Multiple sequence alignment - TraesCS2B01G408900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G408900 chr2B 100.000 6966 0 0 444 7409 581715228 581708263 0.000000e+00 12864
1 TraesCS2B01G408900 chr2B 100.000 174 0 0 1 174 581715671 581715498 9.270000e-84 322
2 TraesCS2B01G408900 chr2D 94.306 3565 133 23 3114 6635 493525120 493521583 0.000000e+00 5395
3 TraesCS2B01G408900 chr2D 96.092 1177 32 6 774 1943 493526485 493525316 0.000000e+00 1906
4 TraesCS2B01G408900 chr2D 92.297 727 51 4 6688 7409 493521496 493520770 0.000000e+00 1027
5 TraesCS2B01G408900 chr2D 88.167 693 58 12 1935 2622 243656326 243655653 0.000000e+00 804
6 TraesCS2B01G408900 chr2D 87.340 703 58 16 1937 2630 341699330 341700010 0.000000e+00 776
7 TraesCS2B01G408900 chr2D 95.930 172 7 0 1 172 452411982 452411811 5.660000e-71 279
8 TraesCS2B01G408900 chr2A 93.731 3573 140 30 3114 6634 640082821 640086361 0.000000e+00 5280
9 TraesCS2B01G408900 chr2A 95.516 1182 41 6 771 1944 640081449 640082626 0.000000e+00 1879
10 TraesCS2B01G408900 chr2A 90.559 1144 82 17 1952 3093 179283021 179281902 0.000000e+00 1491
11 TraesCS2B01G408900 chr2A 90.311 1156 86 18 1940 3093 578390481 578391612 0.000000e+00 1491
12 TraesCS2B01G408900 chr2A 90.385 1144 84 17 1952 3093 551450204 551449085 0.000000e+00 1480
13 TraesCS2B01G408900 chr2A 90.436 711 54 7 6704 7409 640086548 640087249 0.000000e+00 924
14 TraesCS2B01G408900 chr7A 90.472 1144 82 18 1952 3093 319591984 319590866 0.000000e+00 1483
15 TraesCS2B01G408900 chr5A 90.526 1140 82 17 1956 3093 524723934 524722819 0.000000e+00 1483
16 TraesCS2B01G408900 chr5A 90.199 1153 87 17 1943 3093 68817754 68818882 0.000000e+00 1480
17 TraesCS2B01G408900 chr5A 90.052 1156 88 16 1940 3093 111614587 111615717 0.000000e+00 1472
18 TraesCS2B01G408900 chr4A 90.385 1144 84 15 1952 3093 164877818 164876699 0.000000e+00 1480
19 TraesCS2B01G408900 chr4A 89.820 1169 85 21 1934 3093 495113215 495112072 0.000000e+00 1469
20 TraesCS2B01G408900 chr3A 88.146 987 88 19 1952 2933 375018250 375017288 0.000000e+00 1147
21 TraesCS2B01G408900 chr4D 87.817 985 88 19 1939 2919 313574195 313575151 0.000000e+00 1125
22 TraesCS2B01G408900 chr4D 90.598 234 17 1 1943 2171 220344967 220345200 9.340000e-79 305
23 TraesCS2B01G408900 chr4D 89.754 244 16 3 1935 2170 325108119 325107877 3.360000e-78 303
24 TraesCS2B01G408900 chr6A 88.085 470 37 11 1942 2411 153352640 153353090 2.350000e-149 540
25 TraesCS2B01G408900 chr5D 86.591 440 35 15 1932 2366 386861697 386862117 1.460000e-126 464
26 TraesCS2B01G408900 chr5B 85.169 445 46 12 1930 2372 464890230 464890656 8.830000e-119 438
27 TraesCS2B01G408900 chr7B 96.491 171 6 0 2 172 187709616 187709786 4.380000e-72 283
28 TraesCS2B01G408900 chr3B 95.930 172 7 0 1 172 584731065 584731236 5.660000e-71 279
29 TraesCS2B01G408900 chr6B 96.429 168 6 0 5 172 555188714 555188547 2.040000e-70 278
30 TraesCS2B01G408900 chr6B 95.349 172 8 0 1 172 648724568 648724397 2.630000e-69 274
31 TraesCS2B01G408900 chr6D 95.402 174 6 1 1 172 407553693 407553866 7.320000e-70 276
32 TraesCS2B01G408900 chr1B 95.402 174 6 1 1 172 312058317 312058490 7.320000e-70 276
33 TraesCS2B01G408900 chr1B 95.402 174 7 1 1 174 428696099 428695927 7.320000e-70 276
34 TraesCS2B01G408900 chr1B 84.762 210 32 0 3893 4102 411570178 411569969 2.090000e-50 211
35 TraesCS2B01G408900 chr4B 95.349 172 8 0 1 172 28325875 28326046 2.630000e-69 274
36 TraesCS2B01G408900 chr1A 85.714 210 30 0 3893 4102 381307195 381306986 9.680000e-54 222
37 TraesCS2B01G408900 chrUn 84.762 210 32 0 3893 4102 11032037 11031828 2.090000e-50 211


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G408900 chr2B 581708263 581715671 7408 True 6593.000000 12864 100.000000 1 7409 2 chr2B.!!$R1 7408
1 TraesCS2B01G408900 chr2D 493520770 493526485 5715 True 2776.000000 5395 94.231667 774 7409 3 chr2D.!!$R3 6635
2 TraesCS2B01G408900 chr2D 243655653 243656326 673 True 804.000000 804 88.167000 1935 2622 1 chr2D.!!$R1 687
3 TraesCS2B01G408900 chr2D 341699330 341700010 680 False 776.000000 776 87.340000 1937 2630 1 chr2D.!!$F1 693
4 TraesCS2B01G408900 chr2A 640081449 640087249 5800 False 2694.333333 5280 93.227667 771 7409 3 chr2A.!!$F2 6638
5 TraesCS2B01G408900 chr2A 179281902 179283021 1119 True 1491.000000 1491 90.559000 1952 3093 1 chr2A.!!$R1 1141
6 TraesCS2B01G408900 chr2A 578390481 578391612 1131 False 1491.000000 1491 90.311000 1940 3093 1 chr2A.!!$F1 1153
7 TraesCS2B01G408900 chr2A 551449085 551450204 1119 True 1480.000000 1480 90.385000 1952 3093 1 chr2A.!!$R2 1141
8 TraesCS2B01G408900 chr7A 319590866 319591984 1118 True 1483.000000 1483 90.472000 1952 3093 1 chr7A.!!$R1 1141
9 TraesCS2B01G408900 chr5A 524722819 524723934 1115 True 1483.000000 1483 90.526000 1956 3093 1 chr5A.!!$R1 1137
10 TraesCS2B01G408900 chr5A 68817754 68818882 1128 False 1480.000000 1480 90.199000 1943 3093 1 chr5A.!!$F1 1150
11 TraesCS2B01G408900 chr5A 111614587 111615717 1130 False 1472.000000 1472 90.052000 1940 3093 1 chr5A.!!$F2 1153
12 TraesCS2B01G408900 chr4A 164876699 164877818 1119 True 1480.000000 1480 90.385000 1952 3093 1 chr4A.!!$R1 1141
13 TraesCS2B01G408900 chr4A 495112072 495113215 1143 True 1469.000000 1469 89.820000 1934 3093 1 chr4A.!!$R2 1159
14 TraesCS2B01G408900 chr3A 375017288 375018250 962 True 1147.000000 1147 88.146000 1952 2933 1 chr3A.!!$R1 981
15 TraesCS2B01G408900 chr4D 313574195 313575151 956 False 1125.000000 1125 87.817000 1939 2919 1 chr4D.!!$F2 980

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
47 48 0.103208 GACTCCATCATCCGCGTTCT 59.897 55.000 4.92 0.00 0.00 3.01 F
502 503 0.182775 AATGCGAGGGGGTGGATAAC 59.817 55.000 0.00 0.00 0.00 1.89 F
1183 1188 0.104304 GCGAAAGGAAGCGGATAGGA 59.896 55.000 0.00 0.00 0.00 2.94 F
2172 2289 0.174617 TGACATTATCAGCACGCGGA 59.825 50.000 12.47 0.00 31.91 5.54 F
2938 3069 0.037326 TGGGAAGTCATCAGTGTCGC 60.037 55.000 0.00 0.00 0.00 5.19 F
3688 3831 0.251165 GAGTTTGGCCTTGGCCAGTA 60.251 55.000 29.22 20.04 41.27 2.74 F
3737 3880 2.884639 CCCAGTGGAACGAAAATCTGTT 59.115 45.455 11.95 0.00 45.86 3.16 F
4643 4789 0.038166 ATGACCTTGTTGGCGTCCAT 59.962 50.000 0.00 0.00 40.22 3.41 F
5490 5649 0.877071 AGCATGTGCCTTTGAACTCG 59.123 50.000 0.57 0.00 43.38 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1162 1167 0.179084 CTATCCGCTTCCTTTCGCCA 60.179 55.000 0.0 0.00 0.00 5.69 R
2121 2233 0.324943 CCGAACTTGACATGGGAGGT 59.675 55.000 0.0 0.00 0.00 3.85 R
2919 3050 0.037326 GCGACACTGATGACTTCCCA 60.037 55.000 0.0 0.00 0.00 4.37 R
3640 3774 1.228245 ACGGATGCAGTGCAGGTTT 60.228 52.632 24.2 6.27 43.65 3.27 R
4620 4766 0.108585 ACGCCAACAAGGTCATGACT 59.891 50.000 24.5 8.73 40.61 3.41 R
4643 4789 2.111999 CTCTTCTGGGGGTGCAACGA 62.112 60.000 0.0 0.00 38.12 3.85 R
5490 5649 3.072944 GGAGATCAGCATGTAGGCATTC 58.927 50.000 0.0 0.00 37.40 2.67 R
6084 6262 0.399454 ACACAGATGAGCAGCTTGGT 59.601 50.000 0.0 0.00 0.00 3.67 R
6645 6828 0.179032 TGCAGAAGCGTGGGAAAAGA 60.179 50.000 0.0 0.00 46.23 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.469190 GATTTGAATCGTCGCGAGTAC 57.531 47.619 10.24 0.00 39.91 2.73
28 29 1.253116 TTTGAATCGTCGCGAGTACG 58.747 50.000 10.24 11.37 39.91 3.67
35 36 4.213666 TCGCGAGTACGACTCCAT 57.786 55.556 3.71 0.00 42.12 3.41
36 37 2.012237 TCGCGAGTACGACTCCATC 58.988 57.895 3.71 0.62 42.12 3.51
37 38 0.741927 TCGCGAGTACGACTCCATCA 60.742 55.000 3.71 0.00 42.12 3.07
38 39 0.308068 CGCGAGTACGACTCCATCAT 59.692 55.000 0.00 0.00 42.12 2.45
39 40 1.660614 CGCGAGTACGACTCCATCATC 60.661 57.143 0.00 0.00 42.12 2.92
40 41 1.335142 GCGAGTACGACTCCATCATCC 60.335 57.143 8.73 0.00 42.12 3.51
41 42 1.069838 CGAGTACGACTCCATCATCCG 60.070 57.143 8.73 0.00 42.12 4.18
42 43 0.669077 AGTACGACTCCATCATCCGC 59.331 55.000 0.00 0.00 0.00 5.54
43 44 0.660595 GTACGACTCCATCATCCGCG 60.661 60.000 0.00 0.00 0.00 6.46
44 45 1.099295 TACGACTCCATCATCCGCGT 61.099 55.000 4.92 0.00 0.00 6.01
45 46 1.226974 CGACTCCATCATCCGCGTT 60.227 57.895 4.92 0.00 0.00 4.84
46 47 1.209275 CGACTCCATCATCCGCGTTC 61.209 60.000 4.92 0.00 0.00 3.95
47 48 0.103208 GACTCCATCATCCGCGTTCT 59.897 55.000 4.92 0.00 0.00 3.01
48 49 1.337071 GACTCCATCATCCGCGTTCTA 59.663 52.381 4.92 0.00 0.00 2.10
49 50 1.338337 ACTCCATCATCCGCGTTCTAG 59.662 52.381 4.92 0.00 0.00 2.43
50 51 1.338337 CTCCATCATCCGCGTTCTAGT 59.662 52.381 4.92 0.00 0.00 2.57
51 52 2.552743 CTCCATCATCCGCGTTCTAGTA 59.447 50.000 4.92 0.00 0.00 1.82
52 53 2.953648 TCCATCATCCGCGTTCTAGTAA 59.046 45.455 4.92 0.00 0.00 2.24
53 54 3.050619 CCATCATCCGCGTTCTAGTAAC 58.949 50.000 4.92 0.00 0.00 2.50
54 55 2.463553 TCATCCGCGTTCTAGTAACG 57.536 50.000 17.59 17.59 45.56 3.18
61 62 0.912528 CGTTCTAGTAACGCTTCCGC 59.087 55.000 12.33 0.00 36.82 5.54
62 63 1.467035 CGTTCTAGTAACGCTTCCGCT 60.467 52.381 12.33 0.00 36.82 5.52
63 64 2.603953 GTTCTAGTAACGCTTCCGCTT 58.396 47.619 0.00 0.00 38.22 4.68
64 65 3.728864 CGTTCTAGTAACGCTTCCGCTTA 60.729 47.826 12.33 0.00 36.82 3.09
65 66 3.687572 TCTAGTAACGCTTCCGCTTAG 57.312 47.619 0.00 0.00 38.22 2.18
66 67 2.117910 CTAGTAACGCTTCCGCTTAGC 58.882 52.381 0.00 0.00 38.22 3.09
82 83 5.335827 GCTTAGCGATCTTCAAAGGTATG 57.664 43.478 0.00 0.00 0.00 2.39
83 84 5.050490 GCTTAGCGATCTTCAAAGGTATGA 58.950 41.667 0.00 0.00 0.00 2.15
84 85 5.523916 GCTTAGCGATCTTCAAAGGTATGAA 59.476 40.000 0.00 0.00 37.70 2.57
92 93 3.500448 TCAAAGGTATGAAGGTGCACA 57.500 42.857 20.43 0.00 0.00 4.57
93 94 4.032960 TCAAAGGTATGAAGGTGCACAT 57.967 40.909 20.43 9.24 0.00 3.21
94 95 4.009675 TCAAAGGTATGAAGGTGCACATC 58.990 43.478 20.43 16.35 0.00 3.06
95 96 2.717639 AGGTATGAAGGTGCACATCC 57.282 50.000 20.43 8.70 0.00 3.51
96 97 2.200081 AGGTATGAAGGTGCACATCCT 58.800 47.619 20.43 11.10 36.81 3.24
97 98 2.171448 AGGTATGAAGGTGCACATCCTC 59.829 50.000 20.43 7.76 33.76 3.71
98 99 2.171448 GGTATGAAGGTGCACATCCTCT 59.829 50.000 20.43 2.57 33.76 3.69
99 100 2.706339 ATGAAGGTGCACATCCTCTC 57.294 50.000 20.43 6.57 33.76 3.20
100 101 1.649321 TGAAGGTGCACATCCTCTCT 58.351 50.000 20.43 0.92 33.76 3.10
101 102 1.552337 TGAAGGTGCACATCCTCTCTC 59.448 52.381 20.43 5.38 33.76 3.20
102 103 1.830477 GAAGGTGCACATCCTCTCTCT 59.170 52.381 20.43 0.00 33.76 3.10
103 104 1.484038 AGGTGCACATCCTCTCTCTC 58.516 55.000 20.43 0.00 0.00 3.20
104 105 1.006998 AGGTGCACATCCTCTCTCTCT 59.993 52.381 20.43 0.00 0.00 3.10
105 106 1.408702 GGTGCACATCCTCTCTCTCTC 59.591 57.143 20.43 0.00 0.00 3.20
106 107 2.378038 GTGCACATCCTCTCTCTCTCT 58.622 52.381 13.17 0.00 0.00 3.10
107 108 2.760092 GTGCACATCCTCTCTCTCTCTT 59.240 50.000 13.17 0.00 0.00 2.85
108 109 2.759535 TGCACATCCTCTCTCTCTCTTG 59.240 50.000 0.00 0.00 0.00 3.02
109 110 2.760092 GCACATCCTCTCTCTCTCTTGT 59.240 50.000 0.00 0.00 0.00 3.16
110 111 3.195396 GCACATCCTCTCTCTCTCTTGTT 59.805 47.826 0.00 0.00 0.00 2.83
111 112 4.746729 CACATCCTCTCTCTCTCTTGTTG 58.253 47.826 0.00 0.00 0.00 3.33
112 113 4.220382 CACATCCTCTCTCTCTCTTGTTGT 59.780 45.833 0.00 0.00 0.00 3.32
113 114 4.837860 ACATCCTCTCTCTCTCTTGTTGTT 59.162 41.667 0.00 0.00 0.00 2.83
114 115 6.013379 ACATCCTCTCTCTCTCTTGTTGTTA 58.987 40.000 0.00 0.00 0.00 2.41
115 116 6.152661 ACATCCTCTCTCTCTCTTGTTGTTAG 59.847 42.308 0.00 0.00 0.00 2.34
116 117 5.882040 TCCTCTCTCTCTCTTGTTGTTAGA 58.118 41.667 0.00 0.00 0.00 2.10
117 118 6.307776 TCCTCTCTCTCTCTTGTTGTTAGAA 58.692 40.000 0.00 0.00 0.00 2.10
118 119 6.951198 TCCTCTCTCTCTCTTGTTGTTAGAAT 59.049 38.462 0.00 0.00 0.00 2.40
119 120 7.122055 TCCTCTCTCTCTCTTGTTGTTAGAATC 59.878 40.741 0.00 0.00 0.00 2.52
120 121 7.122650 CCTCTCTCTCTCTTGTTGTTAGAATCT 59.877 40.741 0.00 0.00 0.00 2.40
121 122 8.050778 TCTCTCTCTCTTGTTGTTAGAATCTC 57.949 38.462 0.00 0.00 0.00 2.75
122 123 7.122055 TCTCTCTCTCTTGTTGTTAGAATCTCC 59.878 40.741 0.00 0.00 0.00 3.71
123 124 6.951198 TCTCTCTCTTGTTGTTAGAATCTCCT 59.049 38.462 0.00 0.00 0.00 3.69
124 125 8.110271 TCTCTCTCTTGTTGTTAGAATCTCCTA 58.890 37.037 0.00 0.00 0.00 2.94
125 126 8.287439 TCTCTCTTGTTGTTAGAATCTCCTAG 57.713 38.462 0.00 0.00 0.00 3.02
126 127 8.110271 TCTCTCTTGTTGTTAGAATCTCCTAGA 58.890 37.037 0.00 0.00 0.00 2.43
127 128 8.830915 TCTCTTGTTGTTAGAATCTCCTAGAT 57.169 34.615 0.00 0.00 36.28 1.98
128 129 9.261035 TCTCTTGTTGTTAGAATCTCCTAGATT 57.739 33.333 1.85 1.85 46.84 2.40
129 130 9.311916 CTCTTGTTGTTAGAATCTCCTAGATTG 57.688 37.037 6.88 0.00 44.41 2.67
130 131 9.035890 TCTTGTTGTTAGAATCTCCTAGATTGA 57.964 33.333 6.88 0.00 44.41 2.57
131 132 9.829507 CTTGTTGTTAGAATCTCCTAGATTGAT 57.170 33.333 6.88 0.00 44.41 2.57
132 133 9.823647 TTGTTGTTAGAATCTCCTAGATTGATC 57.176 33.333 6.88 0.00 44.41 2.92
133 134 9.206690 TGTTGTTAGAATCTCCTAGATTGATCT 57.793 33.333 6.88 0.00 44.41 2.75
136 137 8.646004 TGTTAGAATCTCCTAGATTGATCTTGG 58.354 37.037 13.24 13.24 44.41 3.61
137 138 8.646900 GTTAGAATCTCCTAGATTGATCTTGGT 58.353 37.037 17.17 2.80 44.41 3.67
138 139 7.065120 AGAATCTCCTAGATTGATCTTGGTG 57.935 40.000 17.17 15.36 44.41 4.17
139 140 6.843333 AGAATCTCCTAGATTGATCTTGGTGA 59.157 38.462 20.37 20.37 44.41 4.02
142 143 7.531857 TCTCCTAGATTGATCTTGGTGATAC 57.468 40.000 17.17 0.00 45.88 2.24
143 144 6.207614 TCTCCTAGATTGATCTTGGTGATACG 59.792 42.308 17.17 0.00 45.88 3.06
144 145 5.833667 TCCTAGATTGATCTTGGTGATACGT 59.166 40.000 17.17 0.00 45.88 3.57
145 146 7.002276 TCCTAGATTGATCTTGGTGATACGTA 58.998 38.462 17.17 0.00 45.88 3.57
146 147 7.504574 TCCTAGATTGATCTTGGTGATACGTAA 59.495 37.037 17.17 0.00 45.88 3.18
147 148 7.810282 CCTAGATTGATCTTGGTGATACGTAAG 59.190 40.741 11.74 0.00 42.44 2.34
148 149 7.348080 AGATTGATCTTGGTGATACGTAAGA 57.652 36.000 0.00 0.00 36.65 2.10
149 150 7.782049 AGATTGATCTTGGTGATACGTAAGAA 58.218 34.615 0.00 0.00 36.65 2.52
150 151 8.258007 AGATTGATCTTGGTGATACGTAAGAAA 58.742 33.333 0.00 0.00 36.65 2.52
151 152 8.786826 ATTGATCTTGGTGATACGTAAGAAAA 57.213 30.769 0.00 0.00 36.65 2.29
152 153 8.786826 TTGATCTTGGTGATACGTAAGAAAAT 57.213 30.769 0.00 0.00 36.65 1.82
153 154 8.786826 TGATCTTGGTGATACGTAAGAAAATT 57.213 30.769 0.00 0.00 36.65 1.82
154 155 9.226606 TGATCTTGGTGATACGTAAGAAAATTT 57.773 29.630 0.00 0.00 36.65 1.82
156 157 9.840427 ATCTTGGTGATACGTAAGAAAATTTTG 57.160 29.630 8.47 0.00 43.62 2.44
157 158 9.058174 TCTTGGTGATACGTAAGAAAATTTTGA 57.942 29.630 8.47 0.00 43.62 2.69
158 159 9.672086 CTTGGTGATACGTAAGAAAATTTTGAA 57.328 29.630 8.47 0.00 43.62 2.69
463 464 0.528017 TCTCGACATCACAGAGGTGC 59.472 55.000 0.00 0.00 44.87 5.01
464 465 0.799917 CTCGACATCACAGAGGTGCG 60.800 60.000 0.00 0.00 44.87 5.34
465 466 1.807165 CGACATCACAGAGGTGCGG 60.807 63.158 0.00 0.00 44.87 5.69
466 467 2.046892 ACATCACAGAGGTGCGGC 60.047 61.111 0.00 0.00 44.87 6.53
467 468 2.046988 CATCACAGAGGTGCGGCA 60.047 61.111 0.00 0.00 44.87 5.69
468 469 2.104859 CATCACAGAGGTGCGGCAG 61.105 63.158 1.18 0.00 44.87 4.85
469 470 3.320879 ATCACAGAGGTGCGGCAGG 62.321 63.158 1.18 0.00 44.87 4.85
470 471 4.007644 CACAGAGGTGCGGCAGGA 62.008 66.667 1.18 0.00 38.37 3.86
471 472 3.699894 ACAGAGGTGCGGCAGGAG 61.700 66.667 1.18 0.00 0.00 3.69
472 473 3.699894 CAGAGGTGCGGCAGGAGT 61.700 66.667 1.18 0.00 0.00 3.85
473 474 2.037367 AGAGGTGCGGCAGGAGTA 59.963 61.111 1.18 0.00 0.00 2.59
474 475 2.055042 AGAGGTGCGGCAGGAGTAG 61.055 63.158 1.18 0.00 0.00 2.57
475 476 2.283966 AGGTGCGGCAGGAGTAGT 60.284 61.111 1.18 0.00 0.00 2.73
476 477 1.000019 AGGTGCGGCAGGAGTAGTA 60.000 57.895 1.18 0.00 0.00 1.82
477 478 0.613853 AGGTGCGGCAGGAGTAGTAA 60.614 55.000 1.18 0.00 0.00 2.24
478 479 0.248289 GGTGCGGCAGGAGTAGTAAA 59.752 55.000 1.18 0.00 0.00 2.01
479 480 1.356938 GTGCGGCAGGAGTAGTAAAC 58.643 55.000 1.18 0.00 0.00 2.01
480 481 0.248289 TGCGGCAGGAGTAGTAAACC 59.752 55.000 0.00 0.00 0.00 3.27
481 482 0.461516 GCGGCAGGAGTAGTAAACCC 60.462 60.000 0.00 0.00 0.00 4.11
482 483 1.192428 CGGCAGGAGTAGTAAACCCT 58.808 55.000 0.00 0.00 31.16 4.34
483 484 2.381911 CGGCAGGAGTAGTAAACCCTA 58.618 52.381 0.00 0.00 30.27 3.53
484 485 2.762327 CGGCAGGAGTAGTAAACCCTAA 59.238 50.000 0.00 0.00 30.27 2.69
485 486 3.387050 CGGCAGGAGTAGTAAACCCTAAT 59.613 47.826 0.00 0.00 30.27 1.73
486 487 4.704965 GGCAGGAGTAGTAAACCCTAATG 58.295 47.826 0.00 0.00 30.27 1.90
487 488 4.127907 GCAGGAGTAGTAAACCCTAATGC 58.872 47.826 0.00 0.00 30.27 3.56
488 489 4.369182 CAGGAGTAGTAAACCCTAATGCG 58.631 47.826 0.00 0.00 30.06 4.73
489 490 4.098960 CAGGAGTAGTAAACCCTAATGCGA 59.901 45.833 0.00 0.00 30.06 5.10
490 491 4.341520 AGGAGTAGTAAACCCTAATGCGAG 59.658 45.833 0.00 0.00 30.06 5.03
491 492 4.501058 GGAGTAGTAAACCCTAATGCGAGG 60.501 50.000 0.00 0.00 36.23 4.63
497 498 2.510906 CCTAATGCGAGGGGGTGG 59.489 66.667 0.00 0.00 32.39 4.61
498 499 2.070039 CCTAATGCGAGGGGGTGGA 61.070 63.158 0.00 0.00 32.39 4.02
499 500 1.418908 CCTAATGCGAGGGGGTGGAT 61.419 60.000 0.00 0.00 32.39 3.41
500 501 1.348064 CTAATGCGAGGGGGTGGATA 58.652 55.000 0.00 0.00 0.00 2.59
501 502 1.697432 CTAATGCGAGGGGGTGGATAA 59.303 52.381 0.00 0.00 0.00 1.75
502 503 0.182775 AATGCGAGGGGGTGGATAAC 59.817 55.000 0.00 0.00 0.00 1.89
520 521 8.084073 GTGGATAACCATACATTTCATGAATGG 58.916 37.037 19.12 19.12 46.83 3.16
521 522 8.003629 TGGATAACCATACATTTCATGAATGGA 58.996 33.333 25.01 15.53 43.94 3.41
527 528 5.719100 ATACATTTCATGAATGGATGGGGT 58.281 37.500 18.36 8.11 45.62 4.95
528 529 4.330944 CATTTCATGAATGGATGGGGTG 57.669 45.455 9.40 0.00 41.19 4.61
529 530 2.457813 TTCATGAATGGATGGGGTGG 57.542 50.000 3.38 0.00 0.00 4.61
530 531 1.307878 TCATGAATGGATGGGGTGGT 58.692 50.000 0.00 0.00 0.00 4.16
531 532 1.063792 TCATGAATGGATGGGGTGGTG 60.064 52.381 0.00 0.00 0.00 4.17
532 533 0.397535 ATGAATGGATGGGGTGGTGC 60.398 55.000 0.00 0.00 0.00 5.01
533 534 1.000233 GAATGGATGGGGTGGTGCA 60.000 57.895 0.00 0.00 0.00 4.57
534 535 1.305213 AATGGATGGGGTGGTGCAC 60.305 57.895 8.80 8.80 0.00 4.57
535 536 3.643595 ATGGATGGGGTGGTGCACG 62.644 63.158 11.45 0.00 34.83 5.34
540 541 4.770874 GGGGTGGTGCACGCGTAT 62.771 66.667 13.44 0.00 46.12 3.06
541 542 3.192922 GGGTGGTGCACGCGTATC 61.193 66.667 13.44 7.69 37.54 2.24
542 543 2.433491 GGTGGTGCACGCGTATCA 60.433 61.111 13.44 10.71 34.83 2.15
543 544 2.030401 GGTGGTGCACGCGTATCAA 61.030 57.895 13.44 0.00 34.83 2.57
544 545 1.570347 GGTGGTGCACGCGTATCAAA 61.570 55.000 13.44 2.36 34.83 2.69
545 546 0.236187 GTGGTGCACGCGTATCAAAA 59.764 50.000 13.44 1.99 0.00 2.44
546 547 1.135803 GTGGTGCACGCGTATCAAAAT 60.136 47.619 13.44 0.00 0.00 1.82
547 548 1.537638 TGGTGCACGCGTATCAAAATT 59.462 42.857 13.44 0.00 0.00 1.82
548 549 1.910819 GGTGCACGCGTATCAAAATTG 59.089 47.619 13.44 0.00 0.00 2.32
549 550 2.413502 GGTGCACGCGTATCAAAATTGA 60.414 45.455 13.44 0.00 42.14 2.57
550 551 3.230355 GTGCACGCGTATCAAAATTGAA 58.770 40.909 13.44 0.00 41.13 2.69
551 552 3.851403 GTGCACGCGTATCAAAATTGAAT 59.149 39.130 13.44 0.00 41.13 2.57
552 553 3.850837 TGCACGCGTATCAAAATTGAATG 59.149 39.130 13.44 0.00 41.13 2.67
553 554 3.851403 GCACGCGTATCAAAATTGAATGT 59.149 39.130 13.44 0.00 41.13 2.71
554 555 4.258977 GCACGCGTATCAAAATTGAATGTG 60.259 41.667 13.44 6.20 41.13 3.21
555 556 4.851014 CACGCGTATCAAAATTGAATGTGT 59.149 37.500 13.44 5.70 41.13 3.72
556 557 4.851014 ACGCGTATCAAAATTGAATGTGTG 59.149 37.500 11.67 1.13 41.13 3.82
557 558 4.258977 CGCGTATCAAAATTGAATGTGTGC 60.259 41.667 0.00 0.00 41.13 4.57
558 559 4.031652 GCGTATCAAAATTGAATGTGTGCC 59.968 41.667 0.00 0.00 41.13 5.01
559 560 4.562394 CGTATCAAAATTGAATGTGTGCCC 59.438 41.667 0.00 0.00 41.13 5.36
560 561 4.620589 ATCAAAATTGAATGTGTGCCCA 57.379 36.364 0.00 0.00 41.13 5.36
561 562 4.620589 TCAAAATTGAATGTGTGCCCAT 57.379 36.364 0.00 0.00 33.55 4.00
562 563 4.316645 TCAAAATTGAATGTGTGCCCATG 58.683 39.130 0.00 0.00 33.55 3.66
563 564 2.389962 AATTGAATGTGTGCCCATGC 57.610 45.000 0.00 0.00 38.26 4.06
564 565 7.711828 TCAAAATTGAATGTGTGCCCATGCA 62.712 40.000 0.00 0.00 38.70 3.96
565 566 8.921097 TCAAAATTGAATGTGTGCCCATGCAT 62.921 38.462 0.00 0.00 41.35 3.96
573 574 3.996361 TGCCCATGCATTAGTTGGA 57.004 47.368 4.81 0.00 44.23 3.53
574 575 1.473258 TGCCCATGCATTAGTTGGAC 58.527 50.000 4.81 0.00 44.23 4.02
575 576 0.746659 GCCCATGCATTAGTTGGACC 59.253 55.000 4.81 0.00 37.47 4.46
576 577 1.402787 CCCATGCATTAGTTGGACCC 58.597 55.000 4.81 0.00 31.94 4.46
577 578 1.341877 CCCATGCATTAGTTGGACCCA 60.342 52.381 4.81 0.00 31.94 4.51
578 579 2.669781 CCATGCATTAGTTGGACCCAT 58.330 47.619 0.00 0.00 31.94 4.00
579 580 2.624838 CCATGCATTAGTTGGACCCATC 59.375 50.000 0.00 0.00 31.94 3.51
580 581 3.289836 CATGCATTAGTTGGACCCATCA 58.710 45.455 0.00 0.00 0.00 3.07
581 582 3.668141 TGCATTAGTTGGACCCATCAT 57.332 42.857 0.00 0.00 0.00 2.45
582 583 3.979911 TGCATTAGTTGGACCCATCATT 58.020 40.909 0.00 0.00 0.00 2.57
583 584 4.352009 TGCATTAGTTGGACCCATCATTT 58.648 39.130 0.00 0.00 0.00 2.32
584 585 5.514169 TGCATTAGTTGGACCCATCATTTA 58.486 37.500 0.00 0.00 0.00 1.40
585 586 5.954752 TGCATTAGTTGGACCCATCATTTAA 59.045 36.000 0.00 0.00 0.00 1.52
586 587 6.096705 TGCATTAGTTGGACCCATCATTTAAG 59.903 38.462 0.00 0.00 0.00 1.85
587 588 6.096846 GCATTAGTTGGACCCATCATTTAAGT 59.903 38.462 0.00 0.00 0.00 2.24
588 589 7.483307 CATTAGTTGGACCCATCATTTAAGTG 58.517 38.462 0.00 0.00 0.00 3.16
589 590 3.763897 AGTTGGACCCATCATTTAAGTGC 59.236 43.478 0.00 0.00 0.00 4.40
590 591 3.737559 TGGACCCATCATTTAAGTGCT 57.262 42.857 0.00 0.00 0.00 4.40
591 592 3.620488 TGGACCCATCATTTAAGTGCTC 58.380 45.455 0.00 0.00 0.00 4.26
592 593 3.010027 TGGACCCATCATTTAAGTGCTCA 59.990 43.478 0.00 0.00 0.00 4.26
593 594 4.210331 GGACCCATCATTTAAGTGCTCAT 58.790 43.478 0.00 0.00 0.00 2.90
594 595 4.646492 GGACCCATCATTTAAGTGCTCATT 59.354 41.667 0.00 0.00 0.00 2.57
595 596 5.127682 GGACCCATCATTTAAGTGCTCATTT 59.872 40.000 0.00 0.00 0.00 2.32
596 597 6.212888 ACCCATCATTTAAGTGCTCATTTC 57.787 37.500 0.00 0.00 0.00 2.17
597 598 5.127682 ACCCATCATTTAAGTGCTCATTTCC 59.872 40.000 0.00 0.00 0.00 3.13
598 599 5.452356 CCCATCATTTAAGTGCTCATTTCCC 60.452 44.000 0.00 0.00 0.00 3.97
599 600 5.452356 CCATCATTTAAGTGCTCATTTCCCC 60.452 44.000 0.00 0.00 0.00 4.81
600 601 4.671831 TCATTTAAGTGCTCATTTCCCCA 58.328 39.130 0.00 0.00 0.00 4.96
601 602 5.083122 TCATTTAAGTGCTCATTTCCCCAA 58.917 37.500 0.00 0.00 0.00 4.12
602 603 5.541868 TCATTTAAGTGCTCATTTCCCCAAA 59.458 36.000 0.00 0.00 0.00 3.28
603 604 6.213195 TCATTTAAGTGCTCATTTCCCCAAAT 59.787 34.615 0.00 0.00 31.91 2.32
604 605 6.432403 TTTAAGTGCTCATTTCCCCAAATT 57.568 33.333 0.00 0.00 28.97 1.82
605 606 3.967332 AGTGCTCATTTCCCCAAATTG 57.033 42.857 0.00 0.00 28.97 2.32
606 607 2.027837 AGTGCTCATTTCCCCAAATTGC 60.028 45.455 0.00 0.00 33.04 3.56
607 608 1.976404 TGCTCATTTCCCCAAATTGCA 59.024 42.857 0.00 0.00 36.93 4.08
608 609 2.289569 TGCTCATTTCCCCAAATTGCAC 60.290 45.455 0.00 0.00 35.56 4.57
609 610 2.289569 GCTCATTTCCCCAAATTGCACA 60.290 45.455 0.00 0.00 32.84 4.57
610 611 3.620472 GCTCATTTCCCCAAATTGCACAT 60.620 43.478 0.00 0.00 32.84 3.21
611 612 3.936453 CTCATTTCCCCAAATTGCACATG 59.064 43.478 0.00 0.00 28.97 3.21
612 613 3.327172 TCATTTCCCCAAATTGCACATGT 59.673 39.130 0.00 0.00 28.97 3.21
613 614 3.853355 TTTCCCCAAATTGCACATGTT 57.147 38.095 0.00 0.00 0.00 2.71
614 615 4.963318 TTTCCCCAAATTGCACATGTTA 57.037 36.364 0.00 0.00 0.00 2.41
615 616 4.533919 TTCCCCAAATTGCACATGTTAG 57.466 40.909 0.00 0.00 0.00 2.34
616 617 2.233431 TCCCCAAATTGCACATGTTAGC 59.767 45.455 0.00 0.00 0.00 3.09
617 618 2.234414 CCCCAAATTGCACATGTTAGCT 59.766 45.455 9.33 0.00 0.00 3.32
618 619 3.255725 CCCAAATTGCACATGTTAGCTG 58.744 45.455 9.33 0.17 0.00 4.24
619 620 3.056678 CCCAAATTGCACATGTTAGCTGA 60.057 43.478 9.33 0.00 0.00 4.26
620 621 4.558178 CCAAATTGCACATGTTAGCTGAA 58.442 39.130 9.33 0.00 0.00 3.02
621 622 4.989797 CCAAATTGCACATGTTAGCTGAAA 59.010 37.500 9.33 0.00 0.00 2.69
622 623 5.466058 CCAAATTGCACATGTTAGCTGAAAA 59.534 36.000 9.33 0.00 0.00 2.29
623 624 6.148150 CCAAATTGCACATGTTAGCTGAAAAT 59.852 34.615 9.33 0.00 0.00 1.82
624 625 7.308109 CCAAATTGCACATGTTAGCTGAAAATT 60.308 33.333 9.33 4.62 0.00 1.82
625 626 7.733402 AATTGCACATGTTAGCTGAAAATTT 57.267 28.000 9.33 0.00 0.00 1.82
626 627 7.733402 ATTGCACATGTTAGCTGAAAATTTT 57.267 28.000 2.28 2.28 0.00 1.82
627 628 6.768029 TGCACATGTTAGCTGAAAATTTTC 57.232 33.333 21.60 21.60 37.69 2.29
628 629 5.695816 TGCACATGTTAGCTGAAAATTTTCC 59.304 36.000 24.51 12.50 36.36 3.13
629 630 5.164061 GCACATGTTAGCTGAAAATTTTCCG 60.164 40.000 24.51 20.02 36.36 4.30
630 631 6.148948 CACATGTTAGCTGAAAATTTTCCGA 58.851 36.000 24.51 9.18 36.36 4.55
631 632 6.088085 CACATGTTAGCTGAAAATTTTCCGAC 59.912 38.462 24.51 15.10 36.36 4.79
632 633 4.778904 TGTTAGCTGAAAATTTTCCGACG 58.221 39.130 24.51 13.14 36.36 5.12
633 634 2.331809 AGCTGAAAATTTTCCGACGC 57.668 45.000 24.51 20.17 36.36 5.19
634 635 1.880027 AGCTGAAAATTTTCCGACGCT 59.120 42.857 24.51 21.64 36.36 5.07
635 636 1.978782 GCTGAAAATTTTCCGACGCTG 59.021 47.619 24.51 7.73 36.36 5.18
636 637 2.604614 GCTGAAAATTTTCCGACGCTGT 60.605 45.455 24.51 0.00 36.36 4.40
637 638 3.364565 GCTGAAAATTTTCCGACGCTGTA 60.365 43.478 24.51 5.29 36.36 2.74
638 639 4.778904 CTGAAAATTTTCCGACGCTGTAA 58.221 39.130 24.51 4.65 36.36 2.41
639 640 5.171147 TGAAAATTTTCCGACGCTGTAAA 57.829 34.783 24.51 2.35 36.36 2.01
640 641 5.579718 TGAAAATTTTCCGACGCTGTAAAA 58.420 33.333 24.51 2.17 36.36 1.52
641 642 5.456173 TGAAAATTTTCCGACGCTGTAAAAC 59.544 36.000 24.51 0.00 36.36 2.43
642 643 4.555348 AATTTTCCGACGCTGTAAAACA 57.445 36.364 0.00 0.00 0.00 2.83
643 644 3.322230 TTTTCCGACGCTGTAAAACAC 57.678 42.857 0.00 0.00 0.00 3.32
644 645 0.854062 TTCCGACGCTGTAAAACACG 59.146 50.000 0.00 0.00 0.00 4.49
645 646 1.154727 CCGACGCTGTAAAACACGC 60.155 57.895 0.00 0.00 0.00 5.34
646 647 1.554042 CCGACGCTGTAAAACACGCT 61.554 55.000 0.00 0.00 0.00 5.07
647 648 1.054574 CGACGCTGTAAAACACGCTA 58.945 50.000 0.00 0.00 0.00 4.26
648 649 1.452773 CGACGCTGTAAAACACGCTAA 59.547 47.619 0.00 0.00 0.00 3.09
649 650 2.091588 CGACGCTGTAAAACACGCTAAT 59.908 45.455 0.00 0.00 0.00 1.73
650 651 3.301379 CGACGCTGTAAAACACGCTAATA 59.699 43.478 0.00 0.00 0.00 0.98
651 652 4.201513 CGACGCTGTAAAACACGCTAATAA 60.202 41.667 0.00 0.00 0.00 1.40
652 653 5.594724 ACGCTGTAAAACACGCTAATAAA 57.405 34.783 0.00 0.00 0.00 1.40
653 654 5.988092 ACGCTGTAAAACACGCTAATAAAA 58.012 33.333 0.00 0.00 0.00 1.52
654 655 6.428799 ACGCTGTAAAACACGCTAATAAAAA 58.571 32.000 0.00 0.00 0.00 1.94
688 689 8.514136 AAAATGTATATCAAACCAAACGTGTG 57.486 30.769 0.00 0.00 0.00 3.82
689 690 5.037015 TGTATATCAAACCAAACGTGTGC 57.963 39.130 0.00 0.00 28.66 4.57
690 691 2.672188 TATCAAACCAAACGTGTGCG 57.328 45.000 0.00 0.00 44.93 5.34
700 701 2.620459 CGTGTGCGTGTGTGAGTG 59.380 61.111 0.00 0.00 0.00 3.51
701 702 2.870341 CGTGTGCGTGTGTGAGTGG 61.870 63.158 0.00 0.00 0.00 4.00
702 703 2.894879 TGTGCGTGTGTGAGTGGC 60.895 61.111 0.00 0.00 0.00 5.01
703 704 2.588877 GTGCGTGTGTGAGTGGCT 60.589 61.111 0.00 0.00 0.00 4.75
704 705 2.180204 GTGCGTGTGTGAGTGGCTT 61.180 57.895 0.00 0.00 0.00 4.35
705 706 1.451207 TGCGTGTGTGAGTGGCTTT 60.451 52.632 0.00 0.00 0.00 3.51
706 707 1.009675 GCGTGTGTGAGTGGCTTTG 60.010 57.895 0.00 0.00 0.00 2.77
707 708 1.009675 CGTGTGTGAGTGGCTTTGC 60.010 57.895 0.00 0.00 0.00 3.68
708 709 1.009675 GTGTGTGAGTGGCTTTGCG 60.010 57.895 0.00 0.00 0.00 4.85
709 710 2.050985 GTGTGAGTGGCTTTGCGC 60.051 61.111 0.00 0.00 38.13 6.09
718 719 3.808656 GCTTTGCGCCTCTGCTCC 61.809 66.667 4.18 0.00 35.36 4.70
719 720 3.130160 CTTTGCGCCTCTGCTCCC 61.130 66.667 4.18 0.00 35.36 4.30
720 721 3.907260 CTTTGCGCCTCTGCTCCCA 62.907 63.158 4.18 0.00 35.36 4.37
721 722 3.490031 TTTGCGCCTCTGCTCCCAA 62.490 57.895 4.18 0.00 35.36 4.12
722 723 4.704833 TGCGCCTCTGCTCCCAAC 62.705 66.667 4.18 0.00 35.36 3.77
724 725 3.710722 CGCCTCTGCTCCCAACCT 61.711 66.667 0.00 0.00 34.43 3.50
725 726 2.045536 GCCTCTGCTCCCAACCTG 60.046 66.667 0.00 0.00 33.53 4.00
726 727 2.596851 GCCTCTGCTCCCAACCTGA 61.597 63.158 0.00 0.00 33.53 3.86
727 728 2.069776 CCTCTGCTCCCAACCTGAA 58.930 57.895 0.00 0.00 0.00 3.02
728 729 0.401738 CCTCTGCTCCCAACCTGAAA 59.598 55.000 0.00 0.00 0.00 2.69
729 730 1.528129 CTCTGCTCCCAACCTGAAAC 58.472 55.000 0.00 0.00 0.00 2.78
730 731 1.072965 CTCTGCTCCCAACCTGAAACT 59.927 52.381 0.00 0.00 0.00 2.66
731 732 1.202806 TCTGCTCCCAACCTGAAACTG 60.203 52.381 0.00 0.00 0.00 3.16
732 733 0.843309 TGCTCCCAACCTGAAACTGA 59.157 50.000 0.00 0.00 0.00 3.41
733 734 1.214175 TGCTCCCAACCTGAAACTGAA 59.786 47.619 0.00 0.00 0.00 3.02
734 735 2.306847 GCTCCCAACCTGAAACTGAAA 58.693 47.619 0.00 0.00 0.00 2.69
735 736 2.693074 GCTCCCAACCTGAAACTGAAAA 59.307 45.455 0.00 0.00 0.00 2.29
736 737 3.490933 GCTCCCAACCTGAAACTGAAAAC 60.491 47.826 0.00 0.00 0.00 2.43
737 738 3.954258 CTCCCAACCTGAAACTGAAAACT 59.046 43.478 0.00 0.00 0.00 2.66
738 739 3.699038 TCCCAACCTGAAACTGAAAACTG 59.301 43.478 0.00 0.00 0.00 3.16
739 740 3.699038 CCCAACCTGAAACTGAAAACTGA 59.301 43.478 0.00 0.00 0.00 3.41
740 741 4.159506 CCCAACCTGAAACTGAAAACTGAA 59.840 41.667 0.00 0.00 0.00 3.02
741 742 5.337169 CCCAACCTGAAACTGAAAACTGAAA 60.337 40.000 0.00 0.00 0.00 2.69
742 743 6.162777 CCAACCTGAAACTGAAAACTGAAAA 58.837 36.000 0.00 0.00 0.00 2.29
743 744 6.648725 CCAACCTGAAACTGAAAACTGAAAAA 59.351 34.615 0.00 0.00 0.00 1.94
744 745 7.148590 CCAACCTGAAACTGAAAACTGAAAAAG 60.149 37.037 0.00 0.00 0.00 2.27
745 746 7.227049 ACCTGAAACTGAAAACTGAAAAAGA 57.773 32.000 0.00 0.00 0.00 2.52
746 747 7.315890 ACCTGAAACTGAAAACTGAAAAAGAG 58.684 34.615 0.00 0.00 0.00 2.85
747 748 7.176690 ACCTGAAACTGAAAACTGAAAAAGAGA 59.823 33.333 0.00 0.00 0.00 3.10
748 749 8.028938 CCTGAAACTGAAAACTGAAAAAGAGAA 58.971 33.333 0.00 0.00 0.00 2.87
749 750 9.410556 CTGAAACTGAAAACTGAAAAAGAGAAA 57.589 29.630 0.00 0.00 0.00 2.52
750 751 9.757227 TGAAACTGAAAACTGAAAAAGAGAAAA 57.243 25.926 0.00 0.00 0.00 2.29
902 907 2.079158 ACATCATGGCATGCGCTATAC 58.921 47.619 22.56 0.00 37.20 1.47
904 909 0.670239 TCATGGCATGCGCTATACCG 60.670 55.000 22.56 0.00 37.20 4.02
959 964 0.398664 CCCGTACTCTTCCTCCCCAT 60.399 60.000 0.00 0.00 0.00 4.00
1031 1036 3.785859 GCACGCCTGATCTCCCCA 61.786 66.667 0.00 0.00 0.00 4.96
1040 1045 1.834822 GATCTCCCCACCTCCTCCG 60.835 68.421 0.00 0.00 0.00 4.63
1183 1188 0.104304 GCGAAAGGAAGCGGATAGGA 59.896 55.000 0.00 0.00 0.00 2.94
1321 1326 1.890573 GCCATGTCCAAGGGCAAGTTA 60.891 52.381 0.00 0.00 46.92 2.24
1415 1420 0.878416 TGGCTTTGTTGGTGCGATAC 59.122 50.000 0.00 0.00 0.00 2.24
1502 1507 3.435671 GGTAACTGATTGCGCTTTGTAGT 59.564 43.478 9.73 3.96 0.00 2.73
1505 1510 4.147219 ACTGATTGCGCTTTGTAGTTTC 57.853 40.909 9.73 0.00 0.00 2.78
1549 1554 7.281100 CCTGTAGAAGGGAGAATTTATGTGTTC 59.719 40.741 0.00 0.00 43.15 3.18
1572 1577 1.398692 ATTTGTGCACGAACAAGGGT 58.601 45.000 21.75 1.96 40.93 4.34
1684 1689 8.873215 TTTTCTTTTCCATATGTTTTTACGCA 57.127 26.923 1.24 0.00 0.00 5.24
1686 1691 7.209471 TCTTTTCCATATGTTTTTACGCACT 57.791 32.000 1.24 0.00 0.00 4.40
1687 1692 7.653647 TCTTTTCCATATGTTTTTACGCACTT 58.346 30.769 1.24 0.00 0.00 3.16
1688 1693 8.784994 TCTTTTCCATATGTTTTTACGCACTTA 58.215 29.630 1.24 0.00 0.00 2.24
1690 1695 9.562583 TTTTCCATATGTTTTTACGCACTTATC 57.437 29.630 1.24 0.00 0.00 1.75
1704 1709 4.452114 CGCACTTATCATTATGCTTGCCTA 59.548 41.667 0.00 0.00 35.88 3.93
1720 1725 1.881324 GCCTACTAGGTAGCTCGAAGG 59.119 57.143 0.00 4.90 37.80 3.46
1880 1886 9.538508 TGTTCTAATGTTGAGATCAGTATCATG 57.461 33.333 0.00 0.00 34.28 3.07
1944 1950 0.959372 AAAGGCACTAGCAGCAGCAG 60.959 55.000 3.17 1.45 40.88 4.24
1947 1953 2.751913 GCACTAGCAGCAGCAGCAG 61.752 63.158 12.92 9.67 45.49 4.24
1960 2066 1.485032 GCAGCAGCAGCAACAACAAC 61.485 55.000 4.63 0.00 45.49 3.32
1961 2067 0.179132 CAGCAGCAGCAACAACAACA 60.179 50.000 3.17 0.00 45.49 3.33
2041 2147 2.559668 CAACTCATGGTTCTGGCACATT 59.440 45.455 0.00 0.00 34.52 2.71
2055 2161 2.686915 GGCACATTGATAGCAAGCTTCT 59.313 45.455 0.00 0.00 37.45 2.85
2086 2192 1.745653 GTCCATGGCTAGTTCTTTGGC 59.254 52.381 6.96 0.00 0.00 4.52
2099 2205 2.457598 TCTTTGGCGATACTCCAGTCT 58.542 47.619 0.00 0.00 34.66 3.24
2109 2215 5.239744 GCGATACTCCAGTCTTTCAGATCTA 59.760 44.000 0.00 0.00 0.00 1.98
2121 2233 7.339721 AGTCTTTCAGATCTATCTTTACGGACA 59.660 37.037 0.00 0.00 34.22 4.02
2171 2288 2.676744 TGACATTATCAGCACGCGG 58.323 52.632 12.47 0.00 31.91 6.46
2172 2289 0.174617 TGACATTATCAGCACGCGGA 59.825 50.000 12.47 0.00 31.91 5.54
2173 2290 0.855349 GACATTATCAGCACGCGGAG 59.145 55.000 12.47 3.23 0.00 4.63
2227 2344 2.650116 GCACCGGAGCTTCTGGAGA 61.650 63.158 17.33 0.00 45.95 3.71
2240 2357 0.392193 CTGGAGACCTGCGCTGAATT 60.392 55.000 16.65 0.00 0.00 2.17
2264 2381 3.686405 GCCCAAACCATCTCAGATGATGA 60.686 47.826 16.90 0.00 44.71 2.92
2362 2486 0.253894 TGGCCACACATCCATCTCAG 59.746 55.000 0.00 0.00 0.00 3.35
2366 2490 2.651455 CCACACATCCATCTCAGCATT 58.349 47.619 0.00 0.00 0.00 3.56
2444 2568 1.226945 GCCATACAACATTGCGGGC 60.227 57.895 6.16 6.16 35.69 6.13
2469 2593 1.679680 CCGCCGTCCTATAGAACTTGA 59.320 52.381 0.00 0.00 0.00 3.02
2509 2635 1.618343 TCTCGTCACAGAGAATGCCAA 59.382 47.619 0.00 0.00 43.56 4.52
2512 2638 3.411446 TCGTCACAGAGAATGCCAAAAT 58.589 40.909 0.00 0.00 0.00 1.82
2513 2639 3.820467 TCGTCACAGAGAATGCCAAAATT 59.180 39.130 0.00 0.00 0.00 1.82
2538 2664 1.526917 CCACTTCATCCATCCGGCC 60.527 63.158 0.00 0.00 0.00 6.13
2542 2668 0.181114 CTTCATCCATCCGGCCTTGA 59.819 55.000 0.00 0.00 0.00 3.02
2584 2710 4.915809 TCATCAATATCCCCATCCTTCTGT 59.084 41.667 0.00 0.00 0.00 3.41
2666 2795 1.475403 CTCCTCCTTCTCGTGCCTAA 58.525 55.000 0.00 0.00 0.00 2.69
2683 2812 4.141801 TGCCTAATAGTACTGAAACCGCAT 60.142 41.667 5.39 0.00 0.00 4.73
2693 2822 2.609459 CTGAAACCGCATCTCATGTACC 59.391 50.000 0.00 0.00 0.00 3.34
2709 2838 5.481473 TCATGTACCCGGTTTTAGTTCTACT 59.519 40.000 0.00 0.00 0.00 2.57
2710 2839 6.663093 TCATGTACCCGGTTTTAGTTCTACTA 59.337 38.462 0.00 0.00 0.00 1.82
2767 2897 7.014808 GTCTCCATAGCTCTAACTTCCTATTGT 59.985 40.741 0.00 0.00 0.00 2.71
2821 2951 0.679002 ATCCGCAAAGAGCATGCACT 60.679 50.000 21.98 17.04 46.13 4.40
2826 2956 2.019249 GCAAAGAGCATGCACTATGGA 58.981 47.619 21.98 0.00 43.29 3.41
2856 2986 4.501571 CCTTGTATATCCCTTGTGACCTCG 60.502 50.000 0.00 0.00 0.00 4.63
2883 3014 6.295236 CCATCACCAAAGCAAAAAGATAAGGA 60.295 38.462 0.00 0.00 0.00 3.36
2886 3017 6.323739 TCACCAAAGCAAAAAGATAAGGACTT 59.676 34.615 0.00 0.00 0.00 3.01
2907 3038 1.842381 AAGCTGACCCCTGGTGTAGC 61.842 60.000 9.81 9.81 40.54 3.58
2909 3040 3.000819 TGACCCCTGGTGTAGCCG 61.001 66.667 0.00 0.00 41.21 5.52
2919 3050 4.885325 CCCTGGTGTAGCCGTATTTTAATT 59.115 41.667 0.00 0.00 41.21 1.40
2938 3069 0.037326 TGGGAAGTCATCAGTGTCGC 60.037 55.000 0.00 0.00 0.00 5.19
3028 3159 3.288092 GGGACTTTGTGTTTCTCCAAGT 58.712 45.455 0.00 0.00 0.00 3.16
3030 3161 4.200092 GGACTTTGTGTTTCTCCAAGTCT 58.800 43.478 9.55 0.00 0.00 3.24
3041 3172 3.176411 TCTCCAAGTCTCACCACATGAT 58.824 45.455 0.00 0.00 36.48 2.45
3046 3177 5.426509 TCCAAGTCTCACCACATGATATTCT 59.573 40.000 0.00 0.00 36.48 2.40
3093 3224 5.569355 TCCAAGTCAATGAACACCATATGT 58.431 37.500 1.24 0.00 46.42 2.29
3105 3236 5.835113 ACACCATATGTTTGCTTGGTATC 57.165 39.130 1.24 0.00 38.98 2.24
3106 3237 5.509498 ACACCATATGTTTGCTTGGTATCT 58.491 37.500 1.24 0.00 38.98 1.98
3107 3238 5.951747 ACACCATATGTTTGCTTGGTATCTT 59.048 36.000 1.24 0.00 38.98 2.40
3108 3239 7.116075 ACACCATATGTTTGCTTGGTATCTTA 58.884 34.615 1.24 0.00 38.98 2.10
3109 3240 7.779798 ACACCATATGTTTGCTTGGTATCTTAT 59.220 33.333 1.24 0.00 38.98 1.73
3110 3241 8.292448 CACCATATGTTTGCTTGGTATCTTATC 58.708 37.037 1.24 0.00 40.44 1.75
3111 3242 7.998383 ACCATATGTTTGCTTGGTATCTTATCA 59.002 33.333 1.24 0.00 40.62 2.15
3112 3243 9.017509 CCATATGTTTGCTTGGTATCTTATCAT 57.982 33.333 1.24 0.00 0.00 2.45
3207 3339 5.313712 TCCAAAGAGGAAAATGACTGTACC 58.686 41.667 0.00 0.00 45.65 3.34
3209 3341 5.412904 CCAAAGAGGAAAATGACTGTACCTC 59.587 44.000 0.00 0.00 42.64 3.85
3215 3347 4.396166 GGAAAATGACTGTACCTCATGTGG 59.604 45.833 12.29 12.29 0.00 4.17
3226 3358 2.848694 ACCTCATGTGGATCAGATTGGT 59.151 45.455 20.43 0.00 0.00 3.67
3268 3400 0.538977 ATGCCCATACATCCTGCAGC 60.539 55.000 8.66 0.00 35.10 5.25
3290 3422 5.531287 AGCGTTTCAAATCACTTACCTTCTT 59.469 36.000 0.00 0.00 0.00 2.52
3307 3439 5.188434 CCTTCTTTGCCTGACTCATATCAA 58.812 41.667 0.00 0.00 0.00 2.57
3377 3509 9.944376 TCTGTTGCTCTTATAGAATAACTTTGT 57.056 29.630 0.00 0.00 0.00 2.83
3465 3598 8.915036 TGTAGTCTTAATCACTTCCCTATTCTC 58.085 37.037 0.00 0.00 0.00 2.87
3467 3600 7.136203 AGTCTTAATCACTTCCCTATTCTCCT 58.864 38.462 0.00 0.00 0.00 3.69
3471 3604 6.487299 AATCACTTCCCTATTCTCCTGTAC 57.513 41.667 0.00 0.00 0.00 2.90
3570 3704 2.525368 TGCAGAGGTAGCACTAACTGA 58.475 47.619 0.00 0.00 37.02 3.41
3587 3721 2.114616 CTGACTGAGATAGGGGCACTT 58.885 52.381 0.00 0.00 0.00 3.16
3590 3724 3.031736 GACTGAGATAGGGGCACTTACA 58.968 50.000 0.00 0.00 0.00 2.41
3597 3731 4.835615 AGATAGGGGCACTTACACTGATAG 59.164 45.833 0.00 0.00 0.00 2.08
3640 3774 3.261643 TGAAGCTAGAGATGAGGTTGCAA 59.738 43.478 0.00 0.00 34.87 4.08
3643 3777 4.006319 AGCTAGAGATGAGGTTGCAAAAC 58.994 43.478 0.00 0.00 0.00 2.43
3662 3796 1.079197 CTGCACTGCATCCGTGGTA 60.079 57.895 3.64 0.00 38.13 3.25
3684 3827 0.324275 TATGGAGTTTGGCCTTGGCC 60.324 55.000 22.91 22.91 0.00 5.36
3686 3829 2.278330 GGAGTTTGGCCTTGGCCAG 61.278 63.158 29.22 0.00 41.27 4.85
3688 3831 0.251165 GAGTTTGGCCTTGGCCAGTA 60.251 55.000 29.22 20.04 41.27 2.74
3737 3880 2.884639 CCCAGTGGAACGAAAATCTGTT 59.115 45.455 11.95 0.00 45.86 3.16
3871 4014 8.256611 TCAGTAGTAATCTTTGTTTGCTGATC 57.743 34.615 0.00 0.00 0.00 2.92
4111 4254 3.997021 GTCTTCACATGGTACCTCACTTG 59.003 47.826 14.36 5.74 0.00 3.16
4116 4259 4.819630 TCACATGGTACCTCACTTGTTTTC 59.180 41.667 14.36 0.00 0.00 2.29
4119 4262 4.081322 TGGTACCTCACTTGTTTTCTCC 57.919 45.455 14.36 0.00 0.00 3.71
4194 4337 8.286191 TCATGATACCTGTATGCTGTCTATAG 57.714 38.462 0.00 0.00 0.00 1.31
4196 4339 5.419155 TGATACCTGTATGCTGTCTATAGCC 59.581 44.000 0.00 0.00 43.02 3.93
4211 4354 8.096621 TGTCTATAGCCTAGATAGATAGCTGT 57.903 38.462 0.00 0.00 38.02 4.40
4316 4459 3.134804 AGCTAGTTTCACCAGTCAACAGT 59.865 43.478 0.00 0.00 0.00 3.55
4514 4660 4.894784 TGGAGAACACCTGAATCTGTAAC 58.105 43.478 0.00 0.00 0.00 2.50
4605 4751 6.751514 TGCCTTAATTAGAAGCGAAAATCA 57.248 33.333 0.00 0.00 0.00 2.57
4643 4789 0.038166 ATGACCTTGTTGGCGTCCAT 59.962 50.000 0.00 0.00 40.22 3.41
4721 4867 1.098050 CCTCACTATTGGCCTGCAAC 58.902 55.000 3.32 0.00 0.00 4.17
4742 4898 3.320826 ACCAAACCAAGCAAGTTATGGTC 59.679 43.478 7.42 0.00 46.46 4.02
4766 4922 7.602265 GTCAATACATTAAATTTGCCACCACTT 59.398 33.333 0.00 0.00 0.00 3.16
4767 4923 7.816995 TCAATACATTAAATTTGCCACCACTTC 59.183 33.333 0.00 0.00 0.00 3.01
4768 4924 5.806654 ACATTAAATTTGCCACCACTTCT 57.193 34.783 0.00 0.00 0.00 2.85
4804 4961 5.386958 AATTCCTATCATGTGCATGCATC 57.613 39.130 25.64 17.45 38.65 3.91
4816 4973 2.703798 ATGCATCGCACAGGGCAAC 61.704 57.895 0.00 0.00 43.04 4.17
4950 5107 2.500504 GTCTTCCGTCTCCCACCTTTAT 59.499 50.000 0.00 0.00 0.00 1.40
5012 5169 6.183360 CCAACTGTTTTTGCTTAATGTTGCTT 60.183 34.615 0.00 0.00 34.17 3.91
5021 5178 9.677567 TTTTGCTTAATGTTGCTTACTTTCTAG 57.322 29.630 0.00 0.00 0.00 2.43
5022 5179 7.979444 TGCTTAATGTTGCTTACTTTCTAGT 57.021 32.000 0.00 0.00 38.44 2.57
5025 5182 8.932791 GCTTAATGTTGCTTACTTTCTAGTACA 58.067 33.333 0.00 0.00 36.61 2.90
5027 5184 9.991906 TTAATGTTGCTTACTTTCTAGTACAGT 57.008 29.630 0.00 0.00 36.61 3.55
5203 5360 3.121688 AGCTTTTGATCTCTCCCTCCAT 58.878 45.455 0.00 0.00 0.00 3.41
5252 5409 7.854422 GGTTAAGCTTTAGTGCGGTAATTAATC 59.146 37.037 3.20 0.00 38.13 1.75
5255 5412 4.769215 CTTTAGTGCGGTAATTAATCGGC 58.231 43.478 10.26 5.50 0.00 5.54
5490 5649 0.877071 AGCATGTGCCTTTGAACTCG 59.123 50.000 0.57 0.00 43.38 4.18
5502 5661 4.201851 CCTTTGAACTCGAATGCCTACATG 60.202 45.833 0.00 0.00 36.36 3.21
5532 5691 8.197592 TCTCCTGTTGGTAGATAAACTGTTAA 57.802 34.615 0.00 0.00 34.23 2.01
6071 6249 1.269723 AGAGTTGTCTGATTCGTCGCA 59.730 47.619 0.00 0.00 0.00 5.10
6084 6262 1.300620 GTCGCACCACACAGCACTA 60.301 57.895 0.00 0.00 0.00 2.74
6103 6281 0.399454 ACCAAGCTGCTCATCTGTGT 59.601 50.000 1.00 0.00 0.00 3.72
6110 6288 2.393768 GCTCATCTGTGTGCGTGGG 61.394 63.158 0.00 0.00 35.44 4.61
6141 6319 3.945640 ACTTGGTTCAGTTGGTTACCT 57.054 42.857 2.07 0.00 0.00 3.08
6171 6350 1.765597 GAAACCGACCTGACCCCTGT 61.766 60.000 0.00 0.00 0.00 4.00
6192 6371 1.144936 GATCTCCCTTGTCCTGCGG 59.855 63.158 0.00 0.00 0.00 5.69
6303 6486 4.727507 TGAGTTTGGCAGCTGTTAAAAA 57.272 36.364 16.64 8.19 0.00 1.94
6321 6504 3.349488 AAAAAGGCAGTTCGTAACAGC 57.651 42.857 6.58 6.58 42.45 4.40
6417 6600 7.012327 GGTAATCTGAATGAAACATTCGATCCA 59.988 37.037 20.03 13.78 0.00 3.41
6439 6622 6.156949 TCCAGCTATTCTTATTCTTCACCTGT 59.843 38.462 0.00 0.00 0.00 4.00
6443 6626 7.988028 AGCTATTCTTATTCTTCACCTGTAACC 59.012 37.037 0.00 0.00 0.00 2.85
6448 6631 3.655276 TTCTTCACCTGTAACCGAGTC 57.345 47.619 0.00 0.00 0.00 3.36
6451 6634 0.601558 TCACCTGTAACCGAGTCTGC 59.398 55.000 0.00 0.00 0.00 4.26
6467 6650 3.153919 GTCTGCATGGAAAGTTTACCCA 58.846 45.455 0.00 0.00 0.00 4.51
6472 6655 3.572255 GCATGGAAAGTTTACCCACAGAA 59.428 43.478 0.00 0.00 32.07 3.02
6479 6662 6.533723 GGAAAGTTTACCCACAGAAAAAGTTG 59.466 38.462 0.00 0.00 0.00 3.16
6499 6682 1.202336 GCCTTTATGTGCTGTCATGGC 60.202 52.381 0.00 0.00 30.99 4.40
6594 6777 2.214376 AAAGGGCAATCCGATGAACA 57.786 45.000 0.00 0.00 41.52 3.18
6617 6800 1.609320 GCTCCCTTTTGCGAAGAGTCT 60.609 52.381 1.53 0.00 0.00 3.24
6626 6809 1.412710 TGCGAAGAGTCTGACCACTTT 59.587 47.619 15.37 2.51 0.00 2.66
6641 6824 2.629617 CCACTTTGGGTCTTGAAAGCAT 59.370 45.455 0.00 0.00 33.25 3.79
6644 6827 4.038402 CACTTTGGGTCTTGAAAGCATCTT 59.962 41.667 0.00 0.00 33.25 2.40
6645 6828 4.651045 ACTTTGGGTCTTGAAAGCATCTTT 59.349 37.500 0.00 0.00 33.25 2.52
6646 6829 4.853924 TTGGGTCTTGAAAGCATCTTTC 57.146 40.909 11.26 11.26 0.00 2.62
6653 6836 5.923114 GTCTTGAAAGCATCTTTCTTTTCCC 59.077 40.000 17.06 1.75 34.24 3.97
6654 6837 5.598005 TCTTGAAAGCATCTTTCTTTTCCCA 59.402 36.000 17.06 0.00 34.24 4.37
6656 6839 3.923017 AAGCATCTTTCTTTTCCCACG 57.077 42.857 0.00 0.00 0.00 4.94
6657 6840 1.541588 AGCATCTTTCTTTTCCCACGC 59.458 47.619 0.00 0.00 0.00 5.34
6665 6900 0.883833 CTTTTCCCACGCTTCTGCAT 59.116 50.000 0.00 0.00 39.64 3.96
6669 6904 0.107703 TCCCACGCTTCTGCATAAGG 60.108 55.000 13.15 6.42 39.64 2.69
6670 6905 0.392998 CCCACGCTTCTGCATAAGGT 60.393 55.000 13.15 6.97 39.64 3.50
6672 6907 1.131126 CCACGCTTCTGCATAAGGTTG 59.869 52.381 13.15 3.04 39.64 3.77
6673 6908 1.806542 CACGCTTCTGCATAAGGTTGT 59.193 47.619 13.15 0.00 39.64 3.32
6674 6909 2.226437 CACGCTTCTGCATAAGGTTGTT 59.774 45.455 13.15 0.00 39.64 2.83
6675 6910 2.884639 ACGCTTCTGCATAAGGTTGTTT 59.115 40.909 13.15 0.00 39.64 2.83
6682 6980 4.278170 TCTGCATAAGGTTGTTTCCAAGTG 59.722 41.667 0.00 0.00 0.00 3.16
6683 6981 3.320541 TGCATAAGGTTGTTTCCAAGTGG 59.679 43.478 0.00 0.00 0.00 4.00
6693 6991 2.614983 GTTTCCAAGTGGCGTTGTTAGA 59.385 45.455 0.00 0.00 34.44 2.10
6702 7005 1.128692 GGCGTTGTTAGATCAGCACAC 59.871 52.381 0.00 0.00 0.00 3.82
6719 7022 0.107703 CACGATAAAGCAGGCAGGGA 60.108 55.000 0.00 0.00 0.00 4.20
6732 7035 3.768757 CAGGCAGGGATAATTTGGTTTCA 59.231 43.478 0.00 0.00 0.00 2.69
6772 7075 5.928976 TCCTGAGTATTGTGTCCATATTGG 58.071 41.667 0.00 0.00 39.43 3.16
6781 7084 3.521531 TGTGTCCATATTGGCCTGACTTA 59.478 43.478 3.32 0.00 37.47 2.24
6785 7088 6.770785 GTGTCCATATTGGCCTGACTTATAAA 59.229 38.462 3.32 0.00 37.47 1.40
6811 7114 0.035439 GGCGAGACCCTCATGGAAAA 60.035 55.000 0.00 0.00 38.00 2.29
6813 7116 1.943340 GCGAGACCCTCATGGAAAATC 59.057 52.381 0.00 0.00 38.00 2.17
6814 7117 2.565841 CGAGACCCTCATGGAAAATCC 58.434 52.381 0.00 0.00 38.00 3.01
6831 7134 2.661176 TCCCCAAGGATTAGAGTGGT 57.339 50.000 0.00 0.00 37.19 4.16
6884 7188 9.595823 CTATTTCTAAGATTTGAAGTCCCGTTA 57.404 33.333 0.00 0.00 0.00 3.18
6900 7204 2.353579 CCGTTAACCGAATAAGCCCTTG 59.646 50.000 0.00 0.00 39.56 3.61
6921 7225 1.398390 GCGAGATAAACACAAGGCCAG 59.602 52.381 5.01 0.00 0.00 4.85
6932 7236 3.053693 ACACAAGGCCAGGAGCAATATTA 60.054 43.478 5.01 0.00 46.50 0.98
6956 7260 3.603401 CGGAAGTGCGTCTATAGTACGTC 60.603 52.174 19.10 14.11 42.26 4.34
6957 7261 3.303659 GGAAGTGCGTCTATAGTACGTCC 60.304 52.174 19.10 16.11 42.67 4.79
6958 7262 2.910199 AGTGCGTCTATAGTACGTCCA 58.090 47.619 19.10 11.09 42.26 4.02
6959 7263 3.273434 AGTGCGTCTATAGTACGTCCAA 58.727 45.455 19.10 6.87 42.26 3.53
6960 7264 3.691118 AGTGCGTCTATAGTACGTCCAAA 59.309 43.478 19.10 5.22 42.26 3.28
6961 7265 3.788163 GTGCGTCTATAGTACGTCCAAAC 59.212 47.826 19.10 10.67 42.26 2.93
6962 7266 3.439825 TGCGTCTATAGTACGTCCAAACA 59.560 43.478 19.10 9.64 42.26 2.83
6963 7267 4.082841 TGCGTCTATAGTACGTCCAAACAA 60.083 41.667 19.10 1.69 42.26 2.83
6965 7269 5.345741 GCGTCTATAGTACGTCCAAACAAAA 59.654 40.000 19.10 0.00 42.26 2.44
6966 7270 6.128849 GCGTCTATAGTACGTCCAAACAAAAA 60.129 38.462 19.10 0.00 42.26 1.94
6999 7306 5.486526 AGAACCAACAAACAAAATGCTTCA 58.513 33.333 0.00 0.00 0.00 3.02
7029 7337 2.866762 GGTTAGATCCAGCAAACTAGCG 59.133 50.000 0.00 0.00 40.15 4.26
7125 7433 1.913762 CCTGAGGTTCTCCGGGTGT 60.914 63.158 0.00 0.00 39.05 4.16
7128 7436 2.928396 AGGTTCTCCGGGTGTGGG 60.928 66.667 0.00 0.00 39.05 4.61
7135 7443 3.566210 CCGGGTGTGGGTTGGACT 61.566 66.667 0.00 0.00 0.00 3.85
7142 7450 2.203280 TGGGTTGGACTTGGCACG 60.203 61.111 0.00 0.00 0.00 5.34
7283 7591 1.136774 CGATCTCCGTCAGCGACAA 59.863 57.895 8.91 0.00 41.33 3.18
7329 7637 0.399949 ATATCCGGCCCAGGAACTCA 60.400 55.000 3.21 0.00 44.50 3.41
7400 7708 1.876156 CTGGAACCTGACACAAGAAGC 59.124 52.381 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.844357 CGTACTCGCGACGATTCAAAT 59.156 47.619 12.88 0.00 42.98 2.32
9 10 1.136000 TCGTACTCGCGACGATTCAAA 60.136 47.619 16.28 0.00 43.99 2.69
10 11 0.443478 TCGTACTCGCGACGATTCAA 59.557 50.000 16.28 0.00 43.99 2.69
11 12 2.080700 TCGTACTCGCGACGATTCA 58.919 52.632 16.28 0.00 43.99 2.57
12 13 4.961622 TCGTACTCGCGACGATTC 57.038 55.556 16.28 0.51 43.99 2.52
18 19 0.741927 TGATGGAGTCGTACTCGCGA 60.742 55.000 9.26 9.26 45.96 5.87
19 20 0.308068 ATGATGGAGTCGTACTCGCG 59.692 55.000 0.00 0.00 45.96 5.87
20 21 1.335142 GGATGATGGAGTCGTACTCGC 60.335 57.143 8.33 3.96 45.96 5.03
21 22 1.069838 CGGATGATGGAGTCGTACTCG 60.070 57.143 8.33 0.00 45.96 4.18
22 23 1.335142 GCGGATGATGGAGTCGTACTC 60.335 57.143 6.50 6.50 44.32 2.59
23 24 0.669077 GCGGATGATGGAGTCGTACT 59.331 55.000 0.00 0.00 0.00 2.73
24 25 0.660595 CGCGGATGATGGAGTCGTAC 60.661 60.000 0.00 0.00 0.00 3.67
25 26 1.099295 ACGCGGATGATGGAGTCGTA 61.099 55.000 12.47 0.00 0.00 3.43
26 27 1.945354 AACGCGGATGATGGAGTCGT 61.945 55.000 12.47 0.00 0.00 4.34
27 28 1.209275 GAACGCGGATGATGGAGTCG 61.209 60.000 12.47 0.00 0.00 4.18
28 29 0.103208 AGAACGCGGATGATGGAGTC 59.897 55.000 12.47 0.00 0.00 3.36
29 30 1.338337 CTAGAACGCGGATGATGGAGT 59.662 52.381 12.47 0.00 0.00 3.85
30 31 1.338337 ACTAGAACGCGGATGATGGAG 59.662 52.381 12.47 0.00 0.00 3.86
31 32 1.399714 ACTAGAACGCGGATGATGGA 58.600 50.000 12.47 0.00 0.00 3.41
32 33 3.050619 GTTACTAGAACGCGGATGATGG 58.949 50.000 12.47 0.00 0.00 3.51
33 34 2.719556 CGTTACTAGAACGCGGATGATG 59.280 50.000 12.47 0.00 36.82 3.07
34 35 2.996155 CGTTACTAGAACGCGGATGAT 58.004 47.619 12.47 0.00 36.82 2.45
35 36 2.463553 CGTTACTAGAACGCGGATGA 57.536 50.000 12.47 0.00 36.82 2.92
59 60 7.659738 TTCATACCTTTGAAGATCGCTAAGCG 61.660 42.308 0.00 0.00 40.75 4.68
60 61 5.050490 TCATACCTTTGAAGATCGCTAAGC 58.950 41.667 7.09 0.00 0.00 3.09
71 72 3.826524 TGTGCACCTTCATACCTTTGAA 58.173 40.909 15.69 0.00 34.55 2.69
72 73 3.500448 TGTGCACCTTCATACCTTTGA 57.500 42.857 15.69 0.00 0.00 2.69
73 74 3.129287 GGATGTGCACCTTCATACCTTTG 59.871 47.826 15.69 0.00 0.00 2.77
74 75 3.010584 AGGATGTGCACCTTCATACCTTT 59.989 43.478 15.69 0.00 33.55 3.11
75 76 2.578021 AGGATGTGCACCTTCATACCTT 59.422 45.455 15.69 0.00 33.55 3.50
76 77 2.171448 GAGGATGTGCACCTTCATACCT 59.829 50.000 15.69 11.60 37.93 3.08
77 78 2.171448 AGAGGATGTGCACCTTCATACC 59.829 50.000 15.69 7.09 37.93 2.73
78 79 3.133721 AGAGAGGATGTGCACCTTCATAC 59.866 47.826 15.69 1.24 37.93 2.39
79 80 3.378512 AGAGAGGATGTGCACCTTCATA 58.621 45.455 15.69 0.00 37.93 2.15
80 81 2.170187 GAGAGAGGATGTGCACCTTCAT 59.830 50.000 15.69 9.13 37.93 2.57
81 82 1.552337 GAGAGAGGATGTGCACCTTCA 59.448 52.381 15.69 0.00 37.93 3.02
82 83 1.830477 AGAGAGAGGATGTGCACCTTC 59.170 52.381 15.69 11.26 37.93 3.46
83 84 1.830477 GAGAGAGAGGATGTGCACCTT 59.170 52.381 15.69 0.93 37.93 3.50
84 85 1.006998 AGAGAGAGAGGATGTGCACCT 59.993 52.381 15.69 3.77 40.80 4.00
85 86 1.408702 GAGAGAGAGAGGATGTGCACC 59.591 57.143 15.69 0.00 0.00 5.01
86 87 2.378038 AGAGAGAGAGAGGATGTGCAC 58.622 52.381 10.75 10.75 0.00 4.57
87 88 2.759535 CAAGAGAGAGAGAGGATGTGCA 59.240 50.000 0.00 0.00 0.00 4.57
88 89 2.760092 ACAAGAGAGAGAGAGGATGTGC 59.240 50.000 0.00 0.00 0.00 4.57
89 90 4.220382 ACAACAAGAGAGAGAGAGGATGTG 59.780 45.833 0.00 0.00 0.00 3.21
90 91 4.415596 ACAACAAGAGAGAGAGAGGATGT 58.584 43.478 0.00 0.00 0.00 3.06
91 92 5.404466 AACAACAAGAGAGAGAGAGGATG 57.596 43.478 0.00 0.00 0.00 3.51
92 93 6.489603 TCTAACAACAAGAGAGAGAGAGGAT 58.510 40.000 0.00 0.00 0.00 3.24
93 94 5.882040 TCTAACAACAAGAGAGAGAGAGGA 58.118 41.667 0.00 0.00 0.00 3.71
94 95 6.582677 TTCTAACAACAAGAGAGAGAGAGG 57.417 41.667 0.00 0.00 0.00 3.69
95 96 8.055279 AGATTCTAACAACAAGAGAGAGAGAG 57.945 38.462 0.00 0.00 0.00 3.20
96 97 7.122055 GGAGATTCTAACAACAAGAGAGAGAGA 59.878 40.741 0.00 0.00 0.00 3.10
97 98 7.122650 AGGAGATTCTAACAACAAGAGAGAGAG 59.877 40.741 0.00 0.00 0.00 3.20
98 99 6.951198 AGGAGATTCTAACAACAAGAGAGAGA 59.049 38.462 0.00 0.00 0.00 3.10
99 100 7.169158 AGGAGATTCTAACAACAAGAGAGAG 57.831 40.000 0.00 0.00 0.00 3.20
100 101 8.110271 TCTAGGAGATTCTAACAACAAGAGAGA 58.890 37.037 0.00 0.00 0.00 3.10
101 102 8.287439 TCTAGGAGATTCTAACAACAAGAGAG 57.713 38.462 0.00 0.00 0.00 3.20
102 103 8.830915 ATCTAGGAGATTCTAACAACAAGAGA 57.169 34.615 0.00 0.00 28.69 3.10
103 104 9.311916 CAATCTAGGAGATTCTAACAACAAGAG 57.688 37.037 0.00 0.00 42.67 2.85
104 105 9.035890 TCAATCTAGGAGATTCTAACAACAAGA 57.964 33.333 0.00 0.00 42.67 3.02
105 106 9.829507 ATCAATCTAGGAGATTCTAACAACAAG 57.170 33.333 0.00 0.00 42.67 3.16
106 107 9.823647 GATCAATCTAGGAGATTCTAACAACAA 57.176 33.333 0.00 0.00 42.67 2.83
107 108 9.206690 AGATCAATCTAGGAGATTCTAACAACA 57.793 33.333 0.00 0.00 42.67 3.33
110 111 8.646004 CCAAGATCAATCTAGGAGATTCTAACA 58.354 37.037 0.00 0.00 42.67 2.41
111 112 8.646900 ACCAAGATCAATCTAGGAGATTCTAAC 58.353 37.037 0.00 0.00 42.67 2.34
112 113 8.646004 CACCAAGATCAATCTAGGAGATTCTAA 58.354 37.037 0.00 0.00 42.67 2.10
113 114 8.007153 TCACCAAGATCAATCTAGGAGATTCTA 58.993 37.037 0.00 0.00 42.67 2.10
114 115 6.843333 TCACCAAGATCAATCTAGGAGATTCT 59.157 38.462 0.00 0.00 42.67 2.40
115 116 7.060383 TCACCAAGATCAATCTAGGAGATTC 57.940 40.000 0.00 0.00 42.67 2.52
116 117 7.630005 ATCACCAAGATCAATCTAGGAGATT 57.370 36.000 0.00 0.00 45.23 2.40
117 118 7.093988 CGTATCACCAAGATCAATCTAGGAGAT 60.094 40.741 0.00 0.00 38.19 2.75
118 119 6.207614 CGTATCACCAAGATCAATCTAGGAGA 59.792 42.308 0.00 0.00 38.19 3.71
119 120 6.015856 ACGTATCACCAAGATCAATCTAGGAG 60.016 42.308 0.00 0.00 38.19 3.69
120 121 5.833667 ACGTATCACCAAGATCAATCTAGGA 59.166 40.000 0.00 0.00 38.19 2.94
121 122 6.090483 ACGTATCACCAAGATCAATCTAGG 57.910 41.667 0.00 0.00 38.19 3.02
122 123 8.568794 TCTTACGTATCACCAAGATCAATCTAG 58.431 37.037 0.00 0.00 38.19 2.43
123 124 8.459911 TCTTACGTATCACCAAGATCAATCTA 57.540 34.615 0.00 0.00 38.19 1.98
124 125 7.348080 TCTTACGTATCACCAAGATCAATCT 57.652 36.000 0.00 0.00 38.19 2.40
125 126 8.420374 TTTCTTACGTATCACCAAGATCAATC 57.580 34.615 0.00 0.00 38.19 2.67
126 127 8.786826 TTTTCTTACGTATCACCAAGATCAAT 57.213 30.769 0.00 0.00 38.19 2.57
127 128 8.786826 ATTTTCTTACGTATCACCAAGATCAA 57.213 30.769 0.00 0.00 38.19 2.57
128 129 8.786826 AATTTTCTTACGTATCACCAAGATCA 57.213 30.769 0.00 0.00 38.19 2.92
130 131 9.840427 CAAAATTTTCTTACGTATCACCAAGAT 57.160 29.630 0.00 0.00 40.86 2.40
131 132 9.058174 TCAAAATTTTCTTACGTATCACCAAGA 57.942 29.630 0.00 0.00 0.00 3.02
132 133 9.672086 TTCAAAATTTTCTTACGTATCACCAAG 57.328 29.630 0.00 0.00 0.00 3.61
443 444 1.067565 GCACCTCTGTGATGTCGAGAA 60.068 52.381 0.00 0.00 45.76 2.87
444 445 0.528017 GCACCTCTGTGATGTCGAGA 59.472 55.000 0.00 0.00 45.76 4.04
445 446 0.799917 CGCACCTCTGTGATGTCGAG 60.800 60.000 0.00 0.00 45.76 4.04
446 447 1.212751 CGCACCTCTGTGATGTCGA 59.787 57.895 0.00 0.00 45.76 4.20
447 448 1.807165 CCGCACCTCTGTGATGTCG 60.807 63.158 0.00 0.00 45.76 4.35
448 449 2.103042 GCCGCACCTCTGTGATGTC 61.103 63.158 0.00 0.00 45.76 3.06
449 450 2.046892 GCCGCACCTCTGTGATGT 60.047 61.111 0.00 0.00 45.76 3.06
450 451 2.046988 TGCCGCACCTCTGTGATG 60.047 61.111 0.00 0.00 45.76 3.07
451 452 2.267006 CTGCCGCACCTCTGTGAT 59.733 61.111 0.00 0.00 45.76 3.06
452 453 4.007644 CCTGCCGCACCTCTGTGA 62.008 66.667 0.00 0.00 45.76 3.58
453 454 3.947132 CTCCTGCCGCACCTCTGTG 62.947 68.421 0.00 0.00 45.65 3.66
454 455 3.699894 CTCCTGCCGCACCTCTGT 61.700 66.667 0.00 0.00 0.00 3.41
455 456 2.290122 CTACTCCTGCCGCACCTCTG 62.290 65.000 0.00 0.00 0.00 3.35
456 457 2.037367 TACTCCTGCCGCACCTCT 59.963 61.111 0.00 0.00 0.00 3.69
457 458 1.035932 TACTACTCCTGCCGCACCTC 61.036 60.000 0.00 0.00 0.00 3.85
458 459 0.613853 TTACTACTCCTGCCGCACCT 60.614 55.000 0.00 0.00 0.00 4.00
459 460 0.248289 TTTACTACTCCTGCCGCACC 59.752 55.000 0.00 0.00 0.00 5.01
460 461 1.356938 GTTTACTACTCCTGCCGCAC 58.643 55.000 0.00 0.00 0.00 5.34
461 462 0.248289 GGTTTACTACTCCTGCCGCA 59.752 55.000 0.00 0.00 0.00 5.69
462 463 0.461516 GGGTTTACTACTCCTGCCGC 60.462 60.000 0.00 0.00 0.00 6.53
463 464 1.192428 AGGGTTTACTACTCCTGCCG 58.808 55.000 0.00 0.00 0.00 5.69
464 465 4.704965 CATTAGGGTTTACTACTCCTGCC 58.295 47.826 0.00 0.00 32.04 4.85
465 466 4.127907 GCATTAGGGTTTACTACTCCTGC 58.872 47.826 0.00 0.00 32.04 4.85
466 467 4.098960 TCGCATTAGGGTTTACTACTCCTG 59.901 45.833 0.00 0.00 32.04 3.86
467 468 4.284178 TCGCATTAGGGTTTACTACTCCT 58.716 43.478 0.00 0.00 33.60 3.69
468 469 4.501058 CCTCGCATTAGGGTTTACTACTCC 60.501 50.000 0.00 0.00 32.55 3.85
469 470 4.618965 CCTCGCATTAGGGTTTACTACTC 58.381 47.826 0.00 0.00 32.55 2.59
470 471 4.667519 CCTCGCATTAGGGTTTACTACT 57.332 45.455 0.00 0.00 32.55 2.57
480 481 1.418908 ATCCACCCCCTCGCATTAGG 61.419 60.000 0.00 0.00 36.30 2.69
481 482 1.348064 TATCCACCCCCTCGCATTAG 58.652 55.000 0.00 0.00 0.00 1.73
482 483 1.418637 GTTATCCACCCCCTCGCATTA 59.581 52.381 0.00 0.00 0.00 1.90
483 484 0.182775 GTTATCCACCCCCTCGCATT 59.817 55.000 0.00 0.00 0.00 3.56
484 485 1.705997 GGTTATCCACCCCCTCGCAT 61.706 60.000 0.00 0.00 40.19 4.73
485 486 2.372074 GGTTATCCACCCCCTCGCA 61.372 63.158 0.00 0.00 40.19 5.10
486 487 1.705997 ATGGTTATCCACCCCCTCGC 61.706 60.000 0.00 0.00 46.68 5.03
487 488 1.346722 GTATGGTTATCCACCCCCTCG 59.653 57.143 0.00 0.00 46.68 4.63
488 489 2.414612 TGTATGGTTATCCACCCCCTC 58.585 52.381 0.00 0.00 46.68 4.30
489 490 2.598288 TGTATGGTTATCCACCCCCT 57.402 50.000 0.00 0.00 46.68 4.79
490 491 3.895704 AATGTATGGTTATCCACCCCC 57.104 47.619 0.00 0.00 46.68 5.40
491 492 4.798882 TGAAATGTATGGTTATCCACCCC 58.201 43.478 0.00 0.00 46.68 4.95
492 493 6.068010 TCATGAAATGTATGGTTATCCACCC 58.932 40.000 0.00 0.00 45.15 4.61
493 494 7.581213 TTCATGAAATGTATGGTTATCCACC 57.419 36.000 5.45 0.00 45.63 4.61
504 505 5.541101 CACCCCATCCATTCATGAAATGTAT 59.459 40.000 13.09 1.69 46.80 2.29
505 506 4.894705 CACCCCATCCATTCATGAAATGTA 59.105 41.667 13.09 0.00 46.80 2.29
506 507 3.707611 CACCCCATCCATTCATGAAATGT 59.292 43.478 13.09 0.00 46.80 2.71
508 509 3.310805 ACCACCCCATCCATTCATGAAAT 60.311 43.478 13.09 0.00 0.00 2.17
509 510 2.044215 ACCACCCCATCCATTCATGAAA 59.956 45.455 13.09 0.00 0.00 2.69
510 511 1.645391 ACCACCCCATCCATTCATGAA 59.355 47.619 11.26 11.26 0.00 2.57
511 512 1.063792 CACCACCCCATCCATTCATGA 60.064 52.381 0.00 0.00 0.00 3.07
512 513 1.405872 CACCACCCCATCCATTCATG 58.594 55.000 0.00 0.00 0.00 3.07
513 514 0.397535 GCACCACCCCATCCATTCAT 60.398 55.000 0.00 0.00 0.00 2.57
514 515 1.000233 GCACCACCCCATCCATTCA 60.000 57.895 0.00 0.00 0.00 2.57
515 516 1.000233 TGCACCACCCCATCCATTC 60.000 57.895 0.00 0.00 0.00 2.67
516 517 1.305213 GTGCACCACCCCATCCATT 60.305 57.895 5.22 0.00 0.00 3.16
517 518 2.360191 GTGCACCACCCCATCCAT 59.640 61.111 5.22 0.00 0.00 3.41
518 519 4.343323 CGTGCACCACCCCATCCA 62.343 66.667 12.15 0.00 0.00 3.41
523 524 4.770874 ATACGCGTGCACCACCCC 62.771 66.667 24.59 0.00 0.00 4.95
524 525 3.192922 GATACGCGTGCACCACCC 61.193 66.667 24.59 0.00 0.00 4.61
525 526 1.570347 TTTGATACGCGTGCACCACC 61.570 55.000 24.59 0.00 0.00 4.61
526 527 0.236187 TTTTGATACGCGTGCACCAC 59.764 50.000 24.59 2.49 0.00 4.16
527 528 1.160989 ATTTTGATACGCGTGCACCA 58.839 45.000 24.59 11.17 0.00 4.17
528 529 1.910819 CAATTTTGATACGCGTGCACC 59.089 47.619 24.59 8.50 0.00 5.01
529 530 2.845486 TCAATTTTGATACGCGTGCAC 58.155 42.857 24.59 6.82 31.01 4.57
530 531 3.544356 TTCAATTTTGATACGCGTGCA 57.456 38.095 24.59 17.30 37.00 4.57
531 532 3.851403 ACATTCAATTTTGATACGCGTGC 59.149 39.130 24.59 14.61 37.00 5.34
532 533 4.851014 ACACATTCAATTTTGATACGCGTG 59.149 37.500 24.59 0.83 37.00 5.34
533 534 4.851014 CACACATTCAATTTTGATACGCGT 59.149 37.500 19.17 19.17 37.00 6.01
534 535 4.258977 GCACACATTCAATTTTGATACGCG 60.259 41.667 3.53 3.53 37.00 6.01
535 536 4.031652 GGCACACATTCAATTTTGATACGC 59.968 41.667 0.00 0.00 37.00 4.42
536 537 4.562394 GGGCACACATTCAATTTTGATACG 59.438 41.667 0.00 0.00 37.00 3.06
537 538 5.477510 TGGGCACACATTCAATTTTGATAC 58.522 37.500 0.00 0.00 37.00 2.24
538 539 5.735285 TGGGCACACATTCAATTTTGATA 57.265 34.783 0.00 0.00 37.00 2.15
539 540 4.620589 TGGGCACACATTCAATTTTGAT 57.379 36.364 0.00 0.00 37.00 2.57
540 541 4.316645 CATGGGCACACATTCAATTTTGA 58.683 39.130 0.00 0.00 34.92 2.69
541 542 3.120130 GCATGGGCACACATTCAATTTTG 60.120 43.478 0.00 0.00 40.72 2.44
542 543 3.075884 GCATGGGCACACATTCAATTTT 58.924 40.909 0.00 0.00 40.72 1.82
543 544 2.702261 GCATGGGCACACATTCAATTT 58.298 42.857 0.00 0.00 40.72 1.82
544 545 2.389962 GCATGGGCACACATTCAATT 57.610 45.000 0.00 0.00 40.72 2.32
556 557 0.746659 GGTCCAACTAATGCATGGGC 59.253 55.000 0.00 0.00 38.12 5.36
557 558 1.341877 TGGGTCCAACTAATGCATGGG 60.342 52.381 0.00 0.00 34.89 4.00
558 559 2.142356 TGGGTCCAACTAATGCATGG 57.858 50.000 0.00 0.00 35.49 3.66
559 560 3.289836 TGATGGGTCCAACTAATGCATG 58.710 45.455 0.00 0.00 0.00 4.06
560 561 3.668141 TGATGGGTCCAACTAATGCAT 57.332 42.857 0.00 0.00 0.00 3.96
561 562 3.668141 ATGATGGGTCCAACTAATGCA 57.332 42.857 0.00 0.00 0.00 3.96
562 563 6.096846 ACTTAAATGATGGGTCCAACTAATGC 59.903 38.462 0.00 0.00 0.00 3.56
563 564 7.483307 CACTTAAATGATGGGTCCAACTAATG 58.517 38.462 0.00 0.00 0.00 1.90
564 565 6.096846 GCACTTAAATGATGGGTCCAACTAAT 59.903 38.462 0.00 0.00 0.00 1.73
565 566 5.417580 GCACTTAAATGATGGGTCCAACTAA 59.582 40.000 0.00 0.00 0.00 2.24
566 567 4.947388 GCACTTAAATGATGGGTCCAACTA 59.053 41.667 0.00 0.00 0.00 2.24
567 568 3.763897 GCACTTAAATGATGGGTCCAACT 59.236 43.478 0.00 0.00 0.00 3.16
568 569 3.763897 AGCACTTAAATGATGGGTCCAAC 59.236 43.478 0.00 0.00 0.00 3.77
569 570 4.016444 GAGCACTTAAATGATGGGTCCAA 58.984 43.478 0.00 0.00 0.00 3.53
570 571 3.010027 TGAGCACTTAAATGATGGGTCCA 59.990 43.478 0.00 0.00 0.00 4.02
571 572 3.620488 TGAGCACTTAAATGATGGGTCC 58.380 45.455 0.00 0.00 0.00 4.46
572 573 5.841957 AATGAGCACTTAAATGATGGGTC 57.158 39.130 0.00 0.00 0.00 4.46
573 574 5.127682 GGAAATGAGCACTTAAATGATGGGT 59.872 40.000 0.00 0.00 0.00 4.51
574 575 5.452356 GGGAAATGAGCACTTAAATGATGGG 60.452 44.000 0.00 0.00 0.00 4.00
575 576 5.452356 GGGGAAATGAGCACTTAAATGATGG 60.452 44.000 0.00 0.00 0.00 3.51
576 577 5.127519 TGGGGAAATGAGCACTTAAATGATG 59.872 40.000 0.00 0.00 0.00 3.07
577 578 5.271598 TGGGGAAATGAGCACTTAAATGAT 58.728 37.500 0.00 0.00 0.00 2.45
578 579 4.671831 TGGGGAAATGAGCACTTAAATGA 58.328 39.130 0.00 0.00 0.00 2.57
579 580 5.404466 TTGGGGAAATGAGCACTTAAATG 57.596 39.130 0.00 0.00 0.00 2.32
580 581 6.625532 ATTTGGGGAAATGAGCACTTAAAT 57.374 33.333 0.00 0.00 0.00 1.40
581 582 6.229733 CAATTTGGGGAAATGAGCACTTAAA 58.770 36.000 0.00 0.00 0.00 1.52
582 583 5.792741 CAATTTGGGGAAATGAGCACTTAA 58.207 37.500 0.00 0.00 0.00 1.85
583 584 4.322650 GCAATTTGGGGAAATGAGCACTTA 60.323 41.667 0.00 0.00 0.00 2.24
584 585 3.557686 GCAATTTGGGGAAATGAGCACTT 60.558 43.478 0.00 0.00 0.00 3.16
585 586 2.027837 GCAATTTGGGGAAATGAGCACT 60.028 45.455 0.00 0.00 0.00 4.40
586 587 2.289569 TGCAATTTGGGGAAATGAGCAC 60.290 45.455 0.00 0.00 32.63 4.40
587 588 1.976404 TGCAATTTGGGGAAATGAGCA 59.024 42.857 0.00 0.00 34.09 4.26
588 589 2.289569 TGTGCAATTTGGGGAAATGAGC 60.290 45.455 0.00 0.00 0.00 4.26
589 590 3.681593 TGTGCAATTTGGGGAAATGAG 57.318 42.857 0.00 0.00 0.00 2.90
590 591 3.327172 ACATGTGCAATTTGGGGAAATGA 59.673 39.130 0.00 0.00 0.00 2.57
591 592 3.677190 ACATGTGCAATTTGGGGAAATG 58.323 40.909 0.00 0.00 0.00 2.32
592 593 4.370094 AACATGTGCAATTTGGGGAAAT 57.630 36.364 0.00 0.00 0.00 2.17
593 594 3.853355 AACATGTGCAATTTGGGGAAA 57.147 38.095 0.00 0.00 0.00 3.13
594 595 3.306641 GCTAACATGTGCAATTTGGGGAA 60.307 43.478 0.00 0.00 0.00 3.97
595 596 2.233431 GCTAACATGTGCAATTTGGGGA 59.767 45.455 0.00 0.00 0.00 4.81
596 597 2.234414 AGCTAACATGTGCAATTTGGGG 59.766 45.455 10.46 0.00 0.00 4.96
597 598 3.056678 TCAGCTAACATGTGCAATTTGGG 60.057 43.478 10.46 0.00 0.00 4.12
598 599 4.177165 TCAGCTAACATGTGCAATTTGG 57.823 40.909 10.46 0.00 0.00 3.28
599 600 6.528014 TTTTCAGCTAACATGTGCAATTTG 57.472 33.333 10.46 0.86 0.00 2.32
600 601 7.733402 AATTTTCAGCTAACATGTGCAATTT 57.267 28.000 10.46 0.00 0.00 1.82
601 602 7.733402 AAATTTTCAGCTAACATGTGCAATT 57.267 28.000 10.46 5.08 0.00 2.32
602 603 7.095102 GGAAAATTTTCAGCTAACATGTGCAAT 60.095 33.333 27.53 0.00 38.92 3.56
603 604 6.202570 GGAAAATTTTCAGCTAACATGTGCAA 59.797 34.615 27.53 0.00 38.92 4.08
604 605 5.695816 GGAAAATTTTCAGCTAACATGTGCA 59.304 36.000 27.53 0.00 38.92 4.57
605 606 5.164061 CGGAAAATTTTCAGCTAACATGTGC 60.164 40.000 27.53 0.00 38.92 4.57
606 607 6.088085 GTCGGAAAATTTTCAGCTAACATGTG 59.912 38.462 27.53 6.67 38.92 3.21
607 608 6.149633 GTCGGAAAATTTTCAGCTAACATGT 58.850 36.000 27.53 0.00 38.92 3.21
608 609 5.283717 CGTCGGAAAATTTTCAGCTAACATG 59.716 40.000 27.53 12.07 38.92 3.21
609 610 5.390613 CGTCGGAAAATTTTCAGCTAACAT 58.609 37.500 27.53 0.00 38.92 2.71
610 611 4.778904 CGTCGGAAAATTTTCAGCTAACA 58.221 39.130 27.53 8.81 38.92 2.41
611 612 3.602489 GCGTCGGAAAATTTTCAGCTAAC 59.398 43.478 27.53 17.88 38.92 2.34
612 613 3.500680 AGCGTCGGAAAATTTTCAGCTAA 59.499 39.130 27.53 9.45 38.92 3.09
613 614 3.071479 AGCGTCGGAAAATTTTCAGCTA 58.929 40.909 27.53 10.08 38.92 3.32
614 615 1.880027 AGCGTCGGAAAATTTTCAGCT 59.120 42.857 27.53 25.46 38.92 4.24
615 616 1.978782 CAGCGTCGGAAAATTTTCAGC 59.021 47.619 27.53 24.10 38.92 4.26
616 617 3.268013 ACAGCGTCGGAAAATTTTCAG 57.732 42.857 27.53 24.20 38.92 3.02
617 618 4.815040 TTACAGCGTCGGAAAATTTTCA 57.185 36.364 27.53 9.63 38.92 2.69
618 619 5.456173 TGTTTTACAGCGTCGGAAAATTTTC 59.544 36.000 20.51 20.51 36.46 2.29
619 620 5.230516 GTGTTTTACAGCGTCGGAAAATTTT 59.769 36.000 2.28 2.28 0.00 1.82
620 621 4.736307 GTGTTTTACAGCGTCGGAAAATTT 59.264 37.500 0.00 0.00 0.00 1.82
621 622 4.284485 GTGTTTTACAGCGTCGGAAAATT 58.716 39.130 0.00 0.00 0.00 1.82
622 623 3.605231 CGTGTTTTACAGCGTCGGAAAAT 60.605 43.478 0.00 0.00 0.00 1.82
623 624 2.285718 CGTGTTTTACAGCGTCGGAAAA 60.286 45.455 0.00 0.00 0.00 2.29
624 625 1.258458 CGTGTTTTACAGCGTCGGAAA 59.742 47.619 0.00 0.00 0.00 3.13
625 626 0.854062 CGTGTTTTACAGCGTCGGAA 59.146 50.000 0.00 0.00 0.00 4.30
626 627 1.550659 GCGTGTTTTACAGCGTCGGA 61.551 55.000 0.00 0.00 0.00 4.55
627 628 1.154727 GCGTGTTTTACAGCGTCGG 60.155 57.895 0.00 0.00 0.00 4.79
628 629 1.054574 TAGCGTGTTTTACAGCGTCG 58.945 50.000 0.00 0.00 35.15 5.12
629 630 3.717350 ATTAGCGTGTTTTACAGCGTC 57.283 42.857 0.00 0.00 35.15 5.19
630 631 5.594724 TTTATTAGCGTGTTTTACAGCGT 57.405 34.783 0.00 0.00 35.15 5.07
631 632 6.898451 TTTTTATTAGCGTGTTTTACAGCG 57.102 33.333 0.00 0.00 35.15 5.18
662 663 9.613957 CACACGTTTGGTTTGATATACATTTTA 57.386 29.630 0.00 0.00 0.00 1.52
663 664 7.115663 GCACACGTTTGGTTTGATATACATTTT 59.884 33.333 3.53 0.00 0.00 1.82
664 665 6.584563 GCACACGTTTGGTTTGATATACATTT 59.415 34.615 3.53 0.00 0.00 2.32
665 666 6.090129 GCACACGTTTGGTTTGATATACATT 58.910 36.000 3.53 0.00 0.00 2.71
666 667 5.636837 GCACACGTTTGGTTTGATATACAT 58.363 37.500 3.53 0.00 0.00 2.29
667 668 4.377533 CGCACACGTTTGGTTTGATATACA 60.378 41.667 3.53 0.00 33.53 2.29
668 669 4.085884 CGCACACGTTTGGTTTGATATAC 58.914 43.478 3.53 0.00 33.53 1.47
669 670 4.329296 CGCACACGTTTGGTTTGATATA 57.671 40.909 3.53 0.00 33.53 0.86
670 671 3.196007 CGCACACGTTTGGTTTGATAT 57.804 42.857 3.53 0.00 33.53 1.63
671 672 2.672188 CGCACACGTTTGGTTTGATA 57.328 45.000 3.53 0.00 33.53 2.15
672 673 3.542825 CGCACACGTTTGGTTTGAT 57.457 47.368 3.53 0.00 33.53 2.57
684 685 3.014036 CCACTCACACACGCACAC 58.986 61.111 0.00 0.00 0.00 3.82
685 686 2.867793 AAGCCACTCACACACGCACA 62.868 55.000 0.00 0.00 0.00 4.57
686 687 1.714899 AAAGCCACTCACACACGCAC 61.715 55.000 0.00 0.00 0.00 5.34
687 688 1.451207 AAAGCCACTCACACACGCA 60.451 52.632 0.00 0.00 0.00 5.24
688 689 1.009675 CAAAGCCACTCACACACGC 60.010 57.895 0.00 0.00 0.00 5.34
689 690 1.009675 GCAAAGCCACTCACACACG 60.010 57.895 0.00 0.00 0.00 4.49
690 691 1.009675 CGCAAAGCCACTCACACAC 60.010 57.895 0.00 0.00 0.00 3.82
691 692 2.833533 GCGCAAAGCCACTCACACA 61.834 57.895 0.30 0.00 40.81 3.72
692 693 2.050985 GCGCAAAGCCACTCACAC 60.051 61.111 0.30 0.00 40.81 3.82
708 709 2.045536 CAGGTTGGGAGCAGAGGC 60.046 66.667 0.00 0.00 41.61 4.70
709 710 0.401738 TTTCAGGTTGGGAGCAGAGG 59.598 55.000 0.00 0.00 0.00 3.69
710 711 1.072965 AGTTTCAGGTTGGGAGCAGAG 59.927 52.381 0.00 0.00 0.00 3.35
711 712 1.140312 AGTTTCAGGTTGGGAGCAGA 58.860 50.000 0.00 0.00 0.00 4.26
712 713 1.202806 TCAGTTTCAGGTTGGGAGCAG 60.203 52.381 0.00 0.00 0.00 4.24
713 714 0.843309 TCAGTTTCAGGTTGGGAGCA 59.157 50.000 0.00 0.00 0.00 4.26
714 715 1.981256 TTCAGTTTCAGGTTGGGAGC 58.019 50.000 0.00 0.00 0.00 4.70
715 716 3.954258 AGTTTTCAGTTTCAGGTTGGGAG 59.046 43.478 0.00 0.00 0.00 4.30
716 717 3.699038 CAGTTTTCAGTTTCAGGTTGGGA 59.301 43.478 0.00 0.00 0.00 4.37
717 718 3.699038 TCAGTTTTCAGTTTCAGGTTGGG 59.301 43.478 0.00 0.00 0.00 4.12
718 719 4.981806 TCAGTTTTCAGTTTCAGGTTGG 57.018 40.909 0.00 0.00 0.00 3.77
719 720 7.598493 TCTTTTTCAGTTTTCAGTTTCAGGTTG 59.402 33.333 0.00 0.00 0.00 3.77
720 721 7.666623 TCTTTTTCAGTTTTCAGTTTCAGGTT 58.333 30.769 0.00 0.00 0.00 3.50
721 722 7.176690 TCTCTTTTTCAGTTTTCAGTTTCAGGT 59.823 33.333 0.00 0.00 0.00 4.00
722 723 7.538575 TCTCTTTTTCAGTTTTCAGTTTCAGG 58.461 34.615 0.00 0.00 0.00 3.86
723 724 8.970691 TTCTCTTTTTCAGTTTTCAGTTTCAG 57.029 30.769 0.00 0.00 0.00 3.02
724 725 9.757227 TTTTCTCTTTTTCAGTTTTCAGTTTCA 57.243 25.926 0.00 0.00 0.00 2.69
751 752 7.144661 TGCGTATGTGAAATTCATCAGTTTTT 58.855 30.769 0.00 0.00 0.00 1.94
752 753 6.676950 TGCGTATGTGAAATTCATCAGTTTT 58.323 32.000 0.00 0.00 0.00 2.43
753 754 6.252967 TGCGTATGTGAAATTCATCAGTTT 57.747 33.333 0.00 0.00 0.00 2.66
754 755 5.878332 TGCGTATGTGAAATTCATCAGTT 57.122 34.783 0.00 0.00 0.00 3.16
755 756 5.878332 TTGCGTATGTGAAATTCATCAGT 57.122 34.783 0.00 0.00 0.00 3.41
756 757 6.488817 TGATTGCGTATGTGAAATTCATCAG 58.511 36.000 0.00 0.00 0.00 2.90
757 758 6.315891 TCTGATTGCGTATGTGAAATTCATCA 59.684 34.615 0.00 0.00 0.00 3.07
758 759 6.718388 TCTGATTGCGTATGTGAAATTCATC 58.282 36.000 0.00 0.00 0.00 2.92
759 760 6.682423 TCTGATTGCGTATGTGAAATTCAT 57.318 33.333 0.00 0.00 0.00 2.57
760 761 6.493449 TTCTGATTGCGTATGTGAAATTCA 57.507 33.333 0.00 0.00 0.00 2.57
761 762 7.697710 TCAATTCTGATTGCGTATGTGAAATTC 59.302 33.333 0.00 0.00 41.94 2.17
762 763 7.537715 TCAATTCTGATTGCGTATGTGAAATT 58.462 30.769 0.00 0.00 41.94 1.82
763 764 7.087409 TCAATTCTGATTGCGTATGTGAAAT 57.913 32.000 0.00 0.00 41.94 2.17
764 765 6.403527 CCTCAATTCTGATTGCGTATGTGAAA 60.404 38.462 0.00 0.00 41.94 2.69
765 766 5.065090 CCTCAATTCTGATTGCGTATGTGAA 59.935 40.000 0.00 0.00 41.94 3.18
766 767 4.571984 CCTCAATTCTGATTGCGTATGTGA 59.428 41.667 0.00 0.00 41.94 3.58
767 768 4.260907 CCCTCAATTCTGATTGCGTATGTG 60.261 45.833 0.00 0.00 41.94 3.21
768 769 3.879295 CCCTCAATTCTGATTGCGTATGT 59.121 43.478 0.00 0.00 41.94 2.29
769 770 3.251729 CCCCTCAATTCTGATTGCGTATG 59.748 47.826 0.00 0.00 41.94 2.39
772 773 1.004745 ACCCCTCAATTCTGATTGCGT 59.995 47.619 0.00 0.00 41.94 5.24
902 907 0.179001 ACAAACTTTGGGGAGGACGG 60.179 55.000 6.47 0.00 34.12 4.79
904 909 1.235724 CGACAAACTTTGGGGAGGAC 58.764 55.000 6.47 0.00 34.12 3.85
959 964 2.758089 GCGAACGGTAGGCGAGAGA 61.758 63.158 0.00 0.00 0.00 3.10
1085 1090 0.463295 CCTCCTACTCGTGCCTCGTA 60.463 60.000 0.00 0.00 40.80 3.43
1162 1167 0.179084 CTATCCGCTTCCTTTCGCCA 60.179 55.000 0.00 0.00 0.00 5.69
1183 1188 3.622514 GACCTGTCCATCGCCTCT 58.377 61.111 0.00 0.00 0.00 3.69
1321 1326 0.749649 GACAGAGCTCACCATCGGAT 59.250 55.000 17.77 0.00 0.00 4.18
1415 1420 5.289675 GGAGAACACAACTGATCTATGAACG 59.710 44.000 0.00 0.00 29.94 3.95
1502 1507 1.702957 CTAACCCCCACACTCCTGAAA 59.297 52.381 0.00 0.00 0.00 2.69
1505 1510 1.299976 GCTAACCCCCACACTCCTG 59.700 63.158 0.00 0.00 0.00 3.86
1542 1547 3.812609 TCGTGCACAAATACTGAACACAT 59.187 39.130 18.64 0.00 35.47 3.21
1549 1554 3.554524 CCTTGTTCGTGCACAAATACTG 58.445 45.455 18.64 0.00 36.22 2.74
1572 1577 4.570930 TGACAGTTGGACGCACAATTATA 58.429 39.130 0.00 0.00 32.24 0.98
1680 1685 3.003689 GGCAAGCATAATGATAAGTGCGT 59.996 43.478 0.00 0.00 42.18 5.24
1681 1686 3.251729 AGGCAAGCATAATGATAAGTGCG 59.748 43.478 0.00 0.00 42.18 5.34
1682 1687 4.843220 AGGCAAGCATAATGATAAGTGC 57.157 40.909 0.00 0.00 37.84 4.40
1683 1688 7.332926 CCTAGTAGGCAAGCATAATGATAAGTG 59.667 40.741 2.46 0.00 0.00 3.16
1684 1689 7.016661 ACCTAGTAGGCAAGCATAATGATAAGT 59.983 37.037 16.61 0.00 39.63 2.24
1686 1691 7.316393 ACCTAGTAGGCAAGCATAATGATAA 57.684 36.000 16.61 0.00 39.63 1.75
1687 1692 6.935240 ACCTAGTAGGCAAGCATAATGATA 57.065 37.500 16.61 0.00 39.63 2.15
1688 1693 5.832539 ACCTAGTAGGCAAGCATAATGAT 57.167 39.130 16.61 0.00 39.63 2.45
1690 1695 4.932200 GCTACCTAGTAGGCAAGCATAATG 59.068 45.833 27.61 2.50 43.45 1.90
1704 1709 1.104630 GCACCTTCGAGCTACCTAGT 58.895 55.000 0.00 0.00 0.00 2.57
1837 1843 1.614996 ACATTTTCATGTCGGCACCA 58.385 45.000 0.00 0.00 39.69 4.17
1944 1950 1.147557 GGTGTTGTTGTTGCTGCTGC 61.148 55.000 8.89 8.89 40.20 5.25
1947 1953 2.008752 AAAGGTGTTGTTGTTGCTGC 57.991 45.000 0.00 0.00 0.00 5.25
1950 1956 3.490249 GGGACTAAAGGTGTTGTTGTTGC 60.490 47.826 0.00 0.00 0.00 4.17
1960 2066 4.932146 CAACTTGTTTGGGACTAAAGGTG 58.068 43.478 0.00 0.00 0.00 4.00
2009 2115 1.067060 CCATGAGTTGGTCGCGAGATA 59.933 52.381 10.24 0.00 45.19 1.98
2041 2147 2.540515 GTGCGTAGAAGCTTGCTATCA 58.459 47.619 2.10 5.46 38.13 2.15
2055 2161 2.665089 CCATGGACAGGGGTGCGTA 61.665 63.158 5.56 0.00 38.35 4.42
2099 2205 6.380274 AGGTGTCCGTAAAGATAGATCTGAAA 59.620 38.462 5.18 0.00 37.19 2.69
2109 2215 1.946984 TGGGAGGTGTCCGTAAAGAT 58.053 50.000 0.00 0.00 45.05 2.40
2121 2233 0.324943 CCGAACTTGACATGGGAGGT 59.675 55.000 0.00 0.00 0.00 3.85
2174 2291 5.176590 GCGTAATATCAAGAAGCTCCAGAAG 59.823 44.000 0.00 0.00 0.00 2.85
2175 2292 5.050490 GCGTAATATCAAGAAGCTCCAGAA 58.950 41.667 0.00 0.00 0.00 3.02
2176 2293 4.501571 GGCGTAATATCAAGAAGCTCCAGA 60.502 45.833 0.00 0.00 0.00 3.86
2177 2294 3.743396 GGCGTAATATCAAGAAGCTCCAG 59.257 47.826 0.00 0.00 0.00 3.86
2178 2295 3.728845 GGCGTAATATCAAGAAGCTCCA 58.271 45.455 0.00 0.00 0.00 3.86
2179 2296 2.731976 CGGCGTAATATCAAGAAGCTCC 59.268 50.000 0.00 0.00 0.00 4.70
2180 2297 3.381949 ACGGCGTAATATCAAGAAGCTC 58.618 45.455 12.58 0.00 0.00 4.09
2181 2298 3.381949 GACGGCGTAATATCAAGAAGCT 58.618 45.455 14.74 0.00 0.00 3.74
2182 2299 2.475487 GGACGGCGTAATATCAAGAAGC 59.525 50.000 14.74 0.00 0.00 3.86
2183 2300 3.489785 GTGGACGGCGTAATATCAAGAAG 59.510 47.826 14.74 0.00 0.00 2.85
2184 2301 3.131577 AGTGGACGGCGTAATATCAAGAA 59.868 43.478 14.74 0.00 0.00 2.52
2185 2302 2.691526 AGTGGACGGCGTAATATCAAGA 59.308 45.455 14.74 0.00 0.00 3.02
2186 2303 3.093717 AGTGGACGGCGTAATATCAAG 57.906 47.619 14.74 0.00 0.00 3.02
2187 2304 4.552355 CATAGTGGACGGCGTAATATCAA 58.448 43.478 14.74 0.00 0.00 2.57
2188 2305 3.613193 GCATAGTGGACGGCGTAATATCA 60.613 47.826 14.74 3.89 0.00 2.15
2189 2306 2.921754 GCATAGTGGACGGCGTAATATC 59.078 50.000 14.74 0.00 0.00 1.63
2190 2307 2.297880 TGCATAGTGGACGGCGTAATAT 59.702 45.455 14.74 4.52 0.00 1.28
2191 2308 1.682323 TGCATAGTGGACGGCGTAATA 59.318 47.619 14.74 1.68 0.00 0.98
2192 2309 0.462375 TGCATAGTGGACGGCGTAAT 59.538 50.000 14.74 0.00 0.00 1.89
2195 2312 2.125673 GTGCATAGTGGACGGCGT 60.126 61.111 14.65 14.65 0.00 5.68
2196 2313 2.890474 GGTGCATAGTGGACGGCG 60.890 66.667 4.80 4.80 39.79 6.46
2227 2344 2.639327 GGGCAAATTCAGCGCAGGT 61.639 57.895 11.47 0.00 43.54 4.00
2240 2357 2.041485 TCATCTGAGATGGTTTGGGCAA 59.959 45.455 21.27 0.00 0.00 4.52
2264 2381 4.461781 CCAATTGAAGAGAAGCTTGTCCAT 59.538 41.667 19.26 9.40 36.83 3.41
2299 2416 9.174166 TCCGAAATGATGATATACGAGATAGAA 57.826 33.333 0.00 0.00 0.00 2.10
2362 2486 2.896854 TGGCGGAGATGCGAATGC 60.897 61.111 0.00 0.00 43.20 3.56
2366 2490 4.451150 GGTGTGGCGGAGATGCGA 62.451 66.667 0.00 0.00 35.06 5.10
2444 2568 1.168407 TCTATAGGACGGCGGTTCGG 61.168 60.000 13.24 0.00 0.00 4.30
2469 2593 3.954258 AGAGTGCCACAAAAGCTAAAAGT 59.046 39.130 0.00 0.00 0.00 2.66
2509 2635 3.390639 TGGATGAAGTGGCACCAAAATTT 59.609 39.130 15.27 0.00 0.00 1.82
2512 2638 2.079170 TGGATGAAGTGGCACCAAAA 57.921 45.000 15.27 0.00 0.00 2.44
2513 2639 2.170166 GATGGATGAAGTGGCACCAAA 58.830 47.619 15.27 0.00 34.28 3.28
2518 2644 1.224315 CCGGATGGATGAAGTGGCA 59.776 57.895 0.00 0.00 37.49 4.92
2584 2710 6.098124 CCTTTCAATATTTGGGGTCAATGCTA 59.902 38.462 0.00 0.00 32.28 3.49
2655 2781 5.163581 GGTTTCAGTACTATTAGGCACGAGA 60.164 44.000 0.00 0.00 0.00 4.04
2666 2795 5.163405 ACATGAGATGCGGTTTCAGTACTAT 60.163 40.000 0.00 0.00 0.00 2.12
2683 2812 4.529377 AGAACTAAAACCGGGTACATGAGA 59.471 41.667 6.32 0.00 0.00 3.27
2709 2838 9.947433 TTGGAATCGAAAGGTTTTAGACTTATA 57.053 29.630 0.00 0.00 32.13 0.98
2710 2839 8.857694 TTGGAATCGAAAGGTTTTAGACTTAT 57.142 30.769 0.00 0.00 32.13 1.73
2767 2897 1.891011 CGATGATAGTCGGATGGGGGA 60.891 57.143 0.00 0.00 37.94 4.81
2826 2956 8.598041 GTCACAAGGGATATACAAGGAGATATT 58.402 37.037 0.00 0.00 0.00 1.28
2856 2986 4.320608 TCTTTTTGCTTTGGTGATGGAC 57.679 40.909 0.00 0.00 0.00 4.02
2883 3014 1.073923 CACCAGGGGTCAGCTTTAAGT 59.926 52.381 0.00 0.00 31.02 2.24
2886 3017 1.906574 CTACACCAGGGGTCAGCTTTA 59.093 52.381 0.00 0.00 31.02 1.85
2907 3038 7.067008 ACTGATGACTTCCCAATTAAAATACGG 59.933 37.037 0.00 0.00 0.00 4.02
2909 3040 8.739972 ACACTGATGACTTCCCAATTAAAATAC 58.260 33.333 0.00 0.00 0.00 1.89
2919 3050 0.037326 GCGACACTGATGACTTCCCA 60.037 55.000 0.00 0.00 0.00 4.37
2938 3069 4.997565 ACAAGTGTTCAAACAAGTGATGG 58.002 39.130 11.82 0.00 41.21 3.51
3028 3159 3.493176 CCGCAGAATATCATGTGGTGAGA 60.493 47.826 10.25 0.00 41.27 3.27
3030 3161 2.837498 CCGCAGAATATCATGTGGTGA 58.163 47.619 10.25 0.00 41.27 4.02
3041 3172 6.183360 GGCCTATGATAAGATACCGCAGAATA 60.183 42.308 0.00 0.00 0.00 1.75
3046 3177 3.441101 AGGCCTATGATAAGATACCGCA 58.559 45.455 1.29 0.00 0.00 5.69
3093 3224 6.486657 GGTGCTATGATAAGATACCAAGCAAA 59.513 38.462 0.00 0.00 40.12 3.68
3094 3225 5.997746 GGTGCTATGATAAGATACCAAGCAA 59.002 40.000 0.00 0.00 40.12 3.91
3095 3226 5.307976 AGGTGCTATGATAAGATACCAAGCA 59.692 40.000 0.00 0.00 36.45 3.91
3096 3227 5.799213 AGGTGCTATGATAAGATACCAAGC 58.201 41.667 0.00 0.00 31.36 4.01
3097 3228 8.682936 AAAAGGTGCTATGATAAGATACCAAG 57.317 34.615 0.00 0.00 31.36 3.61
3098 3229 9.778741 CTAAAAGGTGCTATGATAAGATACCAA 57.221 33.333 0.00 0.00 31.36 3.67
3099 3230 9.154632 TCTAAAAGGTGCTATGATAAGATACCA 57.845 33.333 0.00 0.00 31.36 3.25
3100 3231 9.998106 TTCTAAAAGGTGCTATGATAAGATACC 57.002 33.333 0.00 0.00 0.00 2.73
3103 3234 9.771534 GTCTTCTAAAAGGTGCTATGATAAGAT 57.228 33.333 0.00 0.00 33.03 2.40
3104 3235 8.982723 AGTCTTCTAAAAGGTGCTATGATAAGA 58.017 33.333 0.00 0.00 33.03 2.10
3105 3236 9.039870 CAGTCTTCTAAAAGGTGCTATGATAAG 57.960 37.037 0.00 0.00 33.03 1.73
3106 3237 8.540388 ACAGTCTTCTAAAAGGTGCTATGATAA 58.460 33.333 0.00 0.00 33.03 1.75
3107 3238 8.079211 ACAGTCTTCTAAAAGGTGCTATGATA 57.921 34.615 0.00 0.00 33.03 2.15
3108 3239 6.951971 ACAGTCTTCTAAAAGGTGCTATGAT 58.048 36.000 0.00 0.00 33.03 2.45
3109 3240 6.360370 ACAGTCTTCTAAAAGGTGCTATGA 57.640 37.500 0.00 0.00 33.03 2.15
3110 3241 7.440523 AAACAGTCTTCTAAAAGGTGCTATG 57.559 36.000 0.00 0.00 33.03 2.23
3111 3242 7.095187 CGAAAACAGTCTTCTAAAAGGTGCTAT 60.095 37.037 0.00 0.00 33.03 2.97
3112 3243 6.202188 CGAAAACAGTCTTCTAAAAGGTGCTA 59.798 38.462 0.00 0.00 33.03 3.49
3206 3338 3.572632 ACCAATCTGATCCACATGAGG 57.427 47.619 2.20 2.20 0.00 3.86
3207 3339 4.053983 CGTACCAATCTGATCCACATGAG 58.946 47.826 0.00 0.00 0.00 2.90
3209 3341 3.804325 GTCGTACCAATCTGATCCACATG 59.196 47.826 0.00 0.00 0.00 3.21
3215 3347 5.100259 TCTTTTCGTCGTACCAATCTGATC 58.900 41.667 0.00 0.00 0.00 2.92
3226 3358 7.624764 GCATTCCCTTTTTATCTTTTCGTCGTA 60.625 37.037 0.00 0.00 0.00 3.43
3268 3400 6.142320 GCAAAGAAGGTAAGTGATTTGAAACG 59.858 38.462 0.00 0.00 31.01 3.60
3290 3422 5.945191 TGTTCAATTGATATGAGTCAGGCAA 59.055 36.000 9.40 3.40 0.00 4.52
3307 3439 6.360370 TTTCTAGTAGTCAGCCTGTTCAAT 57.640 37.500 0.00 0.00 0.00 2.57
3347 3479 9.900710 AGTTATTCTATAAGAGCAACAGATACG 57.099 33.333 0.00 0.00 0.00 3.06
3465 3598 2.650813 GATGAGGGCGGCTGTACAGG 62.651 65.000 23.95 9.71 0.00 4.00
3467 3600 2.900273 GATGAGGGCGGCTGTACA 59.100 61.111 9.56 0.00 0.00 2.90
3471 3604 2.892425 GAACGATGAGGGCGGCTG 60.892 66.667 9.56 0.00 0.00 4.85
3554 3688 4.011023 TCTCAGTCAGTTAGTGCTACCTC 58.989 47.826 0.00 0.00 0.00 3.85
3570 3704 2.766828 GTGTAAGTGCCCCTATCTCAGT 59.233 50.000 0.00 0.00 0.00 3.41
3587 3721 3.028850 GGTACCCACAGCTATCAGTGTA 58.971 50.000 0.00 0.00 33.99 2.90
3590 3724 2.552093 AGGTACCCACAGCTATCAGT 57.448 50.000 8.74 0.00 0.00 3.41
3597 3731 2.731572 TCTACAGTAGGTACCCACAGC 58.268 52.381 13.22 0.00 0.00 4.40
3609 3743 6.939730 CCTCATCTCTAGCTTCATCTACAGTA 59.060 42.308 0.00 0.00 0.00 2.74
3640 3774 1.228245 ACGGATGCAGTGCAGGTTT 60.228 52.632 24.20 6.27 43.65 3.27
3643 3777 2.520465 TACCACGGATGCAGTGCAGG 62.520 60.000 24.20 19.96 43.65 4.85
3662 3796 2.501316 GCCAAGGCCAAACTCCATAAAT 59.499 45.455 5.01 0.00 34.56 1.40
3758 3901 5.774690 AGAAAAACATGGTGGCAGAGAATAA 59.225 36.000 0.00 0.00 0.00 1.40
3871 4014 5.791994 CAGTATCTGATTCTCCTGTAAGGCG 60.792 48.000 0.00 0.00 44.24 5.52
3888 4031 7.560991 AGATCTGATTCTTCACTGTCAGTATCT 59.439 37.037 4.85 3.68 39.22 1.98
4269 4412 1.843851 CCAGGGCATAGTAAACAGGGA 59.156 52.381 0.00 0.00 0.00 4.20
4272 4415 1.680338 GGCCAGGGCATAGTAAACAG 58.320 55.000 13.10 0.00 44.11 3.16
4316 4459 1.331214 CCCAAAAAGCTCAGCTCCAA 58.669 50.000 0.00 0.00 38.25 3.53
4489 4632 3.843027 ACAGATTCAGGTGTTCTCCATCT 59.157 43.478 0.00 0.00 33.66 2.90
4514 4660 4.807834 CACTTCTAGATATGGCCATATGCG 59.192 45.833 37.31 24.66 42.61 4.73
4568 4714 1.075601 AAGGCATGTCTCCTTTGGGA 58.924 50.000 0.00 0.00 40.87 4.37
4577 4723 5.023533 TCGCTTCTAATTAAGGCATGTCT 57.976 39.130 0.00 0.00 0.00 3.41
4582 4728 6.751514 TGATTTTCGCTTCTAATTAAGGCA 57.248 33.333 0.00 0.00 0.00 4.75
4605 4751 2.122099 ACTCCACCTCCCCGGTTT 60.122 61.111 0.00 0.00 46.37 3.27
4620 4766 0.108585 ACGCCAACAAGGTCATGACT 59.891 50.000 24.50 8.73 40.61 3.41
4643 4789 2.111999 CTCTTCTGGGGGTGCAACGA 62.112 60.000 0.00 0.00 38.12 3.85
4721 4867 3.320541 TGACCATAACTTGCTTGGTTTGG 59.679 43.478 0.00 3.45 43.67 3.28
4742 4898 7.818930 AGAAGTGGTGGCAAATTTAATGTATTG 59.181 33.333 0.00 0.00 0.00 1.90
4906 5063 7.572861 AGACCTCCCTAACAATATGAAACCTAT 59.427 37.037 0.00 0.00 0.00 2.57
4950 5107 3.398967 AGAATGCATGATAGCCCCCTTTA 59.601 43.478 0.00 0.00 0.00 1.85
5012 5169 7.991084 TGTAAGAGCACTGTACTAGAAAGTA 57.009 36.000 0.00 0.00 37.15 2.24
5025 5182 9.890629 TCAGTAAATCATATTTGTAAGAGCACT 57.109 29.630 0.00 0.00 0.00 4.40
5203 5360 7.889469 ACCGTCAGAAGACAACTTATTAGTAA 58.111 34.615 0.00 0.00 45.23 2.24
5255 5412 8.692110 TGCACAAAAATAAGATGAGCAAATAG 57.308 30.769 0.00 0.00 37.64 1.73
5490 5649 3.072944 GGAGATCAGCATGTAGGCATTC 58.927 50.000 0.00 0.00 37.40 2.67
5502 5661 5.537300 TTATCTACCAACAGGAGATCAGC 57.463 43.478 0.00 0.00 32.27 4.26
5532 5691 5.853936 TGACTGTAAAGTATGCTGACACTT 58.146 37.500 0.00 0.00 36.56 3.16
6048 6226 1.651138 GACGAATCAGACAACTCTGCG 59.349 52.381 0.00 0.00 43.45 5.18
6064 6242 4.214327 TGCTGTGTGGTGCGACGA 62.214 61.111 0.00 0.00 0.00 4.20
6071 6249 0.535102 GCTTGGTAGTGCTGTGTGGT 60.535 55.000 0.00 0.00 0.00 4.16
6084 6262 0.399454 ACACAGATGAGCAGCTTGGT 59.601 50.000 0.00 0.00 0.00 3.67
6110 6288 4.386711 ACTGAACCAAGTACTAAACTGCC 58.613 43.478 0.00 0.00 38.88 4.85
6120 6298 4.164604 ACAGGTAACCAACTGAACCAAGTA 59.835 41.667 0.00 0.00 38.09 2.24
6141 6319 1.144276 TCGGTTTCGTGAAGCCACA 59.856 52.632 14.61 0.00 43.34 4.17
6171 6350 1.198713 GCAGGACAAGGGAGATCAGA 58.801 55.000 0.00 0.00 0.00 3.27
6321 6504 6.408858 AAAATACACAGCAGAGACATAACG 57.591 37.500 0.00 0.00 0.00 3.18
6417 6600 7.988028 GGTTACAGGTGAAGAATAAGAATAGCT 59.012 37.037 0.00 0.00 0.00 3.32
6439 6622 2.301870 ACTTTCCATGCAGACTCGGTTA 59.698 45.455 0.00 0.00 0.00 2.85
6443 6626 3.125316 GGTAAACTTTCCATGCAGACTCG 59.875 47.826 0.00 0.00 0.00 4.18
6448 6631 2.890311 TGTGGGTAAACTTTCCATGCAG 59.110 45.455 0.00 0.00 32.71 4.41
6451 6634 5.782893 TTTCTGTGGGTAAACTTTCCATG 57.217 39.130 0.00 0.00 32.71 3.66
6479 6662 1.202336 GCCATGACAGCACATAAAGGC 60.202 52.381 0.00 0.00 32.59 4.35
6583 6766 2.614259 AGGGAGCTATGTTCATCGGAT 58.386 47.619 0.00 0.00 0.00 4.18
6594 6777 2.237392 ACTCTTCGCAAAAGGGAGCTAT 59.763 45.455 2.84 0.00 0.00 2.97
6626 6809 4.104383 AGAAAGATGCTTTCAAGACCCA 57.896 40.909 18.75 0.00 0.00 4.51
6635 6818 3.552890 GCGTGGGAAAAGAAAGATGCTTT 60.553 43.478 0.00 0.00 37.18 3.51
6637 6820 1.541588 GCGTGGGAAAAGAAAGATGCT 59.458 47.619 0.00 0.00 0.00 3.79
6638 6821 1.541588 AGCGTGGGAAAAGAAAGATGC 59.458 47.619 0.00 0.00 0.00 3.91
6641 6824 2.878406 CAGAAGCGTGGGAAAAGAAAGA 59.122 45.455 0.00 0.00 0.00 2.52
6644 6827 0.951558 GCAGAAGCGTGGGAAAAGAA 59.048 50.000 0.00 0.00 0.00 2.52
6645 6828 0.179032 TGCAGAAGCGTGGGAAAAGA 60.179 50.000 0.00 0.00 46.23 2.52
6646 6829 0.883833 ATGCAGAAGCGTGGGAAAAG 59.116 50.000 0.00 0.00 46.23 2.27
6653 6836 1.806542 ACAACCTTATGCAGAAGCGTG 59.193 47.619 15.69 16.06 46.23 5.34
6654 6837 2.185004 ACAACCTTATGCAGAAGCGT 57.815 45.000 15.69 11.74 46.23 5.07
6656 6839 3.255642 TGGAAACAACCTTATGCAGAAGC 59.744 43.478 15.69 0.02 37.44 3.86
6672 6907 2.614983 TCTAACAACGCCACTTGGAAAC 59.385 45.455 0.00 0.00 37.39 2.78
6673 6908 2.920524 TCTAACAACGCCACTTGGAAA 58.079 42.857 0.00 0.00 37.39 3.13
6674 6909 2.623878 TCTAACAACGCCACTTGGAA 57.376 45.000 0.00 0.00 37.39 3.53
6675 6910 2.037902 TGATCTAACAACGCCACTTGGA 59.962 45.455 0.00 0.00 37.39 3.53
6682 6980 1.128692 GTGTGCTGATCTAACAACGCC 59.871 52.381 0.00 0.00 0.00 5.68
6683 6981 1.201812 CGTGTGCTGATCTAACAACGC 60.202 52.381 0.00 0.00 0.00 4.84
6693 6991 2.283298 CCTGCTTTATCGTGTGCTGAT 58.717 47.619 0.00 0.00 0.00 2.90
6702 7005 2.839486 TATCCCTGCCTGCTTTATCG 57.161 50.000 0.00 0.00 0.00 2.92
6745 7048 5.698741 ATGGACACAATACTCAGGAATCA 57.301 39.130 0.00 0.00 0.00 2.57
6772 7075 5.065988 TCGCCAAGAATTTTATAAGTCAGGC 59.934 40.000 14.93 14.93 42.86 4.85
6781 7084 4.200092 GAGGGTCTCGCCAAGAATTTTAT 58.800 43.478 0.00 0.00 39.65 1.40
6785 7088 0.984230 TGAGGGTCTCGCCAAGAATT 59.016 50.000 0.00 0.00 39.65 2.17
6813 7116 2.196595 TGACCACTCTAATCCTTGGGG 58.803 52.381 0.00 0.00 33.00 4.96
6814 7117 3.455910 TCATGACCACTCTAATCCTTGGG 59.544 47.826 0.00 0.00 33.00 4.12
6859 7163 9.947433 TTAACGGGACTTCAAATCTTAGAAATA 57.053 29.630 0.00 0.00 0.00 1.40
6867 7171 3.007182 TCGGTTAACGGGACTTCAAATCT 59.993 43.478 12.65 0.00 44.45 2.40
6884 7188 2.882170 GCCAAGGGCTTATTCGGTT 58.118 52.632 0.00 0.00 46.69 4.44
6900 7204 0.733150 GGCCTTGTGTTTATCTCGCC 59.267 55.000 0.00 0.00 0.00 5.54
6905 7209 1.745653 GCTCCTGGCCTTGTGTTTATC 59.254 52.381 3.32 0.00 34.27 1.75
6921 7225 3.303132 CGCACTTCCGTTAATATTGCTCC 60.303 47.826 0.00 0.00 0.00 4.70
6932 7236 3.242543 CGTACTATAGACGCACTTCCGTT 60.243 47.826 6.78 0.00 42.24 4.44
6963 7267 6.524101 TTGTTGGTTCTCACTTAGCTTTTT 57.476 33.333 0.00 0.00 0.00 1.94
6965 7269 5.417580 TGTTTGTTGGTTCTCACTTAGCTTT 59.582 36.000 0.00 0.00 0.00 3.51
6966 7270 4.947388 TGTTTGTTGGTTCTCACTTAGCTT 59.053 37.500 0.00 0.00 0.00 3.74
6999 7306 4.298626 TGCTGGATCTAACCTTAGGTGAT 58.701 43.478 3.99 4.10 35.34 3.06
7029 7337 1.677052 AGATCCGTAGCGTCTTCTTCC 59.323 52.381 0.00 0.00 0.00 3.46
7125 7433 2.203280 CGTGCCAAGTCCAACCCA 60.203 61.111 0.00 0.00 0.00 4.51
7128 7436 0.321653 AGATCCGTGCCAAGTCCAAC 60.322 55.000 0.00 0.00 0.00 3.77
7268 7576 1.007734 GTGTTGTCGCTGACGGAGA 60.008 57.895 4.65 0.00 40.63 3.71
7283 7591 1.183549 GGTCATACTGGAGGACGTGT 58.816 55.000 0.00 0.00 39.86 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.