AutoCloner

Multiple sequence alignment - TraesCS2B01G404700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2B01G404700	chr2B	100.000	2711	0	0	1	2711	572679792	572677082	0.000000e+00	5007.0
1	TraesCS2B01G404700	chr2B	100.000	29	0	0	817	845	572678914	572678886	1.000000e-03	54.7
2	TraesCS2B01G404700	chr2B	100.000	29	0	0	879	907	572678976	572678948	1.000000e-03	54.7
3	TraesCS2B01G404700	chr2A	95.011	942	44	1	847	1785	632929331	632928390	0.000000e+00	1476.0
4	TraesCS2B01G404700	chr2A	83.369	938	57	43	1783	2711	632928354	632927507	0.000000e+00	776.0
5	TraesCS2B01G404700	chr2A	87.006	177	8	7	650	818	632929645	632929476	4.610000e-43	185.0
6	TraesCS2B01G404700	chr2D	90.506	969	47	20	1	930	488365441	488364479	0.000000e+00	1238.0
7	TraesCS2B01G404700	chr2D	93.961	828	34	2	966	1793	488472542	488471731	0.000000e+00	1238.0
8	TraesCS2B01G404700	chr2D	89.825	973	50	21	1	930	488473503	488472537	0.000000e+00	1203.0
9	TraesCS2B01G404700	chr2D	93.513	817	37	2	970	1785	488364478	488363677	0.000000e+00	1201.0
10	TraesCS2B01G404700	chr2D	84.295	312	32	5	2401	2709	488363053	488362756	3.420000e-74	289.0
11	TraesCS2B01G404700	chr2D	82.988	241	16	12	1785	2017	488471704	488471481	7.660000e-46	195.0
12	TraesCS2B01G404700	chr2D	100.000	30	0	0	817	846	488364528	488364499	3.770000e-04	56.5
13	TraesCS2B01G404700	chr2D	100.000	30	0	0	817	846	488472586	488472557	3.770000e-04	56.5
14	TraesCS2B01G404700	chr6B	83.396	530	77	9	1151	1673	515022064	515022589	5.250000e-132	481.0
15	TraesCS2B01G404700	chr6B	90.323	62	3	3	505	565	57413737	57413678	8.050000e-11	78.7
16	TraesCS2B01G404700	chr6D	82.569	545	69	20	1151	1673	311582633	311582093	8.850000e-125	457.0
17	TraesCS2B01G404700	chr6D	97.842	139	3	0	1383	1521	414098779	414098917	9.700000e-60	241.0
18	TraesCS2B01G404700	chr6D	100.000	47	0	0	508	554	427344944	427344898	1.340000e-13	87.9
19	TraesCS2B01G404700	chr1B	96.800	250	8	0	1282	1531	378858372	378858123	4.170000e-113	418.0
20	TraesCS2B01G404700	chr6A	81.818	517	69	15	1151	1644	448351816	448351302	6.990000e-111	411.0
21	TraesCS2B01G404700	chr6A	100.000	47	0	0	508	554	572128777	572128731	1.340000e-13	87.9
22	TraesCS2B01G404700	chr7D	82.108	408	57	13	1151	1544	126880290	126879885	4.330000e-88	335.0
23	TraesCS2B01G404700	chr7D	94.545	55	2	1	501	554	92229160	92229214	1.730000e-12	84.2
24	TraesCS2B01G404700	chr5A	93.966	116	7	0	1371	1486	540474874	540474989	2.770000e-40	176.0
25	TraesCS2B01G404700	chr4A	76.961	204	40	5	1174	1372	503236421	503236220	2.850000e-20	110.0
26	TraesCS2B01G404700	chr1A	100.000	47	0	0	508	554	533694066	533694020	1.340000e-13	87.9
27	TraesCS2B01G404700	chr7B	89.706	68	5	2	507	574	736755856	736755791	4.810000e-13	86.1
28	TraesCS2B01G404700	chr4B	92.982	57	3	1	505	560	42939396	42939340	6.220000e-12	82.4

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2B01G404700	chr2B	572677082	572679792	2710	True	1705.466667	5007	100.0000	1	2711	3	chr2B.!!$R1	2710
1	TraesCS2B01G404700	chr2A	632927507	632929645	2138	True	812.333333	1476	88.4620	650	2711	3	chr2A.!!$R1	2061
2	TraesCS2B01G404700	chr2D	488362756	488365441	2685	True	696.125000	1238	92.0785	1	2709	4	chr2D.!!$R1	2708
3	TraesCS2B01G404700	chr2D	488471481	488473503	2022	True	673.125000	1238	91.6935	1	2017	4	chr2D.!!$R2	2016
4	TraesCS2B01G404700	chr6B	515022064	515022589	525	False	481.000000	481	83.3960	1151	1673	1	chr6B.!!$F1	522
5	TraesCS2B01G404700	chr6D	311582093	311582633	540	True	457.000000	457	82.5690	1151	1673	1	chr6D.!!$R1	522
6	TraesCS2B01G404700	chr6A	448351302	448351816	514	True	411.000000	411	81.8180	1151	1644	1	chr6A.!!$R1	493

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
281	285	0.107643	TGTGAAAGGATGACGTGCCA	59.892	50.0	0.0	0.0	0.0	4.92	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1964	2215	0.741221	CCGGCTAGTTTCAGAGGTGC	60.741	60.0	0.0	0.0	0.0	5.01	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
59	60	4.442706	AGATGGACCTAACTAATTGCACG	58.557	43.478	0.00	0.00	0.00	5.34
76	77	7.609760	ATTGCACGTGTAATTAAATCTCTGA	57.390	32.000	23.86	0.00	0.00	3.27
120	124	7.754924	TGATTTGATTTTCTAATTTCGGTGCTC	59.245	33.333	0.00	0.00	0.00	4.26
133	137	2.050691	CGGTGCTCGGTTTCAAATTTG	58.949	47.619	12.15	12.15	34.75	2.32
145	149	6.292381	CGGTTTCAAATTTGTTTCCGCATTAA	60.292	34.615	24.42	7.34	32.85	1.40
178	182	3.924073	TGAAACCACGACATATCAACTCG	59.076	43.478	0.00	0.00	0.00	4.18
248	252	6.311200	GCGCTCAGTTTCCAAATTATTTTCAT	59.689	34.615	0.00	0.00	0.00	2.57
264	268	5.804692	TTTTCATATTAATGACCGCGTGT	57.195	34.783	4.92	1.93	41.87	4.49
270	274	1.434555	TAATGACCGCGTGTGAAAGG	58.565	50.000	4.92	0.00	0.00	3.11
281	285	0.107643	TGTGAAAGGATGACGTGCCA	59.892	50.000	0.00	0.00	0.00	4.92
282	286	1.234821	GTGAAAGGATGACGTGCCAA	58.765	50.000	0.00	0.00	0.00	4.52
296	300	1.135689	GTGCCAACTGCCGTTTCATAG	60.136	52.381	0.00	0.00	40.16	2.23
354	359	7.683676	CGGTGCTTGATTTTCAAATTATTTTCG	59.316	33.333	0.00	0.00	35.73	3.46
391	396	3.270877	GCGAAAGGATGATGTACCAACT	58.729	45.455	0.00	0.00	0.00	3.16
452	457	4.327982	TGATTTGGCGATTGGTTTTCAA	57.672	36.364	0.00	0.00	40.01	2.69
453	458	4.697514	TGATTTGGCGATTGGTTTTCAAA	58.302	34.783	0.00	0.00	39.05	2.69
508	513	4.620589	TGACATACCAACTCCCGTTTAA	57.379	40.909	0.00	0.00	0.00	1.52
519	524	4.876580	ACTCCCGTTTAATAGTACTCCCT	58.123	43.478	0.00	0.00	0.00	4.20
539	544	7.564292	ACTCCCTCCGTAAAGAAATATAAGAGT	59.436	37.037	0.00	0.00	0.00	3.24
836	957	3.047877	GTGTGGCCGGCACACTAC	61.048	66.667	37.66	28.07	46.64	2.73
837	958	3.238497	TGTGGCCGGCACACTACT	61.238	61.111	33.43	0.00	39.52	2.57
838	959	2.434359	GTGGCCGGCACACTACTC	60.434	66.667	30.85	8.62	35.98	2.59
839	960	2.920384	TGGCCGGCACACTACTCA	60.920	61.111	30.85	11.59	0.00	3.41
841	962	2.125512	GCCGGCACACTACTCAGG	60.126	66.667	24.80	0.00	0.00	3.86
842	963	2.943978	GCCGGCACACTACTCAGGT	61.944	63.158	24.80	0.00	0.00	4.00
845	988	0.885879	CGGCACACTACTCAGGTACA	59.114	55.000	0.00	0.00	0.00	2.90
935	1078	1.503542	CACATTCTGCTTCCCGCAC	59.496	57.895	0.00	0.00	45.47	5.34
958	1101	0.756903	ATTTCCCGTCCCGATCGATT	59.243	50.000	18.66	0.00	0.00	3.34
961	1104	2.661866	CCGTCCCGATCGATTGGC	60.662	66.667	24.40	11.96	0.00	4.52
976	1122	1.485294	TTGGCCCGTGCTTCCTCTTA	61.485	55.000	0.00	0.00	37.74	2.10
989	1135	4.036971	GCTTCCTCTTAAGTAGCTCGATCA	59.963	45.833	1.63	0.00	0.00	2.92
1014	1160	1.586422	GATCCATGGACCATCACGTG	58.414	55.000	18.99	9.94	0.00	4.49
1015	1161	1.138859	GATCCATGGACCATCACGTGA	59.861	52.381	22.48	22.48	0.00	4.35
1110	1271	4.918201	GAGGCGGCCGATCCCAAG	62.918	72.222	33.48	0.00	0.00	3.61
1794	2019	3.648067	AGAGCTAGCTATGGTTAATGGCA	59.352	43.478	19.38	0.00	44.89	4.92
1957	2185	9.783081	TCTCATGGTCGTACTGTATTATACTTA	57.217	33.333	3.92	0.00	0.00	2.24
1977	2228	6.476378	ACTTATATGTTGCACCTCTGAAACT	58.524	36.000	0.00	0.00	0.00	2.66
1994	2249	3.724732	AACTAGCCGGTAAAATGGGAA	57.275	42.857	1.90	0.00	0.00	3.97
2029	2285	4.957759	ATGCTAAAAGTTAAACGGCGAT	57.042	36.364	16.62	0.00	0.00	4.58
2083	2339	5.998454	TGAGTTTCAGCAGAAGAAAGAAG	57.002	39.130	0.00	0.00	35.81	2.85
2113	2369	1.656441	GTATCCGCGACCGTGGTAT	59.344	57.895	19.69	14.26	45.37	2.73
2114	2370	0.874390	GTATCCGCGACCGTGGTATA	59.126	55.000	19.69	13.44	45.37	1.47
2115	2371	0.874390	TATCCGCGACCGTGGTATAC	59.126	55.000	19.69	0.00	45.37	1.47
2231	2517	7.462571	TTTTAGATCTTTTTCTAGGGGTTGC	57.537	36.000	0.00	0.00	30.20	4.17
2253	2539	2.675658	TTTTTGAGGGGTTGCTAGCT	57.324	45.000	17.23	0.00	0.00	3.32
2310	2596	4.012374	TCTTTCATCTTGGGCTGCTTTAG	58.988	43.478	0.00	0.00	0.00	1.85
2373	2662	7.194607	TGAGCAAGAATAACTGAACAAGAAG	57.805	36.000	0.00	0.00	0.00	2.85
2374	2663	6.767902	TGAGCAAGAATAACTGAACAAGAAGT	59.232	34.615	0.00	0.00	0.00	3.01
2375	2664	7.283127	TGAGCAAGAATAACTGAACAAGAAGTT	59.717	33.333	0.00	0.00	44.93	2.66
2376	2665	7.420800	AGCAAGAATAACTGAACAAGAAGTTG	58.579	34.615	0.00	0.00	41.51	3.16
2377	2666	6.142958	GCAAGAATAACTGAACAAGAAGTTGC	59.857	38.462	0.00	0.00	41.51	4.17
2378	2667	7.420800	CAAGAATAACTGAACAAGAAGTTGCT	58.579	34.615	0.00	0.00	41.51	3.91
2379	2668	7.195839	AGAATAACTGAACAAGAAGTTGCTC	57.804	36.000	0.00	0.00	41.51	4.26
2426	2715	5.532779	ACACTTCCTTCTCAAAATGTTCTCC	59.467	40.000	0.00	0.00	0.00	3.71
2455	2769	3.848272	AAAAACATGTGATACCGGCAG	57.152	42.857	0.00	0.00	0.00	4.85
2484	2798	7.963465	ACACTTATTAGATACGCGATACATCAG	59.037	37.037	15.93	5.50	0.00	2.90
2495	2809	3.245284	GCGATACATCAGCACATTTACGT	59.755	43.478	0.00	0.00	0.00	3.57
2556	2871	0.749454	GGGCAATCTGGAACGAGCAT	60.749	55.000	0.00	0.00	0.00	3.79
2567	2882	3.706140	CGAGCATAACCCTCGTGC	58.294	61.111	2.90	0.00	45.17	5.34
2585	2900	1.830477	TGCCTTCCACAACAAAGCTTT	59.170	42.857	5.69	5.69	0.00	3.51
2605	2920	3.351794	TGCCGTCCCACATAATTGTAA	57.648	42.857	0.00	0.00	33.76	2.41
2634	2949	1.001487	CGCAATGAAGCCACAAACTGA	60.001	47.619	0.00	0.00	0.00	3.41
2643	2958	2.837498	GCCACAAACTGAAAATTGGCT	58.163	42.857	3.13	0.00	45.07	4.75
2688	3003	3.055094	TCATGTTGGGAGAGTAGGCTTTC	60.055	47.826	0.00	0.00	0.00	2.62
2689	3004	2.621070	TGTTGGGAGAGTAGGCTTTCT	58.379	47.619	0.00	0.00	0.00	2.52
2690	3005	3.786553	TGTTGGGAGAGTAGGCTTTCTA	58.213	45.455	0.00	0.00	0.00	2.10

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
38	39	4.034048	CACGTGCAATTAGTTAGGTCCATC	59.966	45.833	0.82	0.00	0.00	3.51
44	45	9.997482	ATTTAATTACACGTGCAATTAGTTAGG	57.003	29.630	25.31	0.00	30.50	2.69
49	50	9.425893	CAGAGATTTAATTACACGTGCAATTAG	57.574	33.333	25.31	13.74	30.50	1.73
53	54	6.425417	TGTCAGAGATTTAATTACACGTGCAA	59.575	34.615	17.22	10.10	0.00	4.08
97	98	6.083630	CGAGCACCGAAATTAGAAAATCAAA	58.916	36.000	0.00	0.00	41.76	2.69
107	108	2.768698	TGAAACCGAGCACCGAAATTA	58.231	42.857	0.00	0.00	41.76	1.40
120	124	2.860735	TGCGGAAACAAATTTGAAACCG	59.139	40.909	29.76	29.76	40.24	4.44
133	137	3.485947	TGCAGACATTAATGCGGAAAC	57.514	42.857	15.48	1.65	45.54	2.78
145	149	1.536766	CGTGGTTTCACATGCAGACAT	59.463	47.619	0.00	0.00	43.79	3.06
248	252	3.619483	CCTTTCACACGCGGTCATTAATA	59.381	43.478	12.47	0.00	0.00	0.98
264	268	1.202758	AGTTGGCACGTCATCCTTTCA	60.203	47.619	0.00	0.00	0.00	2.69
281	285	8.639761	ACTAATCTATACTATGAAACGGCAGTT	58.360	33.333	0.00	0.00	43.50	3.16
282	286	8.082852	CACTAATCTATACTATGAAACGGCAGT	58.917	37.037	0.00	0.00	0.00	4.40
354	359	5.295787	TCCTTTCGCACACATCCATTAATAC	59.704	40.000	0.00	0.00	0.00	1.89
479	484	5.820423	CGGGAGTTGGTATGTCATTATTTCA	59.180	40.000	0.00	0.00	0.00	2.69
508	513	8.953223	ATATTTCTTTACGGAGGGAGTACTAT	57.047	34.615	0.00	0.00	0.00	2.12
539	544	8.786826	AATCAATTCCGTTAGTGATCTAAACA	57.213	30.769	0.00	0.00	37.81	2.83
828	949	3.427773	GCTAGTGTACCTGAGTAGTGTGC	60.428	52.174	0.00	0.00	0.00	4.57
834	955	2.795231	ACCGCTAGTGTACCTGAGTA	57.205	50.000	1.99	0.00	0.00	2.59
835	956	1.920610	AACCGCTAGTGTACCTGAGT	58.079	50.000	1.99	0.00	0.00	3.41
836	957	2.416972	GGAAACCGCTAGTGTACCTGAG	60.417	54.545	1.99	0.00	0.00	3.35
837	958	1.547372	GGAAACCGCTAGTGTACCTGA	59.453	52.381	1.99	0.00	0.00	3.86
838	959	1.274167	TGGAAACCGCTAGTGTACCTG	59.726	52.381	1.99	0.00	0.00	4.00
839	960	1.549170	CTGGAAACCGCTAGTGTACCT	59.451	52.381	1.99	0.00	0.00	3.08
841	962	2.738013	ACTGGAAACCGCTAGTGTAC	57.262	50.000	1.99	0.00	0.00	2.90
842	963	6.528537	TTTATACTGGAAACCGCTAGTGTA	57.471	37.500	1.99	0.00	0.00	2.90
845	988	6.463472	GGGTATTTATACTGGAAACCGCTAGT	60.463	42.308	0.00	0.00	33.81	2.57
958	1101	1.485294	TTAAGAGGAAGCACGGGCCA	61.485	55.000	5.73	0.00	42.56	5.36
961	1104	2.738964	GCTACTTAAGAGGAAGCACGGG	60.739	54.545	10.09	0.00	36.54	5.28
976	1122	2.457598	TCCAAGGTGATCGAGCTACTT	58.542	47.619	0.90	3.34	0.00	2.24
989	1135	1.496429	GATGGTCCATGGATCCAAGGT	59.504	52.381	30.29	15.12	36.33	3.50
1014	1160	3.695606	TGCACGTGGGAGGAGCTC	61.696	66.667	18.88	4.71	0.00	4.09
1015	1161	4.008933	GTGCACGTGGGAGGAGCT	62.009	66.667	18.88	0.00	0.00	4.09
1149	1310	1.376683	GGCCATGTAGTTGACGCCA	60.377	57.895	0.00	0.00	33.52	5.69
1794	2019	6.268847	GGACATCTCTACTCAAGATATGGGTT	59.731	42.308	5.66	0.00	41.01	4.11
1806	2031	2.865079	TGATCCGGGACATCTCTACTC	58.135	52.381	0.00	0.00	0.00	2.59
1816	2041	1.066143	ACACACAGATTGATCCGGGAC	60.066	52.381	0.00	0.00	0.00	4.46
1848	2073	6.817184	AGCCATTACACTATATATAAGCCGG	58.183	40.000	0.00	0.00	0.00	6.13
1957	2185	4.878397	GCTAGTTTCAGAGGTGCAACATAT	59.122	41.667	3.64	0.00	39.98	1.78
1959	2187	3.077359	GCTAGTTTCAGAGGTGCAACAT	58.923	45.455	3.64	0.00	39.98	2.71
1960	2188	2.494059	GCTAGTTTCAGAGGTGCAACA	58.506	47.619	3.64	0.00	39.98	3.33
1964	2215	0.741221	CCGGCTAGTTTCAGAGGTGC	60.741	60.000	0.00	0.00	0.00	5.01
1977	2228	1.554160	TCGTTCCCATTTTACCGGCTA	59.446	47.619	0.00	0.00	0.00	3.93
1994	2249	3.822594	TTAGCATTTCGTTGCAATCGT	57.177	38.095	16.97	4.21	45.23	3.73
2048	2304	6.142139	TGCTGAAACTCAAACATATGTTTCG	58.858	36.000	27.12	22.28	45.54	3.46
2056	2312	6.319658	TCTTTCTTCTGCTGAAACTCAAACAT	59.680	34.615	7.48	0.00	31.21	2.71
2057	2313	5.647658	TCTTTCTTCTGCTGAAACTCAAACA	59.352	36.000	7.48	0.00	31.21	2.83
2063	2319	3.249559	CGCTTCTTTCTTCTGCTGAAACT	59.750	43.478	7.48	0.00	31.21	2.66
2113	2369	2.092212	ACGAGGGATCTACGGAAAGGTA	60.092	50.000	0.00	0.00	0.00	3.08
2114	2370	1.341778	ACGAGGGATCTACGGAAAGGT	60.342	52.381	0.00	0.00	0.00	3.50
2115	2371	1.337387	GACGAGGGATCTACGGAAAGG	59.663	57.143	0.00	0.00	0.00	3.11
2274	2560	1.623311	TGAAAGAGGCCGAAGATGTCA	59.377	47.619	0.00	0.00	0.00	3.58
2332	2618	2.086869	CTCATGAATGCCGGTTTGACT	58.913	47.619	1.90	0.00	0.00	3.41
2385	2674	5.709966	GAAGTGTTTCCTGTTCAGTTTGTT	58.290	37.500	0.00	0.00	0.00	2.83
2426	2715	8.431593	CCGGTATCACATGTTTTTATTTTTGTG	58.568	33.333	0.00	0.00	36.64	3.33
2455	2769	7.073883	TGTATCGCGTATCTAATAAGTGTCAC	58.926	38.462	5.77	0.00	0.00	3.67
2484	2798	8.363029	GCTAATTCTGTAAAAACGTAAATGTGC	58.637	33.333	0.00	0.00	0.00	4.57
2536	2851	2.464459	GCTCGTTCCAGATTGCCCG	61.464	63.158	0.00	0.00	0.00	6.13
2556	2871	1.122632	TGTGGAAGGCACGAGGGTTA	61.123	55.000	0.00	0.00	0.00	2.85
2567	2882	2.204237	GCAAAGCTTTGTTGTGGAAGG	58.796	47.619	33.47	10.62	40.24	3.46
2585	2900	3.011119	GTTACAATTATGTGGGACGGCA	58.989	45.455	0.00	0.00	40.84	5.69
2605	2920	2.017049	GGCTTCATTGCGGATACAAGT	58.983	47.619	0.00	0.00	31.96	3.16
2634	2949	4.066646	ACGTTTTGCCTTAGCCAATTTT	57.933	36.364	0.00	0.00	38.69	1.82
2643	2958	1.112113	TGCCCAAACGTTTTGCCTTA	58.888	45.000	22.64	7.85	0.00	2.69
2653	2968	2.598589	CAACATGAGATTGCCCAAACG	58.401	47.619	0.00	0.00	0.00	3.60
2654	2969	2.354003	CCCAACATGAGATTGCCCAAAC	60.354	50.000	0.00	0.00	0.00	2.93
2688	3003	3.440173	ACTCCCAAATGCGTGACAATTAG	59.560	43.478	0.00	0.00	0.00	1.73
2689	3004	3.417101	ACTCCCAAATGCGTGACAATTA	58.583	40.909	0.00	0.00	0.00	1.40
2690	3005	2.238521	ACTCCCAAATGCGTGACAATT	58.761	42.857	0.00	0.00	0.00	2.32

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.