Multiple sequence alignment - TraesCS2B01G417500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G417500 chr2B 100.000 2642 0 0 1 2642 597003909 597001268 0.000000e+00 4879
1 TraesCS2B01G417500 chr2B 93.818 275 17 0 2319 2593 672043401 672043675 5.260000e-112 414
2 TraesCS2B01G417500 chr2A 88.889 1035 50 13 773 1765 652571271 652570260 0.000000e+00 1214
3 TraesCS2B01G417500 chr2A 88.525 183 15 5 565 741 652571852 652571670 1.590000e-52 217
4 TraesCS2B01G417500 chr2A 85.350 157 12 4 1827 1972 652570260 652570104 4.550000e-33 152
5 TraesCS2B01G417500 chr2A 78.448 232 26 10 2070 2299 652569074 652568865 2.130000e-26 130
6 TraesCS2B01G417500 chr2D 85.422 1125 73 42 682 1766 508064316 508063243 0.000000e+00 1085
7 TraesCS2B01G417500 chr2D 94.403 268 15 0 2326 2593 102542777 102542510 1.890000e-111 412
8 TraesCS2B01G417500 chr2D 94.403 268 15 0 2326 2593 386133870 386133603 1.890000e-111 412
9 TraesCS2B01G417500 chr2D 90.850 153 13 1 1858 2009 508063203 508063051 1.240000e-48 204
10 TraesCS2B01G417500 chr3A 96.060 533 21 0 1 533 737385811 737385279 0.000000e+00 869
11 TraesCS2B01G417500 chr3A 92.871 533 38 0 1 533 386193386 386193918 0.000000e+00 774
12 TraesCS2B01G417500 chr5B 93.809 533 33 0 1 533 436814473 436813941 0.000000e+00 802
13 TraesCS2B01G417500 chr5B 91.557 533 44 1 1 533 521602798 521602267 0.000000e+00 734
14 TraesCS2B01G417500 chr5B 96.642 268 9 0 2326 2593 382381653 382381386 1.870000e-121 446
15 TraesCS2B01G417500 chr5B 95.522 268 12 0 2326 2593 269929993 269930260 1.880000e-116 429
16 TraesCS2B01G417500 chr5B 95.149 268 13 0 2326 2593 491920796 491920529 8.740000e-115 424
17 TraesCS2B01G417500 chr1B 93.561 528 30 2 9 533 11985747 11986273 0.000000e+00 784
18 TraesCS2B01G417500 chr1B 92.495 533 40 0 1 533 11870128 11869596 0.000000e+00 763
19 TraesCS2B01G417500 chr5D 92.120 533 42 0 1 533 8431537 8432069 0.000000e+00 752
20 TraesCS2B01G417500 chr1D 91.557 533 45 0 1 533 432234790 432235322 0.000000e+00 736
21 TraesCS2B01G417500 chr7A 91.288 528 46 0 1 528 268985611 268986138 0.000000e+00 721
22 TraesCS2B01G417500 chr4B 95.985 274 11 0 2320 2593 672301278 672301005 1.870000e-121 446
23 TraesCS2B01G417500 chr4B 93.972 282 15 2 2313 2593 63293848 63293568 2.430000e-115 425
24 TraesCS2B01G417500 chrUn 94.796 269 11 2 2326 2593 194085027 194084761 1.460000e-112 416


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G417500 chr2B 597001268 597003909 2641 True 4879.00 4879 100.000 1 2642 1 chr2B.!!$R1 2641
1 TraesCS2B01G417500 chr2A 652568865 652571852 2987 True 428.25 1214 85.303 565 2299 4 chr2A.!!$R1 1734
2 TraesCS2B01G417500 chr2D 508063051 508064316 1265 True 644.50 1085 88.136 682 2009 2 chr2D.!!$R3 1327
3 TraesCS2B01G417500 chr3A 737385279 737385811 532 True 869.00 869 96.060 1 533 1 chr3A.!!$R1 532
4 TraesCS2B01G417500 chr3A 386193386 386193918 532 False 774.00 774 92.871 1 533 1 chr3A.!!$F1 532
5 TraesCS2B01G417500 chr5B 436813941 436814473 532 True 802.00 802 93.809 1 533 1 chr5B.!!$R2 532
6 TraesCS2B01G417500 chr5B 521602267 521602798 531 True 734.00 734 91.557 1 533 1 chr5B.!!$R4 532
7 TraesCS2B01G417500 chr1B 11985747 11986273 526 False 784.00 784 93.561 9 533 1 chr1B.!!$F1 524
8 TraesCS2B01G417500 chr1B 11869596 11870128 532 True 763.00 763 92.495 1 533 1 chr1B.!!$R1 532
9 TraesCS2B01G417500 chr5D 8431537 8432069 532 False 752.00 752 92.120 1 533 1 chr5D.!!$F1 532
10 TraesCS2B01G417500 chr1D 432234790 432235322 532 False 736.00 736 91.557 1 533 1 chr1D.!!$F1 532
11 TraesCS2B01G417500 chr7A 268985611 268986138 527 False 721.00 721 91.288 1 528 1 chr7A.!!$F1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
561 565 0.253044 ATGTGATCCAACAGACCCCG 59.747 55.0 0.0 0.0 32.52 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2439 3850 0.030504 TTCGTTGCATGCTTGTGGTG 59.969 50.0 20.33 1.97 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
205 206 4.439305 TGTCCTGAAGCATTGCAATAAC 57.561 40.909 12.53 7.57 0.00 1.89
207 208 5.252547 TGTCCTGAAGCATTGCAATAACTA 58.747 37.500 12.53 0.00 0.00 2.24
261 262 6.110411 TCTACACTAGCCTTAAAAAGCAGT 57.890 37.500 0.00 0.00 0.00 4.40
395 396 5.744171 TGCTGCAATCAAGAATAAGTAGGA 58.256 37.500 0.00 0.00 0.00 2.94
402 403 8.987890 GCAATCAAGAATAAGTAGGAGAAGATC 58.012 37.037 0.00 0.00 0.00 2.75
464 468 5.940470 ACTCGAGCTTCTCACCATTAAAAAT 59.060 36.000 13.61 0.00 0.00 1.82
465 469 6.128172 ACTCGAGCTTCTCACCATTAAAAATG 60.128 38.462 13.61 0.00 0.00 2.32
484 488 7.839680 AAAATGACAGAAAAGGGTACTGAAT 57.160 32.000 0.00 0.00 35.85 2.57
488 492 9.533831 AATGACAGAAAAGGGTACTGAATAAAT 57.466 29.630 0.00 0.00 35.85 1.40
528 532 2.507992 CACTGCCGAGAGAAGCCG 60.508 66.667 0.00 0.00 0.00 5.52
533 537 0.821517 TGCCGAGAGAAGCCGAATTA 59.178 50.000 0.00 0.00 0.00 1.40
534 538 1.412710 TGCCGAGAGAAGCCGAATTAT 59.587 47.619 0.00 0.00 0.00 1.28
535 539 2.626266 TGCCGAGAGAAGCCGAATTATA 59.374 45.455 0.00 0.00 0.00 0.98
536 540 2.987821 GCCGAGAGAAGCCGAATTATAC 59.012 50.000 0.00 0.00 0.00 1.47
537 541 3.305471 GCCGAGAGAAGCCGAATTATACT 60.305 47.826 0.00 0.00 0.00 2.12
538 542 4.230657 CCGAGAGAAGCCGAATTATACTG 58.769 47.826 0.00 0.00 0.00 2.74
539 543 4.261656 CCGAGAGAAGCCGAATTATACTGT 60.262 45.833 0.00 0.00 0.00 3.55
540 544 5.282510 CGAGAGAAGCCGAATTATACTGTT 58.717 41.667 0.00 0.00 0.00 3.16
541 545 6.436261 CGAGAGAAGCCGAATTATACTGTTA 58.564 40.000 0.00 0.00 0.00 2.41
542 546 6.916387 CGAGAGAAGCCGAATTATACTGTTAA 59.084 38.462 0.00 0.00 0.00 2.01
543 547 7.595502 CGAGAGAAGCCGAATTATACTGTTAAT 59.404 37.037 0.00 0.00 0.00 1.40
544 548 8.594881 AGAGAAGCCGAATTATACTGTTAATG 57.405 34.615 0.00 0.00 0.00 1.90
545 549 8.204836 AGAGAAGCCGAATTATACTGTTAATGT 58.795 33.333 0.00 0.00 0.00 2.71
546 550 8.142994 AGAAGCCGAATTATACTGTTAATGTG 57.857 34.615 0.00 0.00 0.00 3.21
547 551 7.985184 AGAAGCCGAATTATACTGTTAATGTGA 59.015 33.333 0.00 0.00 0.00 3.58
548 552 8.677148 AAGCCGAATTATACTGTTAATGTGAT 57.323 30.769 0.00 0.00 0.00 3.06
549 553 8.311650 AGCCGAATTATACTGTTAATGTGATC 57.688 34.615 0.00 0.00 0.00 2.92
550 554 7.387948 AGCCGAATTATACTGTTAATGTGATCC 59.612 37.037 0.00 0.00 0.00 3.36
551 555 7.172532 GCCGAATTATACTGTTAATGTGATCCA 59.827 37.037 0.00 0.00 0.00 3.41
552 556 9.051679 CCGAATTATACTGTTAATGTGATCCAA 57.948 33.333 0.00 0.00 0.00 3.53
553 557 9.864034 CGAATTATACTGTTAATGTGATCCAAC 57.136 33.333 0.00 0.00 0.00 3.77
557 561 7.849804 ATACTGTTAATGTGATCCAACAGAC 57.150 36.000 17.49 8.27 46.94 3.51
558 562 5.003804 ACTGTTAATGTGATCCAACAGACC 58.996 41.667 17.49 0.83 46.94 3.85
559 563 4.331968 TGTTAATGTGATCCAACAGACCC 58.668 43.478 0.00 0.00 32.52 4.46
560 564 2.514458 AATGTGATCCAACAGACCCC 57.486 50.000 0.00 0.00 32.52 4.95
561 565 0.253044 ATGTGATCCAACAGACCCCG 59.747 55.000 0.00 0.00 32.52 5.73
562 566 1.745489 GTGATCCAACAGACCCCGC 60.745 63.158 0.00 0.00 0.00 6.13
563 567 2.511600 GATCCAACAGACCCCGCG 60.512 66.667 0.00 0.00 0.00 6.46
568 572 2.602568 AACAGACCCCGCGGTAGT 60.603 61.111 26.12 21.27 44.88 2.73
581 585 1.002315 GCGGTAGTAACTCCAAACCCA 59.998 52.381 0.00 0.00 0.00 4.51
591 597 2.294074 CTCCAAACCCAGAAACGAACA 58.706 47.619 0.00 0.00 0.00 3.18
592 598 2.685897 CTCCAAACCCAGAAACGAACAA 59.314 45.455 0.00 0.00 0.00 2.83
598 604 2.099098 ACCCAGAAACGAACAAAAGCAG 59.901 45.455 0.00 0.00 0.00 4.24
645 655 3.955101 CGCCGTCGCAACCCAAAA 61.955 61.111 0.00 0.00 34.03 2.44
694 704 4.087892 ATCGCCTTCCGTGCAGCT 62.088 61.111 0.00 0.00 38.35 4.24
711 721 1.163554 GCTTCCAGCTGGTTTGAGAG 58.836 55.000 31.58 19.62 38.45 3.20
733 743 2.225017 CCAACTGAAACACCCCACCTAT 60.225 50.000 0.00 0.00 0.00 2.57
779 789 3.597728 CGAGAGCCTACTCCCGCC 61.598 72.222 0.00 0.00 44.65 6.13
887 1286 1.990327 TCCCATCCATCCATCCATCAG 59.010 52.381 0.00 0.00 0.00 2.90
950 1356 1.118838 CCCAAACTCAAACCAAGCCA 58.881 50.000 0.00 0.00 0.00 4.75
951 1357 1.069049 CCCAAACTCAAACCAAGCCAG 59.931 52.381 0.00 0.00 0.00 4.85
952 1358 1.069049 CCAAACTCAAACCAAGCCAGG 59.931 52.381 0.00 0.00 0.00 4.45
953 1359 0.752658 AAACTCAAACCAAGCCAGGC 59.247 50.000 1.84 1.84 0.00 4.85
954 1360 0.396974 AACTCAAACCAAGCCAGGCA 60.397 50.000 15.80 0.00 0.00 4.75
955 1361 1.109323 ACTCAAACCAAGCCAGGCAC 61.109 55.000 15.80 0.00 0.00 5.01
956 1362 0.825010 CTCAAACCAAGCCAGGCACT 60.825 55.000 15.80 0.00 43.88 4.40
1326 1735 4.090057 GCGTGCCTCAACTTCGCC 62.090 66.667 0.00 0.00 40.83 5.54
1451 1863 1.522569 GGAATGCAGCTACCGAGGT 59.477 57.895 0.00 0.00 0.00 3.85
1543 1955 4.015764 TGGATTGGAATTCGAAATGCAGA 58.984 39.130 17.23 0.68 29.67 4.26
1548 1960 3.623060 TGGAATTCGAAATGCAGAGCTAC 59.377 43.478 2.99 0.00 0.00 3.58
1667 2105 4.162690 GGCCCTGGCGTTCTCGAT 62.163 66.667 1.37 0.00 43.06 3.59
1724 2168 2.740580 CGACCTGTACTTGTGGTGTGTT 60.741 50.000 0.00 0.00 33.74 3.32
1725 2169 2.612212 GACCTGTACTTGTGGTGTGTTG 59.388 50.000 0.00 0.00 33.74 3.33
1726 2170 1.946768 CCTGTACTTGTGGTGTGTTGG 59.053 52.381 0.00 0.00 0.00 3.77
1727 2171 2.639065 CTGTACTTGTGGTGTGTTGGT 58.361 47.619 0.00 0.00 0.00 3.67
1728 2172 2.354510 CTGTACTTGTGGTGTGTTGGTG 59.645 50.000 0.00 0.00 0.00 4.17
1729 2173 2.290387 TGTACTTGTGGTGTGTTGGTGT 60.290 45.455 0.00 0.00 0.00 4.16
1730 2174 1.173043 ACTTGTGGTGTGTTGGTGTG 58.827 50.000 0.00 0.00 0.00 3.82
1731 2175 1.271652 ACTTGTGGTGTGTTGGTGTGA 60.272 47.619 0.00 0.00 0.00 3.58
1732 2176 2.023673 CTTGTGGTGTGTTGGTGTGAT 58.976 47.619 0.00 0.00 0.00 3.06
1733 2177 3.210227 CTTGTGGTGTGTTGGTGTGATA 58.790 45.455 0.00 0.00 0.00 2.15
1734 2178 3.500448 TGTGGTGTGTTGGTGTGATAT 57.500 42.857 0.00 0.00 0.00 1.63
1738 2182 5.127845 TGTGGTGTGTTGGTGTGATATTTTT 59.872 36.000 0.00 0.00 0.00 1.94
1766 2210 6.539826 TGCTATTCTGACGAAAATGTCATGAT 59.460 34.615 0.00 0.00 46.98 2.45
1767 2211 7.710475 TGCTATTCTGACGAAAATGTCATGATA 59.290 33.333 0.00 0.00 46.98 2.15
1768 2212 8.219769 GCTATTCTGACGAAAATGTCATGATAG 58.780 37.037 0.00 15.22 46.98 2.08
1769 2213 9.254133 CTATTCTGACGAAAATGTCATGATAGT 57.746 33.333 0.00 0.00 46.98 2.12
1770 2214 6.892310 TCTGACGAAAATGTCATGATAGTG 57.108 37.500 0.00 0.00 46.98 2.74
1771 2215 6.630071 TCTGACGAAAATGTCATGATAGTGA 58.370 36.000 0.00 0.00 46.98 3.41
1772 2216 6.753744 TCTGACGAAAATGTCATGATAGTGAG 59.246 38.462 0.00 0.00 46.98 3.51
1773 2217 5.291858 TGACGAAAATGTCATGATAGTGAGC 59.708 40.000 0.00 0.00 43.62 4.26
1774 2218 5.178061 ACGAAAATGTCATGATAGTGAGCA 58.822 37.500 0.00 0.00 0.00 4.26
1775 2219 5.063944 ACGAAAATGTCATGATAGTGAGCAC 59.936 40.000 0.00 0.00 0.00 4.40
1776 2220 5.063817 CGAAAATGTCATGATAGTGAGCACA 59.936 40.000 0.00 0.00 0.00 4.57
1777 2221 5.808042 AAATGTCATGATAGTGAGCACAC 57.192 39.130 6.11 6.11 46.24 3.82
1785 2229 3.106407 GTGAGCACACGAGTCCGC 61.106 66.667 0.00 0.00 39.95 5.54
1786 2230 3.601685 TGAGCACACGAGTCCGCA 61.602 61.111 0.00 0.00 39.95 5.69
1787 2231 2.125912 GAGCACACGAGTCCGCAT 60.126 61.111 0.00 0.00 39.95 4.73
1788 2232 1.738099 GAGCACACGAGTCCGCATT 60.738 57.895 0.00 0.00 39.95 3.56
1789 2233 0.457853 GAGCACACGAGTCCGCATTA 60.458 55.000 0.00 0.00 39.95 1.90
1790 2234 0.736325 AGCACACGAGTCCGCATTAC 60.736 55.000 0.00 0.00 39.95 1.89
1791 2235 1.988409 CACACGAGTCCGCATTACG 59.012 57.895 0.00 0.00 39.95 3.18
1804 2248 1.859080 GCATTACGACTTAAGAGGGCG 59.141 52.381 10.09 9.47 0.00 6.13
1805 2249 1.859080 CATTACGACTTAAGAGGGCGC 59.141 52.381 10.09 0.00 0.00 6.53
1806 2250 0.179156 TTACGACTTAAGAGGGCGCG 60.179 55.000 10.09 0.00 0.00 6.86
1807 2251 1.308069 TACGACTTAAGAGGGCGCGT 61.308 55.000 10.09 10.55 0.00 6.01
1808 2252 1.872679 CGACTTAAGAGGGCGCGTC 60.873 63.158 10.09 4.38 0.00 5.19
1809 2253 1.518792 GACTTAAGAGGGCGCGTCC 60.519 63.158 25.39 25.39 0.00 4.79
1810 2254 2.582498 CTTAAGAGGGCGCGTCCG 60.582 66.667 26.29 4.59 34.94 4.79
1811 2255 3.352338 CTTAAGAGGGCGCGTCCGT 62.352 63.158 26.29 18.83 36.67 4.69
1812 2256 2.830704 CTTAAGAGGGCGCGTCCGTT 62.831 60.000 26.29 23.52 36.67 4.44
1813 2257 2.438951 TTAAGAGGGCGCGTCCGTTT 62.439 55.000 26.29 23.69 36.67 3.60
1814 2258 1.594194 TAAGAGGGCGCGTCCGTTTA 61.594 55.000 26.29 22.62 36.67 2.01
1815 2259 3.184003 GAGGGCGCGTCCGTTTAC 61.184 66.667 26.29 10.95 36.67 2.01
1816 2260 3.919973 GAGGGCGCGTCCGTTTACA 62.920 63.158 26.29 0.00 36.67 2.41
1817 2261 3.781162 GGGCGCGTCCGTTTACAC 61.781 66.667 16.93 0.00 36.67 2.90
1818 2262 4.125097 GGCGCGTCCGTTTACACG 62.125 66.667 8.43 0.00 46.71 4.49
1819 2263 3.397317 GCGCGTCCGTTTACACGT 61.397 61.111 8.43 0.00 45.62 4.49
1820 2264 2.930965 GCGCGTCCGTTTACACGTT 61.931 57.895 8.43 0.00 45.62 3.99
1821 2265 1.154980 CGCGTCCGTTTACACGTTG 60.155 57.895 0.00 0.00 45.62 4.10
1822 2266 1.202320 GCGTCCGTTTACACGTTGG 59.798 57.895 0.14 0.00 45.62 3.77
1823 2267 1.214373 GCGTCCGTTTACACGTTGGA 61.214 55.000 0.14 0.00 45.62 3.53
1824 2268 0.503961 CGTCCGTTTACACGTTGGAC 59.496 55.000 0.14 0.55 45.62 4.02
1825 2269 1.569708 GTCCGTTTACACGTTGGACA 58.430 50.000 4.90 0.00 45.62 4.02
1826 2270 1.523934 GTCCGTTTACACGTTGGACAG 59.476 52.381 4.90 0.00 45.62 3.51
1847 2291 2.200899 GCAATGTGGGTCAACAAACAC 58.799 47.619 0.00 0.00 32.81 3.32
1852 2296 3.283751 TGTGGGTCAACAAACACTTAGG 58.716 45.455 0.00 0.00 35.02 2.69
1871 2325 2.823593 CCATTGCACGGGCGATCA 60.824 61.111 10.17 0.00 42.38 2.92
1878 2332 4.856801 ACGGGCGATCATGGCACC 62.857 66.667 0.00 0.00 35.84 5.01
1903 2358 3.695830 ATTCAAGCCTTTACTCGACCA 57.304 42.857 0.00 0.00 0.00 4.02
1911 2366 5.116882 AGCCTTTACTCGACCAATTCATAC 58.883 41.667 0.00 0.00 0.00 2.39
1941 2396 5.240891 TGCTTTGAGATAACTTGGTCAGAG 58.759 41.667 0.00 0.00 0.00 3.35
1942 2397 4.094146 GCTTTGAGATAACTTGGTCAGAGC 59.906 45.833 0.00 0.00 39.21 4.09
1981 2436 1.068194 CGCAGAAGTTTCGAGAGGAGT 60.068 52.381 0.00 0.00 0.00 3.85
2009 3403 1.940613 GTTGTATTCCGGGATGCAGAC 59.059 52.381 13.68 11.06 0.00 3.51
2030 3424 0.668535 AACCAGCGGAAAAAGACAGC 59.331 50.000 1.50 0.00 0.00 4.40
2031 3425 0.465460 ACCAGCGGAAAAAGACAGCA 60.465 50.000 1.50 0.00 0.00 4.41
2035 3429 0.386478 GCGGAAAAAGACAGCAGCAG 60.386 55.000 0.00 0.00 0.00 4.24
2047 3456 3.282021 ACAGCAGCAGAAAAAGACTTGA 58.718 40.909 0.00 0.00 0.00 3.02
2048 3457 3.314635 ACAGCAGCAGAAAAAGACTTGAG 59.685 43.478 0.00 0.00 0.00 3.02
2049 3458 2.292845 AGCAGCAGAAAAAGACTTGAGC 59.707 45.455 0.00 0.00 0.00 4.26
2050 3459 2.292845 GCAGCAGAAAAAGACTTGAGCT 59.707 45.455 0.00 0.00 0.00 4.09
2051 3460 3.886549 CAGCAGAAAAAGACTTGAGCTG 58.113 45.455 0.00 10.92 41.64 4.24
2052 3461 2.292845 AGCAGAAAAAGACTTGAGCTGC 59.707 45.455 20.28 20.28 45.45 5.25
2053 3462 2.606551 GCAGAAAAAGACTTGAGCTGCC 60.607 50.000 18.46 7.26 40.85 4.85
2054 3463 2.030451 CAGAAAAAGACTTGAGCTGCCC 60.030 50.000 0.00 0.00 0.00 5.36
2055 3464 1.956477 GAAAAAGACTTGAGCTGCCCA 59.044 47.619 0.00 0.00 0.00 5.36
2056 3465 1.322442 AAAAGACTTGAGCTGCCCAC 58.678 50.000 0.00 0.00 0.00 4.61
2057 3466 0.475906 AAAGACTTGAGCTGCCCACT 59.524 50.000 0.00 0.00 0.00 4.00
2058 3467 0.036022 AAGACTTGAGCTGCCCACTC 59.964 55.000 0.00 0.00 34.62 3.51
2059 3468 0.835543 AGACTTGAGCTGCCCACTCT 60.836 55.000 0.00 0.00 35.12 3.24
2060 3469 0.390998 GACTTGAGCTGCCCACTCTC 60.391 60.000 0.00 0.00 35.12 3.20
2061 3470 1.078567 CTTGAGCTGCCCACTCTCC 60.079 63.158 0.00 0.00 35.12 3.71
2062 3471 1.834856 CTTGAGCTGCCCACTCTCCA 61.835 60.000 0.00 0.00 35.12 3.86
2063 3472 2.116983 TTGAGCTGCCCACTCTCCAC 62.117 60.000 0.00 0.00 35.12 4.02
2064 3473 2.527624 AGCTGCCCACTCTCCACA 60.528 61.111 0.00 0.00 0.00 4.17
2065 3474 1.908340 GAGCTGCCCACTCTCCACAT 61.908 60.000 0.00 0.00 0.00 3.21
2066 3475 1.451028 GCTGCCCACTCTCCACATC 60.451 63.158 0.00 0.00 0.00 3.06
2067 3476 1.153489 CTGCCCACTCTCCACATCG 60.153 63.158 0.00 0.00 0.00 3.84
2068 3477 2.512515 GCCCACTCTCCACATCGC 60.513 66.667 0.00 0.00 0.00 4.58
2078 3487 2.154462 CTCCACATCGCTTCCAACTTT 58.846 47.619 0.00 0.00 0.00 2.66
2080 3489 3.745799 TCCACATCGCTTCCAACTTTAA 58.254 40.909 0.00 0.00 0.00 1.52
2083 3492 5.067936 TCCACATCGCTTCCAACTTTAAAAA 59.932 36.000 0.00 0.00 0.00 1.94
2084 3493 5.402270 CCACATCGCTTCCAACTTTAAAAAG 59.598 40.000 0.90 0.90 41.73 2.27
2088 3497 7.222031 ACATCGCTTCCAACTTTAAAAAGAAAC 59.778 33.333 9.37 0.00 39.31 2.78
2096 3505 8.977412 TCCAACTTTAAAAAGAAACTTCAGGAT 58.023 29.630 9.37 0.00 39.31 3.24
2128 3537 0.517316 GCCGAATCGCTTGTCAAACT 59.483 50.000 0.00 0.00 0.00 2.66
2142 3551 7.165427 CTTGTCAAACTCAAGCATTTTTACC 57.835 36.000 0.00 0.00 36.38 2.85
2148 3557 3.751698 ACTCAAGCATTTTTACCGAGTCC 59.248 43.478 0.00 0.00 0.00 3.85
2169 3579 2.288457 CGTTGAGTCTGATGGTGTGTCT 60.288 50.000 0.00 0.00 0.00 3.41
2173 3583 2.560542 GAGTCTGATGGTGTGTCTGTCT 59.439 50.000 0.00 0.00 0.00 3.41
2174 3584 2.560542 AGTCTGATGGTGTGTCTGTCTC 59.439 50.000 0.00 0.00 0.00 3.36
2175 3585 2.560542 GTCTGATGGTGTGTCTGTCTCT 59.439 50.000 0.00 0.00 0.00 3.10
2176 3586 2.822561 TCTGATGGTGTGTCTGTCTCTC 59.177 50.000 0.00 0.00 0.00 3.20
2178 3588 2.965147 TGATGGTGTGTCTGTCTCTCAA 59.035 45.455 0.00 0.00 0.00 3.02
2179 3589 3.387699 TGATGGTGTGTCTGTCTCTCAAA 59.612 43.478 0.00 0.00 0.00 2.69
2180 3590 3.904800 TGGTGTGTCTGTCTCTCAAAA 57.095 42.857 0.00 0.00 0.00 2.44
2182 3592 3.938963 TGGTGTGTCTGTCTCTCAAAAAC 59.061 43.478 0.00 0.00 0.00 2.43
2184 3594 3.001330 GTGTGTCTGTCTCTCAAAAACGG 59.999 47.826 0.00 0.00 0.00 4.44
2185 3595 3.118920 TGTGTCTGTCTCTCAAAAACGGA 60.119 43.478 0.00 0.00 0.00 4.69
2186 3596 3.491267 GTGTCTGTCTCTCAAAAACGGAG 59.509 47.826 0.00 0.00 0.00 4.63
2187 3597 3.060602 GTCTGTCTCTCAAAAACGGAGG 58.939 50.000 0.00 0.00 33.18 4.30
2190 3600 2.169769 TGTCTCTCAAAAACGGAGGTGT 59.830 45.455 0.00 0.00 33.18 4.16
2191 3601 3.203716 GTCTCTCAAAAACGGAGGTGTT 58.796 45.455 0.00 0.00 33.18 3.32
2192 3602 3.002348 GTCTCTCAAAAACGGAGGTGTTG 59.998 47.826 0.00 0.00 33.18 3.33
2193 3603 1.673920 TCTCAAAAACGGAGGTGTTGC 59.326 47.619 0.00 0.00 33.18 4.17
2194 3604 1.676006 CTCAAAAACGGAGGTGTTGCT 59.324 47.619 0.00 0.00 31.10 3.91
2195 3605 2.096248 TCAAAAACGGAGGTGTTGCTT 58.904 42.857 0.00 0.00 31.10 3.91
2196 3606 2.098443 TCAAAAACGGAGGTGTTGCTTC 59.902 45.455 0.00 0.00 31.10 3.86
2197 3607 0.661020 AAAACGGAGGTGTTGCTTCG 59.339 50.000 0.00 0.00 31.10 3.79
2198 3608 1.782028 AAACGGAGGTGTTGCTTCGC 61.782 55.000 0.00 0.00 31.10 4.70
2199 3609 3.423154 CGGAGGTGTTGCTTCGCC 61.423 66.667 3.71 3.71 38.17 5.54
2201 3611 1.600916 GGAGGTGTTGCTTCGCCTT 60.601 57.895 13.26 0.94 46.64 4.35
2202 3612 1.172812 GGAGGTGTTGCTTCGCCTTT 61.173 55.000 13.26 0.00 46.64 3.11
2203 3613 0.668535 GAGGTGTTGCTTCGCCTTTT 59.331 50.000 13.26 0.00 46.64 2.27
2204 3614 1.877443 GAGGTGTTGCTTCGCCTTTTA 59.123 47.619 13.26 0.00 46.64 1.52
2205 3615 1.607148 AGGTGTTGCTTCGCCTTTTAC 59.393 47.619 7.74 0.00 44.70 2.01
2206 3616 1.335597 GGTGTTGCTTCGCCTTTTACC 60.336 52.381 4.51 0.00 35.37 2.85
2207 3617 0.955905 TGTTGCTTCGCCTTTTACCC 59.044 50.000 0.00 0.00 0.00 3.69
2208 3618 0.955905 GTTGCTTCGCCTTTTACCCA 59.044 50.000 0.00 0.00 0.00 4.51
2209 3619 1.068541 GTTGCTTCGCCTTTTACCCAG 60.069 52.381 0.00 0.00 0.00 4.45
2210 3620 0.109723 TGCTTCGCCTTTTACCCAGT 59.890 50.000 0.00 0.00 0.00 4.00
2211 3621 1.348366 TGCTTCGCCTTTTACCCAGTA 59.652 47.619 0.00 0.00 0.00 2.74
2212 3622 2.007608 GCTTCGCCTTTTACCCAGTAG 58.992 52.381 0.00 0.00 0.00 2.57
2213 3623 2.354403 GCTTCGCCTTTTACCCAGTAGA 60.354 50.000 0.00 0.00 0.00 2.59
2214 3624 3.867216 GCTTCGCCTTTTACCCAGTAGAA 60.867 47.826 0.00 0.00 0.00 2.10
2216 3626 3.667360 TCGCCTTTTACCCAGTAGAAAC 58.333 45.455 0.00 0.00 0.00 2.78
2226 3636 3.072476 ACCCAGTAGAAACTAGCAAGCAA 59.928 43.478 0.00 0.00 33.48 3.91
2228 3638 4.702131 CCCAGTAGAAACTAGCAAGCAATT 59.298 41.667 0.00 0.00 33.48 2.32
2234 3644 8.311836 AGTAGAAACTAGCAAGCAATTACTACA 58.688 33.333 0.00 0.00 32.84 2.74
2236 3646 6.595716 AGAAACTAGCAAGCAATTACTACAGG 59.404 38.462 0.00 0.00 0.00 4.00
2239 3649 4.286297 AGCAAGCAATTACTACAGGACA 57.714 40.909 0.00 0.00 0.00 4.02
2275 3686 5.565592 TTTTCAGTATACAGGCAGCAATG 57.434 39.130 5.50 0.00 0.00 2.82
2285 3696 1.216977 GCAGCAATGCCAGCATCAA 59.783 52.632 14.11 0.00 35.31 2.57
2302 3713 6.025749 GCATCAAGCTTAAATATTACCCCC 57.974 41.667 0.00 0.00 41.15 5.40
2303 3714 5.775195 GCATCAAGCTTAAATATTACCCCCT 59.225 40.000 0.00 0.00 41.15 4.79
2304 3715 6.071896 GCATCAAGCTTAAATATTACCCCCTC 60.072 42.308 0.00 0.00 41.15 4.30
2305 3716 5.948842 TCAAGCTTAAATATTACCCCCTCC 58.051 41.667 0.00 0.00 0.00 4.30
2306 3717 5.077564 CAAGCTTAAATATTACCCCCTCCC 58.922 45.833 0.00 0.00 0.00 4.30
2307 3718 4.588520 AGCTTAAATATTACCCCCTCCCT 58.411 43.478 0.00 0.00 0.00 4.20
2308 3719 4.602294 AGCTTAAATATTACCCCCTCCCTC 59.398 45.833 0.00 0.00 0.00 4.30
2309 3720 4.263816 GCTTAAATATTACCCCCTCCCTCC 60.264 50.000 0.00 0.00 0.00 4.30
2310 3721 3.764765 AAATATTACCCCCTCCCTCCT 57.235 47.619 0.00 0.00 0.00 3.69
2311 3722 4.883207 AAATATTACCCCCTCCCTCCTA 57.117 45.455 0.00 0.00 0.00 2.94
2312 3723 5.401063 AAATATTACCCCCTCCCTCCTAT 57.599 43.478 0.00 0.00 0.00 2.57
2313 3724 6.525010 AAATATTACCCCCTCCCTCCTATA 57.475 41.667 0.00 0.00 0.00 1.31
2314 3725 6.525010 AATATTACCCCCTCCCTCCTATAA 57.475 41.667 0.00 0.00 0.00 0.98
2315 3726 6.725318 ATATTACCCCCTCCCTCCTATAAT 57.275 41.667 0.00 0.00 0.00 1.28
2316 3727 2.743131 ACCCCCTCCCTCCTATAATG 57.257 55.000 0.00 0.00 0.00 1.90
2317 3728 1.880610 ACCCCCTCCCTCCTATAATGT 59.119 52.381 0.00 0.00 0.00 2.71
2318 3729 3.084561 ACCCCCTCCCTCCTATAATGTA 58.915 50.000 0.00 0.00 0.00 2.29
2319 3730 3.477517 ACCCCCTCCCTCCTATAATGTAA 59.522 47.826 0.00 0.00 0.00 2.41
2320 3731 4.077026 ACCCCCTCCCTCCTATAATGTAAA 60.077 45.833 0.00 0.00 0.00 2.01
2321 3732 4.917656 CCCCCTCCCTCCTATAATGTAAAA 59.082 45.833 0.00 0.00 0.00 1.52
2322 3733 5.555941 CCCCCTCCCTCCTATAATGTAAAAT 59.444 44.000 0.00 0.00 0.00 1.82
2323 3734 6.485171 CCCCTCCCTCCTATAATGTAAAATG 58.515 44.000 0.00 0.00 0.00 2.32
2324 3735 6.045577 CCCCTCCCTCCTATAATGTAAAATGT 59.954 42.308 0.00 0.00 0.00 2.71
2325 3736 7.422562 CCCCTCCCTCCTATAATGTAAAATGTT 60.423 40.741 0.00 0.00 0.00 2.71
2326 3737 8.665906 CCCTCCCTCCTATAATGTAAAATGTTA 58.334 37.037 0.00 0.00 0.00 2.41
2327 3738 9.503399 CCTCCCTCCTATAATGTAAAATGTTAC 57.497 37.037 0.00 0.00 40.15 2.50
2330 3741 9.503399 CCCTCCTATAATGTAAAATGTTACTCC 57.497 37.037 7.31 0.00 40.35 3.85
2331 3742 9.503399 CCTCCTATAATGTAAAATGTTACTCCC 57.497 37.037 7.31 0.00 40.35 4.30
2334 3745 9.503399 CCTATAATGTAAAATGTTACTCCCTCC 57.497 37.037 7.31 0.00 40.35 4.30
2337 3748 9.936329 ATAATGTAAAATGTTACTCCCTCCATT 57.064 29.630 7.31 0.22 40.35 3.16
2338 3749 7.881775 ATGTAAAATGTTACTCCCTCCATTC 57.118 36.000 7.31 0.00 40.35 2.67
2339 3750 6.184789 TGTAAAATGTTACTCCCTCCATTCC 58.815 40.000 7.31 0.00 40.35 3.01
2340 3751 3.953542 AATGTTACTCCCTCCATTCCC 57.046 47.619 0.00 0.00 0.00 3.97
2341 3752 2.661176 TGTTACTCCCTCCATTCCCT 57.339 50.000 0.00 0.00 0.00 4.20
2342 3753 2.929301 TGTTACTCCCTCCATTCCCTT 58.071 47.619 0.00 0.00 0.00 3.95
2343 3754 4.083080 TGTTACTCCCTCCATTCCCTTA 57.917 45.455 0.00 0.00 0.00 2.69
2344 3755 4.641868 TGTTACTCCCTCCATTCCCTTAT 58.358 43.478 0.00 0.00 0.00 1.73
2345 3756 5.795079 TGTTACTCCCTCCATTCCCTTATA 58.205 41.667 0.00 0.00 0.00 0.98
2346 3757 5.605488 TGTTACTCCCTCCATTCCCTTATAC 59.395 44.000 0.00 0.00 0.00 1.47
2347 3758 4.295905 ACTCCCTCCATTCCCTTATACA 57.704 45.455 0.00 0.00 0.00 2.29
2348 3759 4.641868 ACTCCCTCCATTCCCTTATACAA 58.358 43.478 0.00 0.00 0.00 2.41
2349 3760 4.660771 ACTCCCTCCATTCCCTTATACAAG 59.339 45.833 0.00 0.00 0.00 3.16
2360 3771 4.965119 CCTTATACAAGGCCACAAACTC 57.035 45.455 5.01 0.00 44.90 3.01
2361 3772 4.331968 CCTTATACAAGGCCACAAACTCA 58.668 43.478 5.01 0.00 44.90 3.41
2362 3773 4.949856 CCTTATACAAGGCCACAAACTCAT 59.050 41.667 5.01 0.00 44.90 2.90
2363 3774 6.119536 CCTTATACAAGGCCACAAACTCATA 58.880 40.000 5.01 0.00 44.90 2.15
2364 3775 6.772716 CCTTATACAAGGCCACAAACTCATAT 59.227 38.462 5.01 0.00 44.90 1.78
2365 3776 7.285401 CCTTATACAAGGCCACAAACTCATATT 59.715 37.037 5.01 0.00 44.90 1.28
2366 3777 9.337396 CTTATACAAGGCCACAAACTCATATTA 57.663 33.333 5.01 0.00 0.00 0.98
2367 3778 5.897377 ACAAGGCCACAAACTCATATTAC 57.103 39.130 5.01 0.00 0.00 1.89
2368 3779 5.321102 ACAAGGCCACAAACTCATATTACA 58.679 37.500 5.01 0.00 0.00 2.41
2369 3780 5.415701 ACAAGGCCACAAACTCATATTACAG 59.584 40.000 5.01 0.00 0.00 2.74
2370 3781 4.526970 AGGCCACAAACTCATATTACAGG 58.473 43.478 5.01 0.00 0.00 4.00
2371 3782 4.018415 AGGCCACAAACTCATATTACAGGT 60.018 41.667 5.01 0.00 0.00 4.00
2372 3783 5.190925 AGGCCACAAACTCATATTACAGGTA 59.809 40.000 5.01 0.00 0.00 3.08
2373 3784 5.296035 GGCCACAAACTCATATTACAGGTAC 59.704 44.000 0.00 0.00 0.00 3.34
2374 3785 5.296035 GCCACAAACTCATATTACAGGTACC 59.704 44.000 2.73 2.73 0.00 3.34
2375 3786 6.411376 CCACAAACTCATATTACAGGTACCA 58.589 40.000 15.94 0.00 0.00 3.25
2376 3787 6.882140 CCACAAACTCATATTACAGGTACCAA 59.118 38.462 15.94 0.00 0.00 3.67
2377 3788 7.065803 CCACAAACTCATATTACAGGTACCAAG 59.934 40.741 15.94 8.83 0.00 3.61
2378 3789 7.822334 CACAAACTCATATTACAGGTACCAAGA 59.178 37.037 15.94 0.00 0.00 3.02
2379 3790 8.380099 ACAAACTCATATTACAGGTACCAAGAA 58.620 33.333 15.94 4.72 0.00 2.52
2380 3791 9.226606 CAAACTCATATTACAGGTACCAAGAAA 57.773 33.333 15.94 3.04 0.00 2.52
2381 3792 9.802039 AAACTCATATTACAGGTACCAAGAAAA 57.198 29.630 15.94 6.97 0.00 2.29
2382 3793 9.802039 AACTCATATTACAGGTACCAAGAAAAA 57.198 29.630 15.94 4.69 0.00 1.94
2404 3815 8.988546 AAAAATTTAATAACCCCTTTGCAAGT 57.011 26.923 0.00 0.00 0.00 3.16
2405 3816 8.615878 AAAATTTAATAACCCCTTTGCAAGTC 57.384 30.769 0.00 0.00 0.00 3.01
2406 3817 6.926630 ATTTAATAACCCCTTTGCAAGTCA 57.073 33.333 0.00 0.00 0.00 3.41
2407 3818 6.732896 TTTAATAACCCCTTTGCAAGTCAA 57.267 33.333 0.00 0.00 0.00 3.18
2408 3819 4.600692 AATAACCCCTTTGCAAGTCAAC 57.399 40.909 0.00 0.00 33.73 3.18
2409 3820 2.159179 AACCCCTTTGCAAGTCAACT 57.841 45.000 0.00 0.00 33.73 3.16
2410 3821 2.159179 ACCCCTTTGCAAGTCAACTT 57.841 45.000 0.00 0.00 33.73 2.66
2411 3822 2.466846 ACCCCTTTGCAAGTCAACTTT 58.533 42.857 0.00 0.00 33.73 2.66
2412 3823 2.837591 ACCCCTTTGCAAGTCAACTTTT 59.162 40.909 0.00 0.00 33.73 2.27
2413 3824 3.118775 ACCCCTTTGCAAGTCAACTTTTC 60.119 43.478 0.00 0.00 33.73 2.29
2414 3825 3.132824 CCCCTTTGCAAGTCAACTTTTCT 59.867 43.478 0.00 0.00 33.73 2.52
2415 3826 4.383010 CCCCTTTGCAAGTCAACTTTTCTT 60.383 41.667 0.00 0.00 33.73 2.52
2416 3827 5.178061 CCCTTTGCAAGTCAACTTTTCTTT 58.822 37.500 0.00 0.00 33.73 2.52
2417 3828 5.643348 CCCTTTGCAAGTCAACTTTTCTTTT 59.357 36.000 0.00 0.00 33.73 2.27
2418 3829 6.816140 CCCTTTGCAAGTCAACTTTTCTTTTA 59.184 34.615 0.00 0.00 33.73 1.52
2419 3830 7.010460 CCCTTTGCAAGTCAACTTTTCTTTTAG 59.990 37.037 0.00 0.00 33.73 1.85
2420 3831 7.545615 CCTTTGCAAGTCAACTTTTCTTTTAGT 59.454 33.333 0.00 0.00 33.73 2.24
2421 3832 8.825667 TTTGCAAGTCAACTTTTCTTTTAGTT 57.174 26.923 0.00 0.00 35.06 2.24
2422 3833 9.915629 TTTGCAAGTCAACTTTTCTTTTAGTTA 57.084 25.926 0.00 0.00 33.49 2.24
2423 3834 9.915629 TTGCAAGTCAACTTTTCTTTTAGTTAA 57.084 25.926 0.00 0.00 33.49 2.01
2424 3835 9.349145 TGCAAGTCAACTTTTCTTTTAGTTAAC 57.651 29.630 0.00 0.00 33.49 2.01
2425 3836 8.804743 GCAAGTCAACTTTTCTTTTAGTTAACC 58.195 33.333 0.88 0.00 33.49 2.85
2426 3837 9.006215 CAAGTCAACTTTTCTTTTAGTTAACCG 57.994 33.333 0.88 0.00 33.49 4.44
2427 3838 8.496707 AGTCAACTTTTCTTTTAGTTAACCGA 57.503 30.769 0.88 0.00 33.49 4.69
2428 3839 8.610035 AGTCAACTTTTCTTTTAGTTAACCGAG 58.390 33.333 0.88 0.00 33.49 4.63
2429 3840 8.606602 GTCAACTTTTCTTTTAGTTAACCGAGA 58.393 33.333 0.88 0.00 33.49 4.04
2430 3841 9.333724 TCAACTTTTCTTTTAGTTAACCGAGAT 57.666 29.630 0.88 0.00 33.49 2.75
2431 3842 9.595357 CAACTTTTCTTTTAGTTAACCGAGATC 57.405 33.333 0.88 0.00 33.49 2.75
2432 3843 8.897872 ACTTTTCTTTTAGTTAACCGAGATCA 57.102 30.769 0.88 0.00 0.00 2.92
2433 3844 9.503399 ACTTTTCTTTTAGTTAACCGAGATCAT 57.497 29.630 0.88 0.00 0.00 2.45
2442 3853 9.754382 TTAGTTAACCGAGATCATTAATACACC 57.246 33.333 0.88 0.00 0.00 4.16
2443 3854 7.788026 AGTTAACCGAGATCATTAATACACCA 58.212 34.615 0.88 0.00 0.00 4.17
2444 3855 7.709613 AGTTAACCGAGATCATTAATACACCAC 59.290 37.037 0.88 0.00 0.00 4.16
2445 3856 5.607939 ACCGAGATCATTAATACACCACA 57.392 39.130 0.00 0.00 0.00 4.17
2446 3857 5.984725 ACCGAGATCATTAATACACCACAA 58.015 37.500 0.00 0.00 0.00 3.33
2447 3858 6.049149 ACCGAGATCATTAATACACCACAAG 58.951 40.000 0.00 0.00 0.00 3.16
2448 3859 5.050091 CCGAGATCATTAATACACCACAAGC 60.050 44.000 0.00 0.00 0.00 4.01
2449 3860 5.523552 CGAGATCATTAATACACCACAAGCA 59.476 40.000 0.00 0.00 0.00 3.91
2450 3861 6.203530 CGAGATCATTAATACACCACAAGCAT 59.796 38.462 0.00 0.00 0.00 3.79
2451 3862 7.268199 AGATCATTAATACACCACAAGCATG 57.732 36.000 0.00 0.00 0.00 4.06
2452 3863 5.247507 TCATTAATACACCACAAGCATGC 57.752 39.130 10.51 10.51 0.00 4.06
2453 3864 4.704057 TCATTAATACACCACAAGCATGCA 59.296 37.500 21.98 0.00 0.00 3.96
2454 3865 5.184671 TCATTAATACACCACAAGCATGCAA 59.815 36.000 21.98 0.09 0.00 4.08
2455 3866 3.302365 AATACACCACAAGCATGCAAC 57.698 42.857 21.98 0.00 0.00 4.17
2456 3867 0.590682 TACACCACAAGCATGCAACG 59.409 50.000 21.98 9.99 0.00 4.10
2457 3868 1.100463 ACACCACAAGCATGCAACGA 61.100 50.000 21.98 0.00 0.00 3.85
2458 3869 0.030504 CACCACAAGCATGCAACGAA 59.969 50.000 21.98 0.00 0.00 3.85
2459 3870 0.961019 ACCACAAGCATGCAACGAAT 59.039 45.000 21.98 0.00 0.00 3.34
2460 3871 1.336148 ACCACAAGCATGCAACGAATG 60.336 47.619 21.98 10.75 0.00 2.67
2461 3872 1.068402 CCACAAGCATGCAACGAATGA 60.068 47.619 21.98 0.00 0.00 2.57
2462 3873 2.607526 CCACAAGCATGCAACGAATGAA 60.608 45.455 21.98 0.00 0.00 2.57
2463 3874 3.247442 CACAAGCATGCAACGAATGAAT 58.753 40.909 21.98 0.00 0.00 2.57
2464 3875 3.060230 CACAAGCATGCAACGAATGAATG 59.940 43.478 21.98 8.89 46.55 2.67
2465 3876 2.572191 AGCATGCAACGAATGAATGG 57.428 45.000 21.98 0.13 44.30 3.16
2466 3877 1.135527 AGCATGCAACGAATGAATGGG 59.864 47.619 21.98 0.00 44.30 4.00
2467 3878 1.803625 GCATGCAACGAATGAATGGGG 60.804 52.381 14.21 0.00 44.30 4.96
2468 3879 1.750206 CATGCAACGAATGAATGGGGA 59.250 47.619 0.00 0.00 40.91 4.81
2469 3880 1.462616 TGCAACGAATGAATGGGGAG 58.537 50.000 0.00 0.00 0.00 4.30
2470 3881 0.740737 GCAACGAATGAATGGGGAGG 59.259 55.000 0.00 0.00 0.00 4.30
2471 3882 1.681780 GCAACGAATGAATGGGGAGGA 60.682 52.381 0.00 0.00 0.00 3.71
2472 3883 2.722094 CAACGAATGAATGGGGAGGAA 58.278 47.619 0.00 0.00 0.00 3.36
2473 3884 2.684881 CAACGAATGAATGGGGAGGAAG 59.315 50.000 0.00 0.00 0.00 3.46
2474 3885 1.916181 ACGAATGAATGGGGAGGAAGT 59.084 47.619 0.00 0.00 0.00 3.01
2475 3886 2.292267 CGAATGAATGGGGAGGAAGTG 58.708 52.381 0.00 0.00 0.00 3.16
2476 3887 2.092968 CGAATGAATGGGGAGGAAGTGA 60.093 50.000 0.00 0.00 0.00 3.41
2477 3888 3.434167 CGAATGAATGGGGAGGAAGTGAT 60.434 47.826 0.00 0.00 0.00 3.06
2478 3889 3.589951 ATGAATGGGGAGGAAGTGATG 57.410 47.619 0.00 0.00 0.00 3.07
2479 3890 1.565759 TGAATGGGGAGGAAGTGATGG 59.434 52.381 0.00 0.00 0.00 3.51
2480 3891 1.846439 GAATGGGGAGGAAGTGATGGA 59.154 52.381 0.00 0.00 0.00 3.41
2481 3892 1.516110 ATGGGGAGGAAGTGATGGAG 58.484 55.000 0.00 0.00 0.00 3.86
2482 3893 0.119155 TGGGGAGGAAGTGATGGAGT 59.881 55.000 0.00 0.00 0.00 3.85
2483 3894 0.543749 GGGGAGGAAGTGATGGAGTG 59.456 60.000 0.00 0.00 0.00 3.51
2484 3895 1.280457 GGGAGGAAGTGATGGAGTGT 58.720 55.000 0.00 0.00 0.00 3.55
2485 3896 1.208293 GGGAGGAAGTGATGGAGTGTC 59.792 57.143 0.00 0.00 0.00 3.67
2486 3897 1.902508 GGAGGAAGTGATGGAGTGTCA 59.097 52.381 0.00 0.00 0.00 3.58
2487 3898 2.503356 GGAGGAAGTGATGGAGTGTCAT 59.497 50.000 0.00 0.00 0.00 3.06
2488 3899 3.054802 GGAGGAAGTGATGGAGTGTCATT 60.055 47.826 0.00 0.00 0.00 2.57
2489 3900 4.162320 GGAGGAAGTGATGGAGTGTCATTA 59.838 45.833 0.00 0.00 0.00 1.90
2490 3901 5.163258 GGAGGAAGTGATGGAGTGTCATTAT 60.163 44.000 0.00 0.00 0.00 1.28
2491 3902 5.678583 AGGAAGTGATGGAGTGTCATTATG 58.321 41.667 0.00 0.00 0.00 1.90
2492 3903 5.426509 AGGAAGTGATGGAGTGTCATTATGA 59.573 40.000 0.00 0.00 0.00 2.15
2508 3919 8.370493 GTCATTATGACTACATGCATGTAAGT 57.630 34.615 33.05 29.88 43.73 2.24
2509 3920 9.476202 GTCATTATGACTACATGCATGTAAGTA 57.524 33.333 33.05 23.37 43.73 2.24
2521 3932 9.139174 ACATGCATGTAAGTATTAAAAAGTTGC 57.861 29.630 30.50 0.00 39.68 4.17
2522 3933 9.357652 CATGCATGTAAGTATTAAAAAGTTGCT 57.642 29.630 18.91 0.00 28.70 3.91
2538 3949 9.516314 AAAAAGTTGCTAGTACAAGAAAACATC 57.484 29.630 0.00 0.00 0.00 3.06
2539 3950 7.801716 AAGTTGCTAGTACAAGAAAACATCA 57.198 32.000 0.00 0.00 0.00 3.07
2540 3951 7.986085 AGTTGCTAGTACAAGAAAACATCAT 57.014 32.000 0.00 0.00 0.00 2.45
2541 3952 8.396272 AGTTGCTAGTACAAGAAAACATCATT 57.604 30.769 0.00 0.00 0.00 2.57
2542 3953 9.502091 AGTTGCTAGTACAAGAAAACATCATTA 57.498 29.630 0.00 0.00 0.00 1.90
2552 3963 9.341078 ACAAGAAAACATCATTAAATTTTGCCT 57.659 25.926 0.00 0.00 0.00 4.75
2553 3964 9.815936 CAAGAAAACATCATTAAATTTTGCCTC 57.184 29.630 0.00 0.00 0.00 4.70
2554 3965 8.243289 AGAAAACATCATTAAATTTTGCCTCG 57.757 30.769 0.00 0.00 0.00 4.63
2555 3966 8.087750 AGAAAACATCATTAAATTTTGCCTCGA 58.912 29.630 0.00 0.00 0.00 4.04
2556 3967 8.776376 AAAACATCATTAAATTTTGCCTCGAT 57.224 26.923 0.00 0.00 0.00 3.59
2557 3968 8.776376 AAACATCATTAAATTTTGCCTCGATT 57.224 26.923 0.00 0.00 0.00 3.34
2558 3969 9.868277 AAACATCATTAAATTTTGCCTCGATTA 57.132 25.926 0.00 0.00 0.00 1.75
2559 3970 8.856490 ACATCATTAAATTTTGCCTCGATTAC 57.144 30.769 0.00 0.00 0.00 1.89
2560 3971 8.686334 ACATCATTAAATTTTGCCTCGATTACT 58.314 29.630 0.00 0.00 0.00 2.24
2561 3972 8.961092 CATCATTAAATTTTGCCTCGATTACTG 58.039 33.333 0.00 0.00 0.00 2.74
2562 3973 8.050778 TCATTAAATTTTGCCTCGATTACTGT 57.949 30.769 0.00 0.00 0.00 3.55
2563 3974 8.519526 TCATTAAATTTTGCCTCGATTACTGTT 58.480 29.630 0.00 0.00 0.00 3.16
2564 3975 8.586273 CATTAAATTTTGCCTCGATTACTGTTG 58.414 33.333 0.00 0.00 0.00 3.33
2565 3976 4.701956 ATTTTGCCTCGATTACTGTTGG 57.298 40.909 0.00 0.00 0.00 3.77
2566 3977 2.851263 TTGCCTCGATTACTGTTGGT 57.149 45.000 0.00 0.00 0.00 3.67
2567 3978 2.093306 TGCCTCGATTACTGTTGGTG 57.907 50.000 0.00 0.00 0.00 4.17
2568 3979 1.621317 TGCCTCGATTACTGTTGGTGA 59.379 47.619 0.00 0.00 0.00 4.02
2569 3980 2.000447 GCCTCGATTACTGTTGGTGAC 59.000 52.381 0.00 0.00 0.00 3.67
2570 3981 2.618053 CCTCGATTACTGTTGGTGACC 58.382 52.381 0.00 0.00 0.00 4.02
2571 3982 2.233922 CCTCGATTACTGTTGGTGACCT 59.766 50.000 2.11 0.00 0.00 3.85
2572 3983 3.306780 CCTCGATTACTGTTGGTGACCTT 60.307 47.826 2.11 0.00 0.00 3.50
2573 3984 3.659786 TCGATTACTGTTGGTGACCTTG 58.340 45.455 2.11 0.00 0.00 3.61
2574 3985 3.070446 TCGATTACTGTTGGTGACCTTGT 59.930 43.478 2.11 0.00 0.00 3.16
2575 3986 4.281435 TCGATTACTGTTGGTGACCTTGTA 59.719 41.667 2.11 0.00 0.00 2.41
2576 3987 5.046878 TCGATTACTGTTGGTGACCTTGTAT 60.047 40.000 2.11 0.00 0.00 2.29
2577 3988 5.642063 CGATTACTGTTGGTGACCTTGTATT 59.358 40.000 2.11 0.00 0.00 1.89
2578 3989 6.402118 CGATTACTGTTGGTGACCTTGTATTG 60.402 42.308 2.11 0.00 0.00 1.90
2579 3990 4.431416 ACTGTTGGTGACCTTGTATTGA 57.569 40.909 2.11 0.00 0.00 2.57
2580 3991 4.985538 ACTGTTGGTGACCTTGTATTGAT 58.014 39.130 2.11 0.00 0.00 2.57
2581 3992 4.761739 ACTGTTGGTGACCTTGTATTGATG 59.238 41.667 2.11 0.00 0.00 3.07
2582 3993 3.505680 TGTTGGTGACCTTGTATTGATGC 59.494 43.478 2.11 0.00 0.00 3.91
2583 3994 3.431673 TGGTGACCTTGTATTGATGCA 57.568 42.857 2.11 0.00 0.00 3.96
2584 3995 3.760738 TGGTGACCTTGTATTGATGCAA 58.239 40.909 2.11 0.00 0.00 4.08
2585 3996 4.148079 TGGTGACCTTGTATTGATGCAAA 58.852 39.130 2.11 0.00 32.12 3.68
2586 3997 4.586421 TGGTGACCTTGTATTGATGCAAAA 59.414 37.500 2.11 0.00 32.12 2.44
2587 3998 5.245751 TGGTGACCTTGTATTGATGCAAAAT 59.754 36.000 2.11 0.00 32.12 1.82
2588 3999 5.577945 GGTGACCTTGTATTGATGCAAAATG 59.422 40.000 7.96 0.00 32.12 2.32
2589 4000 6.158598 GTGACCTTGTATTGATGCAAAATGT 58.841 36.000 7.96 0.00 32.12 2.71
2590 4001 7.312154 GTGACCTTGTATTGATGCAAAATGTA 58.688 34.615 7.96 0.00 32.12 2.29
2591 4002 7.975616 GTGACCTTGTATTGATGCAAAATGTAT 59.024 33.333 7.96 0.00 32.12 2.29
2592 4003 8.530311 TGACCTTGTATTGATGCAAAATGTATT 58.470 29.630 7.96 0.00 32.12 1.89
2594 4005 9.801873 ACCTTGTATTGATGCAAAATGTATTAC 57.198 29.630 7.96 0.16 32.12 1.89
2595 4006 9.800433 CCTTGTATTGATGCAAAATGTATTACA 57.200 29.630 7.96 0.00 32.12 2.41
2602 4013 8.909708 TGATGCAAAATGTATTACAACTAAGC 57.090 30.769 0.00 3.24 0.00 3.09
2603 4014 7.973388 TGATGCAAAATGTATTACAACTAAGCC 59.027 33.333 0.00 0.00 0.00 4.35
2604 4015 6.318628 TGCAAAATGTATTACAACTAAGCCG 58.681 36.000 0.00 0.00 0.00 5.52
2605 4016 5.229260 GCAAAATGTATTACAACTAAGCCGC 59.771 40.000 0.00 0.00 0.00 6.53
2606 4017 5.494632 AAATGTATTACAACTAAGCCGCC 57.505 39.130 0.00 0.00 0.00 6.13
2607 4018 2.542597 TGTATTACAACTAAGCCGCCG 58.457 47.619 0.00 0.00 0.00 6.46
2608 4019 2.094078 TGTATTACAACTAAGCCGCCGT 60.094 45.455 0.00 0.00 0.00 5.68
2609 4020 2.965572 ATTACAACTAAGCCGCCGTA 57.034 45.000 0.00 0.00 0.00 4.02
2610 4021 2.965572 TTACAACTAAGCCGCCGTAT 57.034 45.000 0.00 0.00 0.00 3.06
2611 4022 2.497107 TACAACTAAGCCGCCGTATC 57.503 50.000 0.00 0.00 0.00 2.24
2612 4023 0.822164 ACAACTAAGCCGCCGTATCT 59.178 50.000 0.00 0.00 0.00 1.98
2613 4024 1.206371 ACAACTAAGCCGCCGTATCTT 59.794 47.619 0.00 0.00 0.00 2.40
2614 4025 1.593006 CAACTAAGCCGCCGTATCTTG 59.407 52.381 0.00 0.00 0.00 3.02
2615 4026 0.822164 ACTAAGCCGCCGTATCTTGT 59.178 50.000 0.00 0.00 0.00 3.16
2616 4027 1.209128 CTAAGCCGCCGTATCTTGTG 58.791 55.000 0.00 0.00 0.00 3.33
2617 4028 0.808453 TAAGCCGCCGTATCTTGTGC 60.808 55.000 0.00 0.00 0.00 4.57
2618 4029 2.796483 AAGCCGCCGTATCTTGTGCA 62.796 55.000 0.00 0.00 0.00 4.57
2619 4030 2.180204 GCCGCCGTATCTTGTGCAT 61.180 57.895 0.00 0.00 0.00 3.96
2620 4031 1.934463 CCGCCGTATCTTGTGCATC 59.066 57.895 0.00 0.00 0.00 3.91
2621 4032 1.498865 CCGCCGTATCTTGTGCATCC 61.499 60.000 0.00 0.00 0.00 3.51
2622 4033 1.821241 CGCCGTATCTTGTGCATCCG 61.821 60.000 0.00 0.00 0.00 4.18
2623 4034 1.934463 CCGTATCTTGTGCATCCGC 59.066 57.895 0.00 0.00 39.24 5.54
2624 4035 1.498865 CCGTATCTTGTGCATCCGCC 61.499 60.000 0.00 0.00 37.32 6.13
2625 4036 1.498865 CGTATCTTGTGCATCCGCCC 61.499 60.000 0.00 0.00 37.32 6.13
2626 4037 0.463654 GTATCTTGTGCATCCGCCCA 60.464 55.000 0.00 0.00 37.32 5.36
2627 4038 0.463654 TATCTTGTGCATCCGCCCAC 60.464 55.000 0.00 0.00 37.32 4.61
2628 4039 3.443045 CTTGTGCATCCGCCCACC 61.443 66.667 0.00 0.00 37.32 4.61
2629 4040 4.277009 TTGTGCATCCGCCCACCA 62.277 61.111 0.00 0.00 37.32 4.17
2630 4041 3.799286 TTGTGCATCCGCCCACCAA 62.799 57.895 0.00 0.00 37.32 3.67
2631 4042 3.443045 GTGCATCCGCCCACCAAG 61.443 66.667 0.00 0.00 37.32 3.61
2634 4045 2.676121 CATCCGCCCACCAAGCAA 60.676 61.111 0.00 0.00 0.00 3.91
2635 4046 2.053865 CATCCGCCCACCAAGCAAT 61.054 57.895 0.00 0.00 0.00 3.56
2636 4047 0.751277 CATCCGCCCACCAAGCAATA 60.751 55.000 0.00 0.00 0.00 1.90
2637 4048 0.185901 ATCCGCCCACCAAGCAATAT 59.814 50.000 0.00 0.00 0.00 1.28
2638 4049 0.751277 TCCGCCCACCAAGCAATATG 60.751 55.000 0.00 0.00 0.00 1.78
2639 4050 1.037030 CCGCCCACCAAGCAATATGT 61.037 55.000 0.00 0.00 0.00 2.29
2640 4051 0.101040 CGCCCACCAAGCAATATGTG 59.899 55.000 0.00 0.00 0.00 3.21
2641 4052 1.185315 GCCCACCAAGCAATATGTGT 58.815 50.000 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 74 2.842496 AGAATGAGTCCCTGAATGAGCA 59.158 45.455 0.00 0.00 0.00 4.26
205 206 5.185454 TGCAGTGTCAAACCTATTGGATAG 58.815 41.667 0.00 0.00 37.04 2.08
207 208 4.032960 TGCAGTGTCAAACCTATTGGAT 57.967 40.909 0.00 0.00 37.04 3.41
261 262 2.857186 TGTTTGCAGATGACAGCCTA 57.143 45.000 0.00 0.00 0.00 3.93
294 295 4.066139 GCCCCAACAGCCCCATCT 62.066 66.667 0.00 0.00 0.00 2.90
464 468 8.160765 TGATTTATTCAGTACCCTTTTCTGTCA 58.839 33.333 0.00 0.00 0.00 3.58
465 469 8.561738 TGATTTATTCAGTACCCTTTTCTGTC 57.438 34.615 0.00 0.00 0.00 3.51
484 488 7.201702 TCACCACAGTAATGGGTATGATTTA 57.798 36.000 3.51 0.00 44.81 1.40
488 492 4.102524 GGATCACCACAGTAATGGGTATGA 59.897 45.833 3.51 1.70 44.81 2.15
533 537 6.823689 GGTCTGTTGGATCACATTAACAGTAT 59.176 38.462 17.57 0.00 46.14 2.12
534 538 6.170506 GGTCTGTTGGATCACATTAACAGTA 58.829 40.000 17.57 8.51 46.14 2.74
535 539 5.003804 GGTCTGTTGGATCACATTAACAGT 58.996 41.667 17.57 0.00 46.14 3.55
536 540 4.396166 GGGTCTGTTGGATCACATTAACAG 59.604 45.833 14.53 14.53 46.94 3.16
537 541 4.331968 GGGTCTGTTGGATCACATTAACA 58.668 43.478 0.00 0.00 0.00 2.41
538 542 3.694566 GGGGTCTGTTGGATCACATTAAC 59.305 47.826 0.00 0.00 0.00 2.01
539 543 3.621214 CGGGGTCTGTTGGATCACATTAA 60.621 47.826 0.00 0.00 0.00 1.40
540 544 2.093181 CGGGGTCTGTTGGATCACATTA 60.093 50.000 0.00 0.00 0.00 1.90
541 545 1.340017 CGGGGTCTGTTGGATCACATT 60.340 52.381 0.00 0.00 0.00 2.71
542 546 0.253044 CGGGGTCTGTTGGATCACAT 59.747 55.000 0.00 0.00 0.00 3.21
543 547 1.676968 CGGGGTCTGTTGGATCACA 59.323 57.895 0.00 0.00 0.00 3.58
544 548 1.745489 GCGGGGTCTGTTGGATCAC 60.745 63.158 0.00 0.00 0.00 3.06
545 549 2.668632 GCGGGGTCTGTTGGATCA 59.331 61.111 0.00 0.00 0.00 2.92
546 550 2.511600 CGCGGGGTCTGTTGGATC 60.512 66.667 0.00 0.00 0.00 3.36
547 551 4.096003 CCGCGGGGTCTGTTGGAT 62.096 66.667 20.10 0.00 0.00 3.41
549 553 3.659089 CTACCGCGGGGTCTGTTGG 62.659 68.421 31.76 4.06 46.01 3.77
550 554 1.597797 TACTACCGCGGGGTCTGTTG 61.598 60.000 31.76 15.61 46.01 3.33
551 555 0.899717 TTACTACCGCGGGGTCTGTT 60.900 55.000 31.76 12.90 46.01 3.16
552 556 1.304381 TTACTACCGCGGGGTCTGT 60.304 57.895 31.76 26.82 46.01 3.41
553 557 1.140375 GTTACTACCGCGGGGTCTG 59.860 63.158 31.76 22.83 46.01 3.51
554 558 1.000396 AGTTACTACCGCGGGGTCT 60.000 57.895 31.76 15.64 46.01 3.85
555 559 1.435105 GAGTTACTACCGCGGGGTC 59.565 63.158 31.76 13.39 46.01 4.46
557 561 1.606885 TTGGAGTTACTACCGCGGGG 61.607 60.000 31.76 23.39 40.11 5.73
558 562 0.247185 TTTGGAGTTACTACCGCGGG 59.753 55.000 31.76 15.62 0.00 6.13
559 563 1.353076 GTTTGGAGTTACTACCGCGG 58.647 55.000 26.86 26.86 0.00 6.46
560 564 1.353076 GGTTTGGAGTTACTACCGCG 58.647 55.000 0.00 0.00 0.00 6.46
561 565 1.002315 TGGGTTTGGAGTTACTACCGC 59.998 52.381 0.00 0.00 0.00 5.68
562 566 2.564062 TCTGGGTTTGGAGTTACTACCG 59.436 50.000 0.00 0.00 0.00 4.02
563 567 4.628963 TTCTGGGTTTGGAGTTACTACC 57.371 45.455 0.00 0.00 0.00 3.18
568 572 3.842007 TCGTTTCTGGGTTTGGAGTTA 57.158 42.857 0.00 0.00 0.00 2.24
581 585 2.033424 GGCTCTGCTTTTGTTCGTTTCT 59.967 45.455 0.00 0.00 0.00 2.52
591 597 2.273912 GCTGCTGGGCTCTGCTTTT 61.274 57.895 17.02 0.00 38.45 2.27
592 598 2.675772 GCTGCTGGGCTCTGCTTT 60.676 61.111 17.02 0.00 38.45 3.51
598 604 4.666253 TTGTGGGCTGCTGGGCTC 62.666 66.667 0.00 0.00 40.65 4.70
636 646 0.035247 CCATGGGCCATTTTGGGTTG 60.035 55.000 18.46 4.16 38.19 3.77
637 647 1.851065 GCCATGGGCCATTTTGGGTT 61.851 55.000 22.80 0.00 44.06 4.11
694 704 0.250901 GGCTCTCAAACCAGCTGGAA 60.251 55.000 39.19 18.91 38.94 3.53
709 719 0.467290 TGGGGTGTTTCAGTTGGCTC 60.467 55.000 0.00 0.00 0.00 4.70
711 721 1.739667 GTGGGGTGTTTCAGTTGGC 59.260 57.895 0.00 0.00 0.00 4.52
758 768 3.597728 GGAGTAGGCTCTCGCGGG 61.598 72.222 6.13 1.01 41.38 6.13
779 789 0.734889 GAAGGTTCGATGTGCCATGG 59.265 55.000 7.63 7.63 0.00 3.66
793 1186 1.122019 AGCCGGAGTGAAGTGAAGGT 61.122 55.000 5.05 0.00 0.00 3.50
887 1286 3.550678 GGCGGTTTATATAGCTACGCATC 59.449 47.826 19.90 4.66 46.43 3.91
917 1318 2.090210 AGTTTGGGTTTGGGAGGGAAAT 60.090 45.455 0.00 0.00 0.00 2.17
958 1364 0.886490 GGACTTGTGTGCCTCAGTGG 60.886 60.000 0.00 0.00 39.35 4.00
959 1365 0.179048 TGGACTTGTGTGCCTCAGTG 60.179 55.000 0.00 0.00 33.32 3.66
960 1366 0.179045 GTGGACTTGTGTGCCTCAGT 60.179 55.000 0.00 0.00 33.32 3.41
961 1367 0.886490 GGTGGACTTGTGTGCCTCAG 60.886 60.000 0.00 0.00 33.32 3.35
962 1368 1.148273 GGTGGACTTGTGTGCCTCA 59.852 57.895 0.00 0.00 33.32 3.86
963 1369 0.603975 GAGGTGGACTTGTGTGCCTC 60.604 60.000 0.00 0.00 36.21 4.70
1117 1526 2.606826 GACCTTGGTCCTCCCCGT 60.607 66.667 8.54 0.00 0.00 5.28
1364 1773 2.654404 GTATCTCGTCGTGGCCGC 60.654 66.667 6.11 6.11 0.00 6.53
1434 1843 1.432270 GCACCTCGGTAGCTGCATTC 61.432 60.000 3.61 0.00 0.00 2.67
1543 1955 1.450312 GCGCCATGTCAAGGTAGCT 60.450 57.895 0.00 0.00 0.00 3.32
1548 1960 3.803082 CCGTGCGCCATGTCAAGG 61.803 66.667 4.18 0.00 0.00 3.61
1659 2097 6.798207 CTGTATGTACAGTGAATCGAGAAC 57.202 41.667 11.18 0.00 46.51 3.01
1684 2128 4.810790 GTCGTCCTGGATGACCATAATAG 58.189 47.826 30.43 0.44 45.87 1.73
1724 2168 7.067372 CAGAATAGCAGGAAAAATATCACACCA 59.933 37.037 0.00 0.00 0.00 4.17
1725 2169 7.283127 TCAGAATAGCAGGAAAAATATCACACC 59.717 37.037 0.00 0.00 0.00 4.16
1726 2170 8.125448 GTCAGAATAGCAGGAAAAATATCACAC 58.875 37.037 0.00 0.00 0.00 3.82
1727 2171 7.011389 CGTCAGAATAGCAGGAAAAATATCACA 59.989 37.037 0.00 0.00 0.00 3.58
1728 2172 7.224753 TCGTCAGAATAGCAGGAAAAATATCAC 59.775 37.037 0.00 0.00 0.00 3.06
1729 2173 7.272244 TCGTCAGAATAGCAGGAAAAATATCA 58.728 34.615 0.00 0.00 0.00 2.15
1730 2174 7.715265 TCGTCAGAATAGCAGGAAAAATATC 57.285 36.000 0.00 0.00 0.00 1.63
1731 2175 8.506168 TTTCGTCAGAATAGCAGGAAAAATAT 57.494 30.769 0.00 0.00 36.09 1.28
1732 2176 7.915293 TTTCGTCAGAATAGCAGGAAAAATA 57.085 32.000 0.00 0.00 36.09 1.40
1733 2177 6.817765 TTTCGTCAGAATAGCAGGAAAAAT 57.182 33.333 0.00 0.00 36.09 1.82
1734 2178 6.627395 TTTTCGTCAGAATAGCAGGAAAAA 57.373 33.333 0.00 0.00 36.09 1.94
1738 2182 4.832248 ACATTTTCGTCAGAATAGCAGGA 58.168 39.130 0.00 0.00 36.09 3.86
1766 2210 1.873863 CGGACTCGTGTGCTCACTA 59.126 57.895 16.23 5.22 41.89 2.74
1767 2211 2.645567 CGGACTCGTGTGCTCACT 59.354 61.111 16.23 0.00 41.89 3.41
1768 2212 3.106407 GCGGACTCGTGTGCTCAC 61.106 66.667 8.86 8.86 40.79 3.51
1769 2213 2.434658 AATGCGGACTCGTGTGCTCA 62.435 55.000 4.32 4.32 38.89 4.26
1770 2214 0.457853 TAATGCGGACTCGTGTGCTC 60.458 55.000 7.53 0.00 38.89 4.26
1771 2215 0.736325 GTAATGCGGACTCGTGTGCT 60.736 55.000 7.53 0.00 38.89 4.40
1772 2216 1.708027 GTAATGCGGACTCGTGTGC 59.292 57.895 0.00 0.00 38.89 4.57
1773 2217 0.455464 TCGTAATGCGGACTCGTGTG 60.455 55.000 0.00 0.00 41.72 3.82
1774 2218 0.455633 GTCGTAATGCGGACTCGTGT 60.456 55.000 0.00 0.00 41.72 4.49
1775 2219 0.179171 AGTCGTAATGCGGACTCGTG 60.179 55.000 0.00 0.00 41.72 4.35
1776 2220 0.524862 AAGTCGTAATGCGGACTCGT 59.475 50.000 0.00 0.00 41.72 4.18
1777 2221 2.463553 TAAGTCGTAATGCGGACTCG 57.536 50.000 0.00 0.00 41.72 4.18
1778 2222 4.025015 TCTTAAGTCGTAATGCGGACTC 57.975 45.455 1.63 0.00 41.72 3.36
1779 2223 3.181489 CCTCTTAAGTCGTAATGCGGACT 60.181 47.826 1.63 0.00 41.72 3.85
1780 2224 3.114065 CCTCTTAAGTCGTAATGCGGAC 58.886 50.000 1.63 0.00 41.72 4.79
1781 2225 2.100252 CCCTCTTAAGTCGTAATGCGGA 59.900 50.000 1.63 0.00 41.72 5.54
1782 2226 2.470821 CCCTCTTAAGTCGTAATGCGG 58.529 52.381 1.63 0.00 41.72 5.69
1783 2227 1.859080 GCCCTCTTAAGTCGTAATGCG 59.141 52.381 1.63 0.00 43.01 4.73
1784 2228 1.859080 CGCCCTCTTAAGTCGTAATGC 59.141 52.381 1.63 0.00 0.00 3.56
1785 2229 1.859080 GCGCCCTCTTAAGTCGTAATG 59.141 52.381 0.00 0.00 0.00 1.90
1786 2230 1.535437 CGCGCCCTCTTAAGTCGTAAT 60.535 52.381 0.00 0.00 0.00 1.89
1787 2231 0.179156 CGCGCCCTCTTAAGTCGTAA 60.179 55.000 0.00 0.00 0.00 3.18
1788 2232 1.308069 ACGCGCCCTCTTAAGTCGTA 61.308 55.000 5.73 0.00 0.00 3.43
1789 2233 2.181021 CGCGCCCTCTTAAGTCGT 59.819 61.111 0.00 0.00 0.00 4.34
1790 2234 1.872679 GACGCGCCCTCTTAAGTCG 60.873 63.158 5.73 3.98 0.00 4.18
1791 2235 1.518792 GGACGCGCCCTCTTAAGTC 60.519 63.158 5.73 0.00 0.00 3.01
1792 2236 2.577593 GGACGCGCCCTCTTAAGT 59.422 61.111 5.73 0.00 0.00 2.24
1793 2237 2.582498 CGGACGCGCCCTCTTAAG 60.582 66.667 10.51 0.00 0.00 1.85
1794 2238 2.438951 AAACGGACGCGCCCTCTTAA 62.439 55.000 10.51 0.00 0.00 1.85
1795 2239 1.594194 TAAACGGACGCGCCCTCTTA 61.594 55.000 10.51 3.95 0.00 2.10
1796 2240 2.934570 TAAACGGACGCGCCCTCTT 61.935 57.895 10.51 4.99 0.00 2.85
1797 2241 3.376078 TAAACGGACGCGCCCTCT 61.376 61.111 10.51 0.00 0.00 3.69
1798 2242 3.184003 GTAAACGGACGCGCCCTC 61.184 66.667 10.51 0.00 0.00 4.30
1799 2243 3.993584 TGTAAACGGACGCGCCCT 61.994 61.111 10.51 0.00 0.00 5.19
1800 2244 3.781162 GTGTAAACGGACGCGCCC 61.781 66.667 5.73 2.39 0.00 6.13
1801 2245 4.125097 CGTGTAAACGGACGCGCC 62.125 66.667 5.73 7.90 45.22 6.53
1804 2248 1.202320 CCAACGTGTAAACGGACGC 59.798 57.895 10.79 0.00 39.22 5.19
1805 2249 0.503961 GTCCAACGTGTAAACGGACG 59.496 55.000 10.79 0.00 37.04 4.79
1806 2250 1.523934 CTGTCCAACGTGTAAACGGAC 59.476 52.381 10.79 8.25 45.24 4.79
1807 2251 1.538634 CCTGTCCAACGTGTAAACGGA 60.539 52.381 10.79 0.00 37.45 4.69
1808 2252 0.863144 CCTGTCCAACGTGTAAACGG 59.137 55.000 10.79 0.00 37.45 4.44
1809 2253 0.233848 GCCTGTCCAACGTGTAAACG 59.766 55.000 3.26 3.26 39.31 3.60
1810 2254 1.301423 TGCCTGTCCAACGTGTAAAC 58.699 50.000 0.00 0.00 0.00 2.01
1811 2255 2.039818 TTGCCTGTCCAACGTGTAAA 57.960 45.000 0.00 0.00 0.00 2.01
1812 2256 1.876799 CATTGCCTGTCCAACGTGTAA 59.123 47.619 0.00 0.00 0.00 2.41
1813 2257 1.202710 ACATTGCCTGTCCAACGTGTA 60.203 47.619 0.00 0.00 29.94 2.90
1814 2258 0.465460 ACATTGCCTGTCCAACGTGT 60.465 50.000 0.00 0.00 29.94 4.49
1815 2259 0.040157 CACATTGCCTGTCCAACGTG 60.040 55.000 0.00 0.00 35.29 4.49
1816 2260 1.172180 CCACATTGCCTGTCCAACGT 61.172 55.000 0.00 0.00 35.29 3.99
1817 2261 1.580942 CCACATTGCCTGTCCAACG 59.419 57.895 0.00 0.00 35.29 4.10
1818 2262 0.827507 ACCCACATTGCCTGTCCAAC 60.828 55.000 0.00 0.00 35.29 3.77
1819 2263 0.539438 GACCCACATTGCCTGTCCAA 60.539 55.000 0.00 0.00 35.29 3.53
1820 2264 1.074775 GACCCACATTGCCTGTCCA 59.925 57.895 0.00 0.00 35.29 4.02
1821 2265 0.539438 TTGACCCACATTGCCTGTCC 60.539 55.000 0.00 0.00 35.29 4.02
1822 2266 0.598065 GTTGACCCACATTGCCTGTC 59.402 55.000 0.00 0.00 35.29 3.51
1823 2267 0.106268 TGTTGACCCACATTGCCTGT 60.106 50.000 0.00 0.00 39.20 4.00
1824 2268 1.039068 TTGTTGACCCACATTGCCTG 58.961 50.000 0.00 0.00 0.00 4.85
1825 2269 1.412343 GTTTGTTGACCCACATTGCCT 59.588 47.619 0.00 0.00 0.00 4.75
1826 2270 1.137872 TGTTTGTTGACCCACATTGCC 59.862 47.619 0.00 0.00 0.00 4.52
1847 2291 2.120909 CCCGTGCAATGGCCCTAAG 61.121 63.158 0.00 0.00 43.51 2.18
1871 2325 1.188863 GCTTGAATTCAGGGTGCCAT 58.811 50.000 18.18 0.00 0.00 4.40
1878 2332 4.093556 GTCGAGTAAAGGCTTGAATTCAGG 59.906 45.833 12.97 12.97 31.29 3.86
1903 2358 7.707624 TCTCAAAGCAGGAAATGTATGAATT 57.292 32.000 0.00 0.00 0.00 2.17
1911 2366 6.071728 ACCAAGTTATCTCAAAGCAGGAAATG 60.072 38.462 0.00 0.00 0.00 2.32
1941 2396 3.328387 GACAGTGCAAGAGCCTGTTGC 62.328 57.143 18.83 18.83 45.77 4.17
1942 2397 0.590195 GACAGTGCAAGAGCCTGTTG 59.410 55.000 8.17 0.00 45.77 3.33
1956 2411 1.337071 TCTCGAAACTTCTGCGACAGT 59.663 47.619 6.72 0.00 32.61 3.55
1991 2446 1.496060 AGTCTGCATCCCGGAATACA 58.504 50.000 0.73 0.00 0.00 2.29
1999 3393 0.811616 CGCTGGTTAGTCTGCATCCC 60.812 60.000 0.00 0.00 0.00 3.85
2000 3394 0.811616 CCGCTGGTTAGTCTGCATCC 60.812 60.000 0.00 0.00 0.00 3.51
2009 3403 2.095718 GCTGTCTTTTTCCGCTGGTTAG 60.096 50.000 0.00 0.00 0.00 2.34
2030 3424 3.852572 GCAGCTCAAGTCTTTTTCTGCTG 60.853 47.826 16.52 14.89 46.28 4.41
2031 3425 2.292845 GCAGCTCAAGTCTTTTTCTGCT 59.707 45.455 16.52 5.90 41.37 4.24
2035 3429 1.956477 TGGGCAGCTCAAGTCTTTTTC 59.044 47.619 0.00 0.00 0.00 2.29
2047 3456 1.908340 GATGTGGAGAGTGGGCAGCT 61.908 60.000 0.00 0.00 0.00 4.24
2048 3457 1.451028 GATGTGGAGAGTGGGCAGC 60.451 63.158 0.00 0.00 0.00 5.25
2049 3458 1.153489 CGATGTGGAGAGTGGGCAG 60.153 63.158 0.00 0.00 0.00 4.85
2050 3459 2.981302 CGATGTGGAGAGTGGGCA 59.019 61.111 0.00 0.00 0.00 5.36
2051 3460 2.512515 GCGATGTGGAGAGTGGGC 60.513 66.667 0.00 0.00 0.00 5.36
2052 3461 0.460987 GAAGCGATGTGGAGAGTGGG 60.461 60.000 0.00 0.00 0.00 4.61
2053 3462 0.460987 GGAAGCGATGTGGAGAGTGG 60.461 60.000 0.00 0.00 0.00 4.00
2054 3463 0.247460 TGGAAGCGATGTGGAGAGTG 59.753 55.000 0.00 0.00 0.00 3.51
2055 3464 0.976641 TTGGAAGCGATGTGGAGAGT 59.023 50.000 0.00 0.00 0.00 3.24
2056 3465 1.066573 AGTTGGAAGCGATGTGGAGAG 60.067 52.381 0.00 0.00 0.00 3.20
2057 3466 0.976641 AGTTGGAAGCGATGTGGAGA 59.023 50.000 0.00 0.00 0.00 3.71
2058 3467 1.813513 AAGTTGGAAGCGATGTGGAG 58.186 50.000 0.00 0.00 0.00 3.86
2059 3468 2.270352 AAAGTTGGAAGCGATGTGGA 57.730 45.000 0.00 0.00 0.00 4.02
2060 3469 4.497473 TTTAAAGTTGGAAGCGATGTGG 57.503 40.909 0.00 0.00 0.00 4.17
2061 3470 6.205784 TCTTTTTAAAGTTGGAAGCGATGTG 58.794 36.000 2.44 0.00 37.31 3.21
2062 3471 6.385649 TCTTTTTAAAGTTGGAAGCGATGT 57.614 33.333 2.44 0.00 37.31 3.06
2063 3472 7.435192 AGTTTCTTTTTAAAGTTGGAAGCGATG 59.565 33.333 2.44 0.00 37.31 3.84
2064 3473 7.489160 AGTTTCTTTTTAAAGTTGGAAGCGAT 58.511 30.769 2.44 0.00 37.31 4.58
2065 3474 6.859017 AGTTTCTTTTTAAAGTTGGAAGCGA 58.141 32.000 2.44 0.00 37.31 4.93
2066 3475 7.274686 TGAAGTTTCTTTTTAAAGTTGGAAGCG 59.725 33.333 2.44 0.00 37.31 4.68
2067 3476 8.474006 TGAAGTTTCTTTTTAAAGTTGGAAGC 57.526 30.769 2.44 0.00 37.31 3.86
2068 3477 9.087424 CCTGAAGTTTCTTTTTAAAGTTGGAAG 57.913 33.333 2.44 0.00 37.31 3.46
2080 3489 9.889128 TCAAATTTTGATCCTGAAGTTTCTTTT 57.111 25.926 7.74 0.00 34.08 2.27
2096 3505 3.768406 CGATTCGGCCATCAAATTTTGA 58.232 40.909 13.88 13.88 45.01 2.69
2104 3513 1.078497 ACAAGCGATTCGGCCATCA 60.078 52.632 2.24 0.00 0.00 3.07
2110 3519 1.798223 TGAGTTTGACAAGCGATTCGG 59.202 47.619 8.34 0.00 0.00 4.30
2128 3537 2.739913 CGGACTCGGTAAAAATGCTTGA 59.260 45.455 0.00 0.00 0.00 3.02
2142 3551 1.468224 CCATCAGACTCAACGGACTCG 60.468 57.143 0.00 0.00 43.02 4.18
2148 3557 2.061773 GACACACCATCAGACTCAACG 58.938 52.381 0.00 0.00 0.00 4.10
2169 3579 2.169769 ACACCTCCGTTTTTGAGAGACA 59.830 45.455 0.00 0.00 31.26 3.41
2173 3583 1.673920 GCAACACCTCCGTTTTTGAGA 59.326 47.619 0.00 0.00 31.26 3.27
2174 3584 1.676006 AGCAACACCTCCGTTTTTGAG 59.324 47.619 0.00 0.00 0.00 3.02
2175 3585 1.757682 AGCAACACCTCCGTTTTTGA 58.242 45.000 0.00 0.00 0.00 2.69
2176 3586 2.459934 GAAGCAACACCTCCGTTTTTG 58.540 47.619 0.00 0.00 0.00 2.44
2178 3588 0.661020 CGAAGCAACACCTCCGTTTT 59.339 50.000 0.00 0.00 0.00 2.43
2179 3589 2.317230 CGAAGCAACACCTCCGTTT 58.683 52.632 0.00 0.00 0.00 3.60
2180 3590 4.043168 CGAAGCAACACCTCCGTT 57.957 55.556 0.00 0.00 0.00 4.44
2193 3603 3.604875 TCTACTGGGTAAAAGGCGAAG 57.395 47.619 0.00 0.00 0.00 3.79
2194 3604 4.067192 GTTTCTACTGGGTAAAAGGCGAA 58.933 43.478 0.00 0.00 0.00 4.70
2195 3605 3.325716 AGTTTCTACTGGGTAAAAGGCGA 59.674 43.478 0.00 0.00 31.99 5.54
2196 3606 3.671716 AGTTTCTACTGGGTAAAAGGCG 58.328 45.455 0.00 0.00 31.99 5.52
2197 3607 4.634883 GCTAGTTTCTACTGGGTAAAAGGC 59.365 45.833 0.00 0.00 35.78 4.35
2198 3608 5.801380 TGCTAGTTTCTACTGGGTAAAAGG 58.199 41.667 0.00 0.00 35.78 3.11
2199 3609 6.128254 GCTTGCTAGTTTCTACTGGGTAAAAG 60.128 42.308 0.00 0.00 35.78 2.27
2200 3610 5.704053 GCTTGCTAGTTTCTACTGGGTAAAA 59.296 40.000 0.00 0.00 35.78 1.52
2201 3611 5.221762 TGCTTGCTAGTTTCTACTGGGTAAA 60.222 40.000 0.00 0.00 35.78 2.01
2202 3612 4.285003 TGCTTGCTAGTTTCTACTGGGTAA 59.715 41.667 0.00 0.00 35.78 2.85
2203 3613 3.835978 TGCTTGCTAGTTTCTACTGGGTA 59.164 43.478 0.00 0.00 35.78 3.69
2204 3614 2.637872 TGCTTGCTAGTTTCTACTGGGT 59.362 45.455 0.00 0.00 35.78 4.51
2205 3615 3.334583 TGCTTGCTAGTTTCTACTGGG 57.665 47.619 0.00 0.00 35.78 4.45
2206 3616 5.886960 AATTGCTTGCTAGTTTCTACTGG 57.113 39.130 0.00 0.00 35.78 4.00
2207 3617 7.602517 AGTAATTGCTTGCTAGTTTCTACTG 57.397 36.000 0.00 0.00 35.78 2.74
2208 3618 8.311836 TGTAGTAATTGCTTGCTAGTTTCTACT 58.688 33.333 0.00 9.45 38.44 2.57
2209 3619 8.475331 TGTAGTAATTGCTTGCTAGTTTCTAC 57.525 34.615 0.00 2.82 31.29 2.59
2210 3620 7.764443 CCTGTAGTAATTGCTTGCTAGTTTCTA 59.236 37.037 0.00 0.00 31.29 2.10
2211 3621 6.595716 CCTGTAGTAATTGCTTGCTAGTTTCT 59.404 38.462 0.00 0.00 31.29 2.52
2212 3622 6.594159 TCCTGTAGTAATTGCTTGCTAGTTTC 59.406 38.462 0.00 0.00 31.29 2.78
2213 3623 6.371825 GTCCTGTAGTAATTGCTTGCTAGTTT 59.628 38.462 0.00 0.00 31.29 2.66
2214 3624 5.875359 GTCCTGTAGTAATTGCTTGCTAGTT 59.125 40.000 0.00 0.00 31.29 2.24
2216 3626 5.419542 TGTCCTGTAGTAATTGCTTGCTAG 58.580 41.667 0.00 0.00 31.29 3.42
2234 3644 9.039165 ACTGAAAATATGAAAATGGAATGTCCT 57.961 29.630 0.00 0.00 37.46 3.85
2285 3696 4.588520 AGGGAGGGGGTAATATTTAAGCT 58.411 43.478 0.00 0.00 0.00 3.74
2294 3705 4.113102 ACATTATAGGAGGGAGGGGGTAAT 59.887 45.833 0.00 0.00 0.00 1.89
2299 3710 6.045577 ACATTTTACATTATAGGAGGGAGGGG 59.954 42.308 0.00 0.00 0.00 4.79
2300 3711 7.091533 ACATTTTACATTATAGGAGGGAGGG 57.908 40.000 0.00 0.00 0.00 4.30
2301 3712 9.503399 GTAACATTTTACATTATAGGAGGGAGG 57.497 37.037 0.00 0.00 38.01 4.30
2304 3715 9.503399 GGAGTAACATTTTACATTATAGGAGGG 57.497 37.037 4.66 0.00 40.25 4.30
2305 3716 9.503399 GGGAGTAACATTTTACATTATAGGAGG 57.497 37.037 4.66 0.00 40.25 4.30
2308 3719 9.503399 GGAGGGAGTAACATTTTACATTATAGG 57.497 37.037 4.66 0.00 40.25 2.57
2311 3722 9.936329 AATGGAGGGAGTAACATTTTACATTAT 57.064 29.630 4.66 0.00 40.25 1.28
2312 3723 9.403583 GAATGGAGGGAGTAACATTTTACATTA 57.596 33.333 4.66 0.00 40.25 1.90
2313 3724 7.342026 GGAATGGAGGGAGTAACATTTTACATT 59.658 37.037 4.66 0.00 40.25 2.71
2314 3725 6.833933 GGAATGGAGGGAGTAACATTTTACAT 59.166 38.462 4.66 0.00 40.25 2.29
2315 3726 6.184789 GGAATGGAGGGAGTAACATTTTACA 58.815 40.000 4.66 0.00 40.25 2.41
2316 3727 5.593095 GGGAATGGAGGGAGTAACATTTTAC 59.407 44.000 0.00 0.00 38.34 2.01
2317 3728 5.494706 AGGGAATGGAGGGAGTAACATTTTA 59.505 40.000 0.00 0.00 34.01 1.52
2318 3729 4.294970 AGGGAATGGAGGGAGTAACATTTT 59.705 41.667 0.00 0.00 34.01 1.82
2319 3730 3.858638 AGGGAATGGAGGGAGTAACATTT 59.141 43.478 0.00 0.00 34.01 2.32
2320 3731 3.474920 AGGGAATGGAGGGAGTAACATT 58.525 45.455 0.00 0.00 36.35 2.71
2321 3732 3.151542 AGGGAATGGAGGGAGTAACAT 57.848 47.619 0.00 0.00 0.00 2.71
2322 3733 2.661176 AGGGAATGGAGGGAGTAACA 57.339 50.000 0.00 0.00 0.00 2.41
2323 3734 5.605488 TGTATAAGGGAATGGAGGGAGTAAC 59.395 44.000 0.00 0.00 0.00 2.50
2324 3735 5.795079 TGTATAAGGGAATGGAGGGAGTAA 58.205 41.667 0.00 0.00 0.00 2.24
2325 3736 5.427857 TGTATAAGGGAATGGAGGGAGTA 57.572 43.478 0.00 0.00 0.00 2.59
2326 3737 4.295905 TGTATAAGGGAATGGAGGGAGT 57.704 45.455 0.00 0.00 0.00 3.85
2327 3738 5.234466 CTTGTATAAGGGAATGGAGGGAG 57.766 47.826 0.00 0.00 0.00 4.30
2340 3751 7.807977 ATATGAGTTTGTGGCCTTGTATAAG 57.192 36.000 3.32 0.00 0.00 1.73
2341 3752 9.116067 GTAATATGAGTTTGTGGCCTTGTATAA 57.884 33.333 3.32 0.00 0.00 0.98
2342 3753 8.268605 TGTAATATGAGTTTGTGGCCTTGTATA 58.731 33.333 3.32 0.00 0.00 1.47
2343 3754 7.116075 TGTAATATGAGTTTGTGGCCTTGTAT 58.884 34.615 3.32 0.00 0.00 2.29
2344 3755 6.477253 TGTAATATGAGTTTGTGGCCTTGTA 58.523 36.000 3.32 0.00 0.00 2.41
2345 3756 5.321102 TGTAATATGAGTTTGTGGCCTTGT 58.679 37.500 3.32 0.00 0.00 3.16
2346 3757 5.163622 CCTGTAATATGAGTTTGTGGCCTTG 60.164 44.000 3.32 0.00 0.00 3.61
2347 3758 4.949856 CCTGTAATATGAGTTTGTGGCCTT 59.050 41.667 3.32 0.00 0.00 4.35
2348 3759 4.018415 ACCTGTAATATGAGTTTGTGGCCT 60.018 41.667 3.32 0.00 0.00 5.19
2349 3760 4.270008 ACCTGTAATATGAGTTTGTGGCC 58.730 43.478 0.00 0.00 0.00 5.36
2350 3761 5.296035 GGTACCTGTAATATGAGTTTGTGGC 59.704 44.000 4.06 0.00 0.00 5.01
2351 3762 6.411376 TGGTACCTGTAATATGAGTTTGTGG 58.589 40.000 14.36 0.00 0.00 4.17
2352 3763 7.822334 TCTTGGTACCTGTAATATGAGTTTGTG 59.178 37.037 14.36 0.00 0.00 3.33
2353 3764 7.913789 TCTTGGTACCTGTAATATGAGTTTGT 58.086 34.615 14.36 0.00 0.00 2.83
2354 3765 8.786826 TTCTTGGTACCTGTAATATGAGTTTG 57.213 34.615 14.36 0.00 0.00 2.93
2355 3766 9.802039 TTTTCTTGGTACCTGTAATATGAGTTT 57.198 29.630 14.36 0.00 0.00 2.66
2356 3767 9.802039 TTTTTCTTGGTACCTGTAATATGAGTT 57.198 29.630 14.36 0.00 0.00 3.01
2395 3806 8.925700 AACTAAAAGAAAAGTTGACTTGCAAAG 58.074 29.630 0.00 0.00 41.20 2.77
2396 3807 8.825667 AACTAAAAGAAAAGTTGACTTGCAAA 57.174 26.923 0.00 0.00 38.44 3.68
2397 3808 9.915629 TTAACTAAAAGAAAAGTTGACTTGCAA 57.084 25.926 0.00 0.00 36.62 4.08
2398 3809 9.349145 GTTAACTAAAAGAAAAGTTGACTTGCA 57.651 29.630 0.00 0.00 38.49 4.08
2399 3810 8.804743 GGTTAACTAAAAGAAAAGTTGACTTGC 58.195 33.333 5.42 0.00 40.29 4.01
2400 3811 9.006215 CGGTTAACTAAAAGAAAAGTTGACTTG 57.994 33.333 5.42 1.47 40.29 3.16
2401 3812 8.949177 TCGGTTAACTAAAAGAAAAGTTGACTT 58.051 29.630 5.42 0.00 40.29 3.01
2402 3813 8.496707 TCGGTTAACTAAAAGAAAAGTTGACT 57.503 30.769 5.42 0.00 40.29 3.41
2403 3814 8.606602 TCTCGGTTAACTAAAAGAAAAGTTGAC 58.393 33.333 5.42 0.00 39.93 3.18
2404 3815 8.721019 TCTCGGTTAACTAAAAGAAAAGTTGA 57.279 30.769 5.42 0.00 36.62 3.18
2405 3816 9.595357 GATCTCGGTTAACTAAAAGAAAAGTTG 57.405 33.333 5.42 0.00 36.62 3.16
2406 3817 9.333724 TGATCTCGGTTAACTAAAAGAAAAGTT 57.666 29.630 5.42 0.00 39.25 2.66
2407 3818 8.897872 TGATCTCGGTTAACTAAAAGAAAAGT 57.102 30.769 5.42 0.00 0.00 2.66
2416 3827 9.754382 GGTGTATTAATGATCTCGGTTAACTAA 57.246 33.333 5.42 0.00 0.00 2.24
2417 3828 8.916062 TGGTGTATTAATGATCTCGGTTAACTA 58.084 33.333 5.42 0.00 0.00 2.24
2418 3829 7.709613 GTGGTGTATTAATGATCTCGGTTAACT 59.290 37.037 5.42 0.00 0.00 2.24
2419 3830 7.493320 TGTGGTGTATTAATGATCTCGGTTAAC 59.507 37.037 0.00 0.00 0.00 2.01
2420 3831 7.557724 TGTGGTGTATTAATGATCTCGGTTAA 58.442 34.615 0.00 0.00 0.00 2.01
2421 3832 7.114866 TGTGGTGTATTAATGATCTCGGTTA 57.885 36.000 0.00 0.00 0.00 2.85
2422 3833 5.984725 TGTGGTGTATTAATGATCTCGGTT 58.015 37.500 0.00 0.00 0.00 4.44
2423 3834 5.607939 TGTGGTGTATTAATGATCTCGGT 57.392 39.130 0.00 0.00 0.00 4.69
2424 3835 5.050091 GCTTGTGGTGTATTAATGATCTCGG 60.050 44.000 0.00 0.00 0.00 4.63
2425 3836 5.523552 TGCTTGTGGTGTATTAATGATCTCG 59.476 40.000 0.00 0.00 0.00 4.04
2426 3837 6.925610 TGCTTGTGGTGTATTAATGATCTC 57.074 37.500 0.00 0.00 0.00 2.75
2427 3838 6.238842 GCATGCTTGTGGTGTATTAATGATCT 60.239 38.462 11.37 0.00 0.00 2.75
2428 3839 5.916883 GCATGCTTGTGGTGTATTAATGATC 59.083 40.000 11.37 0.00 0.00 2.92
2429 3840 5.360429 TGCATGCTTGTGGTGTATTAATGAT 59.640 36.000 20.33 0.00 0.00 2.45
2430 3841 4.704057 TGCATGCTTGTGGTGTATTAATGA 59.296 37.500 20.33 0.00 0.00 2.57
2431 3842 4.996344 TGCATGCTTGTGGTGTATTAATG 58.004 39.130 20.33 0.00 0.00 1.90
2432 3843 5.410067 GTTGCATGCTTGTGGTGTATTAAT 58.590 37.500 20.33 0.00 0.00 1.40
2433 3844 4.614764 CGTTGCATGCTTGTGGTGTATTAA 60.615 41.667 20.33 0.00 0.00 1.40
2434 3845 3.120025 CGTTGCATGCTTGTGGTGTATTA 60.120 43.478 20.33 0.00 0.00 0.98
2435 3846 2.351641 CGTTGCATGCTTGTGGTGTATT 60.352 45.455 20.33 0.00 0.00 1.89
2436 3847 1.199789 CGTTGCATGCTTGTGGTGTAT 59.800 47.619 20.33 0.00 0.00 2.29
2437 3848 0.590682 CGTTGCATGCTTGTGGTGTA 59.409 50.000 20.33 0.00 0.00 2.90
2438 3849 1.100463 TCGTTGCATGCTTGTGGTGT 61.100 50.000 20.33 0.00 0.00 4.16
2439 3850 0.030504 TTCGTTGCATGCTTGTGGTG 59.969 50.000 20.33 1.97 0.00 4.17
2440 3851 0.961019 ATTCGTTGCATGCTTGTGGT 59.039 45.000 20.33 0.00 0.00 4.16
2441 3852 1.068402 TCATTCGTTGCATGCTTGTGG 60.068 47.619 20.33 3.94 0.00 4.17
2442 3853 2.334971 TCATTCGTTGCATGCTTGTG 57.665 45.000 20.33 9.14 0.00 3.33
2443 3854 3.247442 CATTCATTCGTTGCATGCTTGT 58.753 40.909 20.33 0.00 0.00 3.16
2444 3855 2.601314 CCATTCATTCGTTGCATGCTTG 59.399 45.455 20.33 8.62 28.73 4.01
2445 3856 2.417651 CCCATTCATTCGTTGCATGCTT 60.418 45.455 20.33 0.00 28.73 3.91
2446 3857 1.135527 CCCATTCATTCGTTGCATGCT 59.864 47.619 20.33 0.00 28.73 3.79
2447 3858 1.563111 CCCATTCATTCGTTGCATGC 58.437 50.000 11.82 11.82 28.73 4.06
2448 3859 1.750206 TCCCCATTCATTCGTTGCATG 59.250 47.619 0.00 0.00 0.00 4.06
2449 3860 2.026641 CTCCCCATTCATTCGTTGCAT 58.973 47.619 0.00 0.00 0.00 3.96
2450 3861 1.462616 CTCCCCATTCATTCGTTGCA 58.537 50.000 0.00 0.00 0.00 4.08
2451 3862 0.740737 CCTCCCCATTCATTCGTTGC 59.259 55.000 0.00 0.00 0.00 4.17
2452 3863 2.418368 TCCTCCCCATTCATTCGTTG 57.582 50.000 0.00 0.00 0.00 4.10
2453 3864 2.308866 ACTTCCTCCCCATTCATTCGTT 59.691 45.455 0.00 0.00 0.00 3.85
2454 3865 1.916181 ACTTCCTCCCCATTCATTCGT 59.084 47.619 0.00 0.00 0.00 3.85
2455 3866 2.092968 TCACTTCCTCCCCATTCATTCG 60.093 50.000 0.00 0.00 0.00 3.34
2456 3867 3.652057 TCACTTCCTCCCCATTCATTC 57.348 47.619 0.00 0.00 0.00 2.67
2457 3868 3.373438 CCATCACTTCCTCCCCATTCATT 60.373 47.826 0.00 0.00 0.00 2.57
2458 3869 2.176364 CCATCACTTCCTCCCCATTCAT 59.824 50.000 0.00 0.00 0.00 2.57
2459 3870 1.565759 CCATCACTTCCTCCCCATTCA 59.434 52.381 0.00 0.00 0.00 2.57
2460 3871 1.846439 TCCATCACTTCCTCCCCATTC 59.154 52.381 0.00 0.00 0.00 2.67
2461 3872 1.849039 CTCCATCACTTCCTCCCCATT 59.151 52.381 0.00 0.00 0.00 3.16
2462 3873 1.274650 ACTCCATCACTTCCTCCCCAT 60.275 52.381 0.00 0.00 0.00 4.00
2463 3874 0.119155 ACTCCATCACTTCCTCCCCA 59.881 55.000 0.00 0.00 0.00 4.96
2464 3875 0.543749 CACTCCATCACTTCCTCCCC 59.456 60.000 0.00 0.00 0.00 4.81
2465 3876 1.208293 GACACTCCATCACTTCCTCCC 59.792 57.143 0.00 0.00 0.00 4.30
2466 3877 1.902508 TGACACTCCATCACTTCCTCC 59.097 52.381 0.00 0.00 0.00 4.30
2467 3878 3.902881 ATGACACTCCATCACTTCCTC 57.097 47.619 0.00 0.00 0.00 3.71
2468 3879 5.426509 TCATAATGACACTCCATCACTTCCT 59.573 40.000 0.00 0.00 0.00 3.36
2469 3880 5.525378 GTCATAATGACACTCCATCACTTCC 59.475 44.000 0.00 0.00 46.22 3.46
2470 3881 6.595772 GTCATAATGACACTCCATCACTTC 57.404 41.667 0.00 0.00 46.22 3.01
2478 3889 8.380052 ACATGCATGTAGTCATAATGACACTCC 61.380 40.741 30.50 0.00 42.13 3.85
2479 3890 6.481313 ACATGCATGTAGTCATAATGACACTC 59.519 38.462 30.50 0.00 42.13 3.51
2480 3891 6.351711 ACATGCATGTAGTCATAATGACACT 58.648 36.000 30.50 0.00 42.13 3.55
2481 3892 6.609237 ACATGCATGTAGTCATAATGACAC 57.391 37.500 30.50 0.00 42.13 3.67
2482 3893 7.986889 ACTTACATGCATGTAGTCATAATGACA 59.013 33.333 32.09 16.51 44.34 3.58
2483 3894 8.370493 ACTTACATGCATGTAGTCATAATGAC 57.630 34.615 32.09 0.00 43.44 3.06
2495 3906 9.139174 GCAACTTTTTAATACTTACATGCATGT 57.861 29.630 33.20 33.20 44.48 3.21
2496 3907 9.357652 AGCAACTTTTTAATACTTACATGCATG 57.642 29.630 25.09 25.09 0.00 4.06
2512 3923 9.516314 GATGTTTTCTTGTACTAGCAACTTTTT 57.484 29.630 15.14 4.18 0.00 1.94
2513 3924 8.682710 TGATGTTTTCTTGTACTAGCAACTTTT 58.317 29.630 15.14 5.76 0.00 2.27
2514 3925 8.220755 TGATGTTTTCTTGTACTAGCAACTTT 57.779 30.769 15.14 7.36 0.00 2.66
2515 3926 7.801716 TGATGTTTTCTTGTACTAGCAACTT 57.198 32.000 15.14 11.17 0.00 2.66
2516 3927 7.986085 ATGATGTTTTCTTGTACTAGCAACT 57.014 32.000 15.14 6.14 0.00 3.16
2526 3937 9.341078 AGGCAAAATTTAATGATGTTTTCTTGT 57.659 25.926 0.00 0.00 0.00 3.16
2527 3938 9.815936 GAGGCAAAATTTAATGATGTTTTCTTG 57.184 29.630 0.00 0.00 0.00 3.02
2528 3939 8.711457 CGAGGCAAAATTTAATGATGTTTTCTT 58.289 29.630 0.00 0.00 0.00 2.52
2529 3940 8.087750 TCGAGGCAAAATTTAATGATGTTTTCT 58.912 29.630 0.00 0.00 0.00 2.52
2530 3941 8.238481 TCGAGGCAAAATTTAATGATGTTTTC 57.762 30.769 0.00 0.00 0.00 2.29
2531 3942 8.776376 ATCGAGGCAAAATTTAATGATGTTTT 57.224 26.923 0.00 0.00 0.00 2.43
2532 3943 8.776376 AATCGAGGCAAAATTTAATGATGTTT 57.224 26.923 0.00 0.00 0.00 2.83
2533 3944 9.301153 GTAATCGAGGCAAAATTTAATGATGTT 57.699 29.630 0.00 0.00 0.00 2.71
2534 3945 8.686334 AGTAATCGAGGCAAAATTTAATGATGT 58.314 29.630 0.00 0.00 0.00 3.06
2535 3946 8.961092 CAGTAATCGAGGCAAAATTTAATGATG 58.039 33.333 0.00 0.00 0.00 3.07
2536 3947 8.686334 ACAGTAATCGAGGCAAAATTTAATGAT 58.314 29.630 5.82 0.00 0.00 2.45
2537 3948 8.050778 ACAGTAATCGAGGCAAAATTTAATGA 57.949 30.769 5.82 0.00 0.00 2.57
2538 3949 8.586273 CAACAGTAATCGAGGCAAAATTTAATG 58.414 33.333 0.00 0.00 0.00 1.90
2539 3950 7.759433 CCAACAGTAATCGAGGCAAAATTTAAT 59.241 33.333 0.00 0.00 0.00 1.40
2540 3951 7.087639 CCAACAGTAATCGAGGCAAAATTTAA 58.912 34.615 0.00 0.00 0.00 1.52
2541 3952 6.207810 ACCAACAGTAATCGAGGCAAAATTTA 59.792 34.615 0.00 0.00 0.00 1.40
2542 3953 5.010617 ACCAACAGTAATCGAGGCAAAATTT 59.989 36.000 0.00 0.00 0.00 1.82
2543 3954 4.522789 ACCAACAGTAATCGAGGCAAAATT 59.477 37.500 0.00 0.00 0.00 1.82
2544 3955 4.079253 ACCAACAGTAATCGAGGCAAAAT 58.921 39.130 0.00 0.00 0.00 1.82
2545 3956 3.252215 CACCAACAGTAATCGAGGCAAAA 59.748 43.478 0.00 0.00 0.00 2.44
2546 3957 2.811431 CACCAACAGTAATCGAGGCAAA 59.189 45.455 0.00 0.00 0.00 3.68
2547 3958 2.037902 TCACCAACAGTAATCGAGGCAA 59.962 45.455 0.00 0.00 0.00 4.52
2548 3959 1.621317 TCACCAACAGTAATCGAGGCA 59.379 47.619 0.00 0.00 0.00 4.75
2549 3960 2.000447 GTCACCAACAGTAATCGAGGC 59.000 52.381 0.00 0.00 0.00 4.70
2550 3961 2.233922 AGGTCACCAACAGTAATCGAGG 59.766 50.000 0.00 0.00 0.00 4.63
2551 3962 3.594603 AGGTCACCAACAGTAATCGAG 57.405 47.619 0.00 0.00 0.00 4.04
2552 3963 3.070446 ACAAGGTCACCAACAGTAATCGA 59.930 43.478 0.00 0.00 0.00 3.59
2553 3964 3.399330 ACAAGGTCACCAACAGTAATCG 58.601 45.455 0.00 0.00 0.00 3.34
2554 3965 6.653320 TCAATACAAGGTCACCAACAGTAATC 59.347 38.462 0.00 0.00 0.00 1.75
2555 3966 6.539173 TCAATACAAGGTCACCAACAGTAAT 58.461 36.000 0.00 0.00 0.00 1.89
2556 3967 5.931294 TCAATACAAGGTCACCAACAGTAA 58.069 37.500 0.00 0.00 0.00 2.24
2557 3968 5.554437 TCAATACAAGGTCACCAACAGTA 57.446 39.130 0.00 0.00 0.00 2.74
2558 3969 4.431416 TCAATACAAGGTCACCAACAGT 57.569 40.909 0.00 0.00 0.00 3.55
2559 3970 4.379813 GCATCAATACAAGGTCACCAACAG 60.380 45.833 0.00 0.00 0.00 3.16
2560 3971 3.505680 GCATCAATACAAGGTCACCAACA 59.494 43.478 0.00 0.00 0.00 3.33
2561 3972 3.505680 TGCATCAATACAAGGTCACCAAC 59.494 43.478 0.00 0.00 0.00 3.77
2562 3973 3.760738 TGCATCAATACAAGGTCACCAA 58.239 40.909 0.00 0.00 0.00 3.67
2563 3974 3.431673 TGCATCAATACAAGGTCACCA 57.568 42.857 0.00 0.00 0.00 4.17
2564 3975 4.782019 TTTGCATCAATACAAGGTCACC 57.218 40.909 0.00 0.00 0.00 4.02
2565 3976 6.158598 ACATTTTGCATCAATACAAGGTCAC 58.841 36.000 0.00 0.00 0.00 3.67
2566 3977 6.343716 ACATTTTGCATCAATACAAGGTCA 57.656 33.333 0.00 0.00 0.00 4.02
2567 3978 8.931385 AATACATTTTGCATCAATACAAGGTC 57.069 30.769 0.00 0.00 0.00 3.85
2568 3979 9.801873 GTAATACATTTTGCATCAATACAAGGT 57.198 29.630 0.00 0.00 0.00 3.50
2569 3980 9.800433 TGTAATACATTTTGCATCAATACAAGG 57.200 29.630 0.00 0.00 0.00 3.61
2576 3987 9.352784 GCTTAGTTGTAATACATTTTGCATCAA 57.647 29.630 0.00 0.00 0.00 2.57
2577 3988 7.973388 GGCTTAGTTGTAATACATTTTGCATCA 59.027 33.333 0.00 0.00 0.00 3.07
2578 3989 7.165812 CGGCTTAGTTGTAATACATTTTGCATC 59.834 37.037 0.00 0.00 0.00 3.91
2579 3990 6.972328 CGGCTTAGTTGTAATACATTTTGCAT 59.028 34.615 0.00 0.00 0.00 3.96
2580 3991 6.318628 CGGCTTAGTTGTAATACATTTTGCA 58.681 36.000 0.00 0.00 0.00 4.08
2581 3992 5.229260 GCGGCTTAGTTGTAATACATTTTGC 59.771 40.000 0.00 0.00 0.00 3.68
2582 3993 5.741982 GGCGGCTTAGTTGTAATACATTTTG 59.258 40.000 0.00 0.00 0.00 2.44
2583 3994 5.448089 CGGCGGCTTAGTTGTAATACATTTT 60.448 40.000 7.61 0.00 0.00 1.82
2584 3995 4.034742 CGGCGGCTTAGTTGTAATACATTT 59.965 41.667 7.61 0.00 0.00 2.32
2585 3996 3.558418 CGGCGGCTTAGTTGTAATACATT 59.442 43.478 7.61 0.00 0.00 2.71
2586 3997 3.128349 CGGCGGCTTAGTTGTAATACAT 58.872 45.455 7.61 0.00 0.00 2.29
2587 3998 2.094078 ACGGCGGCTTAGTTGTAATACA 60.094 45.455 13.24 0.00 0.00 2.29
2588 3999 2.543641 ACGGCGGCTTAGTTGTAATAC 58.456 47.619 13.24 0.00 0.00 1.89
2589 4000 2.965572 ACGGCGGCTTAGTTGTAATA 57.034 45.000 13.24 0.00 0.00 0.98
2590 4001 2.965572 TACGGCGGCTTAGTTGTAAT 57.034 45.000 13.24 0.00 0.00 1.89
2591 4002 2.428171 AGATACGGCGGCTTAGTTGTAA 59.572 45.455 13.24 0.00 0.00 2.41
2592 4003 2.026641 AGATACGGCGGCTTAGTTGTA 58.973 47.619 13.24 0.57 0.00 2.41
2593 4004 0.822164 AGATACGGCGGCTTAGTTGT 59.178 50.000 13.24 0.00 0.00 3.32
2594 4005 1.593006 CAAGATACGGCGGCTTAGTTG 59.407 52.381 13.24 6.69 0.00 3.16
2595 4006 1.206371 ACAAGATACGGCGGCTTAGTT 59.794 47.619 13.24 0.00 0.00 2.24
2596 4007 0.822164 ACAAGATACGGCGGCTTAGT 59.178 50.000 13.24 9.57 0.00 2.24
2597 4008 1.209128 CACAAGATACGGCGGCTTAG 58.791 55.000 13.24 9.01 0.00 2.18
2598 4009 0.808453 GCACAAGATACGGCGGCTTA 60.808 55.000 13.24 1.55 0.00 3.09
2599 4010 2.106683 GCACAAGATACGGCGGCTT 61.107 57.895 13.24 9.01 0.00 4.35
2600 4011 2.511600 GCACAAGATACGGCGGCT 60.512 61.111 13.24 2.10 0.00 5.52
2601 4012 2.105960 GATGCACAAGATACGGCGGC 62.106 60.000 13.24 0.00 0.00 6.53
2602 4013 1.498865 GGATGCACAAGATACGGCGG 61.499 60.000 13.24 0.00 0.00 6.13
2603 4014 1.821241 CGGATGCACAAGATACGGCG 61.821 60.000 4.80 4.80 0.00 6.46
2604 4015 1.934463 CGGATGCACAAGATACGGC 59.066 57.895 0.00 0.00 0.00 5.68
2605 4016 1.498865 GGCGGATGCACAAGATACGG 61.499 60.000 0.00 0.00 45.35 4.02
2606 4017 1.498865 GGGCGGATGCACAAGATACG 61.499 60.000 0.00 0.00 46.60 3.06
2607 4018 2.321213 GGGCGGATGCACAAGATAC 58.679 57.895 0.00 0.00 46.60 2.24
2608 4019 4.876701 GGGCGGATGCACAAGATA 57.123 55.556 0.00 0.00 46.60 1.98
2617 4028 0.751277 TATTGCTTGGTGGGCGGATG 60.751 55.000 0.00 0.00 0.00 3.51
2618 4029 0.185901 ATATTGCTTGGTGGGCGGAT 59.814 50.000 0.00 0.00 0.00 4.18
2619 4030 0.751277 CATATTGCTTGGTGGGCGGA 60.751 55.000 0.00 0.00 0.00 5.54
2620 4031 1.037030 ACATATTGCTTGGTGGGCGG 61.037 55.000 0.00 0.00 0.00 6.13
2621 4032 0.101040 CACATATTGCTTGGTGGGCG 59.899 55.000 0.00 0.00 0.00 6.13
2622 4033 1.185315 ACACATATTGCTTGGTGGGC 58.815 50.000 0.00 0.00 35.62 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.