Multiple sequence alignment - TraesCS2B01G409400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G409400 chr2B 100.000 3681 0 0 1 3681 582811054 582807374 0.000000e+00 6798.0
1 TraesCS2B01G409400 chr2B 83.023 430 68 4 1 427 682165917 682166344 5.770000e-103 385.0
2 TraesCS2B01G409400 chr2D 95.942 1380 50 4 1891 3267 495101440 495100064 0.000000e+00 2233.0
3 TraesCS2B01G409400 chr2D 89.221 1271 68 27 641 1886 495102620 495101394 0.000000e+00 1524.0
4 TraesCS2B01G409400 chr2D 98.896 453 5 0 3229 3681 495100033 495099581 0.000000e+00 809.0
5 TraesCS2B01G409400 chr2D 86.207 261 20 7 431 686 495118415 495118166 6.060000e-68 268.0
6 TraesCS2B01G409400 chr2D 88.889 171 18 1 3054 3223 129947147 129947317 3.720000e-50 209.0
7 TraesCS2B01G409400 chr2D 82.524 206 21 10 440 639 495104275 495104079 2.270000e-37 167.0
8 TraesCS2B01G409400 chr2D 93.069 101 7 0 2324 2424 129946662 129946762 8.240000e-32 148.0
9 TraesCS2B01G409400 chr2D 100.000 36 0 0 3226 3261 495100070 495100035 2.370000e-07 67.6
10 TraesCS2B01G409400 chr2A 94.499 1127 49 4 1891 3017 638682577 638683690 0.000000e+00 1725.0
11 TraesCS2B01G409400 chr2A 90.416 1179 62 28 711 1883 638681487 638682620 0.000000e+00 1504.0
12 TraesCS2B01G409400 chr2A 94.887 665 20 3 3016 3680 638684133 638684783 0.000000e+00 1027.0
13 TraesCS2B01G409400 chr2A 94.253 261 14 1 3016 3276 638683798 638684057 7.410000e-107 398.0
14 TraesCS2B01G409400 chr5B 86.014 429 55 5 1 427 524526743 524527168 4.330000e-124 455.0
15 TraesCS2B01G409400 chr3D 84.340 447 45 14 1 426 110586502 110586944 7.350000e-112 414.0
16 TraesCS2B01G409400 chr4B 82.889 450 55 6 1 430 401886254 401885807 5.770000e-103 385.0
17 TraesCS2B01G409400 chr6D 82.889 450 54 13 1 429 328617262 328617709 2.070000e-102 383.0
18 TraesCS2B01G409400 chr6B 82.628 449 54 10 1 429 565218989 565218545 3.470000e-100 375.0
19 TraesCS2B01G409400 chr7A 81.735 438 68 11 1 431 573131755 573131323 4.520000e-94 355.0
20 TraesCS2B01G409400 chr1D 82.407 432 52 13 1 410 250734577 250735006 4.520000e-94 355.0
21 TraesCS2B01G409400 chr1D 85.616 292 42 0 138 429 69527592 69527301 1.280000e-79 307.0
22 TraesCS2B01G409400 chr1D 92.810 153 11 0 1 153 69527767 69527615 4.780000e-54 222.0
23 TraesCS2B01G409400 chr7B 83.463 387 53 10 1 380 203888106 203888488 2.100000e-92 350.0
24 TraesCS2B01G409400 chr5D 81.465 437 60 14 1 429 6527253 6527676 4.550000e-89 339.0
25 TraesCS2B01G409400 chr5D 89.937 159 15 1 3066 3223 361590885 361591043 1.730000e-48 204.0
26 TraesCS2B01G409400 chr5D 92.308 104 8 0 2319 2422 361590383 361590486 8.240000e-32 148.0
27 TraesCS2B01G409400 chr4D 85.324 293 43 0 138 430 319684942 319685234 1.660000e-78 303.0
28 TraesCS2B01G409400 chr1A 89.412 170 17 1 3054 3223 497217656 497217824 2.880000e-51 213.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G409400 chr2B 582807374 582811054 3680 True 6798.00 6798 100.00000 1 3681 1 chr2B.!!$R1 3680
1 TraesCS2B01G409400 chr2D 495099581 495104275 4694 True 960.12 2233 93.31660 440 3681 5 chr2D.!!$R2 3241
2 TraesCS2B01G409400 chr2A 638681487 638684783 3296 False 1163.50 1725 93.51375 711 3680 4 chr2A.!!$F1 2969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.028902 GCGTATTGCCGACCCAAATC 59.971 55.0 0.00 0.0 37.76 2.17 F
768 2246 0.036164 TCACCACCCAACATCTTCCG 59.964 55.0 0.00 0.0 0.00 4.30 F
1849 3344 0.107312 CTCTGATGACAGGGGCCAAG 60.107 60.0 4.39 0.0 43.60 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1859 3354 0.106894 CCATCCTTCTTAGGCGGACC 59.893 60.0 0.00 0.0 41.69 4.46 R
1865 3360 0.250081 GGCGAGCCATCCTTCTTAGG 60.250 60.0 9.58 0.0 38.29 2.69 R
2929 4424 0.035458 AGTCTCAAGCCAAACCCTCG 59.965 55.0 0.00 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.230603 AAGATGCAGGCCGACATG 57.769 55.556 17.07 1.62 0.00 3.21
18 19 2.117156 AAGATGCAGGCCGACATGC 61.117 57.895 17.07 12.61 42.86 4.06
19 20 2.515523 GATGCAGGCCGACATGCT 60.516 61.111 17.07 2.82 42.98 3.79
20 21 2.515523 ATGCAGGCCGACATGCTC 60.516 61.111 10.24 0.00 42.98 4.26
21 22 3.333899 ATGCAGGCCGACATGCTCA 62.334 57.895 10.24 0.00 42.98 4.26
22 23 2.747460 GCAGGCCGACATGCTCAA 60.747 61.111 0.00 0.00 39.38 3.02
23 24 2.758089 GCAGGCCGACATGCTCAAG 61.758 63.158 0.00 0.00 39.38 3.02
24 25 1.376424 CAGGCCGACATGCTCAAGT 60.376 57.895 0.00 0.00 0.00 3.16
25 26 0.957395 CAGGCCGACATGCTCAAGTT 60.957 55.000 0.00 0.00 0.00 2.66
26 27 0.674895 AGGCCGACATGCTCAAGTTC 60.675 55.000 0.00 0.00 0.00 3.01
27 28 0.955428 GGCCGACATGCTCAAGTTCA 60.955 55.000 0.00 0.00 0.00 3.18
28 29 0.874390 GCCGACATGCTCAAGTTCAA 59.126 50.000 0.00 0.00 0.00 2.69
29 30 1.400242 GCCGACATGCTCAAGTTCAAC 60.400 52.381 0.00 0.00 0.00 3.18
30 31 1.136252 CCGACATGCTCAAGTTCAACG 60.136 52.381 0.00 0.00 0.00 4.10
31 32 1.792367 CGACATGCTCAAGTTCAACGA 59.208 47.619 0.00 0.00 0.00 3.85
32 33 2.410262 CGACATGCTCAAGTTCAACGAC 60.410 50.000 0.00 0.00 0.00 4.34
33 34 1.526887 ACATGCTCAAGTTCAACGACG 59.473 47.619 0.00 0.00 0.00 5.12
34 35 1.792367 CATGCTCAAGTTCAACGACGA 59.208 47.619 0.00 0.00 0.00 4.20
35 36 1.487482 TGCTCAAGTTCAACGACGAG 58.513 50.000 0.00 0.00 0.00 4.18
36 37 1.202371 TGCTCAAGTTCAACGACGAGT 60.202 47.619 0.00 0.00 0.00 4.18
37 38 1.190323 GCTCAAGTTCAACGACGAGTG 59.810 52.381 0.00 0.00 0.00 3.51
38 39 2.727777 CTCAAGTTCAACGACGAGTGA 58.272 47.619 0.00 1.46 0.00 3.41
39 40 2.456989 TCAAGTTCAACGACGAGTGAC 58.543 47.619 0.00 0.67 0.00 3.67
40 41 1.521423 CAAGTTCAACGACGAGTGACC 59.479 52.381 0.00 0.00 0.00 4.02
41 42 1.030457 AGTTCAACGACGAGTGACCT 58.970 50.000 0.00 0.00 0.00 3.85
42 43 2.224606 AGTTCAACGACGAGTGACCTA 58.775 47.619 0.00 0.00 0.00 3.08
43 44 2.818432 AGTTCAACGACGAGTGACCTAT 59.182 45.455 0.00 0.00 0.00 2.57
44 45 2.913777 TCAACGACGAGTGACCTATG 57.086 50.000 0.00 0.00 0.00 2.23
45 46 1.471287 TCAACGACGAGTGACCTATGG 59.529 52.381 0.00 0.00 0.00 2.74
46 47 0.172803 AACGACGAGTGACCTATGGC 59.827 55.000 0.00 0.00 0.00 4.40
47 48 1.298413 CGACGAGTGACCTATGGCG 60.298 63.158 0.00 0.00 0.00 5.69
48 49 1.065928 GACGAGTGACCTATGGCGG 59.934 63.158 0.00 0.00 0.00 6.13
49 50 2.279517 CGAGTGACCTATGGCGGC 60.280 66.667 0.00 0.00 0.00 6.53
50 51 2.279517 GAGTGACCTATGGCGGCG 60.280 66.667 0.51 0.51 0.00 6.46
51 52 2.758327 AGTGACCTATGGCGGCGA 60.758 61.111 12.98 0.00 0.00 5.54
52 53 2.185867 GTGACCTATGGCGGCGAA 59.814 61.111 12.98 0.00 0.00 4.70
53 54 2.171725 GTGACCTATGGCGGCGAAC 61.172 63.158 12.98 2.36 0.00 3.95
84 85 2.697431 TTTTATGCCGACAAGTGTGC 57.303 45.000 0.00 0.00 0.00 4.57
85 86 1.890876 TTTATGCCGACAAGTGTGCT 58.109 45.000 0.00 0.00 0.00 4.40
86 87 1.155889 TTATGCCGACAAGTGTGCTG 58.844 50.000 0.00 0.00 0.00 4.41
87 88 0.673333 TATGCCGACAAGTGTGCTGG 60.673 55.000 0.00 0.00 0.00 4.85
88 89 4.030452 GCCGACAAGTGTGCTGGC 62.030 66.667 3.91 3.91 35.04 4.85
89 90 2.591429 CCGACAAGTGTGCTGGCA 60.591 61.111 0.00 0.00 0.00 4.92
90 91 1.968017 CCGACAAGTGTGCTGGCAT 60.968 57.895 0.00 0.00 0.00 4.40
91 92 1.208358 CGACAAGTGTGCTGGCATG 59.792 57.895 0.00 0.00 0.00 4.06
92 93 1.229975 CGACAAGTGTGCTGGCATGA 61.230 55.000 0.00 0.00 0.00 3.07
93 94 0.239347 GACAAGTGTGCTGGCATGAC 59.761 55.000 0.00 0.00 0.00 3.06
94 95 1.174712 ACAAGTGTGCTGGCATGACC 61.175 55.000 0.00 0.00 39.84 4.02
96 97 1.174712 AAGTGTGCTGGCATGACCAC 61.175 55.000 0.00 0.00 46.36 4.16
97 98 2.669229 TGTGCTGGCATGACCACG 60.669 61.111 0.00 0.00 46.36 4.94
98 99 3.434319 GTGCTGGCATGACCACGG 61.434 66.667 0.00 0.00 46.36 4.94
119 120 4.657824 CGGTGGCGTGGTCGAACT 62.658 66.667 0.33 0.00 39.71 3.01
120 121 2.737376 GGTGGCGTGGTCGAACTC 60.737 66.667 0.33 0.00 39.71 3.01
121 122 2.737376 GTGGCGTGGTCGAACTCC 60.737 66.667 0.33 0.69 39.71 3.85
122 123 3.998672 TGGCGTGGTCGAACTCCC 61.999 66.667 0.33 2.56 39.71 4.30
124 125 4.353437 GCGTGGTCGAACTCCCGT 62.353 66.667 0.33 0.00 39.71 5.28
125 126 2.126580 CGTGGTCGAACTCCCGTC 60.127 66.667 0.33 0.00 39.71 4.79
126 127 2.623915 CGTGGTCGAACTCCCGTCT 61.624 63.158 0.33 0.00 39.71 4.18
127 128 1.212229 GTGGTCGAACTCCCGTCTC 59.788 63.158 0.33 0.00 0.00 3.36
128 129 1.074423 TGGTCGAACTCCCGTCTCT 59.926 57.895 0.33 0.00 0.00 3.10
129 130 0.538977 TGGTCGAACTCCCGTCTCTT 60.539 55.000 0.33 0.00 0.00 2.85
130 131 0.602060 GGTCGAACTCCCGTCTCTTT 59.398 55.000 0.00 0.00 0.00 2.52
131 132 1.000618 GGTCGAACTCCCGTCTCTTTT 59.999 52.381 0.00 0.00 0.00 2.27
132 133 2.547430 GGTCGAACTCCCGTCTCTTTTT 60.547 50.000 0.00 0.00 0.00 1.94
133 134 2.475487 GTCGAACTCCCGTCTCTTTTTG 59.525 50.000 0.00 0.00 0.00 2.44
134 135 2.101917 TCGAACTCCCGTCTCTTTTTGT 59.898 45.455 0.00 0.00 0.00 2.83
135 136 2.221055 CGAACTCCCGTCTCTTTTTGTG 59.779 50.000 0.00 0.00 0.00 3.33
136 137 3.203716 GAACTCCCGTCTCTTTTTGTGT 58.796 45.455 0.00 0.00 0.00 3.72
137 138 2.561569 ACTCCCGTCTCTTTTTGTGTG 58.438 47.619 0.00 0.00 0.00 3.82
138 139 1.264288 CTCCCGTCTCTTTTTGTGTGC 59.736 52.381 0.00 0.00 0.00 4.57
139 140 1.134220 TCCCGTCTCTTTTTGTGTGCT 60.134 47.619 0.00 0.00 0.00 4.40
140 141 1.002468 CCCGTCTCTTTTTGTGTGCTG 60.002 52.381 0.00 0.00 0.00 4.41
141 142 1.002468 CCGTCTCTTTTTGTGTGCTGG 60.002 52.381 0.00 0.00 0.00 4.85
142 143 1.597937 CGTCTCTTTTTGTGTGCTGGC 60.598 52.381 0.00 0.00 0.00 4.85
143 144 1.405105 GTCTCTTTTTGTGTGCTGGCA 59.595 47.619 0.00 0.00 0.00 4.92
144 145 2.035066 GTCTCTTTTTGTGTGCTGGCAT 59.965 45.455 0.00 0.00 0.00 4.40
145 146 2.034939 TCTCTTTTTGTGTGCTGGCATG 59.965 45.455 0.00 0.00 0.00 4.06
146 147 1.755959 TCTTTTTGTGTGCTGGCATGT 59.244 42.857 0.00 0.00 0.00 3.21
147 148 1.862201 CTTTTTGTGTGCTGGCATGTG 59.138 47.619 0.00 0.00 0.00 3.21
148 149 0.822811 TTTTGTGTGCTGGCATGTGT 59.177 45.000 0.00 0.00 0.00 3.72
149 150 0.102663 TTTGTGTGCTGGCATGTGTG 59.897 50.000 0.00 0.00 0.00 3.82
158 159 3.654201 GCATGTGTGCCGACTGAA 58.346 55.556 0.00 0.00 45.76 3.02
159 160 1.207593 GCATGTGTGCCGACTGAAC 59.792 57.895 0.00 0.00 45.76 3.18
160 161 1.230635 GCATGTGTGCCGACTGAACT 61.231 55.000 0.00 0.00 45.76 3.01
161 162 1.939381 GCATGTGTGCCGACTGAACTA 60.939 52.381 0.00 0.00 45.76 2.24
162 163 2.621338 CATGTGTGCCGACTGAACTAT 58.379 47.619 0.00 0.00 0.00 2.12
163 164 2.078849 TGTGTGCCGACTGAACTATG 57.921 50.000 0.00 0.00 0.00 2.23
164 165 0.721718 GTGTGCCGACTGAACTATGC 59.278 55.000 0.00 0.00 0.00 3.14
165 166 0.735978 TGTGCCGACTGAACTATGCG 60.736 55.000 0.00 0.00 0.00 4.73
166 167 1.153647 TGCCGACTGAACTATGCGG 60.154 57.895 0.00 0.00 44.47 5.69
167 168 1.153628 GCCGACTGAACTATGCGGT 60.154 57.895 0.00 0.00 43.61 5.68
168 169 1.421410 GCCGACTGAACTATGCGGTG 61.421 60.000 0.00 0.00 43.61 4.94
169 170 0.108804 CCGACTGAACTATGCGGTGT 60.109 55.000 0.00 0.00 37.35 4.16
170 171 1.671850 CCGACTGAACTATGCGGTGTT 60.672 52.381 0.00 0.00 37.35 3.32
171 172 2.066262 CGACTGAACTATGCGGTGTTT 58.934 47.619 0.00 0.00 0.00 2.83
172 173 2.478894 CGACTGAACTATGCGGTGTTTT 59.521 45.455 0.00 0.00 0.00 2.43
173 174 3.059188 CGACTGAACTATGCGGTGTTTTT 60.059 43.478 0.00 0.00 0.00 1.94
174 175 4.464112 GACTGAACTATGCGGTGTTTTTC 58.536 43.478 0.00 0.00 0.00 2.29
175 176 4.134563 ACTGAACTATGCGGTGTTTTTCT 58.865 39.130 0.00 0.00 0.00 2.52
176 177 4.024048 ACTGAACTATGCGGTGTTTTTCTG 60.024 41.667 0.00 0.00 0.00 3.02
177 178 4.130857 TGAACTATGCGGTGTTTTTCTGA 58.869 39.130 0.00 0.00 0.00 3.27
178 179 4.576873 TGAACTATGCGGTGTTTTTCTGAA 59.423 37.500 0.00 0.00 0.00 3.02
179 180 4.749245 ACTATGCGGTGTTTTTCTGAAG 57.251 40.909 0.00 0.00 0.00 3.02
180 181 2.422276 ATGCGGTGTTTTTCTGAAGC 57.578 45.000 0.00 0.00 0.00 3.86
181 182 1.388547 TGCGGTGTTTTTCTGAAGCT 58.611 45.000 0.00 0.00 0.00 3.74
182 183 1.065401 TGCGGTGTTTTTCTGAAGCTG 59.935 47.619 0.00 0.00 0.00 4.24
183 184 1.600413 GCGGTGTTTTTCTGAAGCTGG 60.600 52.381 0.00 0.00 0.00 4.85
184 185 1.600413 CGGTGTTTTTCTGAAGCTGGC 60.600 52.381 0.00 0.00 0.00 4.85
185 186 1.408702 GGTGTTTTTCTGAAGCTGGCA 59.591 47.619 0.00 0.00 0.00 4.92
186 187 2.036346 GGTGTTTTTCTGAAGCTGGCAT 59.964 45.455 0.00 0.00 0.00 4.40
187 188 3.493176 GGTGTTTTTCTGAAGCTGGCATT 60.493 43.478 0.00 0.00 0.00 3.56
188 189 3.492011 GTGTTTTTCTGAAGCTGGCATTG 59.508 43.478 0.00 0.00 0.00 2.82
189 190 3.132646 TGTTTTTCTGAAGCTGGCATTGT 59.867 39.130 0.00 0.00 0.00 2.71
190 191 4.340666 TGTTTTTCTGAAGCTGGCATTGTA 59.659 37.500 0.00 0.00 0.00 2.41
191 192 5.010922 TGTTTTTCTGAAGCTGGCATTGTAT 59.989 36.000 0.00 0.00 0.00 2.29
192 193 4.707030 TTTCTGAAGCTGGCATTGTATG 57.293 40.909 0.00 0.00 0.00 2.39
193 194 3.354948 TCTGAAGCTGGCATTGTATGT 57.645 42.857 0.00 0.00 0.00 2.29
194 195 3.273434 TCTGAAGCTGGCATTGTATGTC 58.727 45.455 0.00 0.00 34.88 3.06
195 196 2.009051 TGAAGCTGGCATTGTATGTCG 58.991 47.619 0.00 0.00 37.81 4.35
196 197 1.331756 GAAGCTGGCATTGTATGTCGG 59.668 52.381 0.00 0.00 44.00 4.79
198 199 1.643292 CTGGCATTGTATGTCGGCG 59.357 57.895 0.00 0.00 37.81 6.46
199 200 2.327940 GGCATTGTATGTCGGCGC 59.672 61.111 0.00 0.00 0.00 6.53
200 201 2.180204 GGCATTGTATGTCGGCGCT 61.180 57.895 7.64 0.00 0.00 5.92
201 202 1.010797 GCATTGTATGTCGGCGCTG 60.011 57.895 10.86 10.86 0.00 5.18
202 203 1.643292 CATTGTATGTCGGCGCTGG 59.357 57.895 17.88 4.31 0.00 4.85
203 204 2.180204 ATTGTATGTCGGCGCTGGC 61.180 57.895 15.49 15.49 38.90 4.85
204 205 2.867793 ATTGTATGTCGGCGCTGGCA 62.868 55.000 27.99 27.99 42.47 4.92
205 206 2.588877 GTATGTCGGCGCTGGCAT 60.589 61.111 35.98 35.98 42.47 4.40
206 207 2.180204 GTATGTCGGCGCTGGCATT 61.180 57.895 38.41 23.03 42.47 3.56
207 208 0.878523 GTATGTCGGCGCTGGCATTA 60.879 55.000 38.41 22.04 42.47 1.90
208 209 0.034756 TATGTCGGCGCTGGCATTAT 59.965 50.000 38.41 20.54 42.47 1.28
209 210 1.509644 ATGTCGGCGCTGGCATTATG 61.510 55.000 30.03 0.00 42.47 1.90
210 211 3.279116 TCGGCGCTGGCATTATGC 61.279 61.111 17.88 8.93 44.08 3.14
211 212 3.282157 CGGCGCTGGCATTATGCT 61.282 61.111 17.13 0.00 44.28 3.79
212 213 2.333938 GGCGCTGGCATTATGCTG 59.666 61.111 17.13 11.08 44.28 4.41
213 214 2.333938 GCGCTGGCATTATGCTGG 59.666 61.111 17.13 10.70 44.28 4.85
214 215 2.333938 CGCTGGCATTATGCTGGC 59.666 61.111 17.13 18.04 44.28 4.85
218 219 3.516911 TGGCATTATGCTGGCATGA 57.483 47.368 17.13 10.12 45.62 3.07
219 220 1.777941 TGGCATTATGCTGGCATGAA 58.222 45.000 17.13 8.55 45.62 2.57
220 221 1.409790 TGGCATTATGCTGGCATGAAC 59.590 47.619 17.13 6.73 45.62 3.18
221 222 1.684983 GGCATTATGCTGGCATGAACT 59.315 47.619 17.13 0.00 44.28 3.01
222 223 2.886523 GGCATTATGCTGGCATGAACTA 59.113 45.455 17.13 0.00 44.28 2.24
223 224 3.508793 GGCATTATGCTGGCATGAACTAT 59.491 43.478 17.13 1.97 44.28 2.12
224 225 4.482386 GCATTATGCTGGCATGAACTATG 58.518 43.478 17.09 12.51 40.96 2.23
225 226 4.617530 GCATTATGCTGGCATGAACTATGG 60.618 45.833 17.09 1.36 40.96 2.74
226 227 1.991121 ATGCTGGCATGAACTATGGG 58.009 50.000 7.31 0.00 37.26 4.00
227 228 0.625316 TGCTGGCATGAACTATGGGT 59.375 50.000 0.00 0.00 37.26 4.51
228 229 1.027357 GCTGGCATGAACTATGGGTG 58.973 55.000 0.00 0.00 37.26 4.61
229 230 1.408683 GCTGGCATGAACTATGGGTGA 60.409 52.381 0.00 0.00 37.26 4.02
230 231 2.292267 CTGGCATGAACTATGGGTGAC 58.708 52.381 0.00 0.00 37.26 3.67
231 232 1.299541 GGCATGAACTATGGGTGACG 58.700 55.000 0.00 0.00 37.26 4.35
232 233 1.134521 GGCATGAACTATGGGTGACGA 60.135 52.381 0.00 0.00 37.26 4.20
233 234 1.933853 GCATGAACTATGGGTGACGAC 59.066 52.381 0.00 0.00 37.26 4.34
234 235 2.676750 GCATGAACTATGGGTGACGACA 60.677 50.000 0.00 0.00 37.26 4.35
235 236 3.797039 CATGAACTATGGGTGACGACAT 58.203 45.455 0.00 0.00 32.95 3.06
236 237 3.245518 TGAACTATGGGTGACGACATG 57.754 47.619 0.00 0.00 0.00 3.21
237 238 2.829120 TGAACTATGGGTGACGACATGA 59.171 45.455 0.00 0.00 0.00 3.07
238 239 2.961526 ACTATGGGTGACGACATGAC 57.038 50.000 0.00 0.00 0.00 3.06
239 240 1.480954 ACTATGGGTGACGACATGACC 59.519 52.381 0.00 0.00 0.00 4.02
240 241 0.458260 TATGGGTGACGACATGACCG 59.542 55.000 0.00 5.14 0.00 4.79
241 242 2.813908 GGGTGACGACATGACCGC 60.814 66.667 0.00 0.33 0.00 5.68
242 243 2.261671 GGTGACGACATGACCGCT 59.738 61.111 0.00 0.00 0.00 5.52
243 244 2.094659 GGTGACGACATGACCGCTG 61.095 63.158 0.00 0.00 0.00 5.18
244 245 2.094659 GTGACGACATGACCGCTGG 61.095 63.158 0.00 0.00 0.00 4.85
245 246 3.188786 GACGACATGACCGCTGGC 61.189 66.667 0.00 0.00 0.00 4.85
246 247 3.932580 GACGACATGACCGCTGGCA 62.933 63.158 0.00 0.00 0.00 4.92
247 248 2.512286 CGACATGACCGCTGGCAT 60.512 61.111 0.00 0.00 0.00 4.40
248 249 2.816360 CGACATGACCGCTGGCATG 61.816 63.158 21.17 21.17 40.42 4.06
249 250 1.450134 GACATGACCGCTGGCATGA 60.450 57.895 28.38 0.00 38.51 3.07
250 251 0.816825 GACATGACCGCTGGCATGAT 60.817 55.000 28.38 13.72 38.51 2.45
251 252 0.816825 ACATGACCGCTGGCATGATC 60.817 55.000 28.38 3.50 38.51 2.92
252 253 0.534427 CATGACCGCTGGCATGATCT 60.534 55.000 18.43 0.00 38.51 2.75
253 254 1.051008 ATGACCGCTGGCATGATCTA 58.949 50.000 0.00 0.00 0.00 1.98
254 255 1.051008 TGACCGCTGGCATGATCTAT 58.949 50.000 0.00 0.00 0.00 1.98
255 256 1.270465 TGACCGCTGGCATGATCTATG 60.270 52.381 0.00 0.00 39.88 2.23
256 257 0.035881 ACCGCTGGCATGATCTATGG 59.964 55.000 0.00 0.00 37.26 2.74
262 263 2.168947 GCATGATCTATGGCTGCGG 58.831 57.895 0.00 0.00 37.26 5.69
263 264 0.321034 GCATGATCTATGGCTGCGGA 60.321 55.000 0.00 0.00 37.26 5.54
264 265 1.678123 GCATGATCTATGGCTGCGGAT 60.678 52.381 0.00 0.00 37.26 4.18
265 266 2.277969 CATGATCTATGGCTGCGGATC 58.722 52.381 0.00 12.89 36.21 3.36
266 267 0.610174 TGATCTATGGCTGCGGATCC 59.390 55.000 0.00 0.00 35.18 3.36
267 268 0.901124 GATCTATGGCTGCGGATCCT 59.099 55.000 10.75 0.00 31.32 3.24
268 269 1.277557 GATCTATGGCTGCGGATCCTT 59.722 52.381 10.75 0.00 31.32 3.36
269 270 1.131638 TCTATGGCTGCGGATCCTTT 58.868 50.000 10.75 0.00 0.00 3.11
270 271 1.490490 TCTATGGCTGCGGATCCTTTT 59.510 47.619 10.75 0.00 0.00 2.27
271 272 1.876156 CTATGGCTGCGGATCCTTTTC 59.124 52.381 10.75 0.00 0.00 2.29
272 273 0.034186 ATGGCTGCGGATCCTTTTCA 60.034 50.000 10.75 2.31 0.00 2.69
273 274 0.251121 TGGCTGCGGATCCTTTTCAA 60.251 50.000 10.75 0.00 0.00 2.69
274 275 1.106285 GGCTGCGGATCCTTTTCAAT 58.894 50.000 10.75 0.00 0.00 2.57
275 276 2.297701 GGCTGCGGATCCTTTTCAATA 58.702 47.619 10.75 0.00 0.00 1.90
276 277 2.887152 GGCTGCGGATCCTTTTCAATAT 59.113 45.455 10.75 0.00 0.00 1.28
277 278 3.319122 GGCTGCGGATCCTTTTCAATATT 59.681 43.478 10.75 0.00 0.00 1.28
278 279 4.202151 GGCTGCGGATCCTTTTCAATATTT 60.202 41.667 10.75 0.00 0.00 1.40
279 280 5.009610 GGCTGCGGATCCTTTTCAATATTTA 59.990 40.000 10.75 0.00 0.00 1.40
280 281 5.915196 GCTGCGGATCCTTTTCAATATTTAC 59.085 40.000 10.75 0.00 0.00 2.01
281 282 6.055231 TGCGGATCCTTTTCAATATTTACG 57.945 37.500 10.75 0.00 0.00 3.18
282 283 5.587043 TGCGGATCCTTTTCAATATTTACGT 59.413 36.000 10.75 0.00 0.00 3.57
283 284 5.907391 GCGGATCCTTTTCAATATTTACGTG 59.093 40.000 10.75 0.00 0.00 4.49
284 285 5.907391 CGGATCCTTTTCAATATTTACGTGC 59.093 40.000 10.75 0.00 0.00 5.34
285 286 5.907391 GGATCCTTTTCAATATTTACGTGCG 59.093 40.000 3.84 0.00 0.00 5.34
286 287 5.224562 TCCTTTTCAATATTTACGTGCGG 57.775 39.130 0.00 0.00 0.00 5.69
287 288 4.936411 TCCTTTTCAATATTTACGTGCGGA 59.064 37.500 0.00 0.00 0.00 5.54
288 289 5.025826 CCTTTTCAATATTTACGTGCGGAC 58.974 41.667 0.00 0.00 0.00 4.79
289 290 5.391097 CCTTTTCAATATTTACGTGCGGACA 60.391 40.000 8.11 0.00 0.00 4.02
290 291 5.804692 TTTCAATATTTACGTGCGGACAT 57.195 34.783 8.11 0.00 0.00 3.06
291 292 4.787381 TCAATATTTACGTGCGGACATG 57.213 40.909 8.11 0.00 38.85 3.21
292 293 4.434520 TCAATATTTACGTGCGGACATGA 58.565 39.130 8.11 0.00 36.58 3.07
293 294 4.870991 TCAATATTTACGTGCGGACATGAA 59.129 37.500 8.11 0.00 36.58 2.57
294 295 5.351740 TCAATATTTACGTGCGGACATGAAA 59.648 36.000 8.11 4.23 36.58 2.69
295 296 6.037720 TCAATATTTACGTGCGGACATGAAAT 59.962 34.615 8.11 11.20 36.58 2.17
305 306 2.408835 CATGAAATGGGTCGCGGC 59.591 61.111 6.13 3.04 41.79 6.53
306 307 2.828549 ATGAAATGGGTCGCGGCC 60.829 61.111 24.67 24.67 0.00 6.13
329 330 3.580916 GCGTATTGCCGACCCAAA 58.419 55.556 0.00 0.00 37.76 3.28
330 331 2.103410 GCGTATTGCCGACCCAAAT 58.897 52.632 0.00 0.00 37.76 2.32
331 332 0.028902 GCGTATTGCCGACCCAAATC 59.971 55.000 0.00 0.00 37.76 2.17
332 333 1.663695 CGTATTGCCGACCCAAATCT 58.336 50.000 0.00 0.00 0.00 2.40
333 334 2.014128 CGTATTGCCGACCCAAATCTT 58.986 47.619 0.00 0.00 0.00 2.40
334 335 3.199677 CGTATTGCCGACCCAAATCTTA 58.800 45.455 0.00 0.00 0.00 2.10
335 336 3.623960 CGTATTGCCGACCCAAATCTTAA 59.376 43.478 0.00 0.00 0.00 1.85
336 337 4.095185 CGTATTGCCGACCCAAATCTTAAA 59.905 41.667 0.00 0.00 0.00 1.52
337 338 4.718940 ATTGCCGACCCAAATCTTAAAG 57.281 40.909 0.00 0.00 0.00 1.85
338 339 3.426787 TGCCGACCCAAATCTTAAAGA 57.573 42.857 0.00 0.00 0.00 2.52
339 340 3.343617 TGCCGACCCAAATCTTAAAGAG 58.656 45.455 0.00 0.00 0.00 2.85
340 341 2.683362 GCCGACCCAAATCTTAAAGAGG 59.317 50.000 0.00 0.00 0.00 3.69
341 342 3.279434 CCGACCCAAATCTTAAAGAGGG 58.721 50.000 0.00 0.00 42.07 4.30
342 343 2.683362 CGACCCAAATCTTAAAGAGGGC 59.317 50.000 0.00 0.00 39.97 5.19
343 344 2.683362 GACCCAAATCTTAAAGAGGGCG 59.317 50.000 0.00 0.00 39.97 6.13
344 345 2.024414 CCCAAATCTTAAAGAGGGCGG 58.976 52.381 0.00 0.00 0.00 6.13
345 346 2.356741 CCCAAATCTTAAAGAGGGCGGA 60.357 50.000 0.00 0.00 0.00 5.54
346 347 2.683362 CCAAATCTTAAAGAGGGCGGAC 59.317 50.000 0.00 0.00 0.00 4.79
347 348 2.311124 AATCTTAAAGAGGGCGGACG 57.689 50.000 0.00 0.00 0.00 4.79
348 349 0.179081 ATCTTAAAGAGGGCGGACGC 60.179 55.000 8.39 8.39 41.06 5.19
374 375 3.047877 CGGCCGACCCAAACAGAC 61.048 66.667 24.07 0.00 0.00 3.51
375 376 2.112297 GGCCGACCCAAACAGACA 59.888 61.111 0.00 0.00 0.00 3.41
376 377 1.966451 GGCCGACCCAAACAGACAG 60.966 63.158 0.00 0.00 0.00 3.51
377 378 1.070786 GCCGACCCAAACAGACAGA 59.929 57.895 0.00 0.00 0.00 3.41
378 379 0.534203 GCCGACCCAAACAGACAGAA 60.534 55.000 0.00 0.00 0.00 3.02
379 380 1.961793 CCGACCCAAACAGACAGAAA 58.038 50.000 0.00 0.00 0.00 2.52
380 381 2.294074 CCGACCCAAACAGACAGAAAA 58.706 47.619 0.00 0.00 0.00 2.29
381 382 2.032924 CCGACCCAAACAGACAGAAAAC 59.967 50.000 0.00 0.00 0.00 2.43
382 383 2.286184 CGACCCAAACAGACAGAAAACG 60.286 50.000 0.00 0.00 0.00 3.60
383 384 2.021457 ACCCAAACAGACAGAAAACGG 58.979 47.619 0.00 0.00 0.00 4.44
384 385 2.294074 CCCAAACAGACAGAAAACGGA 58.706 47.619 0.00 0.00 0.00 4.69
385 386 2.032924 CCCAAACAGACAGAAAACGGAC 59.967 50.000 0.00 0.00 0.00 4.79
386 387 2.680841 CCAAACAGACAGAAAACGGACA 59.319 45.455 0.00 0.00 0.00 4.02
387 388 3.127895 CCAAACAGACAGAAAACGGACAA 59.872 43.478 0.00 0.00 0.00 3.18
388 389 4.380023 CCAAACAGACAGAAAACGGACAAA 60.380 41.667 0.00 0.00 0.00 2.83
389 390 5.157781 CAAACAGACAGAAAACGGACAAAA 58.842 37.500 0.00 0.00 0.00 2.44
390 391 5.379732 AACAGACAGAAAACGGACAAAAA 57.620 34.783 0.00 0.00 0.00 1.94
391 392 4.729595 ACAGACAGAAAACGGACAAAAAC 58.270 39.130 0.00 0.00 0.00 2.43
392 393 3.783943 CAGACAGAAAACGGACAAAAACG 59.216 43.478 0.00 0.00 0.00 3.60
393 394 2.521996 ACAGAAAACGGACAAAAACGC 58.478 42.857 0.00 0.00 0.00 4.84
394 395 1.849829 CAGAAAACGGACAAAAACGCC 59.150 47.619 0.00 0.00 0.00 5.68
398 399 2.250190 CGGACAAAAACGCCGTCC 59.750 61.111 0.00 0.00 44.79 4.79
399 400 2.640989 GGACAAAAACGCCGTCCC 59.359 61.111 0.00 0.00 42.87 4.46
400 401 1.895231 GGACAAAAACGCCGTCCCT 60.895 57.895 0.00 0.00 42.87 4.20
401 402 1.449726 GGACAAAAACGCCGTCCCTT 61.450 55.000 0.00 0.00 42.87 3.95
402 403 0.382873 GACAAAAACGCCGTCCCTTT 59.617 50.000 0.00 0.00 0.00 3.11
403 404 0.101579 ACAAAAACGCCGTCCCTTTG 59.898 50.000 14.21 14.21 34.04 2.77
404 405 0.596341 CAAAAACGCCGTCCCTTTGG 60.596 55.000 10.04 0.00 0.00 3.28
405 406 0.752376 AAAAACGCCGTCCCTTTGGA 60.752 50.000 0.00 0.00 38.75 3.53
406 407 0.538746 AAAACGCCGTCCCTTTGGAT 60.539 50.000 0.00 0.00 44.28 3.41
407 408 0.958876 AAACGCCGTCCCTTTGGATC 60.959 55.000 0.00 0.00 44.28 3.36
408 409 2.890474 CGCCGTCCCTTTGGATCG 60.890 66.667 0.00 0.00 44.28 3.69
410 411 2.513897 CCGTCCCTTTGGATCGGC 60.514 66.667 8.81 0.00 44.28 5.54
411 412 2.890474 CGTCCCTTTGGATCGGCG 60.890 66.667 0.00 0.00 44.28 6.46
412 413 3.202706 GTCCCTTTGGATCGGCGC 61.203 66.667 0.00 0.00 44.28 6.53
413 414 4.830765 TCCCTTTGGATCGGCGCG 62.831 66.667 0.00 0.00 35.03 6.86
416 417 4.228097 CTTTGGATCGGCGCGCTG 62.228 66.667 33.66 33.66 0.00 5.18
427 428 2.181777 CGCGCTGGAGTTGCTCTA 59.818 61.111 5.56 0.00 0.00 2.43
428 429 1.446099 CGCGCTGGAGTTGCTCTAA 60.446 57.895 5.56 0.00 0.00 2.10
429 430 1.687494 CGCGCTGGAGTTGCTCTAAC 61.687 60.000 5.56 0.00 39.65 2.34
430 431 1.687494 GCGCTGGAGTTGCTCTAACG 61.687 60.000 0.00 1.87 44.15 3.18
431 432 0.109272 CGCTGGAGTTGCTCTAACGA 60.109 55.000 0.00 0.00 44.15 3.85
432 433 1.469940 CGCTGGAGTTGCTCTAACGAT 60.470 52.381 0.00 0.00 44.15 3.73
433 434 1.929836 GCTGGAGTTGCTCTAACGATG 59.070 52.381 0.00 0.00 44.15 3.84
434 435 2.417379 GCTGGAGTTGCTCTAACGATGA 60.417 50.000 0.00 0.00 44.15 2.92
435 436 3.849911 CTGGAGTTGCTCTAACGATGAA 58.150 45.455 0.00 0.00 44.15 2.57
436 437 4.245660 CTGGAGTTGCTCTAACGATGAAA 58.754 43.478 0.00 0.00 44.15 2.69
437 438 4.245660 TGGAGTTGCTCTAACGATGAAAG 58.754 43.478 0.00 0.00 44.15 2.62
438 439 3.619038 GGAGTTGCTCTAACGATGAAAGG 59.381 47.826 0.00 0.00 44.15 3.11
486 490 3.909430 TGCACTACAGTAACACTACAGC 58.091 45.455 0.00 0.00 0.00 4.40
487 491 3.251571 GCACTACAGTAACACTACAGCC 58.748 50.000 0.00 0.00 0.00 4.85
488 492 3.846360 CACTACAGTAACACTACAGCCC 58.154 50.000 0.00 0.00 0.00 5.19
489 493 3.510360 CACTACAGTAACACTACAGCCCT 59.490 47.826 0.00 0.00 0.00 5.19
490 494 4.703575 CACTACAGTAACACTACAGCCCTA 59.296 45.833 0.00 0.00 0.00 3.53
491 495 4.704057 ACTACAGTAACACTACAGCCCTAC 59.296 45.833 0.00 0.00 0.00 3.18
505 509 3.774528 CTACGGGGCAGCAGCTGA 61.775 66.667 27.39 2.55 41.70 4.26
582 588 3.357079 CCAGGACGCCACTGTTGC 61.357 66.667 0.00 0.00 34.16 4.17
584 590 1.005037 CAGGACGCCACTGTTGCTA 60.005 57.895 2.24 0.00 0.00 3.49
589 595 2.094659 CGCCACTGTTGCTACTCCG 61.095 63.158 2.24 0.00 0.00 4.63
590 596 1.004918 GCCACTGTTGCTACTCCGT 60.005 57.895 0.00 0.00 0.00 4.69
598 605 0.863144 TTGCTACTCCGTCGCAAAAC 59.137 50.000 3.83 0.00 40.33 2.43
606 613 1.493750 CGTCGCAAAACGTGGCATA 59.506 52.632 7.71 0.00 44.19 3.14
629 636 0.326264 AAGGTTAGGTGAGCCTGCAG 59.674 55.000 6.78 6.78 46.47 4.41
642 649 2.668212 TGCAGTGCAGCGTTACCC 60.668 61.111 15.37 0.00 37.31 3.69
652 2117 0.824595 AGCGTTACCCAACCCAAACC 60.825 55.000 0.00 0.00 0.00 3.27
670 2135 2.665165 ACCATGTCCTTGCTCAACAAA 58.335 42.857 0.00 0.00 37.96 2.83
686 2151 4.564769 TCAACAAAGCCAAACGTTTTGATC 59.435 37.500 15.68 3.80 43.31 2.92
687 2152 3.112580 ACAAAGCCAAACGTTTTGATCG 58.887 40.909 15.68 7.15 43.31 3.69
688 2153 3.181495 ACAAAGCCAAACGTTTTGATCGA 60.181 39.130 15.68 0.00 43.31 3.59
689 2154 3.701532 AAGCCAAACGTTTTGATCGAA 57.298 38.095 15.68 0.00 0.00 3.71
690 2155 3.701532 AGCCAAACGTTTTGATCGAAA 57.298 38.095 15.68 3.86 0.00 3.46
691 2156 3.368495 AGCCAAACGTTTTGATCGAAAC 58.632 40.909 23.53 23.53 36.43 2.78
693 2158 3.420904 GCCAAACGTTTTGATCGAAACTC 59.579 43.478 28.00 10.44 37.37 3.01
694 2159 3.972502 CCAAACGTTTTGATCGAAACTCC 59.027 43.478 28.00 9.84 37.37 3.85
695 2160 3.515071 AACGTTTTGATCGAAACTCCG 57.485 42.857 28.00 20.44 37.37 4.63
696 2161 2.746269 ACGTTTTGATCGAAACTCCGA 58.254 42.857 28.00 0.00 43.16 4.55
697 2162 3.125316 ACGTTTTGATCGAAACTCCGAA 58.875 40.909 28.00 0.00 42.22 4.30
698 2163 3.183775 ACGTTTTGATCGAAACTCCGAAG 59.816 43.478 28.00 17.49 42.22 3.79
699 2164 3.423123 CGTTTTGATCGAAACTCCGAAGG 60.423 47.826 28.00 12.77 42.22 3.46
730 2202 0.319040 CCATGGCGATTCGATCTCGT 60.319 55.000 10.88 0.00 40.80 4.18
733 2205 2.303676 GGCGATTCGATCTCGTGCC 61.304 63.158 10.88 8.53 40.80 5.01
736 2208 1.560923 CGATTCGATCTCGTGCCTTT 58.439 50.000 0.00 0.00 40.80 3.11
737 2209 1.927174 CGATTCGATCTCGTGCCTTTT 59.073 47.619 0.00 0.00 40.80 2.27
738 2210 2.285256 CGATTCGATCTCGTGCCTTTTG 60.285 50.000 0.00 0.00 40.80 2.44
739 2211 0.796312 TTCGATCTCGTGCCTTTTGC 59.204 50.000 0.00 0.00 40.80 3.68
740 2212 0.037326 TCGATCTCGTGCCTTTTGCT 60.037 50.000 0.00 0.00 40.80 3.91
741 2213 0.095935 CGATCTCGTGCCTTTTGCTG 59.904 55.000 0.00 0.00 42.00 4.41
751 2229 2.491298 TGCCTTTTGCTGCGAAATATCA 59.509 40.909 15.02 10.34 42.00 2.15
764 2242 4.199310 CGAAATATCACCACCCAACATCT 58.801 43.478 0.00 0.00 0.00 2.90
765 2243 4.640201 CGAAATATCACCACCCAACATCTT 59.360 41.667 0.00 0.00 0.00 2.40
766 2244 5.220854 CGAAATATCACCACCCAACATCTTC 60.221 44.000 0.00 0.00 0.00 2.87
767 2245 2.514458 ATCACCACCCAACATCTTCC 57.486 50.000 0.00 0.00 0.00 3.46
768 2246 0.036164 TCACCACCCAACATCTTCCG 59.964 55.000 0.00 0.00 0.00 4.30
769 2247 0.960364 CACCACCCAACATCTTCCGG 60.960 60.000 0.00 0.00 0.00 5.14
771 2249 1.378514 CACCCAACATCTTCCGGGG 60.379 63.158 0.00 0.00 43.52 5.73
772 2250 2.275418 CCCAACATCTTCCGGGGG 59.725 66.667 0.00 0.00 34.81 5.40
793 2271 2.542824 GGAGAAGAGAAGAGGCGAATCG 60.543 54.545 0.00 0.00 0.00 3.34
824 2303 1.680555 GGGCAATATGGTCCGAACACA 60.681 52.381 0.00 0.00 0.00 3.72
826 2305 1.670811 GCAATATGGTCCGAACACAGG 59.329 52.381 0.00 0.00 0.00 4.00
841 2320 1.303643 CAGGCGGGCTTTCCTTTCT 60.304 57.895 0.00 0.00 0.00 2.52
883 2362 1.592223 CGTTCCTCCGCTTCCTTCT 59.408 57.895 0.00 0.00 0.00 2.85
965 2444 4.741239 TGGTCTCCTGCCCCTCCC 62.741 72.222 0.00 0.00 0.00 4.30
966 2445 4.423209 GGTCTCCTGCCCCTCCCT 62.423 72.222 0.00 0.00 0.00 4.20
967 2446 2.766229 GTCTCCTGCCCCTCCCTC 60.766 72.222 0.00 0.00 0.00 4.30
968 2447 4.465446 TCTCCTGCCCCTCCCTCG 62.465 72.222 0.00 0.00 0.00 4.63
1135 2618 1.446366 GTAATCACTCCTCCCCGGC 59.554 63.158 0.00 0.00 0.00 6.13
1187 2670 5.676532 TTATTCGGTCGATTCTCTCTCTC 57.323 43.478 0.00 0.00 0.00 3.20
1189 2672 2.828877 TCGGTCGATTCTCTCTCTCTC 58.171 52.381 0.00 0.00 0.00 3.20
1196 2679 0.992695 TTCTCTCTCTCTCCACCGGA 59.007 55.000 9.46 0.00 0.00 5.14
1237 2720 0.120377 TAATCTCCACCCACCCACCT 59.880 55.000 0.00 0.00 0.00 4.00
1290 2773 2.755876 AGCGACGGATGCTCCTCA 60.756 61.111 0.00 0.00 38.62 3.86
1310 2793 7.895759 TCCTCATTGATTCGGAAAGAAAAATT 58.104 30.769 0.00 0.00 42.91 1.82
1311 2794 8.028938 TCCTCATTGATTCGGAAAGAAAAATTC 58.971 33.333 0.00 0.00 42.91 2.17
1312 2795 7.008628 CCTCATTGATTCGGAAAGAAAAATTCG 59.991 37.037 0.00 0.00 42.91 3.34
1313 2796 7.589395 TCATTGATTCGGAAAGAAAAATTCGA 58.411 30.769 0.00 0.00 42.91 3.71
1314 2797 7.537306 TCATTGATTCGGAAAGAAAAATTCGAC 59.463 33.333 0.00 0.00 42.91 4.20
1320 2803 4.378046 CGGAAAGAAAAATTCGACCATCGT 60.378 41.667 0.00 0.00 41.35 3.73
1347 2830 0.371645 GTGAGGAGAAATCGCTTGCG 59.628 55.000 8.87 8.87 0.00 4.85
1509 3004 4.207281 CTCGGGCTTCATCCGCGA 62.207 66.667 8.23 0.00 46.43 5.87
1771 3266 2.203153 GTGGTGGTCAAGCGTGGT 60.203 61.111 0.00 0.00 0.00 4.16
1797 3292 0.322975 CGGCCTAGGAGGGATGATTG 59.677 60.000 14.75 0.00 35.37 2.67
1833 3328 3.325753 GGTGAGTGCTGGGCCTCT 61.326 66.667 4.53 0.00 30.89 3.69
1841 3336 1.153208 GCTGGGCCTCTGATGACAG 60.153 63.158 4.53 0.00 44.66 3.51
1842 3337 1.525923 CTGGGCCTCTGATGACAGG 59.474 63.158 4.53 0.00 43.60 4.00
1843 3338 1.980784 CTGGGCCTCTGATGACAGGG 61.981 65.000 4.53 0.00 43.66 4.45
1847 3342 3.731547 CTCTGATGACAGGGGCCA 58.268 61.111 4.39 0.00 43.60 5.36
1848 3343 1.993653 CTCTGATGACAGGGGCCAA 59.006 57.895 4.39 0.00 43.60 4.52
1849 3344 0.107312 CTCTGATGACAGGGGCCAAG 60.107 60.000 4.39 0.00 43.60 3.61
1850 3345 1.751927 CTGATGACAGGGGCCAAGC 60.752 63.158 4.39 0.00 40.14 4.01
1851 3346 2.825836 GATGACAGGGGCCAAGCG 60.826 66.667 4.39 0.00 0.00 4.68
1872 3367 3.777910 GCCCGGTCCGCCTAAGAA 61.778 66.667 5.50 0.00 0.00 2.52
1873 3368 2.499685 CCCGGTCCGCCTAAGAAG 59.500 66.667 5.50 0.00 0.00 2.85
1874 3369 2.499685 CCGGTCCGCCTAAGAAGG 59.500 66.667 5.50 0.00 46.76 3.46
1884 3379 3.297391 CTAAGAAGGATGGCTCGCC 57.703 57.895 0.00 0.00 0.00 5.54
1885 3380 0.598680 CTAAGAAGGATGGCTCGCCG 60.599 60.000 3.14 0.00 39.42 6.46
1886 3381 2.028125 TAAGAAGGATGGCTCGCCGG 62.028 60.000 0.00 0.00 39.42 6.13
1932 3427 2.592308 GCCTCGGAAGGATGGCTT 59.408 61.111 0.00 0.00 46.67 4.35
1934 3429 1.821332 CCTCGGAAGGATGGCTTGC 60.821 63.158 0.00 0.00 46.67 4.01
2023 3518 1.137825 GTCTCGCCTTCTGACGGAG 59.862 63.158 4.10 0.51 0.00 4.63
2076 3571 2.159212 TCGTCACGGACAAGAAAGACAA 60.159 45.455 0.00 0.00 32.09 3.18
2079 3574 3.372822 GTCACGGACAAGAAAGACAACAA 59.627 43.478 0.00 0.00 32.09 2.83
2233 3728 1.531365 CTTGGCCAAGGAACCTGCA 60.531 57.895 34.08 1.53 34.87 4.41
2414 3909 0.962356 AAAATCCACCTGCGGCTCTG 60.962 55.000 0.00 0.00 0.00 3.35
2443 3938 2.867624 TCAATTGCAGACAAGAAGGCT 58.132 42.857 0.00 0.00 39.69 4.58
2467 3962 1.133253 CAACGTTGCATCTGCTCCG 59.867 57.895 16.51 7.91 42.66 4.63
2508 4003 0.801872 CGCAAACCGACATTGATGGA 59.198 50.000 6.05 0.00 40.02 3.41
2545 4040 0.251916 TTACACCCAATGAGGCTCGG 59.748 55.000 10.42 7.32 35.39 4.63
2584 4079 1.064946 CCGCAAACCTCGCAAACAA 59.935 52.632 0.00 0.00 0.00 2.83
2605 4100 8.579682 AACAATTTCTGCTGAACTTTTATGAC 57.420 30.769 5.41 0.00 31.02 3.06
2619 4114 8.851541 AACTTTTATGACGAGGTACCAAATAA 57.148 30.769 15.94 7.53 0.00 1.40
2629 4124 5.583457 CGAGGTACCAAATAATCCGAAGTTT 59.417 40.000 15.94 0.00 0.00 2.66
2642 4137 1.531149 CGAAGTTTTGTGTCCTCGCAT 59.469 47.619 0.00 0.00 33.92 4.73
2736 4231 6.706270 TCACATAGTTGAAAGAACACCTCTTC 59.294 38.462 0.00 0.00 44.00 2.87
2763 4258 1.518056 AAATGCAGTGCACAGGACGG 61.518 55.000 22.44 2.04 43.04 4.79
2805 4300 6.943718 TCCATCATCGGTAGTTTTAGGTTTTT 59.056 34.615 0.00 0.00 0.00 1.94
2806 4301 7.120138 TCCATCATCGGTAGTTTTAGGTTTTTC 59.880 37.037 0.00 0.00 0.00 2.29
2810 4305 9.558396 TCATCGGTAGTTTTAGGTTTTTCTTTA 57.442 29.630 0.00 0.00 0.00 1.85
2922 4417 0.177141 ATACCACCATCCGTCCAACG 59.823 55.000 0.00 0.00 42.11 4.10
2939 4434 4.426313 GAGGCCCCGAGGGTTTGG 62.426 72.222 7.48 0.00 46.51 3.28
2971 4466 6.036517 ACTGAATTTGTATGAATCTCGTCAGC 59.963 38.462 0.00 0.00 0.00 4.26
2985 4480 2.481568 TCGTCAGCTCATGCAAAAAGAG 59.518 45.455 0.00 0.00 42.74 2.85
3035 4639 7.701539 TTGATATTTGTCTGCCATAAGTTGT 57.298 32.000 0.00 0.00 0.00 3.32
3047 4651 5.239306 TGCCATAAGTTGTTGAAACTCTCAG 59.761 40.000 0.00 0.00 34.81 3.35
3124 4728 6.268387 AGACCAGAAATGTTGAAACCAATGAT 59.732 34.615 0.00 0.00 0.00 2.45
3276 5252 3.350833 AGAACAAACCCATCATCTCTGC 58.649 45.455 0.00 0.00 0.00 4.26
3611 5587 4.159135 ACATGAATCCTTGAATGTTCTGCC 59.841 41.667 0.00 0.00 28.99 4.85
3620 5596 3.237746 TGAATGTTCTGCCCCATCAAAA 58.762 40.909 0.00 0.00 0.00 2.44
3659 5635 4.747810 CCGGCTCAAGCAAAAAGATAATT 58.252 39.130 4.13 0.00 44.36 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.117156 GCATGTCGGCCTGCATCTT 61.117 57.895 12.62 0.00 36.47 2.40
1 2 2.515523 GCATGTCGGCCTGCATCT 60.516 61.111 12.62 0.00 36.47 2.90
2 3 2.515523 AGCATGTCGGCCTGCATC 60.516 61.111 19.43 7.35 38.47 3.91
3 4 2.515523 GAGCATGTCGGCCTGCAT 60.516 61.111 19.43 9.89 38.47 3.96
4 5 3.549900 TTGAGCATGTCGGCCTGCA 62.550 57.895 19.43 7.94 38.47 4.41
5 6 2.747460 TTGAGCATGTCGGCCTGC 60.747 61.111 9.43 9.43 36.66 4.85
6 7 0.957395 AACTTGAGCATGTCGGCCTG 60.957 55.000 0.00 0.00 0.00 4.85
7 8 0.674895 GAACTTGAGCATGTCGGCCT 60.675 55.000 0.00 0.00 0.00 5.19
8 9 0.955428 TGAACTTGAGCATGTCGGCC 60.955 55.000 0.00 0.00 0.00 6.13
9 10 0.874390 TTGAACTTGAGCATGTCGGC 59.126 50.000 0.00 0.00 0.00 5.54
10 11 1.136252 CGTTGAACTTGAGCATGTCGG 60.136 52.381 0.00 0.00 0.00 4.79
11 12 1.792367 TCGTTGAACTTGAGCATGTCG 59.208 47.619 0.00 0.00 0.00 4.35
12 13 2.410262 CGTCGTTGAACTTGAGCATGTC 60.410 50.000 0.00 0.00 0.00 3.06
13 14 1.526887 CGTCGTTGAACTTGAGCATGT 59.473 47.619 0.00 0.00 0.00 3.21
14 15 1.792367 TCGTCGTTGAACTTGAGCATG 59.208 47.619 0.00 0.00 0.00 4.06
15 16 2.061773 CTCGTCGTTGAACTTGAGCAT 58.938 47.619 0.00 0.00 0.00 3.79
16 17 1.202371 ACTCGTCGTTGAACTTGAGCA 60.202 47.619 7.82 0.00 0.00 4.26
17 18 1.190323 CACTCGTCGTTGAACTTGAGC 59.810 52.381 7.82 0.00 0.00 4.26
18 19 2.468040 GTCACTCGTCGTTGAACTTGAG 59.532 50.000 6.74 6.74 0.00 3.02
19 20 2.456989 GTCACTCGTCGTTGAACTTGA 58.543 47.619 0.00 0.00 0.00 3.02
20 21 1.521423 GGTCACTCGTCGTTGAACTTG 59.479 52.381 7.22 0.00 0.00 3.16
21 22 1.407979 AGGTCACTCGTCGTTGAACTT 59.592 47.619 10.26 0.00 0.00 2.66
22 23 1.030457 AGGTCACTCGTCGTTGAACT 58.970 50.000 10.26 10.26 0.00 3.01
23 24 2.693797 TAGGTCACTCGTCGTTGAAC 57.306 50.000 6.56 6.56 0.00 3.18
24 25 2.094906 CCATAGGTCACTCGTCGTTGAA 60.095 50.000 0.00 0.00 0.00 2.69
25 26 1.471287 CCATAGGTCACTCGTCGTTGA 59.529 52.381 0.00 0.00 0.00 3.18
26 27 1.909376 CCATAGGTCACTCGTCGTTG 58.091 55.000 0.00 0.00 0.00 4.10
27 28 0.172803 GCCATAGGTCACTCGTCGTT 59.827 55.000 0.00 0.00 0.00 3.85
28 29 1.807886 GCCATAGGTCACTCGTCGT 59.192 57.895 0.00 0.00 0.00 4.34
29 30 1.298413 CGCCATAGGTCACTCGTCG 60.298 63.158 0.00 0.00 0.00 5.12
30 31 1.065928 CCGCCATAGGTCACTCGTC 59.934 63.158 0.00 0.00 0.00 4.20
31 32 3.077519 GCCGCCATAGGTCACTCGT 62.078 63.158 0.00 0.00 0.00 4.18
32 33 2.279517 GCCGCCATAGGTCACTCG 60.280 66.667 0.00 0.00 0.00 4.18
33 34 2.279517 CGCCGCCATAGGTCACTC 60.280 66.667 0.00 0.00 0.00 3.51
34 35 2.355986 TTCGCCGCCATAGGTCACT 61.356 57.895 0.00 0.00 0.00 3.41
35 36 2.171725 GTTCGCCGCCATAGGTCAC 61.172 63.158 0.00 0.00 0.00 3.67
36 37 2.185867 GTTCGCCGCCATAGGTCA 59.814 61.111 0.00 0.00 0.00 4.02
37 38 2.960129 CGTTCGCCGCCATAGGTC 60.960 66.667 0.00 0.00 0.00 3.85
64 65 2.621055 AGCACACTTGTCGGCATAAAAA 59.379 40.909 0.00 0.00 0.00 1.94
65 66 2.031245 CAGCACACTTGTCGGCATAAAA 60.031 45.455 0.00 0.00 0.00 1.52
66 67 1.535028 CAGCACACTTGTCGGCATAAA 59.465 47.619 0.00 0.00 0.00 1.40
67 68 1.155889 CAGCACACTTGTCGGCATAA 58.844 50.000 0.00 0.00 0.00 1.90
68 69 0.673333 CCAGCACACTTGTCGGCATA 60.673 55.000 0.00 0.00 0.00 3.14
69 70 1.968017 CCAGCACACTTGTCGGCAT 60.968 57.895 0.00 0.00 0.00 4.40
70 71 2.591429 CCAGCACACTTGTCGGCA 60.591 61.111 0.00 0.00 0.00 5.69
71 72 4.030452 GCCAGCACACTTGTCGGC 62.030 66.667 0.00 0.00 0.00 5.54
72 73 1.968017 ATGCCAGCACACTTGTCGG 60.968 57.895 0.00 0.00 0.00 4.79
73 74 1.208358 CATGCCAGCACACTTGTCG 59.792 57.895 0.00 0.00 0.00 4.35
74 75 0.239347 GTCATGCCAGCACACTTGTC 59.761 55.000 0.00 0.00 0.00 3.18
75 76 1.174712 GGTCATGCCAGCACACTTGT 61.175 55.000 0.00 0.00 37.17 3.16
76 77 1.174078 TGGTCATGCCAGCACACTTG 61.174 55.000 4.93 0.00 43.61 3.16
77 78 1.151221 TGGTCATGCCAGCACACTT 59.849 52.632 4.93 0.00 43.61 3.16
78 79 2.838360 TGGTCATGCCAGCACACT 59.162 55.556 4.93 0.00 43.61 3.55
102 103 4.657824 AGTTCGACCACGCCACCG 62.658 66.667 0.00 0.00 39.58 4.94
103 104 2.737376 GAGTTCGACCACGCCACC 60.737 66.667 0.00 0.00 39.58 4.61
104 105 2.737376 GGAGTTCGACCACGCCAC 60.737 66.667 5.27 0.00 36.66 5.01
105 106 3.998672 GGGAGTTCGACCACGCCA 61.999 66.667 11.46 0.00 38.33 5.69
107 108 4.353437 ACGGGAGTTCGACCACGC 62.353 66.667 3.58 0.00 43.33 5.34
118 119 1.264288 GCACACAAAAAGAGACGGGAG 59.736 52.381 0.00 0.00 0.00 4.30
119 120 1.134220 AGCACACAAAAAGAGACGGGA 60.134 47.619 0.00 0.00 0.00 5.14
120 121 1.002468 CAGCACACAAAAAGAGACGGG 60.002 52.381 0.00 0.00 0.00 5.28
121 122 1.002468 CCAGCACACAAAAAGAGACGG 60.002 52.381 0.00 0.00 0.00 4.79
122 123 1.597937 GCCAGCACACAAAAAGAGACG 60.598 52.381 0.00 0.00 0.00 4.18
123 124 1.405105 TGCCAGCACACAAAAAGAGAC 59.595 47.619 0.00 0.00 0.00 3.36
124 125 1.761449 TGCCAGCACACAAAAAGAGA 58.239 45.000 0.00 0.00 0.00 3.10
125 126 2.223876 ACATGCCAGCACACAAAAAGAG 60.224 45.455 0.00 0.00 0.00 2.85
126 127 1.755959 ACATGCCAGCACACAAAAAGA 59.244 42.857 0.00 0.00 0.00 2.52
127 128 1.862201 CACATGCCAGCACACAAAAAG 59.138 47.619 0.00 0.00 0.00 2.27
128 129 1.206610 ACACATGCCAGCACACAAAAA 59.793 42.857 0.00 0.00 0.00 1.94
129 130 0.822811 ACACATGCCAGCACACAAAA 59.177 45.000 0.00 0.00 0.00 2.44
130 131 0.102663 CACACATGCCAGCACACAAA 59.897 50.000 0.00 0.00 0.00 2.83
131 132 1.734748 CACACATGCCAGCACACAA 59.265 52.632 0.00 0.00 0.00 3.33
132 133 2.847754 GCACACATGCCAGCACACA 61.848 57.895 0.00 0.00 46.97 3.72
133 134 2.049802 GCACACATGCCAGCACAC 60.050 61.111 0.00 0.00 46.97 3.82
142 143 2.078849 TAGTTCAGTCGGCACACATG 57.921 50.000 0.00 0.00 0.00 3.21
143 144 2.621338 CATAGTTCAGTCGGCACACAT 58.379 47.619 0.00 0.00 0.00 3.21
144 145 1.939381 GCATAGTTCAGTCGGCACACA 60.939 52.381 0.00 0.00 0.00 3.72
145 146 0.721718 GCATAGTTCAGTCGGCACAC 59.278 55.000 0.00 0.00 0.00 3.82
146 147 0.735978 CGCATAGTTCAGTCGGCACA 60.736 55.000 0.00 0.00 0.00 4.57
147 148 1.421410 CCGCATAGTTCAGTCGGCAC 61.421 60.000 0.00 0.00 33.36 5.01
148 149 1.153647 CCGCATAGTTCAGTCGGCA 60.154 57.895 0.00 0.00 33.36 5.69
149 150 1.153628 ACCGCATAGTTCAGTCGGC 60.154 57.895 0.00 0.00 43.50 5.54
150 151 0.108804 ACACCGCATAGTTCAGTCGG 60.109 55.000 0.00 0.00 45.04 4.79
151 152 1.710013 AACACCGCATAGTTCAGTCG 58.290 50.000 0.00 0.00 0.00 4.18
152 153 4.213482 AGAAAAACACCGCATAGTTCAGTC 59.787 41.667 0.00 0.00 0.00 3.51
153 154 4.024048 CAGAAAAACACCGCATAGTTCAGT 60.024 41.667 0.00 0.00 0.00 3.41
154 155 4.213270 TCAGAAAAACACCGCATAGTTCAG 59.787 41.667 0.00 0.00 0.00 3.02
155 156 4.130857 TCAGAAAAACACCGCATAGTTCA 58.869 39.130 0.00 0.00 0.00 3.18
156 157 4.742438 TCAGAAAAACACCGCATAGTTC 57.258 40.909 0.00 0.00 0.00 3.01
157 158 4.556699 GCTTCAGAAAAACACCGCATAGTT 60.557 41.667 0.00 0.00 0.00 2.24
158 159 3.058224 GCTTCAGAAAAACACCGCATAGT 60.058 43.478 0.00 0.00 0.00 2.12
159 160 3.189287 AGCTTCAGAAAAACACCGCATAG 59.811 43.478 0.00 0.00 0.00 2.23
160 161 3.058293 CAGCTTCAGAAAAACACCGCATA 60.058 43.478 0.00 0.00 0.00 3.14
161 162 1.956477 AGCTTCAGAAAAACACCGCAT 59.044 42.857 0.00 0.00 0.00 4.73
162 163 1.065401 CAGCTTCAGAAAAACACCGCA 59.935 47.619 0.00 0.00 0.00 5.69
163 164 1.600413 CCAGCTTCAGAAAAACACCGC 60.600 52.381 0.00 0.00 0.00 5.68
164 165 1.600413 GCCAGCTTCAGAAAAACACCG 60.600 52.381 0.00 0.00 0.00 4.94
165 166 1.408702 TGCCAGCTTCAGAAAAACACC 59.591 47.619 0.00 0.00 0.00 4.16
166 167 2.869233 TGCCAGCTTCAGAAAAACAC 57.131 45.000 0.00 0.00 0.00 3.32
167 168 3.132646 ACAATGCCAGCTTCAGAAAAACA 59.867 39.130 0.00 0.00 0.00 2.83
168 169 3.721035 ACAATGCCAGCTTCAGAAAAAC 58.279 40.909 0.00 0.00 0.00 2.43
169 170 5.010922 ACATACAATGCCAGCTTCAGAAAAA 59.989 36.000 0.00 0.00 0.00 1.94
170 171 4.523943 ACATACAATGCCAGCTTCAGAAAA 59.476 37.500 0.00 0.00 0.00 2.29
171 172 4.081406 ACATACAATGCCAGCTTCAGAAA 58.919 39.130 0.00 0.00 0.00 2.52
172 173 3.689347 ACATACAATGCCAGCTTCAGAA 58.311 40.909 0.00 0.00 0.00 3.02
173 174 3.273434 GACATACAATGCCAGCTTCAGA 58.727 45.455 0.00 0.00 0.00 3.27
174 175 2.031314 CGACATACAATGCCAGCTTCAG 59.969 50.000 0.00 0.00 0.00 3.02
175 176 2.009051 CGACATACAATGCCAGCTTCA 58.991 47.619 0.00 0.00 0.00 3.02
176 177 1.331756 CCGACATACAATGCCAGCTTC 59.668 52.381 0.00 0.00 0.00 3.86
177 178 1.382522 CCGACATACAATGCCAGCTT 58.617 50.000 0.00 0.00 0.00 3.74
178 179 1.097547 GCCGACATACAATGCCAGCT 61.098 55.000 0.00 0.00 0.00 4.24
179 180 1.356624 GCCGACATACAATGCCAGC 59.643 57.895 0.00 0.00 0.00 4.85
180 181 1.643292 CGCCGACATACAATGCCAG 59.357 57.895 0.00 0.00 0.00 4.85
181 182 2.468670 GCGCCGACATACAATGCCA 61.469 57.895 0.00 0.00 0.00 4.92
182 183 2.180204 AGCGCCGACATACAATGCC 61.180 57.895 2.29 0.00 0.00 4.40
183 184 1.010797 CAGCGCCGACATACAATGC 60.011 57.895 2.29 0.00 0.00 3.56
184 185 1.643292 CCAGCGCCGACATACAATG 59.357 57.895 2.29 0.00 0.00 2.82
185 186 2.180204 GCCAGCGCCGACATACAAT 61.180 57.895 2.29 0.00 0.00 2.71
186 187 2.817834 GCCAGCGCCGACATACAA 60.818 61.111 2.29 0.00 0.00 2.41
187 188 2.867793 AATGCCAGCGCCGACATACA 62.868 55.000 2.29 0.00 0.00 2.29
188 189 0.878523 TAATGCCAGCGCCGACATAC 60.879 55.000 2.29 0.00 0.00 2.39
189 190 0.034756 ATAATGCCAGCGCCGACATA 59.965 50.000 2.29 0.00 0.00 2.29
190 191 1.227943 ATAATGCCAGCGCCGACAT 60.228 52.632 2.29 1.59 0.00 3.06
191 192 2.179547 CATAATGCCAGCGCCGACA 61.180 57.895 2.29 0.00 0.00 4.35
192 193 2.633657 CATAATGCCAGCGCCGAC 59.366 61.111 2.29 0.00 0.00 4.79
193 194 3.279116 GCATAATGCCAGCGCCGA 61.279 61.111 2.29 0.00 37.42 5.54
194 195 3.282157 AGCATAATGCCAGCGCCG 61.282 61.111 2.29 0.00 46.52 6.46
195 196 2.333938 CAGCATAATGCCAGCGCC 59.666 61.111 2.29 0.00 46.52 6.53
196 197 2.333938 CCAGCATAATGCCAGCGC 59.666 61.111 0.00 0.00 46.52 5.92
197 198 1.802337 ATGCCAGCATAATGCCAGCG 61.802 55.000 2.61 0.00 46.52 5.18
198 199 0.319555 CATGCCAGCATAATGCCAGC 60.320 55.000 4.52 0.00 46.52 4.85
199 200 1.324383 TCATGCCAGCATAATGCCAG 58.676 50.000 4.52 0.00 46.52 4.85
200 201 1.409790 GTTCATGCCAGCATAATGCCA 59.590 47.619 4.52 0.00 46.52 4.92
201 202 1.684983 AGTTCATGCCAGCATAATGCC 59.315 47.619 4.52 0.00 46.52 4.40
202 203 4.482386 CATAGTTCATGCCAGCATAATGC 58.518 43.478 4.52 0.00 45.46 3.56
203 204 4.082408 CCCATAGTTCATGCCAGCATAATG 60.082 45.833 4.52 4.87 34.91 1.90
204 205 4.084287 CCCATAGTTCATGCCAGCATAAT 58.916 43.478 4.52 0.00 34.91 1.28
205 206 3.117550 ACCCATAGTTCATGCCAGCATAA 60.118 43.478 4.52 0.00 34.91 1.90
206 207 2.442878 ACCCATAGTTCATGCCAGCATA 59.557 45.455 4.52 0.00 34.91 3.14
207 208 1.216175 ACCCATAGTTCATGCCAGCAT 59.784 47.619 0.00 0.00 37.08 3.79
208 209 0.625316 ACCCATAGTTCATGCCAGCA 59.375 50.000 0.00 0.00 32.84 4.41
209 210 1.027357 CACCCATAGTTCATGCCAGC 58.973 55.000 0.00 0.00 32.84 4.85
210 211 2.292267 GTCACCCATAGTTCATGCCAG 58.708 52.381 0.00 0.00 32.84 4.85
211 212 1.406751 CGTCACCCATAGTTCATGCCA 60.407 52.381 0.00 0.00 32.84 4.92
212 213 1.134521 TCGTCACCCATAGTTCATGCC 60.135 52.381 0.00 0.00 32.84 4.40
213 214 1.933853 GTCGTCACCCATAGTTCATGC 59.066 52.381 0.00 0.00 32.84 4.06
214 215 3.245518 TGTCGTCACCCATAGTTCATG 57.754 47.619 0.00 0.00 0.00 3.07
215 216 3.450817 TCATGTCGTCACCCATAGTTCAT 59.549 43.478 0.00 0.00 0.00 2.57
216 217 2.829120 TCATGTCGTCACCCATAGTTCA 59.171 45.455 0.00 0.00 0.00 3.18
217 218 3.187700 GTCATGTCGTCACCCATAGTTC 58.812 50.000 0.00 0.00 0.00 3.01
218 219 2.093658 GGTCATGTCGTCACCCATAGTT 60.094 50.000 0.00 0.00 0.00 2.24
219 220 1.480954 GGTCATGTCGTCACCCATAGT 59.519 52.381 0.00 0.00 0.00 2.12
220 221 1.536072 CGGTCATGTCGTCACCCATAG 60.536 57.143 0.00 0.00 0.00 2.23
221 222 0.458260 CGGTCATGTCGTCACCCATA 59.542 55.000 0.00 0.00 0.00 2.74
222 223 1.218047 CGGTCATGTCGTCACCCAT 59.782 57.895 0.00 0.00 0.00 4.00
223 224 2.654289 CGGTCATGTCGTCACCCA 59.346 61.111 0.00 0.00 0.00 4.51
224 225 2.813908 GCGGTCATGTCGTCACCC 60.814 66.667 11.42 0.00 0.00 4.61
225 226 2.094659 CAGCGGTCATGTCGTCACC 61.095 63.158 11.42 2.43 0.00 4.02
226 227 2.094659 CCAGCGGTCATGTCGTCAC 61.095 63.158 11.42 0.00 0.00 3.67
227 228 2.261361 CCAGCGGTCATGTCGTCA 59.739 61.111 11.42 0.00 0.00 4.35
228 229 3.188786 GCCAGCGGTCATGTCGTC 61.189 66.667 11.42 5.70 0.00 4.20
229 230 3.315142 ATGCCAGCGGTCATGTCGT 62.315 57.895 11.42 0.00 0.00 4.34
230 231 2.512286 ATGCCAGCGGTCATGTCG 60.512 61.111 6.80 6.80 0.00 4.35
231 232 0.816825 ATCATGCCAGCGGTCATGTC 60.817 55.000 13.86 0.00 37.94 3.06
232 233 0.816825 GATCATGCCAGCGGTCATGT 60.817 55.000 13.86 4.40 37.94 3.21
233 234 0.534427 AGATCATGCCAGCGGTCATG 60.534 55.000 9.38 9.38 38.01 3.07
234 235 1.051008 TAGATCATGCCAGCGGTCAT 58.949 50.000 0.00 0.00 0.00 3.06
235 236 1.051008 ATAGATCATGCCAGCGGTCA 58.949 50.000 0.00 0.00 0.00 4.02
236 237 1.436600 CATAGATCATGCCAGCGGTC 58.563 55.000 0.00 0.00 0.00 4.79
237 238 0.035881 CCATAGATCATGCCAGCGGT 59.964 55.000 0.00 0.00 32.84 5.68
238 239 1.303799 GCCATAGATCATGCCAGCGG 61.304 60.000 0.00 0.00 32.84 5.52
239 240 0.321387 AGCCATAGATCATGCCAGCG 60.321 55.000 0.00 0.00 32.84 5.18
240 241 1.166129 CAGCCATAGATCATGCCAGC 58.834 55.000 0.00 0.00 32.84 4.85
241 242 1.166129 GCAGCCATAGATCATGCCAG 58.834 55.000 0.00 0.00 32.84 4.85
242 243 0.604511 CGCAGCCATAGATCATGCCA 60.605 55.000 0.00 0.00 33.32 4.92
243 244 1.303799 CCGCAGCCATAGATCATGCC 61.304 60.000 0.00 0.00 33.32 4.40
244 245 0.321034 TCCGCAGCCATAGATCATGC 60.321 55.000 0.00 0.00 32.84 4.06
245 246 2.277969 GATCCGCAGCCATAGATCATG 58.722 52.381 0.00 0.00 36.09 3.07
246 247 1.209019 GGATCCGCAGCCATAGATCAT 59.791 52.381 0.00 0.00 37.46 2.45
247 248 0.610174 GGATCCGCAGCCATAGATCA 59.390 55.000 0.00 0.00 37.46 2.92
248 249 0.901124 AGGATCCGCAGCCATAGATC 59.099 55.000 5.98 0.00 35.45 2.75
249 250 1.356124 AAGGATCCGCAGCCATAGAT 58.644 50.000 5.98 0.00 0.00 1.98
250 251 1.131638 AAAGGATCCGCAGCCATAGA 58.868 50.000 5.98 0.00 0.00 1.98
251 252 1.876156 GAAAAGGATCCGCAGCCATAG 59.124 52.381 5.98 0.00 0.00 2.23
252 253 1.211703 TGAAAAGGATCCGCAGCCATA 59.788 47.619 5.98 0.00 0.00 2.74
253 254 0.034186 TGAAAAGGATCCGCAGCCAT 60.034 50.000 5.98 0.00 0.00 4.40
254 255 0.251121 TTGAAAAGGATCCGCAGCCA 60.251 50.000 5.98 0.00 0.00 4.75
255 256 1.106285 ATTGAAAAGGATCCGCAGCC 58.894 50.000 5.98 0.00 0.00 4.85
256 257 4.574599 AATATTGAAAAGGATCCGCAGC 57.425 40.909 5.98 0.00 0.00 5.25
257 258 6.136071 CGTAAATATTGAAAAGGATCCGCAG 58.864 40.000 5.98 0.00 0.00 5.18
258 259 5.587043 ACGTAAATATTGAAAAGGATCCGCA 59.413 36.000 5.98 0.67 0.00 5.69
259 260 5.907391 CACGTAAATATTGAAAAGGATCCGC 59.093 40.000 5.98 0.00 0.00 5.54
260 261 5.907391 GCACGTAAATATTGAAAAGGATCCG 59.093 40.000 5.98 0.00 0.00 4.18
261 262 5.907391 CGCACGTAAATATTGAAAAGGATCC 59.093 40.000 2.48 2.48 0.00 3.36
262 263 5.907391 CCGCACGTAAATATTGAAAAGGATC 59.093 40.000 0.00 0.00 0.00 3.36
263 264 5.587043 TCCGCACGTAAATATTGAAAAGGAT 59.413 36.000 0.00 0.00 0.00 3.24
264 265 4.936411 TCCGCACGTAAATATTGAAAAGGA 59.064 37.500 0.00 0.00 0.00 3.36
265 266 5.025826 GTCCGCACGTAAATATTGAAAAGG 58.974 41.667 0.00 0.00 0.00 3.11
266 267 5.623335 TGTCCGCACGTAAATATTGAAAAG 58.377 37.500 0.00 0.00 0.00 2.27
267 268 5.608676 TGTCCGCACGTAAATATTGAAAA 57.391 34.783 0.00 0.00 0.00 2.29
268 269 5.351740 TCATGTCCGCACGTAAATATTGAAA 59.648 36.000 0.00 0.00 0.00 2.69
269 270 4.870991 TCATGTCCGCACGTAAATATTGAA 59.129 37.500 0.00 0.00 0.00 2.69
270 271 4.434520 TCATGTCCGCACGTAAATATTGA 58.565 39.130 0.00 0.00 0.00 2.57
271 272 4.787381 TCATGTCCGCACGTAAATATTG 57.213 40.909 0.00 0.00 0.00 1.90
272 273 5.804692 TTTCATGTCCGCACGTAAATATT 57.195 34.783 0.00 0.00 0.00 1.28
273 274 5.277779 CCATTTCATGTCCGCACGTAAATAT 60.278 40.000 0.00 0.00 0.00 1.28
274 275 4.034626 CCATTTCATGTCCGCACGTAAATA 59.965 41.667 0.00 0.00 0.00 1.40
275 276 3.181501 CCATTTCATGTCCGCACGTAAAT 60.182 43.478 0.00 0.00 0.00 1.40
276 277 2.160615 CCATTTCATGTCCGCACGTAAA 59.839 45.455 0.00 0.00 0.00 2.01
277 278 1.735018 CCATTTCATGTCCGCACGTAA 59.265 47.619 0.00 0.00 0.00 3.18
278 279 1.364721 CCATTTCATGTCCGCACGTA 58.635 50.000 0.00 0.00 0.00 3.57
279 280 1.305219 CCCATTTCATGTCCGCACGT 61.305 55.000 0.00 0.00 0.00 4.49
280 281 1.305219 ACCCATTTCATGTCCGCACG 61.305 55.000 0.00 0.00 0.00 5.34
281 282 0.451783 GACCCATTTCATGTCCGCAC 59.548 55.000 0.00 0.00 0.00 5.34
282 283 1.024046 CGACCCATTTCATGTCCGCA 61.024 55.000 0.00 0.00 0.00 5.69
283 284 1.721487 CGACCCATTTCATGTCCGC 59.279 57.895 0.00 0.00 0.00 5.54
284 285 1.721487 GCGACCCATTTCATGTCCG 59.279 57.895 0.00 0.00 0.00 4.79
285 286 1.714899 CCGCGACCCATTTCATGTCC 61.715 60.000 8.23 0.00 0.00 4.02
286 287 1.721487 CCGCGACCCATTTCATGTC 59.279 57.895 8.23 0.00 0.00 3.06
287 288 2.406616 GCCGCGACCCATTTCATGT 61.407 57.895 8.23 0.00 0.00 3.21
288 289 2.408835 GCCGCGACCCATTTCATG 59.591 61.111 8.23 0.00 0.00 3.07
289 290 2.828549 GGCCGCGACCCATTTCAT 60.829 61.111 8.23 0.00 0.00 2.57
312 313 0.028902 GATTTGGGTCGGCAATACGC 59.971 55.000 0.00 0.00 41.28 4.42
313 314 1.663695 AGATTTGGGTCGGCAATACG 58.336 50.000 0.00 0.00 0.00 3.06
314 315 5.355910 TCTTTAAGATTTGGGTCGGCAATAC 59.644 40.000 0.00 0.00 0.00 1.89
315 316 5.502079 TCTTTAAGATTTGGGTCGGCAATA 58.498 37.500 0.00 0.00 0.00 1.90
316 317 4.340617 TCTTTAAGATTTGGGTCGGCAAT 58.659 39.130 0.00 0.00 0.00 3.56
317 318 3.756434 CTCTTTAAGATTTGGGTCGGCAA 59.244 43.478 0.00 0.00 0.00 4.52
318 319 3.343617 CTCTTTAAGATTTGGGTCGGCA 58.656 45.455 0.00 0.00 0.00 5.69
319 320 2.683362 CCTCTTTAAGATTTGGGTCGGC 59.317 50.000 0.00 0.00 0.00 5.54
320 321 3.279434 CCCTCTTTAAGATTTGGGTCGG 58.721 50.000 9.00 0.00 0.00 4.79
321 322 2.683362 GCCCTCTTTAAGATTTGGGTCG 59.317 50.000 16.09 0.00 31.68 4.79
322 323 2.683362 CGCCCTCTTTAAGATTTGGGTC 59.317 50.000 16.09 9.52 31.68 4.46
323 324 2.620627 CCGCCCTCTTTAAGATTTGGGT 60.621 50.000 16.09 0.00 31.68 4.51
324 325 2.024414 CCGCCCTCTTTAAGATTTGGG 58.976 52.381 11.99 11.99 32.08 4.12
325 326 2.683362 GTCCGCCCTCTTTAAGATTTGG 59.317 50.000 0.00 0.00 0.00 3.28
326 327 2.351726 CGTCCGCCCTCTTTAAGATTTG 59.648 50.000 0.00 0.00 0.00 2.32
327 328 2.629051 CGTCCGCCCTCTTTAAGATTT 58.371 47.619 0.00 0.00 0.00 2.17
328 329 1.742750 GCGTCCGCCCTCTTTAAGATT 60.743 52.381 0.00 0.00 34.56 2.40
329 330 0.179081 GCGTCCGCCCTCTTTAAGAT 60.179 55.000 0.00 0.00 34.56 2.40
330 331 1.217244 GCGTCCGCCCTCTTTAAGA 59.783 57.895 0.00 0.00 34.56 2.10
331 332 3.795638 GCGTCCGCCCTCTTTAAG 58.204 61.111 0.00 0.00 34.56 1.85
357 358 3.047877 GTCTGTTTGGGTCGGCCG 61.048 66.667 22.12 22.12 34.97 6.13
358 359 1.966451 CTGTCTGTTTGGGTCGGCC 60.966 63.158 0.00 0.00 0.00 6.13
359 360 0.534203 TTCTGTCTGTTTGGGTCGGC 60.534 55.000 0.00 0.00 0.00 5.54
360 361 1.961793 TTTCTGTCTGTTTGGGTCGG 58.038 50.000 0.00 0.00 0.00 4.79
361 362 2.286184 CGTTTTCTGTCTGTTTGGGTCG 60.286 50.000 0.00 0.00 0.00 4.79
362 363 2.032924 CCGTTTTCTGTCTGTTTGGGTC 59.967 50.000 0.00 0.00 0.00 4.46
363 364 2.021457 CCGTTTTCTGTCTGTTTGGGT 58.979 47.619 0.00 0.00 0.00 4.51
364 365 2.032924 GTCCGTTTTCTGTCTGTTTGGG 59.967 50.000 0.00 0.00 0.00 4.12
365 366 2.680841 TGTCCGTTTTCTGTCTGTTTGG 59.319 45.455 0.00 0.00 0.00 3.28
366 367 4.349663 TTGTCCGTTTTCTGTCTGTTTG 57.650 40.909 0.00 0.00 0.00 2.93
367 368 5.379732 TTTTGTCCGTTTTCTGTCTGTTT 57.620 34.783 0.00 0.00 0.00 2.83
368 369 5.158494 GTTTTTGTCCGTTTTCTGTCTGTT 58.842 37.500 0.00 0.00 0.00 3.16
369 370 4.670735 CGTTTTTGTCCGTTTTCTGTCTGT 60.671 41.667 0.00 0.00 0.00 3.41
370 371 3.783943 CGTTTTTGTCCGTTTTCTGTCTG 59.216 43.478 0.00 0.00 0.00 3.51
371 372 3.729762 GCGTTTTTGTCCGTTTTCTGTCT 60.730 43.478 0.00 0.00 0.00 3.41
372 373 2.528688 GCGTTTTTGTCCGTTTTCTGTC 59.471 45.455 0.00 0.00 0.00 3.51
373 374 2.521996 GCGTTTTTGTCCGTTTTCTGT 58.478 42.857 0.00 0.00 0.00 3.41
374 375 1.849829 GGCGTTTTTGTCCGTTTTCTG 59.150 47.619 0.00 0.00 0.00 3.02
375 376 1.532298 CGGCGTTTTTGTCCGTTTTCT 60.532 47.619 0.00 0.00 38.47 2.52
376 377 0.841356 CGGCGTTTTTGTCCGTTTTC 59.159 50.000 0.00 0.00 38.47 2.29
377 378 2.946703 CGGCGTTTTTGTCCGTTTT 58.053 47.368 0.00 0.00 38.47 2.43
378 379 4.694102 CGGCGTTTTTGTCCGTTT 57.306 50.000 0.00 0.00 38.47 3.60
383 384 0.382873 AAAGGGACGGCGTTTTTGTC 59.617 50.000 16.19 0.00 0.00 3.18
384 385 0.101579 CAAAGGGACGGCGTTTTTGT 59.898 50.000 24.54 8.44 0.00 2.83
385 386 0.596341 CCAAAGGGACGGCGTTTTTG 60.596 55.000 25.28 25.28 35.59 2.44
386 387 0.752376 TCCAAAGGGACGGCGTTTTT 60.752 50.000 16.19 12.77 38.64 1.94
387 388 1.152922 TCCAAAGGGACGGCGTTTT 60.153 52.632 16.19 8.33 38.64 2.43
388 389 2.511900 TCCAAAGGGACGGCGTTT 59.488 55.556 16.19 0.70 38.64 3.60
399 400 4.228097 CAGCGCGCCGATCCAAAG 62.228 66.667 30.33 2.51 0.00 2.77
409 410 3.989698 TAGAGCAACTCCAGCGCGC 62.990 63.158 26.66 26.66 36.87 6.86
410 411 1.446099 TTAGAGCAACTCCAGCGCG 60.446 57.895 0.00 0.00 36.87 6.86
411 412 1.687494 CGTTAGAGCAACTCCAGCGC 61.687 60.000 0.00 0.00 34.77 5.92
412 413 0.109272 TCGTTAGAGCAACTCCAGCG 60.109 55.000 0.00 0.00 34.77 5.18
413 414 1.929836 CATCGTTAGAGCAACTCCAGC 59.070 52.381 0.00 0.00 34.77 4.85
414 415 3.510388 TCATCGTTAGAGCAACTCCAG 57.490 47.619 0.00 0.00 34.77 3.86
415 416 3.953712 TTCATCGTTAGAGCAACTCCA 57.046 42.857 0.00 0.00 34.77 3.86
416 417 3.619038 CCTTTCATCGTTAGAGCAACTCC 59.381 47.826 0.00 0.00 34.77 3.85
417 418 4.495422 TCCTTTCATCGTTAGAGCAACTC 58.505 43.478 0.00 0.00 34.77 3.01
418 419 4.021016 ACTCCTTTCATCGTTAGAGCAACT 60.021 41.667 0.00 0.00 34.77 3.16
419 420 4.246458 ACTCCTTTCATCGTTAGAGCAAC 58.754 43.478 0.00 0.00 0.00 4.17
420 421 4.537135 ACTCCTTTCATCGTTAGAGCAA 57.463 40.909 0.00 0.00 0.00 3.91
421 422 4.705507 AGTACTCCTTTCATCGTTAGAGCA 59.294 41.667 0.00 0.00 0.00 4.26
422 423 5.251601 AGTACTCCTTTCATCGTTAGAGC 57.748 43.478 0.00 0.00 0.00 4.09
423 424 8.535690 AAAAAGTACTCCTTTCATCGTTAGAG 57.464 34.615 0.00 0.00 42.62 2.43
448 449 8.815141 TGTAGTGCAGTAGAACGTTAATTAAA 57.185 30.769 0.00 0.00 0.00 1.52
451 452 6.946229 CTGTAGTGCAGTAGAACGTTAATT 57.054 37.500 0.00 0.00 40.27 1.40
487 491 4.845580 CAGCTGCTGCCCCGTAGG 62.846 72.222 17.73 0.00 42.57 3.18
488 492 3.774528 TCAGCTGCTGCCCCGTAG 61.775 66.667 24.38 0.00 40.80 3.51
489 493 4.082523 GTCAGCTGCTGCCCCGTA 62.083 66.667 24.38 3.44 40.80 4.02
491 495 3.315142 TTAGTCAGCTGCTGCCCCG 62.315 63.158 24.38 0.78 40.80 5.73
497 501 6.958596 TCAGTGTTACTGTTAGTCAGCTGCT 61.959 44.000 9.47 12.20 46.03 4.24
505 509 5.589192 GTGTCTGTCAGTGTTACTGTTAGT 58.411 41.667 8.64 0.00 46.03 2.24
507 511 4.498513 CCGTGTCTGTCAGTGTTACTGTTA 60.499 45.833 8.64 0.00 46.03 2.41
572 578 1.004918 ACGGAGTAGCAACAGTGGC 60.005 57.895 0.00 0.00 41.94 5.01
589 595 2.039327 TTTATGCCACGTTTTGCGAC 57.961 45.000 0.00 0.00 44.77 5.19
590 596 2.776312 TTTTATGCCACGTTTTGCGA 57.224 40.000 0.00 0.00 44.77 5.10
625 632 2.668212 GGGTAACGCTGCACTGCA 60.668 61.111 3.11 3.11 35.04 4.41
629 636 2.622962 GGGTTGGGTAACGCTGCAC 61.623 63.158 0.00 0.00 43.94 4.57
639 646 0.471022 GGACATGGTTTGGGTTGGGT 60.471 55.000 0.00 0.00 0.00 4.51
640 647 0.178935 AGGACATGGTTTGGGTTGGG 60.179 55.000 0.00 0.00 0.00 4.12
641 648 1.344114 CAAGGACATGGTTTGGGTTGG 59.656 52.381 0.00 0.00 0.00 3.77
642 649 1.270252 GCAAGGACATGGTTTGGGTTG 60.270 52.381 0.00 0.00 0.00 3.77
652 2117 2.608752 GGCTTTGTTGAGCAAGGACATG 60.609 50.000 0.00 0.00 41.37 3.21
670 2135 3.066203 AGTTTCGATCAAAACGTTTGGCT 59.934 39.130 15.46 2.17 42.63 4.75
686 2151 1.197036 GGCTTTTCCTTCGGAGTTTCG 59.803 52.381 0.00 0.00 31.21 3.46
687 2152 1.540267 GGGCTTTTCCTTCGGAGTTTC 59.460 52.381 0.00 0.00 31.21 2.78
688 2153 1.133606 TGGGCTTTTCCTTCGGAGTTT 60.134 47.619 0.00 0.00 31.21 2.66
689 2154 0.476771 TGGGCTTTTCCTTCGGAGTT 59.523 50.000 0.00 0.00 31.21 3.01
690 2155 0.698818 ATGGGCTTTTCCTTCGGAGT 59.301 50.000 0.00 0.00 31.21 3.85
691 2156 1.383523 GATGGGCTTTTCCTTCGGAG 58.616 55.000 0.00 0.00 31.21 4.63
693 2158 1.037579 GGGATGGGCTTTTCCTTCGG 61.038 60.000 0.00 0.00 33.31 4.30
694 2159 0.323360 TGGGATGGGCTTTTCCTTCG 60.323 55.000 0.00 0.00 33.31 3.79
695 2160 1.758862 CATGGGATGGGCTTTTCCTTC 59.241 52.381 0.00 0.00 34.39 3.46
696 2161 1.623279 CCATGGGATGGGCTTTTCCTT 60.623 52.381 2.85 0.00 46.86 3.36
697 2162 0.031817 CCATGGGATGGGCTTTTCCT 60.032 55.000 2.85 0.00 46.86 3.36
698 2163 2.519937 CCATGGGATGGGCTTTTCC 58.480 57.895 2.85 0.00 46.86 3.13
707 2172 1.081892 GATCGAATCGCCATGGGATG 58.918 55.000 15.13 4.34 35.43 3.51
733 2205 3.853671 GTGGTGATATTTCGCAGCAAAAG 59.146 43.478 0.00 0.00 43.17 2.27
736 2208 1.742831 GGTGGTGATATTTCGCAGCAA 59.257 47.619 0.00 0.00 43.17 3.91
737 2209 1.378531 GGTGGTGATATTTCGCAGCA 58.621 50.000 0.00 0.00 39.87 4.41
738 2210 0.663153 GGGTGGTGATATTTCGCAGC 59.337 55.000 0.00 0.00 33.88 5.25
739 2211 2.036958 TGGGTGGTGATATTTCGCAG 57.963 50.000 0.00 0.00 33.88 5.18
740 2212 2.088423 GTTGGGTGGTGATATTTCGCA 58.912 47.619 0.00 0.00 33.88 5.10
741 2213 2.088423 TGTTGGGTGGTGATATTTCGC 58.912 47.619 0.00 0.00 0.00 4.70
751 2229 1.378762 CCGGAAGATGTTGGGTGGT 59.621 57.895 0.00 0.00 0.00 4.16
769 2247 1.681486 CGCCTCTTCTCTTCTCCCCC 61.681 65.000 0.00 0.00 0.00 5.40
771 2249 1.187087 TTCGCCTCTTCTCTTCTCCC 58.813 55.000 0.00 0.00 0.00 4.30
772 2250 2.542824 CGATTCGCCTCTTCTCTTCTCC 60.543 54.545 0.00 0.00 0.00 3.71
795 2273 3.496870 GGACCATATTGCCCTTCCTGTAG 60.497 52.174 0.00 0.00 0.00 2.74
801 2279 1.947456 GTTCGGACCATATTGCCCTTC 59.053 52.381 0.00 0.00 0.00 3.46
824 2303 1.002011 GAGAAAGGAAAGCCCGCCT 60.002 57.895 0.00 0.00 40.87 5.52
826 2305 2.399356 CGGAGAAAGGAAAGCCCGC 61.399 63.158 0.00 0.00 40.87 6.13
841 2320 1.346479 TGGTGTTTCTGGGTTCCGGA 61.346 55.000 0.00 0.00 37.09 5.14
883 2362 2.115605 AGGTTTAAGGAGGGGGAGAAGA 59.884 50.000 0.00 0.00 0.00 2.87
965 2444 2.202932 CGGATTGGTGGGAGCGAG 60.203 66.667 0.00 0.00 0.00 5.03
966 2445 4.467084 GCGGATTGGTGGGAGCGA 62.467 66.667 0.00 0.00 0.00 4.93
1187 2670 1.512926 CAACTGTTCTTCCGGTGGAG 58.487 55.000 0.00 0.00 31.21 3.86
1189 2672 0.107831 TCCAACTGTTCTTCCGGTGG 59.892 55.000 0.00 0.00 39.10 4.61
1196 2679 5.859205 AAAGAGCAAATCCAACTGTTCTT 57.141 34.783 0.00 0.00 42.67 2.52
1290 2773 6.806739 GGTCGAATTTTTCTTTCCGAATCAAT 59.193 34.615 0.00 0.00 0.00 2.57
1347 2830 2.622942 TGAACAACCAACCAGATTGAGC 59.377 45.455 0.00 0.00 41.23 4.26
1735 3230 0.179089 CCAGCGAGTCATCCTTCCTG 60.179 60.000 0.00 0.00 0.00 3.86
1833 3328 2.356278 GCTTGGCCCCTGTCATCA 59.644 61.111 0.00 0.00 0.00 3.07
1855 3350 3.735037 CTTCTTAGGCGGACCGGGC 62.735 68.421 17.22 0.21 42.76 6.13
1856 3351 2.499685 CTTCTTAGGCGGACCGGG 59.500 66.667 17.22 0.00 42.76 5.73
1857 3352 1.400530 ATCCTTCTTAGGCGGACCGG 61.401 60.000 17.22 0.00 41.69 5.28
1858 3353 0.249489 CATCCTTCTTAGGCGGACCG 60.249 60.000 10.29 10.29 41.69 4.79
1859 3354 0.106894 CCATCCTTCTTAGGCGGACC 59.893 60.000 0.00 0.00 41.69 4.46
1860 3355 0.533085 GCCATCCTTCTTAGGCGGAC 60.533 60.000 0.00 0.00 41.69 4.79
1861 3356 1.830145 GCCATCCTTCTTAGGCGGA 59.170 57.895 0.00 0.00 41.69 5.54
1862 3357 4.464262 GCCATCCTTCTTAGGCGG 57.536 61.111 0.00 0.00 41.69 6.13
1865 3360 0.250081 GGCGAGCCATCCTTCTTAGG 60.250 60.000 9.58 0.00 38.29 2.69
1866 3361 0.598680 CGGCGAGCCATCCTTCTTAG 60.599 60.000 15.03 0.00 35.37 2.18
1867 3362 1.441729 CGGCGAGCCATCCTTCTTA 59.558 57.895 15.03 0.00 35.37 2.10
1868 3363 2.187946 CGGCGAGCCATCCTTCTT 59.812 61.111 15.03 0.00 35.37 2.52
1869 3364 3.854669 CCGGCGAGCCATCCTTCT 61.855 66.667 9.30 0.00 35.37 2.85
2076 3571 1.153086 GCGGATGGAGCCTCATTGT 60.153 57.895 0.00 0.00 0.00 2.71
2233 3728 0.898320 ACTCTGGCGTACTGAATGCT 59.102 50.000 0.00 0.00 40.23 3.79
2414 3909 2.229543 TGTCTGCAATTGATGTTGAGGC 59.770 45.455 10.34 0.00 0.00 4.70
2518 4013 4.202151 GCCTCATTGGGTGTAATTTCATCC 60.202 45.833 7.40 7.40 38.93 3.51
2545 4040 1.503542 CGGCTTGACCAATGCTGAC 59.496 57.895 7.00 0.00 39.03 3.51
2584 4079 6.128172 CCTCGTCATAAAAGTTCAGCAGAAAT 60.128 38.462 0.00 0.00 35.08 2.17
2605 4100 4.690122 ACTTCGGATTATTTGGTACCTCG 58.310 43.478 14.36 4.63 0.00 4.63
2619 4114 2.413837 CGAGGACACAAAACTTCGGAT 58.586 47.619 0.00 0.00 33.29 4.18
2629 4124 1.073025 AGGCAATGCGAGGACACAA 59.927 52.632 0.00 0.00 0.00 3.33
2736 4231 2.553602 TGTGCACTGCATTTAGGAACTG 59.446 45.455 19.41 0.00 41.91 3.16
2763 4258 6.985188 TGATGGATAGAACACAAAAGCTAC 57.015 37.500 0.00 0.00 0.00 3.58
2805 4300 6.972328 GCTGAAGTTCAACAACAACATAAAGA 59.028 34.615 7.06 0.00 34.60 2.52
2806 4301 6.751425 TGCTGAAGTTCAACAACAACATAAAG 59.249 34.615 6.49 0.00 34.60 1.85
2810 4305 4.158394 ACTGCTGAAGTTCAACAACAACAT 59.842 37.500 10.06 0.00 34.57 2.71
2929 4424 0.035458 AGTCTCAAGCCAAACCCTCG 59.965 55.000 0.00 0.00 0.00 4.63
2939 4434 7.983307 AGATTCATACAAATTCAGTCTCAAGC 58.017 34.615 0.00 0.00 0.00 4.01
2971 4466 5.345202 GCATCTGTTTCTCTTTTTGCATGAG 59.655 40.000 0.00 0.00 0.00 2.90
2985 4480 4.874970 ACCAGAACAATTGCATCTGTTTC 58.125 39.130 27.15 14.47 39.10 2.78
3035 4639 8.777413 CAAGATTCATGTAACTGAGAGTTTCAA 58.223 33.333 0.00 0.00 38.62 2.69
3047 4651 8.887717 AGATTACTTCTGCAAGATTCATGTAAC 58.112 33.333 0.00 0.00 46.36 2.50
3158 4762 7.973944 AGAGTTGTTGAATGTTTACCAAAAGTC 59.026 33.333 0.00 0.00 0.00 3.01
3276 5252 8.925161 ATTGAAATAATTTTCGGTGTACATGG 57.075 30.769 0.00 0.00 43.49 3.66
3620 5596 1.818674 CCGGCAGTTTCCTTATGCTTT 59.181 47.619 0.00 0.00 39.88 3.51
3659 5635 1.826720 GCCTTTGCCATCTCATTCCAA 59.173 47.619 0.00 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.