Multiple sequence alignment - TraesCS2B01G405300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G405300 chr2B 100.000 7109 0 0 1 7109 573213334 573206226 0.000000e+00 13128.0
1 TraesCS2B01G405300 chr2B 95.619 776 33 1 6335 7109 774081957 774082732 0.000000e+00 1243.0
2 TraesCS2B01G405300 chr2B 84.150 347 46 5 3346 3686 573209530 573209187 1.910000e-85 327.0
3 TraesCS2B01G405300 chr2B 84.150 347 46 5 3805 4148 573209989 573209649 1.910000e-85 327.0
4 TraesCS2B01G405300 chr2D 94.120 5408 209 59 966 6338 489650350 489645017 0.000000e+00 8124.0
5 TraesCS2B01G405300 chr2D 89.712 2294 178 26 3316 5600 439691486 439689242 0.000000e+00 2876.0
6 TraesCS2B01G405300 chr2D 87.287 2289 204 54 1029 3279 439693726 439691487 0.000000e+00 2534.0
7 TraesCS2B01G405300 chr2D 89.276 373 17 9 160 519 489650708 489650346 5.060000e-121 446.0
8 TraesCS2B01G405300 chr2D 85.014 347 46 4 3346 3686 489647536 489647190 1.470000e-91 348.0
9 TraesCS2B01G405300 chr2D 84.503 342 45 6 3352 3686 439690991 439690651 1.480000e-86 331.0
10 TraesCS2B01G405300 chr2D 84.024 338 43 8 3815 4148 439691446 439691116 1.490000e-81 315.0
11 TraesCS2B01G405300 chr2D 96.296 162 6 0 4 165 489652495 489652334 4.230000e-67 267.0
12 TraesCS2B01G405300 chr2D 93.333 60 4 0 3050 3109 489648202 489648143 9.820000e-14 89.8
13 TraesCS2B01G405300 chr2A 93.988 5256 212 53 965 6184 633245563 633240376 0.000000e+00 7860.0
14 TraesCS2B01G405300 chr2A 88.129 775 88 3 6337 7107 608262193 608261419 0.000000e+00 918.0
15 TraesCS2B01G405300 chr2A 98.881 447 5 0 520 966 205129690 205130136 0.000000e+00 798.0
16 TraesCS2B01G405300 chr2A 87.032 347 36 2 3805 4148 633243208 633242868 4.020000e-102 383.0
17 TraesCS2B01G405300 chr2A 85.014 347 46 3 3346 3686 633242749 633242403 1.470000e-91 348.0
18 TraesCS2B01G405300 chr2A 95.385 130 6 0 6170 6299 633240357 633240228 2.600000e-49 207.0
19 TraesCS2B01G405300 chr2A 79.464 224 14 17 309 514 633245773 633245564 5.790000e-26 130.0
20 TraesCS2B01G405300 chr2A 96.429 56 2 0 3050 3105 633243415 633243360 7.590000e-15 93.5
21 TraesCS2B01G405300 chr1B 91.864 762 61 1 6348 7109 327029029 327029789 0.000000e+00 1062.0
22 TraesCS2B01G405300 chr7A 88.243 774 87 4 6338 7109 518520688 518521459 0.000000e+00 922.0
23 TraesCS2B01G405300 chr6D 87.726 774 91 4 6338 7109 463166063 463166834 0.000000e+00 900.0
24 TraesCS2B01G405300 chr6D 87.609 460 46 3 520 968 91576075 91576534 2.270000e-144 523.0
25 TraesCS2B01G405300 chr7D 86.788 772 99 3 6338 7107 270156299 270155529 0.000000e+00 857.0
26 TraesCS2B01G405300 chr7D 93.304 224 14 1 5779 6002 457193482 457193260 5.320000e-86 329.0
27 TraesCS2B01G405300 chr3D 86.693 774 99 4 6338 7109 461383076 461383847 0.000000e+00 856.0
28 TraesCS2B01G405300 chr5A 86.991 761 91 5 6349 7104 495029046 495029803 0.000000e+00 850.0
29 TraesCS2B01G405300 chr4D 86.452 775 102 3 6337 7109 149218534 149219307 0.000000e+00 846.0
30 TraesCS2B01G405300 chr1A 79.675 246 42 7 726 966 37678563 37678805 3.410000e-38 171.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G405300 chr2B 573206226 573213334 7108 True 13128.000000 13128 100.0000 1 7109 1 chr2B.!!$R1 7108
1 TraesCS2B01G405300 chr2B 774081957 774082732 775 False 1243.000000 1243 95.6190 6335 7109 1 chr2B.!!$F1 774
2 TraesCS2B01G405300 chr2B 573209187 573209989 802 True 327.000000 327 84.1500 3346 4148 2 chr2B.!!$R2 802
3 TraesCS2B01G405300 chr2D 489645017 489652495 7478 True 1854.960000 8124 91.6078 4 6338 5 chr2D.!!$R2 6334
4 TraesCS2B01G405300 chr2D 439689242 439693726 4484 True 1514.000000 2876 86.3815 1029 5600 4 chr2D.!!$R1 4571
5 TraesCS2B01G405300 chr2A 633240228 633245773 5545 True 1503.583333 7860 89.5520 309 6299 6 chr2A.!!$R2 5990
6 TraesCS2B01G405300 chr2A 608261419 608262193 774 True 918.000000 918 88.1290 6337 7107 1 chr2A.!!$R1 770
7 TraesCS2B01G405300 chr1B 327029029 327029789 760 False 1062.000000 1062 91.8640 6348 7109 1 chr1B.!!$F1 761
8 TraesCS2B01G405300 chr7A 518520688 518521459 771 False 922.000000 922 88.2430 6338 7109 1 chr7A.!!$F1 771
9 TraesCS2B01G405300 chr6D 463166063 463166834 771 False 900.000000 900 87.7260 6338 7109 1 chr6D.!!$F2 771
10 TraesCS2B01G405300 chr7D 270155529 270156299 770 True 857.000000 857 86.7880 6338 7107 1 chr7D.!!$R1 769
11 TraesCS2B01G405300 chr3D 461383076 461383847 771 False 856.000000 856 86.6930 6338 7109 1 chr3D.!!$F1 771
12 TraesCS2B01G405300 chr5A 495029046 495029803 757 False 850.000000 850 86.9910 6349 7104 1 chr5A.!!$F1 755
13 TraesCS2B01G405300 chr4D 149218534 149219307 773 False 846.000000 846 86.4520 6337 7109 1 chr4D.!!$F1 772

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
642 2303 0.109132 CCATCGAAAAAGCTGCCCAC 60.109 55.000 0.00 0.0 0.00 4.61 F
901 2562 0.109532 TGGCACCAATCCAAACGAGA 59.890 50.000 0.00 0.0 0.00 4.04 F
1618 3283 0.179045 GCATACCGGGTGCTGAATCT 60.179 55.000 22.36 0.0 39.45 2.40 F
2581 4268 1.278127 GGTTAGCCTTGTGCCTGTCTA 59.722 52.381 0.00 0.0 42.71 2.59 F
3315 5037 0.245266 TGCTACGGAGATTGCAACGA 59.755 50.000 13.35 0.0 32.12 3.85 F
4787 6512 0.107831 TGGTGACAGTGTACAAGGGC 59.892 55.000 0.00 0.0 35.01 5.19 F
5318 7047 0.805614 TGTTGTTTCCACACCACACG 59.194 50.000 0.00 0.0 30.32 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1618 3283 1.159285 CCGTCAAGCAAATGCAGAGA 58.841 50.000 8.28 0.00 45.16 3.10 R
1772 3444 1.714794 ATCAGAACAAGCCTCGTTCG 58.285 50.000 5.22 2.18 45.93 3.95 R
3014 4732 1.207329 GATACTGGGGTTGACTCGCTT 59.793 52.381 0.00 0.00 0.00 4.68 R
4183 5908 0.539051 AGCCGTTTCATCCTCAGGAG 59.461 55.000 0.00 0.00 34.05 3.69 R
5084 6812 0.250640 ACCTGCACTGCTTCCTCAAG 60.251 55.000 1.98 0.00 0.00 3.02 R
5612 7344 0.110644 CAGACACGCGGAGAAAAAGC 60.111 55.000 12.47 0.00 0.00 3.51 R
6314 8079 0.608130 TGCGACCACTGAGTAGCATT 59.392 50.000 6.36 0.00 42.41 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 2.860735 CGAGGGAAGTTGCTTAGAATCG 59.139 50.000 0.00 0.00 0.00 3.34
42 43 5.070685 AGGGAAGTTGCTTAGAATCGTTTT 58.929 37.500 0.00 0.00 0.00 2.43
65 66 5.030147 TGGTCTAGATGGTCCAAAGTACAT 58.970 41.667 0.00 0.00 0.00 2.29
98 99 6.939730 TGGTCTGCTTATTTTGTGTTCTATCA 59.060 34.615 0.00 0.00 0.00 2.15
140 141 4.564782 ATCCCTATGTGCATGTATCCTG 57.435 45.455 0.00 0.00 0.00 3.86
161 162 5.582665 CCTGTAGATGAAACTTGTAAGCCTC 59.417 44.000 0.00 0.00 0.00 4.70
167 1799 8.870075 AGATGAAACTTGTAAGCCTCTTATTT 57.130 30.769 0.00 0.00 0.00 1.40
190 1822 1.067250 GCTTTTGGCTTGCACCGAA 59.933 52.632 0.00 0.00 38.06 4.30
196 1828 0.383949 TGGCTTGCACCGAAAACTTC 59.616 50.000 0.00 0.00 0.00 3.01
203 1835 5.107875 GCTTGCACCGAAAACTTCTAAATTG 60.108 40.000 0.00 0.00 0.00 2.32
215 1847 7.391148 AACTTCTAAATTGTATGGATGCGTT 57.609 32.000 0.00 0.00 0.00 4.84
217 1849 6.374333 ACTTCTAAATTGTATGGATGCGTTGT 59.626 34.615 0.00 0.00 0.00 3.32
223 1855 1.064060 GTATGGATGCGTTGTCTTGGC 59.936 52.381 0.00 0.00 0.00 4.52
241 1873 4.545208 TGGCTTTAATAAAAGTTGGGGC 57.455 40.909 0.36 0.00 43.44 5.80
244 1876 4.503910 GCTTTAATAAAAGTTGGGGCAGG 58.496 43.478 0.36 0.00 43.44 4.85
245 1877 4.622933 GCTTTAATAAAAGTTGGGGCAGGG 60.623 45.833 0.36 0.00 43.44 4.45
303 1945 8.434392 AGACACTACACTTTCACCCTATTTTTA 58.566 33.333 0.00 0.00 0.00 1.52
304 1946 8.983702 ACACTACACTTTCACCCTATTTTTAA 57.016 30.769 0.00 0.00 0.00 1.52
305 1947 9.411189 ACACTACACTTTCACCCTATTTTTAAA 57.589 29.630 0.00 0.00 0.00 1.52
378 2020 9.583765 GGGCACCGTATGTTTATAAATTTTAAA 57.416 29.630 0.31 0.00 40.86 1.52
474 2128 1.558294 GTCGAACTACCCCCATTCCTT 59.442 52.381 0.00 0.00 0.00 3.36
475 2129 2.026542 GTCGAACTACCCCCATTCCTTT 60.027 50.000 0.00 0.00 0.00 3.11
526 2187 2.212327 CCGAAGGCTCTGGGTATGT 58.788 57.895 0.00 0.00 46.14 2.29
527 2188 0.541863 CCGAAGGCTCTGGGTATGTT 59.458 55.000 0.00 0.00 46.14 2.71
528 2189 1.065418 CCGAAGGCTCTGGGTATGTTT 60.065 52.381 0.00 0.00 46.14 2.83
529 2190 2.009774 CGAAGGCTCTGGGTATGTTTG 58.990 52.381 0.00 0.00 0.00 2.93
530 2191 2.369394 GAAGGCTCTGGGTATGTTTGG 58.631 52.381 0.00 0.00 0.00 3.28
531 2192 1.372501 AGGCTCTGGGTATGTTTGGT 58.627 50.000 0.00 0.00 0.00 3.67
532 2193 1.710809 AGGCTCTGGGTATGTTTGGTT 59.289 47.619 0.00 0.00 0.00 3.67
533 2194 2.110011 AGGCTCTGGGTATGTTTGGTTT 59.890 45.455 0.00 0.00 0.00 3.27
534 2195 3.332485 AGGCTCTGGGTATGTTTGGTTTA 59.668 43.478 0.00 0.00 0.00 2.01
535 2196 4.083565 GGCTCTGGGTATGTTTGGTTTAA 58.916 43.478 0.00 0.00 0.00 1.52
536 2197 4.157840 GGCTCTGGGTATGTTTGGTTTAAG 59.842 45.833 0.00 0.00 0.00 1.85
537 2198 4.380550 GCTCTGGGTATGTTTGGTTTAAGC 60.381 45.833 0.00 0.00 0.00 3.09
538 2199 4.083565 TCTGGGTATGTTTGGTTTAAGCC 58.916 43.478 0.54 0.54 0.00 4.35
539 2200 3.166679 TGGGTATGTTTGGTTTAAGCCC 58.833 45.455 5.83 0.00 0.00 5.19
540 2201 2.498481 GGGTATGTTTGGTTTAAGCCCC 59.502 50.000 5.83 0.00 0.00 5.80
541 2202 3.166679 GGTATGTTTGGTTTAAGCCCCA 58.833 45.455 5.83 0.75 0.00 4.96
542 2203 3.194755 GGTATGTTTGGTTTAAGCCCCAG 59.805 47.826 5.83 0.00 31.04 4.45
543 2204 1.710816 TGTTTGGTTTAAGCCCCAGG 58.289 50.000 5.83 0.00 31.04 4.45
544 2205 1.062810 TGTTTGGTTTAAGCCCCAGGT 60.063 47.619 5.83 0.00 31.04 4.00
545 2206 2.043992 GTTTGGTTTAAGCCCCAGGTT 58.956 47.619 5.83 0.00 37.50 3.50
546 2207 1.710816 TTGGTTTAAGCCCCAGGTTG 58.289 50.000 5.83 0.00 34.89 3.77
547 2208 0.830023 TGGTTTAAGCCCCAGGTTGC 60.830 55.000 5.83 0.00 34.89 4.17
548 2209 1.541310 GGTTTAAGCCCCAGGTTGCC 61.541 60.000 0.00 0.00 34.89 4.52
549 2210 0.830023 GTTTAAGCCCCAGGTTGCCA 60.830 55.000 0.00 0.00 34.89 4.92
550 2211 0.830023 TTTAAGCCCCAGGTTGCCAC 60.830 55.000 0.00 0.00 34.89 5.01
551 2212 2.012824 TTAAGCCCCAGGTTGCCACA 62.013 55.000 0.00 0.00 34.89 4.17
552 2213 2.706952 TAAGCCCCAGGTTGCCACAC 62.707 60.000 0.00 0.00 34.89 3.82
554 2215 4.217210 CCCCAGGTTGCCACACCA 62.217 66.667 0.09 0.00 39.62 4.17
555 2216 2.123511 CCCAGGTTGCCACACCAA 60.124 61.111 0.09 0.00 39.62 3.67
556 2217 1.760086 CCCAGGTTGCCACACCAAA 60.760 57.895 0.09 0.00 39.62 3.28
557 2218 1.333636 CCCAGGTTGCCACACCAAAA 61.334 55.000 0.09 0.00 39.62 2.44
558 2219 0.758123 CCAGGTTGCCACACCAAAAT 59.242 50.000 0.09 0.00 39.62 1.82
559 2220 1.140652 CCAGGTTGCCACACCAAAATT 59.859 47.619 0.09 0.00 39.62 1.82
560 2221 2.421248 CCAGGTTGCCACACCAAAATTT 60.421 45.455 0.09 0.00 39.62 1.82
561 2222 3.277715 CAGGTTGCCACACCAAAATTTT 58.722 40.909 0.00 0.00 39.62 1.82
562 2223 3.065095 CAGGTTGCCACACCAAAATTTTG 59.935 43.478 21.65 21.65 39.62 2.44
582 2243 3.290948 GGTATAACCAATGTCAGGGCA 57.709 47.619 0.00 0.00 38.42 5.36
583 2244 3.832527 GGTATAACCAATGTCAGGGCAT 58.167 45.455 0.00 0.00 38.42 4.40
584 2245 3.569701 GGTATAACCAATGTCAGGGCATG 59.430 47.826 0.00 0.00 38.42 4.06
585 2246 3.668141 ATAACCAATGTCAGGGCATGA 57.332 42.857 0.00 0.00 34.79 3.07
596 2257 4.005487 TCAGGGCATGACCAAAATTTTG 57.995 40.909 22.78 21.65 42.05 2.44
597 2258 3.645212 TCAGGGCATGACCAAAATTTTGA 59.355 39.130 28.44 10.10 42.05 2.69
598 2259 4.286549 TCAGGGCATGACCAAAATTTTGAT 59.713 37.500 28.44 15.21 42.05 2.57
599 2260 5.483231 TCAGGGCATGACCAAAATTTTGATA 59.517 36.000 28.44 15.75 42.05 2.15
600 2261 6.013898 TCAGGGCATGACCAAAATTTTGATAA 60.014 34.615 28.44 8.71 42.05 1.75
601 2262 6.314400 CAGGGCATGACCAAAATTTTGATAAG 59.686 38.462 28.44 15.77 42.05 1.73
602 2263 5.065090 GGGCATGACCAAAATTTTGATAAGC 59.935 40.000 28.44 22.53 42.05 3.09
603 2264 5.642919 GGCATGACCAAAATTTTGATAAGCA 59.357 36.000 28.44 18.34 40.55 3.91
604 2265 6.149142 GGCATGACCAAAATTTTGATAAGCAA 59.851 34.615 28.44 9.77 40.55 3.91
605 2266 7.148205 GGCATGACCAAAATTTTGATAAGCAAT 60.148 33.333 28.44 11.31 40.55 3.56
606 2267 8.238631 GCATGACCAAAATTTTGATAAGCAATT 58.761 29.630 28.44 5.87 40.55 2.32
607 2268 9.763465 CATGACCAAAATTTTGATAAGCAATTC 57.237 29.630 28.44 12.09 40.55 2.17
608 2269 9.729281 ATGACCAAAATTTTGATAAGCAATTCT 57.271 25.926 28.44 5.03 40.55 2.40
609 2270 9.558396 TGACCAAAATTTTGATAAGCAATTCTT 57.442 25.926 28.44 0.00 40.55 2.52
623 2284 9.971922 ATAAGCAATTCTTATTTGGATTGTAGC 57.028 29.630 0.00 0.00 43.58 3.58
624 2285 6.809869 AGCAATTCTTATTTGGATTGTAGCC 58.190 36.000 0.00 0.00 0.00 3.93
625 2286 6.380846 AGCAATTCTTATTTGGATTGTAGCCA 59.619 34.615 0.00 0.00 0.00 4.75
626 2287 7.070322 AGCAATTCTTATTTGGATTGTAGCCAT 59.930 33.333 0.00 0.00 34.90 4.40
627 2288 7.383300 GCAATTCTTATTTGGATTGTAGCCATC 59.617 37.037 0.00 0.00 34.90 3.51
628 2289 6.618287 TTCTTATTTGGATTGTAGCCATCG 57.382 37.500 0.00 0.00 34.90 3.84
629 2290 5.924356 TCTTATTTGGATTGTAGCCATCGA 58.076 37.500 0.00 0.00 34.90 3.59
630 2291 6.353323 TCTTATTTGGATTGTAGCCATCGAA 58.647 36.000 0.00 0.00 34.90 3.71
631 2292 6.826231 TCTTATTTGGATTGTAGCCATCGAAA 59.174 34.615 0.00 0.00 34.90 3.46
632 2293 5.913137 ATTTGGATTGTAGCCATCGAAAA 57.087 34.783 0.00 0.00 34.90 2.29
633 2294 5.713792 TTTGGATTGTAGCCATCGAAAAA 57.286 34.783 0.00 0.00 34.90 1.94
634 2295 4.963276 TGGATTGTAGCCATCGAAAAAG 57.037 40.909 0.00 0.00 0.00 2.27
635 2296 3.128589 TGGATTGTAGCCATCGAAAAAGC 59.871 43.478 0.00 0.00 0.00 3.51
636 2297 3.378427 GGATTGTAGCCATCGAAAAAGCT 59.622 43.478 6.99 6.99 39.37 3.74
637 2298 3.829886 TTGTAGCCATCGAAAAAGCTG 57.170 42.857 10.89 0.00 36.79 4.24
638 2299 1.468520 TGTAGCCATCGAAAAAGCTGC 59.531 47.619 10.89 10.12 38.30 5.25
639 2300 1.094785 TAGCCATCGAAAAAGCTGCC 58.905 50.000 10.89 0.00 36.79 4.85
640 2301 1.153765 GCCATCGAAAAAGCTGCCC 60.154 57.895 0.00 0.00 0.00 5.36
641 2302 1.876497 GCCATCGAAAAAGCTGCCCA 61.876 55.000 0.00 0.00 0.00 5.36
642 2303 0.109132 CCATCGAAAAAGCTGCCCAC 60.109 55.000 0.00 0.00 0.00 4.61
643 2304 0.597568 CATCGAAAAAGCTGCCCACA 59.402 50.000 0.00 0.00 0.00 4.17
644 2305 1.000385 CATCGAAAAAGCTGCCCACAA 60.000 47.619 0.00 0.00 0.00 3.33
645 2306 1.107114 TCGAAAAAGCTGCCCACAAA 58.893 45.000 0.00 0.00 0.00 2.83
646 2307 1.686052 TCGAAAAAGCTGCCCACAAAT 59.314 42.857 0.00 0.00 0.00 2.32
647 2308 1.794116 CGAAAAAGCTGCCCACAAATG 59.206 47.619 0.00 0.00 0.00 2.32
648 2309 1.532437 GAAAAAGCTGCCCACAAATGC 59.468 47.619 0.00 0.00 0.00 3.56
649 2310 0.469070 AAAAGCTGCCCACAAATGCA 59.531 45.000 0.00 0.00 35.86 3.96
650 2311 0.249996 AAAGCTGCCCACAAATGCAC 60.250 50.000 0.00 0.00 33.17 4.57
651 2312 1.401318 AAGCTGCCCACAAATGCACA 61.401 50.000 0.00 0.00 33.17 4.57
652 2313 1.189524 AGCTGCCCACAAATGCACAT 61.190 50.000 0.00 0.00 33.17 3.21
653 2314 1.017177 GCTGCCCACAAATGCACATG 61.017 55.000 0.00 0.00 33.17 3.21
654 2315 1.004799 TGCCCACAAATGCACATGC 60.005 52.632 0.00 0.00 42.50 4.06
666 2327 1.750351 GCACATGCATGCTAATCGTG 58.250 50.000 26.53 15.69 42.62 4.35
671 2332 1.566563 GCATGCTAATCGTGCGAGG 59.433 57.895 11.37 0.00 46.47 4.63
672 2333 1.835483 GCATGCTAATCGTGCGAGGG 61.835 60.000 11.37 0.00 46.47 4.30
673 2334 1.595382 ATGCTAATCGTGCGAGGGC 60.595 57.895 0.00 5.13 40.52 5.19
674 2335 2.967615 GCTAATCGTGCGAGGGCC 60.968 66.667 0.00 0.00 38.85 5.80
675 2336 2.280186 CTAATCGTGCGAGGGCCC 60.280 66.667 16.46 16.46 38.85 5.80
676 2337 3.078196 TAATCGTGCGAGGGCCCA 61.078 61.111 27.56 0.00 38.85 5.36
677 2338 3.379865 TAATCGTGCGAGGGCCCAC 62.380 63.158 27.56 18.56 38.85 4.61
680 2341 4.077184 CGTGCGAGGGCCCACTAA 62.077 66.667 27.56 5.46 38.85 2.24
681 2342 2.125106 GTGCGAGGGCCCACTAAG 60.125 66.667 27.56 11.12 38.85 2.18
682 2343 2.606519 TGCGAGGGCCCACTAAGT 60.607 61.111 27.56 0.00 38.85 2.24
683 2344 1.305465 TGCGAGGGCCCACTAAGTA 60.305 57.895 27.56 6.61 38.85 2.24
684 2345 0.905809 TGCGAGGGCCCACTAAGTAA 60.906 55.000 27.56 0.00 38.85 2.24
685 2346 0.461516 GCGAGGGCCCACTAAGTAAC 60.462 60.000 27.56 2.38 0.00 2.50
686 2347 1.192428 CGAGGGCCCACTAAGTAACT 58.808 55.000 27.56 0.00 0.00 2.24
687 2348 2.381911 CGAGGGCCCACTAAGTAACTA 58.618 52.381 27.56 0.00 0.00 2.24
688 2349 2.963782 CGAGGGCCCACTAAGTAACTAT 59.036 50.000 27.56 0.00 0.00 2.12
689 2350 3.005578 CGAGGGCCCACTAAGTAACTATC 59.994 52.174 27.56 6.66 0.00 2.08
690 2351 2.963782 AGGGCCCACTAAGTAACTATCG 59.036 50.000 27.56 0.00 0.00 2.92
691 2352 2.036862 GGGCCCACTAAGTAACTATCGG 59.963 54.545 19.95 0.00 0.00 4.18
692 2353 2.961062 GGCCCACTAAGTAACTATCGGA 59.039 50.000 0.00 0.00 0.00 4.55
693 2354 3.243670 GGCCCACTAAGTAACTATCGGAC 60.244 52.174 0.00 0.00 0.00 4.79
694 2355 3.382546 GCCCACTAAGTAACTATCGGACA 59.617 47.826 0.00 0.00 0.00 4.02
695 2356 4.142093 GCCCACTAAGTAACTATCGGACAA 60.142 45.833 0.00 0.00 0.00 3.18
696 2357 5.625197 GCCCACTAAGTAACTATCGGACAAA 60.625 44.000 0.00 0.00 0.00 2.83
697 2358 6.040878 CCCACTAAGTAACTATCGGACAAAG 58.959 44.000 0.00 0.00 0.00 2.77
698 2359 6.127535 CCCACTAAGTAACTATCGGACAAAGA 60.128 42.308 0.00 0.00 0.00 2.52
699 2360 7.318141 CCACTAAGTAACTATCGGACAAAGAA 58.682 38.462 0.00 0.00 0.00 2.52
700 2361 7.980099 CCACTAAGTAACTATCGGACAAAGAAT 59.020 37.037 0.00 0.00 0.00 2.40
701 2362 9.367444 CACTAAGTAACTATCGGACAAAGAATT 57.633 33.333 0.00 0.00 0.00 2.17
702 2363 9.939802 ACTAAGTAACTATCGGACAAAGAATTT 57.060 29.630 0.00 0.00 40.26 1.82
715 2376 3.582714 AAGAATTTGCAGCCTAGTTGC 57.417 42.857 8.99 8.99 40.12 4.17
719 2380 3.594568 TGCAGCCTAGTTGCATGC 58.405 55.556 11.82 11.82 44.16 4.06
720 2381 1.303480 TGCAGCCTAGTTGCATGCA 60.303 52.632 18.46 18.46 44.16 3.96
721 2382 1.138247 GCAGCCTAGTTGCATGCAC 59.862 57.895 22.58 15.59 39.50 4.57
722 2383 1.805254 CAGCCTAGTTGCATGCACC 59.195 57.895 22.58 14.82 0.00 5.01
723 2384 0.961857 CAGCCTAGTTGCATGCACCA 60.962 55.000 22.58 3.29 0.00 4.17
724 2385 0.962356 AGCCTAGTTGCATGCACCAC 60.962 55.000 22.58 17.39 0.00 4.16
725 2386 1.243342 GCCTAGTTGCATGCACCACA 61.243 55.000 22.58 1.91 0.00 4.17
726 2387 0.806868 CCTAGTTGCATGCACCACAG 59.193 55.000 22.58 14.39 0.00 3.66
727 2388 1.527034 CTAGTTGCATGCACCACAGT 58.473 50.000 22.58 11.37 0.00 3.55
728 2389 2.615240 CCTAGTTGCATGCACCACAGTA 60.615 50.000 22.58 11.95 0.00 2.74
729 2390 1.979855 AGTTGCATGCACCACAGTAA 58.020 45.000 22.58 0.00 0.00 2.24
730 2391 2.517959 AGTTGCATGCACCACAGTAAT 58.482 42.857 22.58 0.00 0.00 1.89
731 2392 3.684908 AGTTGCATGCACCACAGTAATA 58.315 40.909 22.58 0.00 0.00 0.98
732 2393 4.078537 AGTTGCATGCACCACAGTAATAA 58.921 39.130 22.58 0.00 0.00 1.40
733 2394 4.522405 AGTTGCATGCACCACAGTAATAAA 59.478 37.500 22.58 0.00 0.00 1.40
734 2395 5.010516 AGTTGCATGCACCACAGTAATAAAA 59.989 36.000 22.58 0.00 0.00 1.52
735 2396 5.459536 TGCATGCACCACAGTAATAAAAA 57.540 34.783 18.46 0.00 0.00 1.94
757 2418 5.342361 AAAATAAAACTACCTGGGACCCA 57.658 39.130 14.08 14.08 0.00 4.51
758 2419 4.311520 AATAAAACTACCTGGGACCCAC 57.688 45.455 9.95 0.00 0.00 4.61
759 2420 0.775542 AAAACTACCTGGGACCCACC 59.224 55.000 9.95 0.00 38.08 4.61
760 2421 0.402272 AAACTACCTGGGACCCACCA 60.402 55.000 9.95 0.00 41.20 4.17
761 2422 0.402272 AACTACCTGGGACCCACCAA 60.402 55.000 9.95 0.00 40.68 3.67
762 2423 0.840722 ACTACCTGGGACCCACCAAG 60.841 60.000 9.95 9.31 40.68 3.61
763 2424 0.546747 CTACCTGGGACCCACCAAGA 60.547 60.000 9.95 0.00 42.20 3.02
764 2425 0.838987 TACCTGGGACCCACCAAGAC 60.839 60.000 9.95 0.00 42.20 3.01
765 2426 2.153401 CCTGGGACCCACCAAGACA 61.153 63.158 9.95 0.00 42.20 3.41
766 2427 1.376466 CTGGGACCCACCAAGACAG 59.624 63.158 9.95 0.00 42.20 3.51
767 2428 1.074090 TGGGACCCACCAAGACAGA 60.074 57.895 9.95 0.00 41.20 3.41
768 2429 1.127567 TGGGACCCACCAAGACAGAG 61.128 60.000 9.95 0.00 41.20 3.35
769 2430 0.836400 GGGACCCACCAAGACAGAGA 60.836 60.000 5.33 0.00 41.20 3.10
770 2431 0.610687 GGACCCACCAAGACAGAGAG 59.389 60.000 0.00 0.00 38.79 3.20
771 2432 0.610687 GACCCACCAAGACAGAGAGG 59.389 60.000 0.00 0.00 0.00 3.69
772 2433 0.838122 ACCCACCAAGACAGAGAGGG 60.838 60.000 0.00 0.00 40.66 4.30
773 2434 1.298014 CCACCAAGACAGAGAGGGC 59.702 63.158 0.00 0.00 0.00 5.19
774 2435 1.483595 CCACCAAGACAGAGAGGGCA 61.484 60.000 0.00 0.00 0.00 5.36
775 2436 0.397941 CACCAAGACAGAGAGGGCAA 59.602 55.000 0.00 0.00 0.00 4.52
776 2437 1.140312 ACCAAGACAGAGAGGGCAAA 58.860 50.000 0.00 0.00 0.00 3.68
777 2438 1.494721 ACCAAGACAGAGAGGGCAAAA 59.505 47.619 0.00 0.00 0.00 2.44
778 2439 2.157738 CCAAGACAGAGAGGGCAAAAG 58.842 52.381 0.00 0.00 0.00 2.27
779 2440 2.157738 CAAGACAGAGAGGGCAAAAGG 58.842 52.381 0.00 0.00 0.00 3.11
780 2441 1.439543 AGACAGAGAGGGCAAAAGGT 58.560 50.000 0.00 0.00 0.00 3.50
781 2442 1.072965 AGACAGAGAGGGCAAAAGGTG 59.927 52.381 0.00 0.00 0.00 4.00
789 2450 4.359475 GCAAAAGGTGCGCCAATT 57.641 50.000 20.59 10.39 45.10 2.32
790 2451 2.615774 GCAAAAGGTGCGCCAATTT 58.384 47.368 20.59 15.99 45.10 1.82
791 2452 0.943673 GCAAAAGGTGCGCCAATTTT 59.056 45.000 20.59 14.34 45.10 1.82
792 2453 1.333308 GCAAAAGGTGCGCCAATTTTT 59.667 42.857 20.59 13.60 45.10 1.94
814 2475 3.453679 GGAGCTTCTCCGCGTCCT 61.454 66.667 4.92 0.00 41.08 3.85
815 2476 2.103340 GAGCTTCTCCGCGTCCTC 59.897 66.667 4.92 0.00 34.40 3.71
816 2477 2.676822 AGCTTCTCCGCGTCCTCA 60.677 61.111 4.92 0.00 34.40 3.86
817 2478 2.202676 GCTTCTCCGCGTCCTCAG 60.203 66.667 4.92 0.00 0.00 3.35
818 2479 2.202676 CTTCTCCGCGTCCTCAGC 60.203 66.667 4.92 0.00 0.00 4.26
819 2480 2.676822 TTCTCCGCGTCCTCAGCT 60.677 61.111 4.92 0.00 0.00 4.24
820 2481 2.606155 CTTCTCCGCGTCCTCAGCTC 62.606 65.000 4.92 0.00 0.00 4.09
821 2482 4.544689 CTCCGCGTCCTCAGCTCG 62.545 72.222 4.92 0.00 0.00 5.03
825 2486 4.742201 GCGTCCTCAGCTCGCCAA 62.742 66.667 5.49 0.00 43.41 4.52
826 2487 2.811317 CGTCCTCAGCTCGCCAAC 60.811 66.667 0.00 0.00 0.00 3.77
827 2488 2.659610 GTCCTCAGCTCGCCAACT 59.340 61.111 0.00 0.00 0.00 3.16
828 2489 1.446966 GTCCTCAGCTCGCCAACTC 60.447 63.158 0.00 0.00 0.00 3.01
829 2490 2.507992 CCTCAGCTCGCCAACTCG 60.508 66.667 0.00 0.00 0.00 4.18
830 2491 2.259818 CTCAGCTCGCCAACTCGT 59.740 61.111 0.00 0.00 0.00 4.18
831 2492 1.373497 CTCAGCTCGCCAACTCGTT 60.373 57.895 0.00 0.00 0.00 3.85
832 2493 1.621301 CTCAGCTCGCCAACTCGTTG 61.621 60.000 2.86 2.86 40.13 4.10
844 2505 3.971150 CAACTCGTTGGCCAAAATTACA 58.029 40.909 22.47 0.00 36.95 2.41
845 2506 3.636282 ACTCGTTGGCCAAAATTACAC 57.364 42.857 22.47 5.44 0.00 2.90
846 2507 2.952978 ACTCGTTGGCCAAAATTACACA 59.047 40.909 22.47 0.00 0.00 3.72
847 2508 3.572255 ACTCGTTGGCCAAAATTACACAT 59.428 39.130 22.47 0.00 0.00 3.21
848 2509 3.906998 TCGTTGGCCAAAATTACACATG 58.093 40.909 22.47 0.00 0.00 3.21
849 2510 2.411409 CGTTGGCCAAAATTACACATGC 59.589 45.455 22.47 1.61 0.00 4.06
850 2511 2.360553 TGGCCAAAATTACACATGCG 57.639 45.000 0.61 0.00 0.00 4.73
851 2512 1.889170 TGGCCAAAATTACACATGCGA 59.111 42.857 0.61 0.00 0.00 5.10
852 2513 2.495270 TGGCCAAAATTACACATGCGAT 59.505 40.909 0.61 0.00 0.00 4.58
853 2514 3.056250 TGGCCAAAATTACACATGCGATT 60.056 39.130 0.61 0.00 0.00 3.34
854 2515 3.306703 GGCCAAAATTACACATGCGATTG 59.693 43.478 0.00 0.00 0.00 2.67
855 2516 3.306703 GCCAAAATTACACATGCGATTGG 59.693 43.478 0.00 0.00 39.20 3.16
856 2517 3.306703 CCAAAATTACACATGCGATTGGC 59.693 43.478 0.00 0.00 43.96 4.52
879 2540 3.560278 CCGTTAGCGCGCCGATTT 61.560 61.111 30.33 11.88 36.67 2.17
880 2541 2.398036 CGTTAGCGCGCCGATTTT 59.602 55.556 30.33 11.01 0.00 1.82
881 2542 1.225908 CGTTAGCGCGCCGATTTTT 60.226 52.632 30.33 10.14 0.00 1.94
898 2559 3.976339 TTTGGCACCAATCCAAACG 57.024 47.368 2.31 0.00 45.60 3.60
899 2560 1.403814 TTTGGCACCAATCCAAACGA 58.596 45.000 2.31 0.00 45.60 3.85
900 2561 0.958091 TTGGCACCAATCCAAACGAG 59.042 50.000 0.00 0.00 40.35 4.18
901 2562 0.109532 TGGCACCAATCCAAACGAGA 59.890 50.000 0.00 0.00 0.00 4.04
902 2563 0.521735 GGCACCAATCCAAACGAGAC 59.478 55.000 0.00 0.00 0.00 3.36
903 2564 0.521735 GCACCAATCCAAACGAGACC 59.478 55.000 0.00 0.00 0.00 3.85
904 2565 1.165270 CACCAATCCAAACGAGACCC 58.835 55.000 0.00 0.00 0.00 4.46
905 2566 0.768622 ACCAATCCAAACGAGACCCA 59.231 50.000 0.00 0.00 0.00 4.51
906 2567 1.144093 ACCAATCCAAACGAGACCCAA 59.856 47.619 0.00 0.00 0.00 4.12
907 2568 2.235016 CCAATCCAAACGAGACCCAAA 58.765 47.619 0.00 0.00 0.00 3.28
908 2569 2.228822 CCAATCCAAACGAGACCCAAAG 59.771 50.000 0.00 0.00 0.00 2.77
909 2570 2.884639 CAATCCAAACGAGACCCAAAGT 59.115 45.455 0.00 0.00 0.00 2.66
910 2571 2.249844 TCCAAACGAGACCCAAAGTC 57.750 50.000 0.00 0.00 46.71 3.01
921 2582 1.662044 CCAAAGTCTGTGGGCAAGC 59.338 57.895 0.31 0.00 32.03 4.01
922 2583 1.662044 CAAAGTCTGTGGGCAAGCC 59.338 57.895 1.52 1.52 0.00 4.35
923 2584 1.108727 CAAAGTCTGTGGGCAAGCCA 61.109 55.000 13.87 0.00 37.98 4.75
924 2585 0.396974 AAAGTCTGTGGGCAAGCCAA 60.397 50.000 13.87 0.00 37.98 4.52
925 2586 0.396974 AAGTCTGTGGGCAAGCCAAA 60.397 50.000 13.87 0.00 37.98 3.28
926 2587 0.396974 AGTCTGTGGGCAAGCCAAAA 60.397 50.000 13.87 0.00 37.98 2.44
927 2588 0.681175 GTCTGTGGGCAAGCCAAAAT 59.319 50.000 13.87 0.00 37.98 1.82
928 2589 1.070601 GTCTGTGGGCAAGCCAAAATT 59.929 47.619 13.87 0.00 37.98 1.82
929 2590 1.767681 TCTGTGGGCAAGCCAAAATTT 59.232 42.857 13.87 0.00 37.98 1.82
930 2591 2.172293 TCTGTGGGCAAGCCAAAATTTT 59.828 40.909 13.87 0.00 37.98 1.82
931 2592 2.291190 CTGTGGGCAAGCCAAAATTTTG 59.709 45.455 21.65 21.65 37.98 2.44
948 2609 7.680442 AAATTTTGGTATGGTATGTTTTGGC 57.320 32.000 0.00 0.00 0.00 4.52
949 2610 6.619329 ATTTTGGTATGGTATGTTTTGGCT 57.381 33.333 0.00 0.00 0.00 4.75
950 2611 5.398603 TTTGGTATGGTATGTTTTGGCTG 57.601 39.130 0.00 0.00 0.00 4.85
951 2612 4.040936 TGGTATGGTATGTTTTGGCTGT 57.959 40.909 0.00 0.00 0.00 4.40
952 2613 4.013728 TGGTATGGTATGTTTTGGCTGTC 58.986 43.478 0.00 0.00 0.00 3.51
953 2614 4.013728 GGTATGGTATGTTTTGGCTGTCA 58.986 43.478 0.00 0.00 0.00 3.58
954 2615 4.644685 GGTATGGTATGTTTTGGCTGTCAT 59.355 41.667 0.00 0.00 0.00 3.06
955 2616 4.989279 ATGGTATGTTTTGGCTGTCATC 57.011 40.909 0.00 0.00 0.00 2.92
956 2617 3.088532 TGGTATGTTTTGGCTGTCATCC 58.911 45.455 0.00 0.00 0.00 3.51
957 2618 3.088532 GGTATGTTTTGGCTGTCATCCA 58.911 45.455 0.00 0.00 0.00 3.41
958 2619 3.509575 GGTATGTTTTGGCTGTCATCCAA 59.490 43.478 3.97 3.97 41.47 3.53
962 2623 0.313672 TTTGGCTGTCATCCAAACGC 59.686 50.000 15.36 0.00 45.60 4.84
963 2624 0.821301 TTGGCTGTCATCCAAACGCA 60.821 50.000 5.66 0.00 40.35 5.24
964 2625 1.210155 GGCTGTCATCCAAACGCAC 59.790 57.895 0.00 0.00 0.00 5.34
1082 2744 3.332393 TTCCGCCATCTCCTCCCCT 62.332 63.158 0.00 0.00 0.00 4.79
1319 2981 4.407818 CGTGCTTCACTGTTTTGTGTTTA 58.592 39.130 0.00 0.00 38.90 2.01
1327 2989 8.433421 TTCACTGTTTTGTGTTTAAAACCAAA 57.567 26.923 10.50 8.64 45.41 3.28
1473 3138 2.477754 CGGTTCTCGTTTACCAGTTTCC 59.522 50.000 0.00 0.00 33.94 3.13
1515 3180 0.804989 CGAGTCATGCTTTTCCCACC 59.195 55.000 0.00 0.00 0.00 4.61
1618 3283 0.179045 GCATACCGGGTGCTGAATCT 60.179 55.000 22.36 0.00 39.45 2.40
1699 3364 7.783090 AATGCTCACTATCAGTTCAGTTATG 57.217 36.000 0.00 0.00 0.00 1.90
1830 3502 3.769536 CTGTTTTTGGTTGACAGTGGAC 58.230 45.455 0.00 0.00 36.81 4.02
2068 3745 7.933033 ACATTTTGAATCCTTTGCTGTACAAAT 59.067 29.630 0.00 0.00 46.90 2.32
2159 3843 6.433404 ACAAATCTCTTCACTGCTCATTTCAT 59.567 34.615 0.00 0.00 0.00 2.57
2278 3962 5.140454 AGGCATGTTCTTTCCTTAACAGTT 58.860 37.500 0.00 0.00 38.87 3.16
2478 4164 6.665680 GCTATCTCCATTTCTGTATAGAGGGA 59.334 42.308 0.00 6.50 33.70 4.20
2492 4178 8.127150 TGTATAGAGGGATCAACATAGTGATG 57.873 38.462 0.00 0.00 38.38 3.07
2563 4249 6.609616 TGATTTCCCTTTGTCTTTAGTTTGGT 59.390 34.615 0.00 0.00 0.00 3.67
2565 4251 7.957992 TTTCCCTTTGTCTTTAGTTTGGTTA 57.042 32.000 0.00 0.00 0.00 2.85
2566 4252 7.576861 TTCCCTTTGTCTTTAGTTTGGTTAG 57.423 36.000 0.00 0.00 0.00 2.34
2567 4253 5.533528 TCCCTTTGTCTTTAGTTTGGTTAGC 59.466 40.000 0.00 0.00 0.00 3.09
2581 4268 1.278127 GGTTAGCCTTGTGCCTGTCTA 59.722 52.381 0.00 0.00 42.71 2.59
2590 4277 5.744300 GCCTTGTGCCTGTCTAAGATATGAT 60.744 44.000 0.00 0.00 0.00 2.45
2629 4321 2.532250 TCATGCCTCTGACCAGTCTA 57.468 50.000 0.00 0.00 0.00 2.59
2698 4390 8.380099 AGTTTGTTCCACTACTATTTCATACCA 58.620 33.333 0.00 0.00 0.00 3.25
2711 4403 9.631257 ACTATTTCATACCATCAATGTCATTCA 57.369 29.630 0.00 0.00 0.00 2.57
2745 4438 2.260822 ACTGTGCCAGGTGAGAAGTAT 58.739 47.619 7.06 0.00 35.51 2.12
2851 4553 6.925610 TGCTATTGCATCTTCTCGTTATTT 57.074 33.333 0.00 0.00 45.31 1.40
3001 4719 5.772393 TTGGGTGTATAGTTCAACCTCAT 57.228 39.130 1.78 0.00 42.57 2.90
3014 4732 5.576563 TCAACCTCATTACCCTTTTCTCA 57.423 39.130 0.00 0.00 0.00 3.27
3042 4760 4.228210 AGTCAACCCCAGTATCATGTTCAT 59.772 41.667 0.00 0.00 0.00 2.57
3059 4781 1.752498 TCATGATGCCTGGTTGATTGC 59.248 47.619 0.00 0.00 0.00 3.56
3113 4835 2.715046 TGCATCAGATCTGGTTGGTTC 58.285 47.619 22.42 8.71 0.00 3.62
3256 4978 7.413328 CGAAGATGAATCACAAAGTGCTGATAA 60.413 37.037 0.00 0.00 32.98 1.75
3315 5037 0.245266 TGCTACGGAGATTGCAACGA 59.755 50.000 13.35 0.00 32.12 3.85
3324 5046 2.926838 GAGATTGCAACGAGAACTCCTC 59.073 50.000 0.00 0.00 38.55 3.71
3328 5050 0.390472 GCAACGAGAACTCCTCCTGG 60.390 60.000 0.00 0.00 38.71 4.45
3344 5066 4.194640 CTCCTGGTCTTTATGGTCACATG 58.805 47.826 0.00 0.00 37.97 3.21
4183 5908 1.374758 CTGCCAAGAGGTCACGGAC 60.375 63.158 0.00 0.00 37.19 4.79
4203 5928 0.984230 TCCTGAGGATGAAACGGCTT 59.016 50.000 0.00 0.00 0.00 4.35
4215 5940 5.856126 TGAAACGGCTTTTGTATCTGTAG 57.144 39.130 0.00 0.00 0.00 2.74
4270 5995 5.464168 CAAGCATGGTAAAGTTCTTTCCAG 58.536 41.667 0.00 11.37 0.00 3.86
4279 6004 0.312102 GTTCTTTCCAGTGGCAGTGC 59.688 55.000 16.96 6.55 0.00 4.40
4528 6253 7.639162 GAGTATCTTTCGACTTGAGTTTTCA 57.361 36.000 0.00 0.00 0.00 2.69
4538 6263 3.244422 ACTTGAGTTTTCATGAGGCGGTA 60.244 43.478 0.00 0.00 33.81 4.02
4787 6512 0.107831 TGGTGACAGTGTACAAGGGC 59.892 55.000 0.00 0.00 35.01 5.19
4893 6621 7.687941 ACTGACCATAACAAGGAAAACATAG 57.312 36.000 0.00 0.00 0.00 2.23
4998 6726 5.592054 ACAACGAATATGTGATCGATGACT 58.408 37.500 16.07 4.64 42.28 3.41
5003 6731 1.579698 ATGTGATCGATGACTGCAGC 58.420 50.000 15.27 7.45 0.00 5.25
5243 6972 2.014857 GCGGGGAGGTAAATCTTTCAC 58.985 52.381 0.00 0.00 0.00 3.18
5259 6988 2.195741 TCACGCACTCCAGTAGTAGT 57.804 50.000 0.00 0.00 35.76 2.73
5260 6989 3.339253 TCACGCACTCCAGTAGTAGTA 57.661 47.619 0.00 0.00 35.76 1.82
5261 6990 3.268330 TCACGCACTCCAGTAGTAGTAG 58.732 50.000 0.00 0.00 35.76 2.57
5263 6992 3.063725 CACGCACTCCAGTAGTAGTAGAC 59.936 52.174 0.00 0.00 35.76 2.59
5264 6993 3.055240 ACGCACTCCAGTAGTAGTAGACT 60.055 47.826 0.00 0.00 42.69 3.24
5312 7041 5.813080 AGTTAGACTTGTTGTTTCCACAC 57.187 39.130 0.00 0.00 30.32 3.82
5313 7042 4.638865 AGTTAGACTTGTTGTTTCCACACC 59.361 41.667 0.00 0.00 30.32 4.16
5314 7043 3.080300 AGACTTGTTGTTTCCACACCA 57.920 42.857 0.00 0.00 30.32 4.17
5315 7044 2.752903 AGACTTGTTGTTTCCACACCAC 59.247 45.455 0.00 0.00 30.32 4.16
5316 7045 2.490115 GACTTGTTGTTTCCACACCACA 59.510 45.455 0.00 0.00 30.32 4.17
5317 7046 2.230266 ACTTGTTGTTTCCACACCACAC 59.770 45.455 0.00 0.00 30.32 3.82
5318 7047 0.805614 TGTTGTTTCCACACCACACG 59.194 50.000 0.00 0.00 30.32 4.49
5319 7048 0.806241 GTTGTTTCCACACCACACGT 59.194 50.000 0.00 0.00 30.32 4.49
5346 7075 2.738314 GCCAACCTGAATGAATGTTTGC 59.262 45.455 0.00 0.00 0.00 3.68
5478 7210 3.120304 GCCTTAACGACAACCAGACAATC 60.120 47.826 0.00 0.00 0.00 2.67
5493 7225 2.293318 AATCAGCCTGGACGCTCCA 61.293 57.895 0.00 6.57 45.98 3.86
5554 7286 2.996168 CTTCCACGGGATGCGGATCC 62.996 65.000 26.54 26.54 46.99 3.36
5614 7346 8.743085 ATGTAATGAGAACATTTGATACTGCT 57.257 30.769 0.00 0.00 43.17 4.24
5629 7361 0.110644 CTGCTTTTTCTCCGCGTGTC 60.111 55.000 4.92 0.00 0.00 3.67
5895 7627 2.033194 GGACTACGTGTGCAAGCCC 61.033 63.158 0.00 0.00 36.96 5.19
5915 7647 2.359602 CCACCTGGAGCAGCACAG 60.360 66.667 0.00 9.54 37.39 3.66
6065 7797 1.227089 CAGAAGGCCCGATCTCGTG 60.227 63.158 0.00 0.00 37.74 4.35
6120 7852 1.290324 CTCCTGACTGGTCACGGTG 59.710 63.158 0.56 0.56 36.00 4.94
6127 7859 3.164977 TGGTCACGGTGCTTGGGA 61.165 61.111 2.51 0.00 0.00 4.37
6153 7885 4.898488 GCGTAATTATGCGACTGATGTTTC 59.102 41.667 13.67 0.00 36.72 2.78
6234 7999 1.618343 TGTCAGAGTGAAGCCGAATGA 59.382 47.619 0.00 0.00 0.00 2.57
6238 8003 1.478510 AGAGTGAAGCCGAATGACGAT 59.521 47.619 0.00 0.00 45.77 3.73
6287 8052 4.839668 TTCGTGTTAGGAATGTTTTGGG 57.160 40.909 0.00 0.00 0.00 4.12
6431 8202 3.340814 AGAGAAGGATGCGAACAACAT 57.659 42.857 0.00 0.00 0.00 2.71
6533 8306 2.294078 CCGCCTCCCTCCACTCTTT 61.294 63.158 0.00 0.00 0.00 2.52
6561 8334 1.378531 GCAGGACCGCATTAATCACA 58.621 50.000 3.82 0.00 0.00 3.58
6685 8458 1.214175 TGTGCTCTTTCCTGAAACCCA 59.786 47.619 0.00 0.00 0.00 4.51
6792 8569 1.446272 CACTTCCCGAGCGAAGACC 60.446 63.158 12.09 0.00 41.57 3.85
6797 8574 0.685131 TCCCGAGCGAAGACCCATTA 60.685 55.000 0.00 0.00 0.00 1.90
6826 8603 2.268920 GCTCCGCATTGTCCTCCA 59.731 61.111 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.658717 CGCCGATGATCGAGTGTCC 60.659 63.158 17.52 0.00 43.74 4.02
1 2 0.658829 CTCGCCGATGATCGAGTGTC 60.659 60.000 17.52 0.00 43.74 3.67
38 39 5.070685 ACTTTGGACCATCTAGACCAAAAC 58.929 41.667 20.00 2.19 46.77 2.43
42 43 4.422057 TGTACTTTGGACCATCTAGACCA 58.578 43.478 0.00 0.00 0.00 4.02
65 66 1.214305 ATAAGCAGACCAAGGCCCCA 61.214 55.000 0.00 0.00 0.00 4.96
98 99 7.512058 AGGGATACACTTGATAAGATGATCACT 59.488 37.037 0.00 0.00 34.93 3.41
140 141 8.950208 ATAAGAGGCTTACAAGTTTCATCTAC 57.050 34.615 0.00 0.00 0.00 2.59
190 1822 7.391148 ACGCATCCATACAATTTAGAAGTTT 57.609 32.000 0.00 0.00 0.00 2.66
196 1828 6.363577 AGACAACGCATCCATACAATTTAG 57.636 37.500 0.00 0.00 0.00 1.85
203 1835 1.064060 GCCAAGACAACGCATCCATAC 59.936 52.381 0.00 0.00 0.00 2.39
215 1847 6.239458 CCCCAACTTTTATTAAAGCCAAGACA 60.239 38.462 4.15 0.00 43.72 3.41
217 1849 5.279758 GCCCCAACTTTTATTAAAGCCAAGA 60.280 40.000 4.15 0.00 43.72 3.02
223 1855 4.081142 CCCCTGCCCCAACTTTTATTAAAG 60.081 45.833 2.71 2.71 45.08 1.85
271 1903 5.589050 GGGTGAAAGTGTAGTGTCTTTCTTT 59.411 40.000 15.33 0.00 45.36 2.52
274 1906 4.704965 AGGGTGAAAGTGTAGTGTCTTTC 58.295 43.478 9.71 9.71 45.36 2.62
278 1920 7.506328 AAAAATAGGGTGAAAGTGTAGTGTC 57.494 36.000 0.00 0.00 0.00 3.67
378 2020 8.877779 TGACGAACAACATTTGAAATTTGAAAT 58.122 25.926 9.48 9.48 0.00 2.17
379 2021 8.244494 TGACGAACAACATTTGAAATTTGAAA 57.756 26.923 5.26 5.26 0.00 2.69
380 2022 7.543868 ACTGACGAACAACATTTGAAATTTGAA 59.456 29.630 14.93 0.00 0.00 2.69
381 2023 7.009083 CACTGACGAACAACATTTGAAATTTGA 59.991 33.333 14.93 0.00 0.00 2.69
382 2024 7.112397 CACTGACGAACAACATTTGAAATTTG 58.888 34.615 0.00 9.61 0.00 2.32
383 2025 6.237808 GCACTGACGAACAACATTTGAAATTT 60.238 34.615 0.00 0.00 0.00 1.82
384 2026 5.231991 GCACTGACGAACAACATTTGAAATT 59.768 36.000 0.00 0.00 0.00 1.82
396 2038 0.813610 CCACTTGGCACTGACGAACA 60.814 55.000 0.00 0.00 0.00 3.18
474 2128 1.078115 GTTTTGGGGTAGGGGGAGAA 58.922 55.000 0.00 0.00 0.00 2.87
475 2129 0.847758 GGTTTTGGGGTAGGGGGAGA 60.848 60.000 0.00 0.00 0.00 3.71
514 2175 4.380550 GCTTAAACCAAACATACCCAGAGC 60.381 45.833 0.00 0.00 0.00 4.09
515 2176 4.157840 GGCTTAAACCAAACATACCCAGAG 59.842 45.833 0.00 0.00 0.00 3.35
516 2177 4.083565 GGCTTAAACCAAACATACCCAGA 58.916 43.478 0.00 0.00 0.00 3.86
517 2178 3.194755 GGGCTTAAACCAAACATACCCAG 59.805 47.826 0.00 0.00 34.82 4.45
518 2179 3.166679 GGGCTTAAACCAAACATACCCA 58.833 45.455 0.00 0.00 34.82 4.51
519 2180 2.498481 GGGGCTTAAACCAAACATACCC 59.502 50.000 0.00 0.00 0.00 3.69
520 2181 3.166679 TGGGGCTTAAACCAAACATACC 58.833 45.455 0.00 0.00 32.89 2.73
521 2182 3.194755 CCTGGGGCTTAAACCAAACATAC 59.805 47.826 0.00 0.00 36.09 2.39
522 2183 3.181416 ACCTGGGGCTTAAACCAAACATA 60.181 43.478 0.00 0.00 36.09 2.29
523 2184 2.256306 CCTGGGGCTTAAACCAAACAT 58.744 47.619 0.00 0.00 36.09 2.71
524 2185 1.062810 ACCTGGGGCTTAAACCAAACA 60.063 47.619 0.00 0.00 36.09 2.83
525 2186 1.712056 ACCTGGGGCTTAAACCAAAC 58.288 50.000 0.00 0.00 36.09 2.93
526 2187 2.043227 CAACCTGGGGCTTAAACCAAA 58.957 47.619 0.00 0.00 36.09 3.28
527 2188 1.710816 CAACCTGGGGCTTAAACCAA 58.289 50.000 0.00 0.00 36.09 3.67
528 2189 0.830023 GCAACCTGGGGCTTAAACCA 60.830 55.000 0.00 0.00 35.05 3.67
529 2190 1.541310 GGCAACCTGGGGCTTAAACC 61.541 60.000 11.58 0.00 0.00 3.27
530 2191 0.830023 TGGCAACCTGGGGCTTAAAC 60.830 55.000 11.58 0.00 0.00 2.01
531 2192 0.830023 GTGGCAACCTGGGGCTTAAA 60.830 55.000 11.58 0.00 0.00 1.52
532 2193 1.228737 GTGGCAACCTGGGGCTTAA 60.229 57.895 11.58 0.00 0.00 1.85
533 2194 2.438795 GTGGCAACCTGGGGCTTA 59.561 61.111 11.58 0.68 0.00 3.09
534 2195 3.831637 TGTGGCAACCTGGGGCTT 61.832 61.111 11.58 0.00 0.00 4.35
535 2196 4.603535 GTGTGGCAACCTGGGGCT 62.604 66.667 11.58 0.00 0.00 5.19
537 2198 3.747521 TTGGTGTGGCAACCTGGGG 62.748 63.158 16.26 0.00 41.16 4.96
538 2199 1.333636 TTTTGGTGTGGCAACCTGGG 61.334 55.000 16.26 0.00 41.16 4.45
539 2200 0.758123 ATTTTGGTGTGGCAACCTGG 59.242 50.000 16.26 0.00 41.16 4.45
540 2201 2.618442 AATTTTGGTGTGGCAACCTG 57.382 45.000 16.26 0.00 41.16 4.00
541 2202 3.277715 CAAAATTTTGGTGTGGCAACCT 58.722 40.909 21.00 0.00 41.16 3.50
542 2203 3.689309 CAAAATTTTGGTGTGGCAACC 57.311 42.857 21.00 10.67 40.94 3.77
562 2223 3.290948 TGCCCTGACATTGGTTATACC 57.709 47.619 0.00 0.00 39.22 2.73
563 2224 4.460263 TCATGCCCTGACATTGGTTATAC 58.540 43.478 0.00 0.00 0.00 1.47
564 2225 4.787135 TCATGCCCTGACATTGGTTATA 57.213 40.909 0.00 0.00 0.00 0.98
565 2226 3.668141 TCATGCCCTGACATTGGTTAT 57.332 42.857 0.00 0.00 0.00 1.89
575 2236 3.645212 TCAAAATTTTGGTCATGCCCTGA 59.355 39.130 26.45 4.16 38.66 3.86
576 2237 4.005487 TCAAAATTTTGGTCATGCCCTG 57.995 40.909 26.45 1.86 38.66 4.45
577 2238 4.914177 ATCAAAATTTTGGTCATGCCCT 57.086 36.364 26.45 2.75 38.66 5.19
578 2239 5.065090 GCTTATCAAAATTTTGGTCATGCCC 59.935 40.000 26.45 6.33 38.66 5.36
579 2240 5.642919 TGCTTATCAAAATTTTGGTCATGCC 59.357 36.000 26.45 10.77 38.66 4.40
580 2241 6.724694 TGCTTATCAAAATTTTGGTCATGC 57.275 33.333 26.45 22.69 38.66 4.06
581 2242 9.763465 GAATTGCTTATCAAAATTTTGGTCATG 57.237 29.630 26.45 15.66 38.34 3.07
582 2243 9.729281 AGAATTGCTTATCAAAATTTTGGTCAT 57.271 25.926 26.45 16.87 38.34 3.06
583 2244 9.558396 AAGAATTGCTTATCAAAATTTTGGTCA 57.442 25.926 26.45 13.42 38.34 4.02
598 2259 8.413229 GGCTACAATCCAAATAAGAATTGCTTA 58.587 33.333 0.00 0.00 42.92 3.09
599 2260 7.093377 TGGCTACAATCCAAATAAGAATTGCTT 60.093 33.333 0.00 0.00 40.68 3.91
600 2261 6.380846 TGGCTACAATCCAAATAAGAATTGCT 59.619 34.615 0.00 0.00 0.00 3.91
601 2262 6.572519 TGGCTACAATCCAAATAAGAATTGC 58.427 36.000 0.00 0.00 0.00 3.56
602 2263 7.592533 CGATGGCTACAATCCAAATAAGAATTG 59.407 37.037 0.00 0.00 37.13 2.32
603 2264 7.502226 TCGATGGCTACAATCCAAATAAGAATT 59.498 33.333 0.00 0.00 37.13 2.17
604 2265 6.998074 TCGATGGCTACAATCCAAATAAGAAT 59.002 34.615 0.00 0.00 37.13 2.40
605 2266 6.353323 TCGATGGCTACAATCCAAATAAGAA 58.647 36.000 0.00 0.00 37.13 2.52
606 2267 5.924356 TCGATGGCTACAATCCAAATAAGA 58.076 37.500 0.00 0.00 37.13 2.10
607 2268 6.618287 TTCGATGGCTACAATCCAAATAAG 57.382 37.500 0.00 0.00 37.13 1.73
608 2269 7.397892 TTTTCGATGGCTACAATCCAAATAA 57.602 32.000 0.00 0.00 37.13 1.40
609 2270 7.397892 TTTTTCGATGGCTACAATCCAAATA 57.602 32.000 0.00 0.00 37.13 1.40
610 2271 5.913137 TTTTCGATGGCTACAATCCAAAT 57.087 34.783 0.00 0.00 37.13 2.32
611 2272 5.708948 CTTTTTCGATGGCTACAATCCAAA 58.291 37.500 0.00 0.00 37.13 3.28
612 2273 4.380444 GCTTTTTCGATGGCTACAATCCAA 60.380 41.667 0.00 0.00 37.13 3.53
613 2274 3.128589 GCTTTTTCGATGGCTACAATCCA 59.871 43.478 0.00 0.00 38.09 3.41
614 2275 3.378427 AGCTTTTTCGATGGCTACAATCC 59.622 43.478 0.00 0.00 32.94 3.01
615 2276 4.346129 CAGCTTTTTCGATGGCTACAATC 58.654 43.478 0.00 0.00 33.43 2.67
616 2277 3.428045 GCAGCTTTTTCGATGGCTACAAT 60.428 43.478 0.00 0.00 33.43 2.71
617 2278 2.095263 GCAGCTTTTTCGATGGCTACAA 60.095 45.455 0.00 0.00 33.43 2.41
618 2279 1.468520 GCAGCTTTTTCGATGGCTACA 59.531 47.619 0.00 0.00 33.43 2.74
619 2280 1.202188 GGCAGCTTTTTCGATGGCTAC 60.202 52.381 1.14 0.00 41.88 3.58
620 2281 1.094785 GGCAGCTTTTTCGATGGCTA 58.905 50.000 1.14 0.00 41.88 3.93
621 2282 1.598701 GGGCAGCTTTTTCGATGGCT 61.599 55.000 7.77 2.71 44.18 4.75
622 2283 1.153765 GGGCAGCTTTTTCGATGGC 60.154 57.895 0.00 0.00 44.03 4.40
623 2284 0.109132 GTGGGCAGCTTTTTCGATGG 60.109 55.000 0.00 0.00 0.00 3.51
624 2285 0.597568 TGTGGGCAGCTTTTTCGATG 59.402 50.000 0.00 0.00 0.00 3.84
625 2286 1.327303 TTGTGGGCAGCTTTTTCGAT 58.673 45.000 0.00 0.00 0.00 3.59
626 2287 1.107114 TTTGTGGGCAGCTTTTTCGA 58.893 45.000 0.00 0.00 0.00 3.71
627 2288 1.794116 CATTTGTGGGCAGCTTTTTCG 59.206 47.619 0.00 0.00 0.00 3.46
628 2289 1.532437 GCATTTGTGGGCAGCTTTTTC 59.468 47.619 0.00 0.00 0.00 2.29
629 2290 1.134159 TGCATTTGTGGGCAGCTTTTT 60.134 42.857 0.00 0.00 34.58 1.94
630 2291 0.469070 TGCATTTGTGGGCAGCTTTT 59.531 45.000 0.00 0.00 34.58 2.27
631 2292 0.249996 GTGCATTTGTGGGCAGCTTT 60.250 50.000 0.00 0.00 41.35 3.51
632 2293 1.368579 GTGCATTTGTGGGCAGCTT 59.631 52.632 0.00 0.00 41.35 3.74
633 2294 1.189524 ATGTGCATTTGTGGGCAGCT 61.190 50.000 0.00 0.00 41.35 4.24
634 2295 1.017177 CATGTGCATTTGTGGGCAGC 61.017 55.000 0.00 0.00 41.35 5.25
635 2296 1.017177 GCATGTGCATTTGTGGGCAG 61.017 55.000 0.00 0.00 41.35 4.85
636 2297 1.004799 GCATGTGCATTTGTGGGCA 60.005 52.632 0.00 0.00 41.59 5.36
637 2298 3.879159 GCATGTGCATTTGTGGGC 58.121 55.556 0.00 0.00 41.59 5.36
647 2308 1.750351 CACGATTAGCATGCATGTGC 58.250 50.000 26.79 16.21 45.38 4.57
648 2309 1.750351 GCACGATTAGCATGCATGTG 58.250 50.000 26.79 19.32 39.23 3.21
649 2310 0.305617 CGCACGATTAGCATGCATGT 59.694 50.000 26.79 16.07 39.39 3.21
650 2311 0.582960 TCGCACGATTAGCATGCATG 59.417 50.000 22.70 22.70 39.39 4.06
651 2312 0.863799 CTCGCACGATTAGCATGCAT 59.136 50.000 21.98 5.15 39.39 3.96
652 2313 1.153597 CCTCGCACGATTAGCATGCA 61.154 55.000 21.98 0.00 39.39 3.96
653 2314 1.566563 CCTCGCACGATTAGCATGC 59.433 57.895 10.51 10.51 35.96 4.06
654 2315 1.835483 GCCCTCGCACGATTAGCATG 61.835 60.000 0.00 0.00 34.03 4.06
655 2316 1.595382 GCCCTCGCACGATTAGCAT 60.595 57.895 0.00 0.00 34.03 3.79
656 2317 2.202878 GCCCTCGCACGATTAGCA 60.203 61.111 0.00 0.00 34.03 3.49
657 2318 2.967615 GGCCCTCGCACGATTAGC 60.968 66.667 0.00 0.00 36.38 3.09
658 2319 2.280186 GGGCCCTCGCACGATTAG 60.280 66.667 17.04 0.00 36.38 1.73
659 2320 3.078196 TGGGCCCTCGCACGATTA 61.078 61.111 25.70 0.00 43.51 1.75
660 2321 4.778143 GTGGGCCCTCGCACGATT 62.778 66.667 25.70 0.00 43.51 3.34
665 2326 0.905809 TTACTTAGTGGGCCCTCGCA 60.906 55.000 25.70 10.32 36.38 5.10
666 2327 0.461516 GTTACTTAGTGGGCCCTCGC 60.462 60.000 25.70 13.43 0.00 5.03
667 2328 1.192428 AGTTACTTAGTGGGCCCTCG 58.808 55.000 25.70 9.58 0.00 4.63
668 2329 3.005578 CGATAGTTACTTAGTGGGCCCTC 59.994 52.174 25.70 20.95 0.00 4.30
669 2330 2.963782 CGATAGTTACTTAGTGGGCCCT 59.036 50.000 25.70 5.93 0.00 5.19
670 2331 2.036862 CCGATAGTTACTTAGTGGGCCC 59.963 54.545 17.59 17.59 0.00 5.80
671 2332 2.961062 TCCGATAGTTACTTAGTGGGCC 59.039 50.000 0.00 0.00 0.00 5.80
672 2333 3.382546 TGTCCGATAGTTACTTAGTGGGC 59.617 47.826 0.00 0.00 0.00 5.36
673 2334 5.587388 TTGTCCGATAGTTACTTAGTGGG 57.413 43.478 0.00 0.00 0.00 4.61
674 2335 6.860080 TCTTTGTCCGATAGTTACTTAGTGG 58.140 40.000 0.00 0.00 0.00 4.00
675 2336 8.928270 ATTCTTTGTCCGATAGTTACTTAGTG 57.072 34.615 0.00 0.00 0.00 2.74
676 2337 9.939802 AAATTCTTTGTCCGATAGTTACTTAGT 57.060 29.630 0.00 0.00 0.00 2.24
678 2339 8.662141 GCAAATTCTTTGTCCGATAGTTACTTA 58.338 33.333 0.00 0.00 42.56 2.24
679 2340 7.174253 TGCAAATTCTTTGTCCGATAGTTACTT 59.826 33.333 0.00 0.00 42.56 2.24
680 2341 6.653320 TGCAAATTCTTTGTCCGATAGTTACT 59.347 34.615 1.97 0.00 42.56 2.24
681 2342 6.837992 TGCAAATTCTTTGTCCGATAGTTAC 58.162 36.000 1.97 0.00 42.56 2.50
682 2343 6.403200 GCTGCAAATTCTTTGTCCGATAGTTA 60.403 38.462 0.00 0.00 42.56 2.24
683 2344 5.619981 GCTGCAAATTCTTTGTCCGATAGTT 60.620 40.000 0.00 0.00 42.56 2.24
684 2345 4.142600 GCTGCAAATTCTTTGTCCGATAGT 60.143 41.667 0.00 0.00 42.56 2.12
685 2346 4.346129 GCTGCAAATTCTTTGTCCGATAG 58.654 43.478 0.00 0.00 42.56 2.08
686 2347 3.128589 GGCTGCAAATTCTTTGTCCGATA 59.871 43.478 0.50 0.00 42.56 2.92
687 2348 2.094545 GGCTGCAAATTCTTTGTCCGAT 60.095 45.455 0.50 0.00 42.56 4.18
688 2349 1.269448 GGCTGCAAATTCTTTGTCCGA 59.731 47.619 0.50 0.00 42.56 4.55
689 2350 1.270550 AGGCTGCAAATTCTTTGTCCG 59.729 47.619 0.50 0.00 42.56 4.79
690 2351 3.507622 ACTAGGCTGCAAATTCTTTGTCC 59.492 43.478 0.50 1.96 42.56 4.02
691 2352 4.773323 ACTAGGCTGCAAATTCTTTGTC 57.227 40.909 0.50 0.00 42.56 3.18
692 2353 4.797275 GCAACTAGGCTGCAAATTCTTTGT 60.797 41.667 12.75 0.00 42.56 2.83
693 2354 3.676646 GCAACTAGGCTGCAAATTCTTTG 59.323 43.478 12.75 0.00 43.44 2.77
694 2355 3.321682 TGCAACTAGGCTGCAAATTCTTT 59.678 39.130 16.80 0.00 46.47 2.52
695 2356 2.892852 TGCAACTAGGCTGCAAATTCTT 59.107 40.909 16.80 0.00 46.47 2.52
696 2357 2.517959 TGCAACTAGGCTGCAAATTCT 58.482 42.857 16.80 0.00 46.47 2.40
703 2364 1.138247 GTGCATGCAACTAGGCTGC 59.862 57.895 24.58 11.16 40.35 5.25
704 2365 0.961857 TGGTGCATGCAACTAGGCTG 60.962 55.000 34.07 0.00 34.17 4.85
705 2366 0.962356 GTGGTGCATGCAACTAGGCT 60.962 55.000 34.07 0.00 34.17 4.58
706 2367 1.243342 TGTGGTGCATGCAACTAGGC 61.243 55.000 34.07 21.37 34.17 3.93
707 2368 0.806868 CTGTGGTGCATGCAACTAGG 59.193 55.000 34.07 19.88 34.17 3.02
708 2369 1.527034 ACTGTGGTGCATGCAACTAG 58.473 50.000 34.07 30.40 34.17 2.57
709 2370 2.849294 TACTGTGGTGCATGCAACTA 57.151 45.000 34.07 22.25 34.17 2.24
710 2371 1.979855 TTACTGTGGTGCATGCAACT 58.020 45.000 34.07 18.09 34.17 3.16
711 2372 4.433186 TTATTACTGTGGTGCATGCAAC 57.567 40.909 29.01 29.01 0.00 4.17
712 2373 5.459536 TTTTATTACTGTGGTGCATGCAA 57.540 34.783 24.58 4.60 0.00 4.08
713 2374 5.459536 TTTTTATTACTGTGGTGCATGCA 57.540 34.783 18.46 18.46 0.00 3.96
734 2395 5.541101 GTGGGTCCCAGGTAGTTTTATTTTT 59.459 40.000 12.21 0.00 32.34 1.94
735 2396 5.081728 GTGGGTCCCAGGTAGTTTTATTTT 58.918 41.667 12.21 0.00 32.34 1.82
736 2397 4.509663 GGTGGGTCCCAGGTAGTTTTATTT 60.510 45.833 12.21 0.00 32.34 1.40
737 2398 3.010920 GGTGGGTCCCAGGTAGTTTTATT 59.989 47.826 12.21 0.00 32.34 1.40
738 2399 2.579400 GGTGGGTCCCAGGTAGTTTTAT 59.421 50.000 12.21 0.00 32.34 1.40
739 2400 1.987368 GGTGGGTCCCAGGTAGTTTTA 59.013 52.381 12.21 0.00 32.34 1.52
740 2401 0.775542 GGTGGGTCCCAGGTAGTTTT 59.224 55.000 12.21 0.00 32.34 2.43
741 2402 0.402272 TGGTGGGTCCCAGGTAGTTT 60.402 55.000 12.21 0.00 32.34 2.66
742 2403 0.402272 TTGGTGGGTCCCAGGTAGTT 60.402 55.000 12.21 0.00 35.49 2.24
743 2404 0.840722 CTTGGTGGGTCCCAGGTAGT 60.841 60.000 12.21 0.00 35.49 2.73
744 2405 0.546747 TCTTGGTGGGTCCCAGGTAG 60.547 60.000 12.21 8.75 35.49 3.18
745 2406 0.838987 GTCTTGGTGGGTCCCAGGTA 60.839 60.000 12.21 0.00 35.49 3.08
746 2407 2.154074 GTCTTGGTGGGTCCCAGGT 61.154 63.158 12.21 0.00 35.49 4.00
747 2408 2.129555 CTGTCTTGGTGGGTCCCAGG 62.130 65.000 12.21 2.23 35.49 4.45
748 2409 1.127567 TCTGTCTTGGTGGGTCCCAG 61.128 60.000 12.21 0.00 35.49 4.45
749 2410 1.074090 TCTGTCTTGGTGGGTCCCA 60.074 57.895 6.47 6.47 34.77 4.37
750 2411 0.836400 TCTCTGTCTTGGTGGGTCCC 60.836 60.000 0.00 0.00 34.77 4.46
751 2412 0.610687 CTCTCTGTCTTGGTGGGTCC 59.389 60.000 0.00 0.00 0.00 4.46
752 2413 0.610687 CCTCTCTGTCTTGGTGGGTC 59.389 60.000 0.00 0.00 0.00 4.46
753 2414 0.838122 CCCTCTCTGTCTTGGTGGGT 60.838 60.000 0.00 0.00 0.00 4.51
754 2415 1.986413 CCCTCTCTGTCTTGGTGGG 59.014 63.158 0.00 0.00 0.00 4.61
755 2416 1.298014 GCCCTCTCTGTCTTGGTGG 59.702 63.158 0.00 0.00 0.00 4.61
756 2417 0.397941 TTGCCCTCTCTGTCTTGGTG 59.602 55.000 0.00 0.00 0.00 4.17
757 2418 1.140312 TTTGCCCTCTCTGTCTTGGT 58.860 50.000 0.00 0.00 0.00 3.67
758 2419 2.157738 CTTTTGCCCTCTCTGTCTTGG 58.842 52.381 0.00 0.00 0.00 3.61
759 2420 2.157738 CCTTTTGCCCTCTCTGTCTTG 58.842 52.381 0.00 0.00 0.00 3.02
760 2421 1.777272 ACCTTTTGCCCTCTCTGTCTT 59.223 47.619 0.00 0.00 0.00 3.01
761 2422 1.072965 CACCTTTTGCCCTCTCTGTCT 59.927 52.381 0.00 0.00 0.00 3.41
762 2423 1.528129 CACCTTTTGCCCTCTCTGTC 58.472 55.000 0.00 0.00 0.00 3.51
763 2424 0.538287 GCACCTTTTGCCCTCTCTGT 60.538 55.000 0.00 0.00 46.63 3.41
764 2425 2.261215 GCACCTTTTGCCCTCTCTG 58.739 57.895 0.00 0.00 46.63 3.35
765 2426 4.830573 GCACCTTTTGCCCTCTCT 57.169 55.556 0.00 0.00 46.63 3.10
789 2450 2.641197 GGAGAAGCTCCGCCAAAAA 58.359 52.632 0.00 0.00 41.08 1.94
790 2451 4.397348 GGAGAAGCTCCGCCAAAA 57.603 55.556 0.00 0.00 41.08 2.44
797 2458 3.418744 GAGGACGCGGAGAAGCTCC 62.419 68.421 12.47 6.27 46.44 4.70
798 2459 2.103340 GAGGACGCGGAGAAGCTC 59.897 66.667 12.47 0.00 34.40 4.09
799 2460 2.676822 TGAGGACGCGGAGAAGCT 60.677 61.111 12.47 0.00 34.40 3.74
800 2461 2.202676 CTGAGGACGCGGAGAAGC 60.203 66.667 12.47 0.00 0.00 3.86
801 2462 2.202676 GCTGAGGACGCGGAGAAG 60.203 66.667 12.47 2.11 0.00 2.85
802 2463 2.676822 AGCTGAGGACGCGGAGAA 60.677 61.111 12.47 0.00 0.00 2.87
803 2464 3.134792 GAGCTGAGGACGCGGAGA 61.135 66.667 12.47 0.00 0.00 3.71
804 2465 4.544689 CGAGCTGAGGACGCGGAG 62.545 72.222 12.47 0.00 0.00 4.63
809 2470 2.811317 GTTGGCGAGCTGAGGACG 60.811 66.667 0.00 0.00 0.00 4.79
810 2471 1.446966 GAGTTGGCGAGCTGAGGAC 60.447 63.158 0.00 0.00 0.00 3.85
811 2472 2.973899 GAGTTGGCGAGCTGAGGA 59.026 61.111 0.00 0.00 0.00 3.71
812 2473 2.507992 CGAGTTGGCGAGCTGAGG 60.508 66.667 0.00 0.00 0.00 3.86
813 2474 1.373497 AACGAGTTGGCGAGCTGAG 60.373 57.895 0.00 0.00 34.83 3.35
814 2475 1.664649 CAACGAGTTGGCGAGCTGA 60.665 57.895 8.01 0.00 36.95 4.26
815 2476 2.856032 CAACGAGTTGGCGAGCTG 59.144 61.111 8.01 0.00 36.95 4.24
823 2484 3.733727 GTGTAATTTTGGCCAACGAGTTG 59.266 43.478 20.35 8.87 40.13 3.16
824 2485 3.381908 TGTGTAATTTTGGCCAACGAGTT 59.618 39.130 20.35 10.42 0.00 3.01
825 2486 2.952978 TGTGTAATTTTGGCCAACGAGT 59.047 40.909 20.35 11.93 0.00 4.18
826 2487 3.634568 TGTGTAATTTTGGCCAACGAG 57.365 42.857 20.35 0.00 0.00 4.18
827 2488 3.858877 GCATGTGTAATTTTGGCCAACGA 60.859 43.478 20.35 10.72 0.00 3.85
828 2489 2.411409 GCATGTGTAATTTTGGCCAACG 59.589 45.455 20.35 0.00 0.00 4.10
829 2490 2.411409 CGCATGTGTAATTTTGGCCAAC 59.589 45.455 20.35 7.76 0.00 3.77
830 2491 2.297315 TCGCATGTGTAATTTTGGCCAA 59.703 40.909 16.05 16.05 0.00 4.52
831 2492 1.889170 TCGCATGTGTAATTTTGGCCA 59.111 42.857 0.00 0.00 0.00 5.36
832 2493 2.645730 TCGCATGTGTAATTTTGGCC 57.354 45.000 6.09 0.00 0.00 5.36
833 2494 3.306703 CCAATCGCATGTGTAATTTTGGC 59.693 43.478 6.09 0.00 0.00 4.52
834 2495 3.306703 GCCAATCGCATGTGTAATTTTGG 59.693 43.478 6.09 12.79 37.47 3.28
835 2496 3.000872 CGCCAATCGCATGTGTAATTTTG 60.001 43.478 6.09 4.40 37.30 2.44
836 2497 3.178267 CGCCAATCGCATGTGTAATTTT 58.822 40.909 6.09 0.00 37.30 1.82
837 2498 2.479389 CCGCCAATCGCATGTGTAATTT 60.479 45.455 6.09 0.00 37.30 1.82
838 2499 1.065401 CCGCCAATCGCATGTGTAATT 59.935 47.619 6.09 0.00 37.30 1.40
839 2500 0.662619 CCGCCAATCGCATGTGTAAT 59.337 50.000 6.09 0.00 37.30 1.89
840 2501 1.987704 GCCGCCAATCGCATGTGTAA 61.988 55.000 6.09 0.00 37.30 2.41
841 2502 2.468670 GCCGCCAATCGCATGTGTA 61.469 57.895 6.09 0.00 37.30 2.90
842 2503 3.814268 GCCGCCAATCGCATGTGT 61.814 61.111 6.09 0.00 37.30 3.72
843 2504 3.511595 AGCCGCCAATCGCATGTG 61.512 61.111 0.00 0.00 37.30 3.21
844 2505 3.511595 CAGCCGCCAATCGCATGT 61.512 61.111 0.00 0.00 37.30 3.21
845 2506 4.918129 GCAGCCGCCAATCGCATG 62.918 66.667 0.00 0.00 37.30 4.06
862 2523 2.571870 AAAAATCGGCGCGCTAACGG 62.572 55.000 32.29 14.95 40.57 4.44
863 2524 1.225908 AAAAATCGGCGCGCTAACG 60.226 52.632 32.29 25.51 44.07 3.18
864 2525 4.757554 AAAAATCGGCGCGCTAAC 57.242 50.000 32.29 13.86 0.00 2.34
881 2542 0.958091 CTCGTTTGGATTGGTGCCAA 59.042 50.000 6.08 6.08 43.31 4.52
882 2543 0.109532 TCTCGTTTGGATTGGTGCCA 59.890 50.000 0.00 0.00 0.00 4.92
883 2544 0.521735 GTCTCGTTTGGATTGGTGCC 59.478 55.000 0.00 0.00 0.00 5.01
884 2545 0.521735 GGTCTCGTTTGGATTGGTGC 59.478 55.000 0.00 0.00 0.00 5.01
885 2546 1.165270 GGGTCTCGTTTGGATTGGTG 58.835 55.000 0.00 0.00 0.00 4.17
886 2547 0.768622 TGGGTCTCGTTTGGATTGGT 59.231 50.000 0.00 0.00 0.00 3.67
887 2548 1.904287 TTGGGTCTCGTTTGGATTGG 58.096 50.000 0.00 0.00 0.00 3.16
888 2549 2.884639 ACTTTGGGTCTCGTTTGGATTG 59.115 45.455 0.00 0.00 0.00 2.67
889 2550 3.146847 GACTTTGGGTCTCGTTTGGATT 58.853 45.455 0.00 0.00 41.46 3.01
890 2551 2.779506 GACTTTGGGTCTCGTTTGGAT 58.220 47.619 0.00 0.00 41.46 3.41
891 2552 2.249844 GACTTTGGGTCTCGTTTGGA 57.750 50.000 0.00 0.00 41.46 3.53
903 2564 1.662044 GCTTGCCCACAGACTTTGG 59.338 57.895 0.18 0.18 0.00 3.28
904 2565 1.108727 TGGCTTGCCCACAGACTTTG 61.109 55.000 9.35 0.00 39.18 2.77
905 2566 0.396974 TTGGCTTGCCCACAGACTTT 60.397 50.000 9.35 0.00 45.34 2.66
906 2567 0.396974 TTTGGCTTGCCCACAGACTT 60.397 50.000 9.35 0.00 45.34 3.01
907 2568 0.396974 TTTTGGCTTGCCCACAGACT 60.397 50.000 9.35 0.00 45.34 3.24
908 2569 0.681175 ATTTTGGCTTGCCCACAGAC 59.319 50.000 9.35 0.00 45.34 3.51
909 2570 1.422531 AATTTTGGCTTGCCCACAGA 58.577 45.000 9.35 0.00 45.34 3.41
910 2571 2.259266 AAATTTTGGCTTGCCCACAG 57.741 45.000 9.35 0.00 45.34 3.66
911 2572 2.295885 CAAAATTTTGGCTTGCCCACA 58.704 42.857 21.00 0.00 45.34 4.17
922 2583 8.020244 GCCAAAACATACCATACCAAAATTTTG 58.980 33.333 21.65 21.65 37.90 2.44
923 2584 7.941790 AGCCAAAACATACCATACCAAAATTTT 59.058 29.630 0.00 0.00 0.00 1.82
924 2585 7.390162 CAGCCAAAACATACCATACCAAAATTT 59.610 33.333 0.00 0.00 0.00 1.82
925 2586 6.878389 CAGCCAAAACATACCATACCAAAATT 59.122 34.615 0.00 0.00 0.00 1.82
926 2587 6.013812 ACAGCCAAAACATACCATACCAAAAT 60.014 34.615 0.00 0.00 0.00 1.82
927 2588 5.305644 ACAGCCAAAACATACCATACCAAAA 59.694 36.000 0.00 0.00 0.00 2.44
928 2589 4.835615 ACAGCCAAAACATACCATACCAAA 59.164 37.500 0.00 0.00 0.00 3.28
929 2590 4.411927 ACAGCCAAAACATACCATACCAA 58.588 39.130 0.00 0.00 0.00 3.67
930 2591 4.013728 GACAGCCAAAACATACCATACCA 58.986 43.478 0.00 0.00 0.00 3.25
931 2592 4.013728 TGACAGCCAAAACATACCATACC 58.986 43.478 0.00 0.00 0.00 2.73
932 2593 5.221048 GGATGACAGCCAAAACATACCATAC 60.221 44.000 4.45 0.00 0.00 2.39
933 2594 4.887071 GGATGACAGCCAAAACATACCATA 59.113 41.667 4.45 0.00 0.00 2.74
934 2595 3.701040 GGATGACAGCCAAAACATACCAT 59.299 43.478 4.45 0.00 0.00 3.55
935 2596 3.088532 GGATGACAGCCAAAACATACCA 58.911 45.455 4.45 0.00 0.00 3.25
936 2597 3.088532 TGGATGACAGCCAAAACATACC 58.911 45.455 10.71 0.00 31.13 2.73
937 2598 4.782019 TTGGATGACAGCCAAAACATAC 57.218 40.909 22.51 0.00 42.13 2.39
944 2605 0.821301 TGCGTTTGGATGACAGCCAA 60.821 50.000 21.04 21.04 43.31 4.52
945 2606 1.228094 TGCGTTTGGATGACAGCCA 60.228 52.632 8.74 8.74 0.00 4.75
946 2607 1.210155 GTGCGTTTGGATGACAGCC 59.790 57.895 1.75 1.75 0.00 4.85
947 2608 1.210155 GGTGCGTTTGGATGACAGC 59.790 57.895 0.00 0.00 0.00 4.40
948 2609 0.606401 AGGGTGCGTTTGGATGACAG 60.606 55.000 0.00 0.00 0.00 3.51
949 2610 0.605319 GAGGGTGCGTTTGGATGACA 60.605 55.000 0.00 0.00 0.00 3.58
950 2611 0.321653 AGAGGGTGCGTTTGGATGAC 60.322 55.000 0.00 0.00 0.00 3.06
951 2612 0.036388 GAGAGGGTGCGTTTGGATGA 60.036 55.000 0.00 0.00 0.00 2.92
952 2613 1.026718 GGAGAGGGTGCGTTTGGATG 61.027 60.000 0.00 0.00 0.00 3.51
953 2614 1.299976 GGAGAGGGTGCGTTTGGAT 59.700 57.895 0.00 0.00 0.00 3.41
954 2615 2.747686 GGAGAGGGTGCGTTTGGA 59.252 61.111 0.00 0.00 0.00 3.53
955 2616 2.359975 GGGAGAGGGTGCGTTTGG 60.360 66.667 0.00 0.00 0.00 3.28
956 2617 1.376037 GAGGGAGAGGGTGCGTTTG 60.376 63.158 0.00 0.00 0.00 2.93
957 2618 2.593956 GGAGGGAGAGGGTGCGTTT 61.594 63.158 0.00 0.00 0.00 3.60
958 2619 3.003763 GGAGGGAGAGGGTGCGTT 61.004 66.667 0.00 0.00 0.00 4.84
1072 2733 2.029623 CGAAACGAATAGGGGAGGAGA 58.970 52.381 0.00 0.00 0.00 3.71
1082 2744 3.357021 CGAGACGGAATCGAAACGAATA 58.643 45.455 12.63 0.00 42.76 1.75
1238 2900 0.461516 TAGACGAGTCCGCTGACGAT 60.462 55.000 2.37 0.00 46.51 3.73
1319 2981 1.984066 TTCGGATCGGGTTTGGTTTT 58.016 45.000 0.00 0.00 0.00 2.43
1327 2989 1.153168 CCTGCATTTCGGATCGGGT 60.153 57.895 0.00 0.00 0.00 5.28
1473 3138 5.024555 GCTAAGCTTGCTGAAAATAAGACG 58.975 41.667 9.86 0.00 0.00 4.18
1515 3180 1.205893 GCAGAGGAGTCCTTGTACAGG 59.794 57.143 14.41 0.00 45.64 4.00
1618 3283 1.159285 CCGTCAAGCAAATGCAGAGA 58.841 50.000 8.28 0.00 45.16 3.10
1699 3364 2.953648 GACCTCTACACTAGGAAGCCTC 59.046 54.545 0.00 0.00 37.57 4.70
1772 3444 1.714794 ATCAGAACAAGCCTCGTTCG 58.285 50.000 5.22 2.18 45.93 3.95
1777 3449 2.087646 GACCCAATCAGAACAAGCCTC 58.912 52.381 0.00 0.00 0.00 4.70
1830 3502 4.331717 CAGCACACCTAAAAGTAATACCGG 59.668 45.833 0.00 0.00 0.00 5.28
1964 3640 5.181245 GCCACTAGCAGAAACATTAACTTGA 59.819 40.000 0.00 0.00 42.97 3.02
2278 3962 9.834628 GCAAACTATTAAGTACTTGTATGCAAA 57.165 29.630 18.56 2.82 33.75 3.68
2508 4194 6.372659 CCTGAACTGTCTGTGCATTTAACTAT 59.627 38.462 0.00 0.00 32.90 2.12
2521 4207 6.385033 GGAAATCAAAATCCTGAACTGTCTG 58.615 40.000 0.00 0.00 32.75 3.51
2522 4208 5.478332 GGGAAATCAAAATCCTGAACTGTCT 59.522 40.000 0.00 0.00 35.95 3.41
2566 4252 2.409948 ATCTTAGACAGGCACAAGGC 57.590 50.000 0.00 0.00 43.74 4.35
2567 4253 5.282055 TCATATCTTAGACAGGCACAAGG 57.718 43.478 0.00 0.00 0.00 3.61
2745 4438 4.397420 TCTTCACCATTTTAGCAAGCTCA 58.603 39.130 0.00 0.00 0.00 4.26
2911 4613 6.998673 ACCTTCTGGCAGTATAATTATCAACC 59.001 38.462 15.27 1.01 36.63 3.77
3001 4719 3.070446 TGACTCGCTTGAGAAAAGGGTAA 59.930 43.478 0.00 0.00 42.66 2.85
3014 4732 1.207329 GATACTGGGGTTGACTCGCTT 59.793 52.381 0.00 0.00 0.00 4.68
3042 4760 1.272037 TGAGCAATCAACCAGGCATCA 60.272 47.619 0.00 0.00 0.00 3.07
3094 4816 2.715046 TGAACCAACCAGATCTGATGC 58.285 47.619 24.62 10.07 0.00 3.91
3098 4820 3.087031 AGCAATGAACCAACCAGATCTG 58.913 45.455 16.24 16.24 0.00 2.90
3256 4978 1.680735 CTCTGCTATCAGACGAGCCTT 59.319 52.381 4.09 0.00 43.95 4.35
3315 5037 3.777522 CCATAAAGACCAGGAGGAGTTCT 59.222 47.826 0.00 0.00 38.69 3.01
3324 5046 2.684881 GCATGTGACCATAAAGACCAGG 59.315 50.000 0.00 0.00 0.00 4.45
4183 5908 0.539051 AGCCGTTTCATCCTCAGGAG 59.461 55.000 0.00 0.00 34.05 3.69
4203 5928 8.622157 GTCACAGCTACTATCTACAGATACAAA 58.378 37.037 0.00 0.00 36.05 2.83
4215 5940 3.308323 GCAGCAAAGTCACAGCTACTATC 59.692 47.826 0.00 0.00 36.73 2.08
4279 6004 3.126000 GGTCTTTTCAAGATCTGCTTCGG 59.874 47.826 0.00 0.00 40.18 4.30
4334 6059 2.816087 GCTCAAGATTTCTTCAGGCACA 59.184 45.455 0.00 0.00 33.11 4.57
4893 6621 0.375106 GCAAGACGAGTATTGGCTGC 59.625 55.000 11.79 0.00 36.16 5.25
4942 6670 6.017933 GCTATTTTGACACATTCAGAAGTCG 58.982 40.000 0.00 0.00 32.10 4.18
4945 6673 6.906659 ACTGCTATTTTGACACATTCAGAAG 58.093 36.000 0.00 0.00 32.10 2.85
4998 6726 2.079088 TTTCCCCCTGTCATGCTGCA 62.079 55.000 4.13 4.13 0.00 4.41
5003 6731 3.301794 TCATGATTTCCCCCTGTCATG 57.698 47.619 7.65 7.65 45.73 3.07
5084 6812 0.250640 ACCTGCACTGCTTCCTCAAG 60.251 55.000 1.98 0.00 0.00 3.02
5243 6972 3.310227 CAGTCTACTACTACTGGAGTGCG 59.690 52.174 1.88 0.00 39.39 5.34
5260 6989 9.656323 TCTGGATGGTAAATATTACTACAGTCT 57.344 33.333 0.00 0.00 0.00 3.24
5296 7025 2.230266 GTGTGGTGTGGAAACAACAAGT 59.770 45.455 0.00 0.00 46.06 3.16
5297 7026 2.730715 CGTGTGGTGTGGAAACAACAAG 60.731 50.000 0.00 0.00 46.06 3.16
5313 7042 2.326550 GTTGGCGTTCCACGTGTG 59.673 61.111 15.65 6.24 44.73 3.82
5314 7043 2.898343 GGTTGGCGTTCCACGTGT 60.898 61.111 15.65 0.00 44.73 4.49
5315 7044 2.590575 AGGTTGGCGTTCCACGTG 60.591 61.111 9.08 9.08 44.73 4.49
5316 7045 2.590575 CAGGTTGGCGTTCCACGT 60.591 61.111 0.00 0.00 44.73 4.49
5317 7046 1.234615 ATTCAGGTTGGCGTTCCACG 61.235 55.000 0.00 0.00 43.33 4.94
5318 7047 0.240945 CATTCAGGTTGGCGTTCCAC 59.759 55.000 0.00 0.00 43.33 4.02
5319 7048 0.109532 TCATTCAGGTTGGCGTTCCA 59.890 50.000 0.00 0.00 41.55 3.53
5321 7050 2.228822 ACATTCATTCAGGTTGGCGTTC 59.771 45.455 0.00 0.00 0.00 3.95
5323 7052 1.909700 ACATTCATTCAGGTTGGCGT 58.090 45.000 0.00 0.00 0.00 5.68
5324 7053 2.988493 CAAACATTCATTCAGGTTGGCG 59.012 45.455 0.00 0.00 0.00 5.69
5325 7054 2.738314 GCAAACATTCATTCAGGTTGGC 59.262 45.455 0.00 0.00 33.51 4.52
5326 7055 3.991773 CAGCAAACATTCATTCAGGTTGG 59.008 43.478 0.00 0.00 0.00 3.77
5327 7056 3.991773 CCAGCAAACATTCATTCAGGTTG 59.008 43.478 0.00 0.00 0.00 3.77
5346 7075 6.759356 ACCTGTTTTTATTTTCCGAAAACCAG 59.241 34.615 8.46 7.87 40.65 4.00
5493 7225 1.978617 CAGGTGCCGCCATTTCCTT 60.979 57.895 0.00 0.00 40.61 3.36
5554 7286 5.879223 GGGAAATGCACTCTCCATATATGAG 59.121 44.000 14.54 9.52 0.00 2.90
5612 7344 0.110644 CAGACACGCGGAGAAAAAGC 60.111 55.000 12.47 0.00 0.00 3.51
5614 7346 0.934496 CACAGACACGCGGAGAAAAA 59.066 50.000 12.47 0.00 0.00 1.94
5915 7647 3.665675 ATGCCGAAGAGGACGTGCC 62.666 63.158 2.38 0.00 45.00 5.01
6120 7852 1.069906 CATAATTACGCGCTCCCAAGC 60.070 52.381 5.73 0.00 45.56 4.01
6150 7882 9.959749 GCATAATTATCCCGTCAAAATAAGAAA 57.040 29.630 0.00 0.00 0.00 2.52
6153 7885 7.744715 GTCGCATAATTATCCCGTCAAAATAAG 59.255 37.037 12.28 0.00 0.00 1.73
6234 7999 2.417719 GCTCTCACAAAACCTCATCGT 58.582 47.619 0.00 0.00 0.00 3.73
6238 8003 2.957402 ATGGCTCTCACAAAACCTCA 57.043 45.000 0.00 0.00 0.00 3.86
6314 8079 0.608130 TGCGACCACTGAGTAGCATT 59.392 50.000 6.36 0.00 42.41 3.56
6315 8080 2.276869 TGCGACCACTGAGTAGCAT 58.723 52.632 6.36 0.00 42.41 3.79
6316 8081 1.289066 GTGCGACCACTGAGTAGCA 59.711 57.895 6.36 6.36 44.60 3.49
6395 8166 5.190528 TCCTTCTCTTGGCATCTCTTGTAAT 59.809 40.000 0.00 0.00 0.00 1.89
6431 8202 3.000819 CGGGTGTGGCCAGAGGTA 61.001 66.667 5.11 0.00 39.65 3.08
6533 8306 2.792947 GCGGTCCTGCGGGAGATTA 61.793 63.158 16.70 0.00 43.12 1.75
6554 8327 4.574674 AAAGCACCTCCTCATGTGATTA 57.425 40.909 0.00 0.00 39.92 1.75
6557 8330 2.886523 CAAAAAGCACCTCCTCATGTGA 59.113 45.455 0.00 0.00 34.37 3.58
6561 8334 3.068590 CACAACAAAAAGCACCTCCTCAT 59.931 43.478 0.00 0.00 0.00 2.90
6685 8458 2.750657 GGTGGCTGCAGGCTAGGAT 61.751 63.158 36.39 0.00 41.69 3.24
6792 8569 4.852138 CGGAGCACATTTTGATCTAATGG 58.148 43.478 18.85 12.03 40.75 3.16
6826 8603 1.884579 CTGCTTCATCTGTTTGCAGGT 59.115 47.619 0.00 0.00 44.95 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.