.67 | 4.40 |
717 | 1064 | 6.509418 | TGCGAGAATTTTGCCTTAACTAAT | 57.491 | 33.333 | 0.00 | 0.00 | 35.11 | 1.73 |
747 | 1094 | 4.733405 | CACCTTCGCTTTAACTGTGTTTTC | 59.267 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
751 | 1098 | 2.612212 | CACACCTTCGCTTTAACTGTGT | 59.388 | 45.455 | 0.00 | 0.00 | 36.00 | 3.72 |
752 | 1099 | 2.612212 | ACACACCTTCGCTTTAACTGTG | 59.388 | 45.455 | 0.00 | 0.00 | 34.90 | 3.66 |
754 | 1101 | 4.510340 | AGTTACACACCTTCGCTTTAACTG | 59.490 | 41.667 | 0.00 | 0.00 | 29.35 | 3.16 |
757 | 1104 | 4.695396 | TCAGTTACACACCTTCGCTTTAA | 58.305 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
786 | 1133 | 2.608752 | CCAGCAACAGCATCAACTTTCC | 60.609 | 50.000 | 0.00 | 0.00 | 0.00 | 3.13 |
787 | 1134 | 2.294233 | TCCAGCAACAGCATCAACTTTC | 59.706 | 45.455 | 0.00 | 0.00 | 0.00 | 2.62 |
806 | 1160 | 2.646175 | TACTCCTGCCTGCGTGTCC | 61.646 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
807 | 1161 | 1.446272 | GTACTCCTGCCTGCGTGTC | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
813 | 1167 | 3.197766 | TGGATACTTTGTACTCCTGCCTG | 59.802 | 47.826 | 0.00 | 0.00 | 37.61 | 4.85 |
817 | 1171 | 3.430374 | CCCGTGGATACTTTGTACTCCTG | 60.430 | 52.174 | 0.00 | 0.00 | 37.61 | 3.86 |
825 | 1179 | 0.533491 | TCCGTCCCGTGGATACTTTG | 59.467 | 55.000 | 0.00 | 0.00 | 32.73 | 2.77 |
850 | 1204 | 2.713877 | GCCCGTGTTAATTACCTTCCA | 58.286 | 47.619 | 0.00 | 0.00 | 0.00 | 3.53 |
854 | 1208 | 0.745486 | GCCGCCCGTGTTAATTACCT | 60.745 | 55.000 | 0.00 | 0.00 | 0.00 | 3.08 |
875 | 1229 | 4.100084 | TCCATCAGCGCACCCCAG | 62.100 | 66.667 | 11.47 | 0.00 | 0.00 | 4.45 |
876 | 1230 | 4.408821 | GTCCATCAGCGCACCCCA | 62.409 | 66.667 | 11.47 | 0.00 | 0.00 | 4.96 |
877 | 1231 | 4.408821 | TGTCCATCAGCGCACCCC | 62.409 | 66.667 | 11.47 | 0.00 | 0.00 | 4.95 |
878 | 1232 | 3.127533 | GTGTCCATCAGCGCACCC | 61.128 | 66.667 | 11.47 | 0.00 | 0.00 | 4.61 |
879 | 1233 | 2.358615 | TGTGTCCATCAGCGCACC | 60.359 | 61.111 | 11.47 | 0.00 | 0.00 | 5.01 |
880 | 1234 | 3.031964 | GCTGTGTCCATCAGCGCAC | 62.032 | 63.158 | 11.47 | 0.00 | 46.39 | 5.34 |
881 | 1235 | 2.743538 | GCTGTGTCCATCAGCGCA | 60.744 | 61.111 | 11.47 | 0.00 | 46.39 | 6.09 |
900 | 1254 | 0.948678 | CGGGATGGTTTTGTCGTTGT | 59.051 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
923 | 1278 | 4.024387 | TGCCGTTTACAATTGACAGTTCTC | 60.024 | 41.667 | 13.59 | 0.00 | 0.00 | 2.87 |
928 | 1283 | 2.351350 | GGGTGCCGTTTACAATTGACAG | 60.351 | 50.000 | 13.59 | 0.00 | 0.00 | 3.51 |
932 | 1287 | 1.201414 | GAGGGGTGCCGTTTACAATTG | 59.799 | 52.381 | 3.24 | 3.24 | 0.00 | 2.32 |
979 | 1352 | 4.489771 | ATTTGGGAGGCTCGGCGG | 62.490 | 66.667 | 7.21 | 0.00 | 0.00 | 6.13 |
981 | 1354 | 2.517166 | GGATTTGGGAGGCTCGGC | 60.517 | 66.667 | 8.69 | 0.00 | 0.00 | 5.54 |
982 | 1355 | 2.193248 | GGGATTTGGGAGGCTCGG | 59.807 | 66.667 | 8.69 | 0.00 | 0.00 | 4.63 |
1021 | 1394 | 0.250597 | GAGGCGGGTAGTGTTTGGTT | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1027 | 1400 | 1.751927 | CTACGGAGGCGGGTAGTGT | 60.752 | 63.158 | 0.00 | 0.00 | 33.18 | 3.55 |
1064 | 1437 | 1.528309 | GAGAGAGAGAGGGGGAGCG | 60.528 | 68.421 | 0.00 | 0.00 | 0.00 | 5.03 |
1065 | 1438 | 0.261696 | AAGAGAGAGAGAGGGGGAGC | 59.738 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
1066 | 1439 | 1.133482 | GGAAGAGAGAGAGAGGGGGAG | 60.133 | 61.905 | 0.00 | 0.00 | 0.00 | 4.30 |
1067 | 1440 | 0.930726 | GGAAGAGAGAGAGAGGGGGA | 59.069 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1068 | 1441 | 0.105709 | GGGAAGAGAGAGAGAGGGGG | 60.106 | 65.000 | 0.00 | 0.00 | 0.00 | 5.40 |
1074 | 1451 | 2.015227 | GCTGCGGGGAAGAGAGAGAG | 62.015 | 65.000 | 0.00 | 0.00 | 0.00 | 3.20 |
1097 | 1474 | 1.106944 | ACGCAGTTCAGTTTTGGGGG | 61.107 | 55.000 | 0.00 | 0.00 | 37.78 | 5.40 |
1098 | 1475 | 1.265905 | GTACGCAGTTCAGTTTTGGGG | 59.734 | 52.381 | 0.00 | 0.00 | 37.78 | 4.96 |
1099 | 1476 | 2.218603 | AGTACGCAGTTCAGTTTTGGG | 58.781 | 47.619 | 0.00 | 0.00 | 37.78 | 4.12 |
1108 | 1485 | 2.260481 | GCCTACTCAAGTACGCAGTTC | 58.740 | 52.381 | 6.36 | 0.00 | 37.78 | 3.01 |
1173 | 1699 | 4.759893 | CGCTCGTGCAGTTTCGCG | 62.760 | 66.667 | 10.43 | 0.00 | 40.91 | 5.87 |
1261 | 1798 | 2.933287 | AAGGGGGCGGTGATGACA | 60.933 | 61.111 | 0.00 | 0.00 | 0.00 | 3.58 |
1837 | 2374 | 1.305718 | GAGGAGGAGGTCAGGCAGT | 60.306 | 63.158 | 0.00 | 0.00 | 0.00 | 4.40 |
1880 | 2417 | 3.512033 | GGACTGCATCCGGAGATATAC | 57.488 | 52.381 | 11.34 | 0.00 | 37.88 | 1.47 |
1984 | 2521 | 3.382832 | ACTCCCTTGACGCCGAGG | 61.383 | 66.667 | 0.00 | 0.00 | 42.60 | 4.63 |
2854 | 3406 | 0.529337 | CATTCGGCTGCTCGATGTCT | 60.529 | 55.000 | 12.63 | 0.00 | 39.03 | 3.41 |
2872 | 3424 | 3.445805 | TGTGTAGCTATCAACACCGATCA | 59.554 | 43.478 | 13.56 | 0.00 | 44.29 | 2.92 |
3057 | 3635 | 7.323052 | AGTAGATATTTTCCCCATCTTCTCC | 57.677 | 40.000 | 0.00 | 0.00 | 31.60 | 3.71 |
3116 | 3741 | 4.134563 | TCAAAACTTCCTTCCTTCCTTCG | 58.865 | 43.478 | 0.00 | 0.00 | 0.00 | 3.79 |
3159 | 3784 | 1.377333 | CGAAAGGGAAGCAGGGGAC | 60.377 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
3160 | 3785 | 3.077907 | CGAAAGGGAAGCAGGGGA | 58.922 | 61.111 | 0.00 | 0.00 | 0.00 | 4.81 |
3161 | 3786 | 2.751837 | GCGAAAGGGAAGCAGGGG | 60.752 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
3162 | 3787 | 1.303643 | AAGCGAAAGGGAAGCAGGG | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 4.45 |
3265 | 3898 | 3.047877 | CCACGCGACTTTGGACCC | 61.048 | 66.667 | 15.93 | 0.00 | 34.46 | 4.46 |
3270 | 3903 | 1.507141 | AAGGAAGCCACGCGACTTTG | 61.507 | 55.000 | 15.93 | 0.00 | 0.00 | 2.77 |
3290 | 3923 | 2.355599 | CTGCGGGATGCTCTAGCG | 60.356 | 66.667 | 0.00 | 0.00 | 46.63 | 4.26 |
3325 | 3958 | 3.687321 | ATGGCTGACGGCTGCGATT | 62.687 | 57.895 | 14.45 | 0.00 | 41.46 | 3.34 |
3418 | 4052 | 3.420576 | CCACAAATCACGTTGTTTTAGCG | 59.579 | 43.478 | 0.00 | 0.00 | 39.73 | 4.26 |
3419 | 4053 | 4.602995 | TCCACAAATCACGTTGTTTTAGC | 58.397 | 39.130 | 0.00 | 0.00 | 39.73 | 3.09 |
3420 | 4054 | 5.816919 | ACTCCACAAATCACGTTGTTTTAG | 58.183 | 37.500 | 0.00 | 0.00 | 39.73 | 1.85 |
3421 | 4055 | 5.821516 | ACTCCACAAATCACGTTGTTTTA | 57.178 | 34.783 | 0.00 | 0.00 | 39.73 | 1.52 |
3422 | 4056 | 4.712122 | ACTCCACAAATCACGTTGTTTT | 57.288 | 36.364 | 0.00 | 0.00 | 39.73 | 2.43 |
3425 | 4059 | 3.250040 | GCTTACTCCACAAATCACGTTGT | 59.750 | 43.478 | 0.00 | 0.00 | 42.48 | 3.32 |
3427 | 4061 | 2.478894 | CGCTTACTCCACAAATCACGTT | 59.521 | 45.455 | 0.00 | 0.00 | 0.00 | 3.99 |
3459 | 4093 | 5.434352 | TCTTGCTATACTCCGTACATGTC | 57.566 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
3489 | 4123 | 3.198200 | TGCTATACTCTACCCCGCAAAAA | 59.802 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
3490 | 4124 | 2.767394 | TGCTATACTCTACCCCGCAAAA | 59.233 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
3491 | 4125 | 2.390696 | TGCTATACTCTACCCCGCAAA | 58.609 | 47.619 | 0.00 | 0.00 | 0.00 | 3.68 |
3492 | 4126 | 2.076207 | TGCTATACTCTACCCCGCAA | 57.924 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3493 | 4127 | 1.961394 | CTTGCTATACTCTACCCCGCA | 59.039 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
3494 | 4128 | 2.236766 | TCTTGCTATACTCTACCCCGC | 58.763 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
3495 | 4129 | 4.337145 | AGATCTTGCTATACTCTACCCCG | 58.663 | 47.826 | 0.00 | 0.00 | 0.00 | 5.73 |
3496 | 4130 | 7.670559 | TCTTTAGATCTTGCTATACTCTACCCC | 59.329 | 40.741 | 0.00 | 0.00 | 0.00 | 4.95 |
3497 | 4131 | 8.638629 | TCTTTAGATCTTGCTATACTCTACCC | 57.361 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
3498 | 4132 | 9.292195 | ACTCTTTAGATCTTGCTATACTCTACC | 57.708 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
3501 | 4135 | 8.988546 | TCACTCTTTAGATCTTGCTATACTCT | 57.011 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
3515 | 4149 | 9.998106 | GCATAGGGTAATAAATCACTCTTTAGA | 57.002 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
3516 | 4150 | 9.778741 | TGCATAGGGTAATAAATCACTCTTTAG | 57.221 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
3520 | 4154 | 9.726438 | GTTATGCATAGGGTAATAAATCACTCT | 57.274 | 33.333 | 6.50 | 0.00 | 0.00 | 3.24 |
3521 | 4155 | 8.947115 | GGTTATGCATAGGGTAATAAATCACTC | 58.053 | 37.037 | 6.50 | 0.00 | 0.00 | 3.51 |
3522 | 4156 | 7.606456 | CGGTTATGCATAGGGTAATAAATCACT | 59.394 | 37.037 | 6.50 | 0.00 | 0.00 | 3.41 |
3523 | 4157 | 7.389607 | ACGGTTATGCATAGGGTAATAAATCAC | 59.610 | 37.037 | 6.50 | 0.00 | 0.00 | 3.06 |
3524 | 4158 | 7.455058 | ACGGTTATGCATAGGGTAATAAATCA | 58.545 | 34.615 | 6.50 | 0.00 | 0.00 | 2.57 |
3525 | 4159 | 7.604927 | TGACGGTTATGCATAGGGTAATAAATC | 59.395 | 37.037 | 6.50 | 0.00 | 0.00 | 2.17 |
3526 | 4160 | 7.455058 | TGACGGTTATGCATAGGGTAATAAAT | 58.545 | 34.615 | 6.50 | 0.00 | 0.00 | 1.40 |
3527 | 4161 | 6.828788 | TGACGGTTATGCATAGGGTAATAAA | 58.171 | 36.000 | 6.50 | 0.00 | 0.00 | 1.40 |
3528 | 4162 | 6.422344 | TGACGGTTATGCATAGGGTAATAA | 57.578 | 37.500 | 6.50 | 0.00 | 0.00 | 1.40 |
3529 | 4163 | 5.046878 | CCTGACGGTTATGCATAGGGTAATA | 60.047 | 44.000 | 6.50 | 0.00 | 0.00 | 0.98 |
3530 | 4164 | 4.262894 | CCTGACGGTTATGCATAGGGTAAT | 60.263 | 45.833 | 6.50 | 0.00 | 0.00 | 1.89 |
3531 | 4165 | 3.070446 | CCTGACGGTTATGCATAGGGTAA | 59.930 | 47.826 | 6.50 | 0.00 | 0.00 | 2.85 |
3532 | 4166 | 2.631062 | CCTGACGGTTATGCATAGGGTA | 59.369 | 50.000 | 6.50 | 0.00 | 0.00 | 3.69 |
3533 | 4167 | 1.416401 | CCTGACGGTTATGCATAGGGT | 59.584 | 52.381 | 6.50 | 6.32 | 0.00 | 4.34 |
3534 | 4168 | 1.691976 | TCCTGACGGTTATGCATAGGG | 59.308 | 52.381 | 6.50 | 3.15 | 0.00 | 3.53 |
3535 | 4169 | 3.685139 | ATCCTGACGGTTATGCATAGG | 57.315 | 47.619 | 6.50 | 4.80 | 0.00 | 2.57 |
3536 | 4170 | 5.184096 | ACTCTATCCTGACGGTTATGCATAG | 59.816 | 44.000 | 6.50 | 0.00 | 0.00 | 2.23 |
3537 | 4171 | 5.077564 | ACTCTATCCTGACGGTTATGCATA | 58.922 | 41.667 | 1.16 | 1.16 | 0.00 | 3.14 |
3538 | 4172 | 3.898123 | ACTCTATCCTGACGGTTATGCAT | 59.102 | 43.478 | 3.79 | 3.79 | 0.00 | 3.96 |
3539 | 4173 | 3.296854 | ACTCTATCCTGACGGTTATGCA | 58.703 | 45.455 | 0.00 | 0.00 | 0.00 | 3.96 |
3540 | 4174 | 4.323553 | AACTCTATCCTGACGGTTATGC | 57.676 | 45.455 | 0.00 | 0.00 | 0.00 | 3.14 |
3541 | 4175 | 7.273320 | TCTTAACTCTATCCTGACGGTTATG | 57.727 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
3542 | 4176 | 7.893124 | TTCTTAACTCTATCCTGACGGTTAT | 57.107 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3543 | 4177 | 7.707624 | TTTCTTAACTCTATCCTGACGGTTA | 57.292 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3544 | 4178 | 6.600882 | TTTCTTAACTCTATCCTGACGGTT | 57.399 | 37.500 | 0.00 | 0.00 | 0.00 | 4.44 |
3545 | 4179 | 6.210984 | ACTTTTCTTAACTCTATCCTGACGGT | 59.789 | 38.462 | 0.00 | 0.00 | 0.00 | 4.83 |
3546 | 4180 | 6.631962 | ACTTTTCTTAACTCTATCCTGACGG | 58.368 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3547 | 4181 | 7.428761 | CGTACTTTTCTTAACTCTATCCTGACG | 59.571 | 40.741 | 0.00 | 0.00 | 0.00 | 4.35 |
3548 | 4182 | 8.242739 | ACGTACTTTTCTTAACTCTATCCTGAC | 58.757 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
3549 | 4183 | 8.345724 | ACGTACTTTTCTTAACTCTATCCTGA | 57.654 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
3550 | 4184 | 8.983307 | AACGTACTTTTCTTAACTCTATCCTG | 57.017 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
3551 | 4185 | 9.993454 | AAAACGTACTTTTCTTAACTCTATCCT | 57.007 | 29.630 | 0.00 | 0.00 | 0.00 | 3.24 |
3565 | 4199 | 8.894864 | GCAATCGTGTAATAAAAACGTACTTTT | 58.105 | 29.630 | 3.64 | 3.64 | 38.43 | 2.27 |
3566 | 4200 | 8.284693 | AGCAATCGTGTAATAAAAACGTACTTT | 58.715 | 29.630 | 0.00 | 0.00 | 38.43 | 2.66 |
3567 | 4201 | 7.799784 | AGCAATCGTGTAATAAAAACGTACTT | 58.200 | 30.769 | 0.00 | 0.00 | 38.43 | 2.24 |
3568 | 4202 | 7.355332 | AGCAATCGTGTAATAAAAACGTACT | 57.645 | 32.000 | 0.00 | 0.00 | 38.43 | 2.73 |
3569 | 4203 | 6.679919 | GGAGCAATCGTGTAATAAAAACGTAC | 59.320 | 38.462 | 0.00 | 0.00 | 38.43 | 3.67 |
3570 | 4204 | 6.454054 | CGGAGCAATCGTGTAATAAAAACGTA | 60.454 | 38.462 | 0.00 | 0.00 | 38.43 | 3.57 |
3571 | 4205 | 5.624292 | GGAGCAATCGTGTAATAAAAACGT | 58.376 | 37.500 | 0.00 | 0.00 | 38.43 | 3.99 |
3572 | 4206 | 4.721977 | CGGAGCAATCGTGTAATAAAAACG | 59.278 | 41.667 | 0.00 | 0.00 | 38.64 | 3.60 |
3573 | 4207 | 5.731263 | GTCGGAGCAATCGTGTAATAAAAAC | 59.269 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3574 | 4208 | 5.408909 | TGTCGGAGCAATCGTGTAATAAAAA | 59.591 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
3575 | 4209 | 4.930405 | TGTCGGAGCAATCGTGTAATAAAA | 59.070 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
3576 | 4210 | 4.496360 | TGTCGGAGCAATCGTGTAATAAA | 58.504 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
3577 | 4211 | 4.112716 | TGTCGGAGCAATCGTGTAATAA | 57.887 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
3578 | 4212 | 3.786516 | TGTCGGAGCAATCGTGTAATA | 57.213 | 42.857 | 0.00 | 0.00 | 0.00 | 0.98 |
3579 | 4213 | 2.665649 | TGTCGGAGCAATCGTGTAAT | 57.334 | 45.000 | 0.00 | 0.00 | 0.00 | 1.89 |
3580 | 4214 | 2.665649 | ATGTCGGAGCAATCGTGTAA | 57.334 | 45.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3581 | 4215 | 2.665649 | AATGTCGGAGCAATCGTGTA | 57.334 | 45.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3582 | 4216 | 1.464608 | CAAATGTCGGAGCAATCGTGT | 59.535 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
3583 | 4217 | 1.791555 | GCAAATGTCGGAGCAATCGTG | 60.792 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
3584 | 4218 | 0.447801 | GCAAATGTCGGAGCAATCGT | 59.552 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
3585 | 4219 | 0.729116 | AGCAAATGTCGGAGCAATCG | 59.271 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
3586 | 4220 | 1.064654 | GGAGCAAATGTCGGAGCAATC | 59.935 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
3587 | 4221 | 1.098050 | GGAGCAAATGTCGGAGCAAT | 58.902 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
3588 | 4222 | 0.036732 | AGGAGCAAATGTCGGAGCAA | 59.963 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3589 | 4223 | 0.901827 | TAGGAGCAAATGTCGGAGCA | 59.098 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3590 | 4224 | 1.134670 | AGTAGGAGCAAATGTCGGAGC | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
3591 | 4225 | 2.969628 | AGTAGGAGCAAATGTCGGAG | 57.030 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3592 | 4226 | 3.958147 | TCATAGTAGGAGCAAATGTCGGA | 59.042 | 43.478 | 0.00 | 0.00 | 0.00 | 4.55 |
3593 | 4227 | 4.322080 | TCATAGTAGGAGCAAATGTCGG | 57.678 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
3594 | 4228 | 6.851222 | AAATCATAGTAGGAGCAAATGTCG | 57.149 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
3595 | 4229 | 7.224753 | TCGAAAATCATAGTAGGAGCAAATGTC | 59.775 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
3596 | 4230 | 7.047891 | TCGAAAATCATAGTAGGAGCAAATGT | 58.952 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
3597 | 4231 | 7.482654 | TCGAAAATCATAGTAGGAGCAAATG | 57.517 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3598 | 4232 | 7.987458 | TCTTCGAAAATCATAGTAGGAGCAAAT | 59.013 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
3599 | 4233 | 7.327975 | TCTTCGAAAATCATAGTAGGAGCAAA | 58.672 | 34.615 | 0.00 | 0.00 | 0.00 | 3.68 |
3600 | 4234 | 6.873997 | TCTTCGAAAATCATAGTAGGAGCAA | 58.126 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3601 | 4235 | 6.465439 | TCTTCGAAAATCATAGTAGGAGCA | 57.535 | 37.500 | 0.00 | 0.00 | 0.00 | 4.26 |
3602 | 4236 | 7.772332 | TTTCTTCGAAAATCATAGTAGGAGC | 57.228 | 36.000 | 0.00 | 0.00 | 0.00 | 4.70 |
3626 | 4260 | 7.566760 | TGACAGGATAATATCGCATGTTTTT | 57.433 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
3627 | 4261 | 6.293626 | GCTGACAGGATAATATCGCATGTTTT | 60.294 | 38.462 | 4.26 | 0.00 | 0.00 | 2.43 |
3628 | 4262 | 5.180117 | GCTGACAGGATAATATCGCATGTTT | 59.820 | 40.000 | 4.26 | 0.00 | 0.00 | 2.83 |
3629 | 4263 | 4.692625 | GCTGACAGGATAATATCGCATGTT | 59.307 | 41.667 | 4.26 | 0.00 | 0.00 | 2.71 |
3630 | 4264 | 4.020751 | AGCTGACAGGATAATATCGCATGT | 60.021 | 41.667 | 4.26 | 4.71 | 0.00 | 3.21 |
3631 | 4265 | 4.502016 | AGCTGACAGGATAATATCGCATG | 58.498 | 43.478 | 4.26 | 0.00 | 0.00 | 4.06 |
3632 | 4266 | 4.815533 | AGCTGACAGGATAATATCGCAT | 57.184 | 40.909 | 4.26 | 0.00 | 0.00 | 4.73 |
3633 | 4267 | 5.722021 | TTAGCTGACAGGATAATATCGCA | 57.278 | 39.130 | 4.26 | 0.00 | 0.00 | 5.10 |
3634 | 4268 | 6.333416 | TCATTAGCTGACAGGATAATATCGC | 58.667 | 40.000 | 4.26 | 0.00 | 0.00 | 4.58 |
3635 | 4269 | 8.651588 | GTTTCATTAGCTGACAGGATAATATCG | 58.348 | 37.037 | 4.26 | 0.00 | 32.17 | 2.92 |
3636 | 4270 | 9.717942 | AGTTTCATTAGCTGACAGGATAATATC | 57.282 | 33.333 | 4.26 | 0.00 | 32.17 | 1.63 |
3637 | 4271 | 9.717942 | GAGTTTCATTAGCTGACAGGATAATAT | 57.282 | 33.333 | 4.26 | 0.00 | 32.17 | 1.28 |
3638 | 4272 | 8.704668 | TGAGTTTCATTAGCTGACAGGATAATA | 58.295 | 33.333 | 4.26 | 0.00 | 32.17 | 0.98 |
3639 | 4273 | 7.568349 | TGAGTTTCATTAGCTGACAGGATAAT | 58.432 | 34.615 | 4.26 | 0.00 | 32.17 | 1.28 |
3640 | 4274 | 6.946340 | TGAGTTTCATTAGCTGACAGGATAA | 58.054 | 36.000 | 4.26 | 0.00 | 32.17 | 1.75 |
3641 | 4275 | 6.381133 | TCTGAGTTTCATTAGCTGACAGGATA | 59.619 | 38.462 | 4.26 | 0.00 | 32.17 | 2.59 |
3642 | 4276 | 5.188555 | TCTGAGTTTCATTAGCTGACAGGAT | 59.811 | 40.000 | 4.26 | 0.00 | 32.17 | 3.24 |
3643 | 4277 | 4.528206 | TCTGAGTTTCATTAGCTGACAGGA | 59.472 | 41.667 | 4.26 | 0.00 | 32.17 | 3.86 |
3644 | 4278 | 4.825422 | TCTGAGTTTCATTAGCTGACAGG | 58.175 | 43.478 | 4.26 | 0.00 | 32.17 | 4.00 |
3645 | 4279 | 4.329528 | GCTCTGAGTTTCATTAGCTGACAG | 59.670 | 45.833 | 6.53 | 0.00 | 34.41 | 3.51 |
3646 | 4280 | 4.248859 | GCTCTGAGTTTCATTAGCTGACA | 58.751 | 43.478 | 6.53 | 0.00 | 34.41 | 3.58 |
3647 | 4281 | 4.248859 | TGCTCTGAGTTTCATTAGCTGAC | 58.751 | 43.478 | 6.53 | 0.00 | 36.68 | 3.51 |
3648 | 4282 | 4.541973 | TGCTCTGAGTTTCATTAGCTGA | 57.458 | 40.909 | 6.53 | 0.00 | 36.68 | 4.26 |
3649 | 4283 | 4.874396 | TCATGCTCTGAGTTTCATTAGCTG | 59.126 | 41.667 | 6.53 | 9.09 | 36.68 | 4.24 |
3650 | 4284 | 4.874966 | GTCATGCTCTGAGTTTCATTAGCT | 59.125 | 41.667 | 6.53 | 0.00 | 36.68 | 3.32 |
3651 | 4285 | 4.874966 | AGTCATGCTCTGAGTTTCATTAGC | 59.125 | 41.667 | 6.53 | 6.61 | 33.55 | 3.09 |
3652 | 4286 | 5.293814 | CCAGTCATGCTCTGAGTTTCATTAG | 59.706 | 44.000 | 15.80 | 0.00 | 35.23 | 1.73 |
3653 | 4287 | 5.181009 | CCAGTCATGCTCTGAGTTTCATTA | 58.819 | 41.667 | 15.80 | 0.00 | 35.23 | 1.90 |
3654 | 4288 | 4.008330 | CCAGTCATGCTCTGAGTTTCATT | 58.992 | 43.478 | 15.80 | 0.00 | 35.23 | 2.57 |
3655 | 4289 | 3.008813 | ACCAGTCATGCTCTGAGTTTCAT | 59.991 | 43.478 | 15.80 | 0.00 | 35.23 | 2.57 |
3656 | 4290 | 2.369860 | ACCAGTCATGCTCTGAGTTTCA | 59.630 | 45.455 | 15.80 | 0.00 | 35.23 | 2.69 |
3657 | 4291 | 3.051081 | ACCAGTCATGCTCTGAGTTTC | 57.949 | 47.619 | 15.80 | 0.00 | 35.23 | 2.78 |
3658 | 4292 | 3.406764 | GAACCAGTCATGCTCTGAGTTT | 58.593 | 45.455 | 15.80 | 8.26 | 35.23 | 2.66 |
3659 | 4293 | 2.289945 | GGAACCAGTCATGCTCTGAGTT | 60.290 | 50.000 | 15.80 | 15.96 | 35.23 | 3.01 |
3660 | 4294 | 1.277557 | GGAACCAGTCATGCTCTGAGT | 59.722 | 52.381 | 15.80 | 10.59 | 38.09 | 3.41 |
3661 | 4295 | 1.277273 | TGGAACCAGTCATGCTCTGAG | 59.723 | 52.381 | 15.80 | 0.00 | 33.51 | 3.35 |
3662 | 4296 | 1.351076 | TGGAACCAGTCATGCTCTGA | 58.649 | 50.000 | 15.80 | 0.00 | 35.20 | 3.27 |
3663 | 4297 | 2.014857 | CATGGAACCAGTCATGCTCTG | 58.985 | 52.381 | 9.68 | 9.68 | 35.07 | 3.35 |
3664 | 4298 | 2.414994 | CATGGAACCAGTCATGCTCT | 57.585 | 50.000 | 0.00 | 0.00 | 35.07 | 4.09 |
3668 | 4302 | 1.548081 | TTGGCATGGAACCAGTCATG | 58.452 | 50.000 | 0.00 | 0.00 | 42.47 | 3.07 |
3669 | 4303 | 2.307496 | TTTGGCATGGAACCAGTCAT | 57.693 | 45.000 | 0.00 | 0.00 | 38.73 | 3.06 |
3670 | 4304 | 2.307496 | ATTTGGCATGGAACCAGTCA | 57.693 | 45.000 | 0.00 | 0.00 | 38.73 | 3.41 |
3671 | 4305 | 4.441913 | CCAATATTTGGCATGGAACCAGTC | 60.442 | 45.833 | 0.00 | 0.00 | 45.17 | 3.51 |
3672 | 4306 | 3.451902 | CCAATATTTGGCATGGAACCAGT | 59.548 | 43.478 | 0.00 | 0.00 | 45.17 | 4.00 |
3673 | 4307 | 4.062677 | CCAATATTTGGCATGGAACCAG | 57.937 | 45.455 | 0.00 | 0.00 | 45.17 | 4.00 |
3686 | 4320 | 7.451732 | TGCCAAATATTAGCATGCCAATATTT | 58.548 | 30.769 | 32.95 | 32.95 | 43.26 | 1.40 |
3687 | 4321 | 7.006865 | TGCCAAATATTAGCATGCCAATATT | 57.993 | 32.000 | 27.83 | 27.83 | 38.40 | 1.28 |
3688 | 4322 | 6.608539 | TGCCAAATATTAGCATGCCAATAT | 57.391 | 33.333 | 21.19 | 21.19 | 0.00 | 1.28 |
3689 | 4323 | 6.416631 | TTGCCAAATATTAGCATGCCAATA | 57.583 | 33.333 | 18.78 | 18.78 | 36.20 | 1.90 |
3690 | 4324 | 4.959560 | TGCCAAATATTAGCATGCCAAT | 57.040 | 36.364 | 15.66 | 15.66 | 0.00 | 3.16 |
3691 | 4325 | 4.750021 | TTGCCAAATATTAGCATGCCAA | 57.250 | 36.364 | 15.66 | 7.75 | 36.20 | 4.52 |
3692 | 4326 | 4.750021 | TTTGCCAAATATTAGCATGCCA | 57.250 | 36.364 | 15.66 | 0.00 | 36.20 | 4.92 |
3693 | 4327 | 7.098477 | TGATATTTGCCAAATATTAGCATGCC | 58.902 | 34.615 | 20.54 | 8.56 | 42.53 | 4.40 |
3694 | 4328 | 8.537049 | TTGATATTTGCCAAATATTAGCATGC | 57.463 | 30.769 | 20.54 | 10.51 | 42.53 | 4.06 |
3701 | 4335 | 8.623030 | GCCAACATTTGATATTTGCCAAATATT | 58.377 | 29.630 | 20.54 | 5.44 | 42.53 | 1.28 |
3702 | 4336 | 7.994334 | AGCCAACATTTGATATTTGCCAAATAT | 59.006 | 29.630 | 19.88 | 19.88 | 44.53 | 1.28 |
3703 | 4337 | 7.337167 | AGCCAACATTTGATATTTGCCAAATA | 58.663 | 30.769 | 12.01 | 12.01 | 39.98 | 1.40 |
3704 | 4338 | 6.181908 | AGCCAACATTTGATATTTGCCAAAT | 58.818 | 32.000 | 7.93 | 7.93 | 41.93 | 2.32 |
3705 | 4339 | 5.558818 | AGCCAACATTTGATATTTGCCAAA | 58.441 | 33.333 | 0.00 | 0.00 | 36.80 | 3.28 |
3706 | 4340 | 5.163281 | AGCCAACATTTGATATTTGCCAA | 57.837 | 34.783 | 0.00 | 0.00 | 0.00 | 4.52 |
3707 | 4341 | 4.822685 | AGCCAACATTTGATATTTGCCA | 57.177 | 36.364 | 0.00 | 0.00 | 0.00 | 4.92 |
3708 | 4342 | 5.750067 | CACTAGCCAACATTTGATATTTGCC | 59.250 | 40.000 | 0.00 | 0.00 | 0.00 | 4.52 |
3709 | 4343 | 5.750067 | CCACTAGCCAACATTTGATATTTGC | 59.250 | 40.000 | 0.00 | 0.00 | 0.00 | 3.68 |
3710 | 4344 | 6.866480 | ACCACTAGCCAACATTTGATATTTG | 58.134 | 36.000 | 0.00 | 0.00 | 0.00 | 2.32 |
3711 | 4345 | 7.322664 | CAACCACTAGCCAACATTTGATATTT | 58.677 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
3712 | 4346 | 6.127366 | CCAACCACTAGCCAACATTTGATATT | 60.127 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
3713 | 4347 | 5.360714 | CCAACCACTAGCCAACATTTGATAT | 59.639 | 40.000 | 0.00 | 0.00 | 0.00 | 1.63 |
3714 | 4348 | 4.704540 | CCAACCACTAGCCAACATTTGATA | 59.295 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
3715 | 4349 | 3.511146 | CCAACCACTAGCCAACATTTGAT | 59.489 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3716 | 4350 | 2.890311 | CCAACCACTAGCCAACATTTGA | 59.110 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
3717 | 4351 | 2.627699 | ACCAACCACTAGCCAACATTTG | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
3718 | 4352 | 2.957474 | ACCAACCACTAGCCAACATTT | 58.043 | 42.857 | 0.00 | 0.00 | 0.00 | 2.32 |
3719 | 4353 | 2.627699 | CAACCAACCACTAGCCAACATT | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
3720 | 4354 | 2.158534 | TCAACCAACCACTAGCCAACAT | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
3721 | 4355 | 1.213182 | TCAACCAACCACTAGCCAACA | 59.787 | 47.619 | 0.00 | 0.00 | 0.00 | 3.33 |
3722 | 4356 | 1.607148 | GTCAACCAACCACTAGCCAAC | 59.393 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
3723 | 4357 | 1.493022 | AGTCAACCAACCACTAGCCAA | 59.507 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
3724 | 4358 | 1.136828 | AGTCAACCAACCACTAGCCA | 58.863 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
3725 | 4359 | 2.696506 | GTAGTCAACCAACCACTAGCC | 58.303 | 52.381 | 0.00 | 0.00 | 0.00 | 3.93 |
3738 | 4372 | 7.455641 | TTTGTCAAGAAAAGTTGGTAGTCAA | 57.544 | 32.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3739 | 4373 | 7.455641 | TTTTGTCAAGAAAAGTTGGTAGTCA | 57.544 | 32.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3740 | 4374 | 8.394667 | CTTTTTGTCAAGAAAAGTTGGTAGTC | 57.605 | 34.615 | 2.72 | 0.00 | 38.60 | 2.59 |
3756 | 4390 | 6.857777 | CCAAATATTGGCAACTTTTTGTCA | 57.142 | 33.333 | 20.57 | 0.00 | 45.77 | 3.58 |
3770 | 4404 | 6.621164 | GCCAAGTCAAATGTTGCCAAATATTG | 60.621 | 38.462 | 0.00 | 0.00 | 28.64 | 1.90 |
3771 | 4405 | 5.412286 | GCCAAGTCAAATGTTGCCAAATATT | 59.588 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
3772 | 4406 | 4.937015 | GCCAAGTCAAATGTTGCCAAATAT | 59.063 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
3773 | 4407 | 4.040217 | AGCCAAGTCAAATGTTGCCAAATA | 59.960 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
3774 | 4408 | 3.140623 | GCCAAGTCAAATGTTGCCAAAT | 58.859 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
3775 | 4409 | 2.170187 | AGCCAAGTCAAATGTTGCCAAA | 59.830 | 40.909 | 0.00 | 0.00 | 0.00 | 3.28 |
3776 | 4410 | 1.761784 | AGCCAAGTCAAATGTTGCCAA | 59.238 | 42.857 | 0.00 | 0.00 | 0.00 | 4.52 |
3777 | 4411 | 1.412079 | AGCCAAGTCAAATGTTGCCA | 58.588 | 45.000 | 0.00 | 0.00 | 0.00 | 4.92 |
3778 | 4412 | 2.137523 | CAAGCCAAGTCAAATGTTGCC | 58.862 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
3779 | 4413 | 1.528161 | GCAAGCCAAGTCAAATGTTGC | 59.472 | 47.619 | 0.00 | 0.00 | 32.80 | 4.17 |
3780 | 4414 | 2.137523 | GGCAAGCCAAGTCAAATGTTG | 58.862 | 47.619 | 6.14 | 0.00 | 35.81 | 3.33 |
3781 | 4415 | 1.761784 | TGGCAAGCCAAGTCAAATGTT | 59.238 | 42.857 | 12.11 | 0.00 | 44.12 | 2.71 |
3782 | 4416 | 1.412079 | TGGCAAGCCAAGTCAAATGT | 58.588 | 45.000 | 12.11 | 0.00 | 44.12 | 2.71 |
3806 | 4440 | 8.327965 | TTTGATGCCAACATTTGACATTGTCAA | 61.328 | 33.333 | 24.66 | 24.66 | 42.32 | 3.18 |
3807 | 4441 | 4.038883 | TGATGCCAACATTTGACATTGTCA | 59.961 | 37.500 | 15.41 | 15.41 | 37.43 | 3.58 |
3808 | 4442 | 4.558178 | TGATGCCAACATTTGACATTGTC | 58.442 | 39.130 | 9.93 | 9.93 | 33.73 | 3.18 |
3809 | 4443 | 4.603989 | TGATGCCAACATTTGACATTGT | 57.396 | 36.364 | 0.00 | 0.00 | 33.73 | 2.71 |
3810 | 4444 | 5.926214 | TTTGATGCCAACATTTGACATTG | 57.074 | 34.783 | 0.00 | 0.00 | 33.73 | 2.82 |
3811 | 4445 | 6.231951 | TGATTTGATGCCAACATTTGACATT | 58.768 | 32.000 | 0.00 | 0.00 | 33.73 | 2.71 |
3812 | 4446 | 5.795972 | TGATTTGATGCCAACATTTGACAT | 58.204 | 33.333 | 0.00 | 0.00 | 36.41 | 3.06 |
3813 | 4447 | 5.211174 | TGATTTGATGCCAACATTTGACA | 57.789 | 34.783 | 0.00 | 0.00 | 36.35 | 3.58 |
3814 | 4448 | 6.730960 | ATTGATTTGATGCCAACATTTGAC | 57.269 | 33.333 | 0.00 | 0.00 | 36.35 | 3.18 |
3824 | 4458 | 9.546909 | CGACACTAATATAATTGATTTGATGCC | 57.453 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
3841 | 4475 | 9.877178 | ATTTGTTCTTAGAGAATCGACACTAAT | 57.123 | 29.630 | 0.00 | 0.00 | 42.67 | 1.73 |
3843 | 4477 | 9.784680 | GTATTTGTTCTTAGAGAATCGACACTA | 57.215 | 33.333 | 0.00 | 0.00 | 42.67 | 2.74 |
3844 | 4478 | 8.304596 | TGTATTTGTTCTTAGAGAATCGACACT | 58.695 | 33.333 | 0.00 | 0.00 | 42.67 | 3.55 |
3845 | 4479 | 8.462143 | TGTATTTGTTCTTAGAGAATCGACAC | 57.538 | 34.615 | 0.00 | 0.00 | 42.67 | 3.67 |
3846 | 4480 | 9.653287 | AATGTATTTGTTCTTAGAGAATCGACA | 57.347 | 29.630 | 0.00 | 0.00 | 42.67 | 4.35 |
3851 | 4485 | 9.774742 | GCGAAAATGTATTTGTTCTTAGAGAAT | 57.225 | 29.630 | 0.00 | 0.00 | 36.50 | 2.40 |
3852 | 4486 | 8.779303 | TGCGAAAATGTATTTGTTCTTAGAGAA | 58.221 | 29.630 | 0.00 | 0.00 | 0.00 | 2.87 |
3853 | 4487 | 8.227791 | GTGCGAAAATGTATTTGTTCTTAGAGA | 58.772 | 33.333 | 0.00 | 0.00 | 0.00 | 3.10 |
3854 | 4488 | 7.481798 | GGTGCGAAAATGTATTTGTTCTTAGAG | 59.518 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
3855 | 4489 | 7.041030 | TGGTGCGAAAATGTATTTGTTCTTAGA | 60.041 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
3856 | 4490 | 7.081349 | TGGTGCGAAAATGTATTTGTTCTTAG | 58.919 | 34.615 | 0.00 | 0.00 | 0.00 | 2.18 |
3857 | 4491 | 6.971602 | TGGTGCGAAAATGTATTTGTTCTTA | 58.028 | 32.000 | 0.00 | 0.00 | 0.00 | 2.10 |
3858 | 4492 | 5.837437 | TGGTGCGAAAATGTATTTGTTCTT | 58.163 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
3859 | 4493 | 5.446143 | TGGTGCGAAAATGTATTTGTTCT | 57.554 | 34.783 | 0.00 | 0.00 | 0.00 | 3.01 |
3860 | 4494 | 6.517914 | TTTGGTGCGAAAATGTATTTGTTC | 57.482 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.