Multiple sequence alignment - TraesCS2B01G403500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G403500 chr2B 100.000 2861 0 0 1 2861 571945609 571948469 0 5284
1 TraesCS2B01G403500 chr7A 98.715 2257 29 0 605 2861 345261290 345263546 0 4008
2 TraesCS2B01G403500 chr1B 98.758 2255 26 2 607 2861 322392626 322394878 0 4008
3 TraesCS2B01G403500 chr3A 98.540 2261 28 3 605 2860 457924734 457926994 0 3988
4 TraesCS2B01G403500 chr3A 97.585 2277 32 10 605 2861 11577134 11579407 0 3879
5 TraesCS2B01G403500 chr6B 98.841 2157 25 0 607 2763 568189369 568191525 0 3845
6 TraesCS2B01G403500 chr1A 97.472 2176 34 2 638 2813 113882216 113884370 0 3694
7 TraesCS2B01G403500 chr3B 95.360 2263 77 14 616 2858 139621351 139623605 0 3572
8 TraesCS2B01G403500 chr4A 97.592 2076 31 9 805 2861 705572674 705570599 0 3539
9 TraesCS2B01G403500 chr4B 98.101 1527 18 7 606 2129 134586679 134585161 0 2649
10 TraesCS2B01G403500 chr4B 98.949 761 8 0 2101 2861 134585244 134584484 0 1362
11 TraesCS2B01G403500 chr2A 94.362 603 21 6 6 608 773353239 773353828 0 913
12 TraesCS2B01G403500 chr2D 91.626 609 22 4 1 608 646072239 646071659 0 815


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G403500 chr2B 571945609 571948469 2860 False 5284.0 5284 100.000 1 2861 1 chr2B.!!$F1 2860
1 TraesCS2B01G403500 chr7A 345261290 345263546 2256 False 4008.0 4008 98.715 605 2861 1 chr7A.!!$F1 2256
2 TraesCS2B01G403500 chr1B 322392626 322394878 2252 False 4008.0 4008 98.758 607 2861 1 chr1B.!!$F1 2254
3 TraesCS2B01G403500 chr3A 457924734 457926994 2260 False 3988.0 3988 98.540 605 2860 1 chr3A.!!$F2 2255
4 TraesCS2B01G403500 chr3A 11577134 11579407 2273 False 3879.0 3879 97.585 605 2861 1 chr3A.!!$F1 2256
5 TraesCS2B01G403500 chr6B 568189369 568191525 2156 False 3845.0 3845 98.841 607 2763 1 chr6B.!!$F1 2156
6 TraesCS2B01G403500 chr1A 113882216 113884370 2154 False 3694.0 3694 97.472 638 2813 1 chr1A.!!$F1 2175
7 TraesCS2B01G403500 chr3B 139621351 139623605 2254 False 3572.0 3572 95.360 616 2858 1 chr3B.!!$F1 2242
8 TraesCS2B01G403500 chr4A 705570599 705572674 2075 True 3539.0 3539 97.592 805 2861 1 chr4A.!!$R1 2056
9 TraesCS2B01G403500 chr4B 134584484 134586679 2195 True 2005.5 2649 98.525 606 2861 2 chr4B.!!$R1 2255
10 TraesCS2B01G403500 chr2A 773353239 773353828 589 False 913.0 913 94.362 6 608 1 chr2A.!!$F1 602
11 TraesCS2B01G403500 chr2D 646071659 646072239 580 True 815.0 815 91.626 1 608 1 chr2D.!!$R1 607

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
274 275 0.027194 CCTGCGCAATTCTGTGATCG 59.973 55.0 13.05 0.00 34.83 3.69 F
285 286 0.027194 CTGTGATCGCGATGGCTTTG 59.973 55.0 29.09 7.63 36.88 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1724 1963 3.219176 TCATGATCATGGCCTTCCTTC 57.781 47.619 30.54 0.0 39.24 3.46 R
2433 2815 6.239217 ACTGTTGTATCTATGGCAATCTGA 57.761 37.500 0.00 0.0 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.058293 TGCGCAATTCTGTTCTCGAATTT 60.058 39.130 8.16 0.00 38.62 1.82
37 38 3.539954 GCGCAATTCTGTTCTCGAATTTC 59.460 43.478 0.30 0.00 38.62 2.17
38 39 3.775610 CGCAATTCTGTTCTCGAATTTCG 59.224 43.478 12.54 12.54 39.61 3.46
39 40 4.666655 CGCAATTCTGTTCTCGAATTTCGT 60.667 41.667 17.61 0.00 40.24 3.85
40 41 4.783540 GCAATTCTGTTCTCGAATTTCGTC 59.216 41.667 17.61 8.36 41.35 4.20
41 42 4.824848 ATTCTGTTCTCGAATTTCGTCG 57.175 40.909 17.61 10.68 41.35 5.12
42 43 3.278367 TCTGTTCTCGAATTTCGTCGT 57.722 42.857 17.61 0.00 41.35 4.34
43 44 2.977829 TCTGTTCTCGAATTTCGTCGTG 59.022 45.455 17.61 7.79 41.35 4.35
44 45 1.454276 TGTTCTCGAATTTCGTCGTGC 59.546 47.619 17.61 7.26 41.35 5.34
45 46 0.706184 TTCTCGAATTTCGTCGTGCG 59.294 50.000 17.61 2.70 41.35 5.34
46 47 0.386352 TCTCGAATTTCGTCGTGCGT 60.386 50.000 17.61 0.00 41.35 5.24
47 48 0.433492 CTCGAATTTCGTCGTGCGTT 59.567 50.000 17.61 0.00 41.35 4.84
48 49 0.431984 TCGAATTTCGTCGTGCGTTC 59.568 50.000 17.61 0.00 41.35 3.95
49 50 0.433492 CGAATTTCGTCGTGCGTTCT 59.567 50.000 10.61 0.00 42.13 3.01
50 51 1.136721 CGAATTTCGTCGTGCGTTCTT 60.137 47.619 10.61 0.00 42.13 2.52
51 52 2.222624 GAATTTCGTCGTGCGTTCTTG 58.777 47.619 0.00 0.00 42.13 3.02
52 53 1.493772 ATTTCGTCGTGCGTTCTTGA 58.506 45.000 0.00 0.00 42.13 3.02
53 54 1.493772 TTTCGTCGTGCGTTCTTGAT 58.506 45.000 0.00 0.00 42.13 2.57
54 55 1.057636 TTCGTCGTGCGTTCTTGATC 58.942 50.000 0.00 0.00 42.13 2.92
55 56 0.240145 TCGTCGTGCGTTCTTGATCT 59.760 50.000 0.00 0.00 42.13 2.75
56 57 0.363512 CGTCGTGCGTTCTTGATCTG 59.636 55.000 0.00 0.00 35.54 2.90
57 58 1.698165 GTCGTGCGTTCTTGATCTGA 58.302 50.000 0.00 0.00 0.00 3.27
58 59 2.058798 GTCGTGCGTTCTTGATCTGAA 58.941 47.619 0.00 0.00 0.00 3.02
59 60 2.475111 GTCGTGCGTTCTTGATCTGAAA 59.525 45.455 0.00 0.00 0.00 2.69
60 61 3.123621 GTCGTGCGTTCTTGATCTGAAAT 59.876 43.478 0.00 0.00 0.00 2.17
61 62 3.745975 TCGTGCGTTCTTGATCTGAAATT 59.254 39.130 0.00 0.00 0.00 1.82
62 63 4.213270 TCGTGCGTTCTTGATCTGAAATTT 59.787 37.500 0.00 0.00 0.00 1.82
63 64 4.551126 CGTGCGTTCTTGATCTGAAATTTC 59.449 41.667 11.41 11.41 0.00 2.17
64 65 5.451908 GTGCGTTCTTGATCTGAAATTTCA 58.548 37.500 19.45 19.45 35.57 2.69
65 66 5.340667 GTGCGTTCTTGATCTGAAATTTCAC 59.659 40.000 16.91 8.39 32.90 3.18
66 67 4.853743 GCGTTCTTGATCTGAAATTTCACC 59.146 41.667 16.91 9.57 32.90 4.02
67 68 5.082059 CGTTCTTGATCTGAAATTTCACCG 58.918 41.667 16.91 8.77 32.90 4.94
68 69 5.334105 CGTTCTTGATCTGAAATTTCACCGT 60.334 40.000 16.91 5.92 32.90 4.83
69 70 5.611796 TCTTGATCTGAAATTTCACCGTG 57.388 39.130 16.91 7.71 32.90 4.94
70 71 5.304778 TCTTGATCTGAAATTTCACCGTGA 58.695 37.500 16.91 12.73 32.90 4.35
71 72 5.939883 TCTTGATCTGAAATTTCACCGTGAT 59.060 36.000 16.91 16.60 32.90 3.06
72 73 6.430925 TCTTGATCTGAAATTTCACCGTGATT 59.569 34.615 16.91 3.96 32.90 2.57
73 74 5.941733 TGATCTGAAATTTCACCGTGATTG 58.058 37.500 16.91 5.24 32.90 2.67
74 75 4.159377 TCTGAAATTTCACCGTGATTGC 57.841 40.909 16.91 0.00 32.90 3.56
75 76 2.910482 CTGAAATTTCACCGTGATTGCG 59.090 45.455 16.91 0.00 32.90 4.85
76 77 2.550180 TGAAATTTCACCGTGATTGCGA 59.450 40.909 16.91 0.00 31.01 5.10
77 78 3.190327 TGAAATTTCACCGTGATTGCGAT 59.810 39.130 16.91 0.00 31.01 4.58
78 79 3.405170 AATTTCACCGTGATTGCGATC 57.595 42.857 7.02 7.02 0.00 3.69
79 80 0.718904 TTTCACCGTGATTGCGATCG 59.281 50.000 11.69 11.69 34.91 3.69
80 81 0.389296 TTCACCGTGATTGCGATCGT 60.389 50.000 17.81 0.00 34.91 3.73
81 82 0.389296 TCACCGTGATTGCGATCGTT 60.389 50.000 17.81 1.75 34.91 3.85
82 83 0.442310 CACCGTGATTGCGATCGTTT 59.558 50.000 17.81 1.35 34.91 3.60
83 84 0.442310 ACCGTGATTGCGATCGTTTG 59.558 50.000 17.81 0.93 34.91 2.93
84 85 0.718904 CCGTGATTGCGATCGTTTGA 59.281 50.000 17.81 0.62 34.91 2.69
85 86 1.127766 CCGTGATTGCGATCGTTTGAA 59.872 47.619 17.81 5.30 34.91 2.69
86 87 2.421523 CGTGATTGCGATCGTTTGAAG 58.578 47.619 17.81 0.00 34.91 3.02
87 88 2.169179 GTGATTGCGATCGTTTGAAGC 58.831 47.619 17.81 8.10 34.91 3.86
88 89 2.076100 TGATTGCGATCGTTTGAAGCT 58.924 42.857 17.81 0.00 34.91 3.74
89 90 2.483877 TGATTGCGATCGTTTGAAGCTT 59.516 40.909 17.81 0.00 34.91 3.74
90 91 2.314561 TTGCGATCGTTTGAAGCTTG 57.685 45.000 17.81 0.00 34.28 4.01
91 92 1.507562 TGCGATCGTTTGAAGCTTGA 58.492 45.000 17.81 0.00 34.28 3.02
92 93 1.870402 TGCGATCGTTTGAAGCTTGAA 59.130 42.857 17.81 0.00 34.28 2.69
93 94 2.234187 GCGATCGTTTGAAGCTTGAAC 58.766 47.619 17.81 7.96 0.00 3.18
94 95 2.486128 CGATCGTTTGAAGCTTGAACG 58.514 47.619 26.63 26.63 45.32 3.95
98 99 3.319238 CGTTTGAAGCTTGAACGAACT 57.681 42.857 27.74 0.00 46.47 3.01
99 100 3.029074 CGTTTGAAGCTTGAACGAACTG 58.971 45.455 27.74 13.00 46.47 3.16
100 101 3.363178 GTTTGAAGCTTGAACGAACTGG 58.637 45.455 2.10 0.00 0.00 4.00
101 102 1.593196 TGAAGCTTGAACGAACTGGG 58.407 50.000 2.10 0.00 0.00 4.45
102 103 0.238553 GAAGCTTGAACGAACTGGGC 59.761 55.000 2.10 0.00 0.00 5.36
103 104 1.172812 AAGCTTGAACGAACTGGGCC 61.173 55.000 0.00 0.00 0.00 5.80
104 105 1.600916 GCTTGAACGAACTGGGCCT 60.601 57.895 4.53 0.00 0.00 5.19
105 106 1.172812 GCTTGAACGAACTGGGCCTT 61.173 55.000 4.53 0.00 0.00 4.35
106 107 0.875059 CTTGAACGAACTGGGCCTTC 59.125 55.000 4.53 0.00 0.00 3.46
107 108 0.181587 TTGAACGAACTGGGCCTTCA 59.818 50.000 4.53 1.81 0.00 3.02
108 109 0.250295 TGAACGAACTGGGCCTTCAG 60.250 55.000 4.53 4.86 40.40 3.02
110 111 0.250338 AACGAACTGGGCCTTCAGTC 60.250 55.000 14.20 7.90 46.17 3.51
111 112 1.738099 CGAACTGGGCCTTCAGTCG 60.738 63.158 14.20 14.35 46.17 4.18
112 113 2.032681 AACTGGGCCTTCAGTCGC 59.967 61.111 14.20 0.00 46.17 5.19
113 114 3.553095 AACTGGGCCTTCAGTCGCC 62.553 63.158 14.20 0.00 46.17 5.54
117 118 4.785453 GGCCTTCAGTCGCCCAGG 62.785 72.222 0.00 0.00 39.39 4.45
119 120 4.785453 CCTTCAGTCGCCCAGGCC 62.785 72.222 2.37 0.00 37.98 5.19
120 121 4.785453 CTTCAGTCGCCCAGGCCC 62.785 72.222 0.00 0.00 37.98 5.80
135 136 2.505982 CCCCAGGCACGATCGATT 59.494 61.111 24.34 0.00 0.00 3.34
136 137 1.745890 CCCCAGGCACGATCGATTA 59.254 57.895 24.34 0.00 0.00 1.75
137 138 0.319900 CCCCAGGCACGATCGATTAG 60.320 60.000 24.34 9.53 0.00 1.73
138 139 0.673985 CCCAGGCACGATCGATTAGA 59.326 55.000 24.34 0.00 0.00 2.10
139 140 1.336332 CCCAGGCACGATCGATTAGAG 60.336 57.143 24.34 6.04 0.00 2.43
140 141 1.413382 CAGGCACGATCGATTAGAGC 58.587 55.000 24.34 14.24 0.00 4.09
150 151 4.849883 GATCGATTAGAGCGAGTTCTTGA 58.150 43.478 0.00 0.00 41.49 3.02
151 152 4.902443 TCGATTAGAGCGAGTTCTTGAT 57.098 40.909 0.00 0.00 33.33 2.57
152 153 5.250235 TCGATTAGAGCGAGTTCTTGATT 57.750 39.130 0.00 0.00 33.33 2.57
153 154 5.274718 TCGATTAGAGCGAGTTCTTGATTC 58.725 41.667 0.00 0.00 33.33 2.52
154 155 4.145585 CGATTAGAGCGAGTTCTTGATTCG 59.854 45.833 0.00 0.00 40.12 3.34
155 156 4.436242 TTAGAGCGAGTTCTTGATTCGT 57.564 40.909 0.00 0.00 39.43 3.85
156 157 2.869897 AGAGCGAGTTCTTGATTCGTC 58.130 47.619 0.00 4.53 39.43 4.20
157 158 1.579808 GAGCGAGTTCTTGATTCGTCG 59.420 52.381 0.00 0.00 39.43 5.12
158 159 1.199327 AGCGAGTTCTTGATTCGTCGA 59.801 47.619 0.00 0.00 39.43 4.20
159 160 1.983605 GCGAGTTCTTGATTCGTCGAA 59.016 47.619 10.61 10.61 39.43 3.71
160 161 2.407361 GCGAGTTCTTGATTCGTCGAAA 59.593 45.455 12.40 0.00 39.43 3.46
161 162 3.480505 GCGAGTTCTTGATTCGTCGAAAG 60.481 47.826 12.40 5.30 39.43 2.62
162 163 3.912563 CGAGTTCTTGATTCGTCGAAAGA 59.087 43.478 12.40 7.73 33.34 2.52
163 164 4.559251 CGAGTTCTTGATTCGTCGAAAGAT 59.441 41.667 12.40 0.00 45.19 2.40
165 166 4.627467 AGTTCTTGATTCGTCGAAAGATGG 59.373 41.667 12.40 2.36 46.99 3.51
166 167 2.930040 TCTTGATTCGTCGAAAGATGGC 59.070 45.455 12.40 0.00 46.99 4.40
167 168 2.672961 TGATTCGTCGAAAGATGGCT 57.327 45.000 12.40 0.00 46.99 4.75
168 169 2.270923 TGATTCGTCGAAAGATGGCTG 58.729 47.619 12.40 0.00 46.99 4.85
169 170 1.594862 GATTCGTCGAAAGATGGCTGG 59.405 52.381 12.40 0.00 46.99 4.85
170 171 0.320374 TTCGTCGAAAGATGGCTGGT 59.680 50.000 4.91 0.00 46.99 4.00
171 172 0.320374 TCGTCGAAAGATGGCTGGTT 59.680 50.000 0.00 0.00 46.99 3.67
172 173 0.721718 CGTCGAAAGATGGCTGGTTC 59.278 55.000 0.00 0.00 45.19 3.62
173 174 0.721718 GTCGAAAGATGGCTGGTTCG 59.278 55.000 0.00 0.00 45.19 3.95
174 175 1.019278 TCGAAAGATGGCTGGTTCGC 61.019 55.000 0.00 0.00 41.92 4.70
193 194 2.202570 CGTTCGCGGACTCGGATT 60.203 61.111 16.95 0.00 36.88 3.01
194 195 2.222217 CGTTCGCGGACTCGGATTC 61.222 63.158 16.95 0.00 36.88 2.52
195 196 1.139095 GTTCGCGGACTCGGATTCT 59.861 57.895 11.18 0.00 36.79 2.40
196 197 0.458025 GTTCGCGGACTCGGATTCTT 60.458 55.000 11.18 0.00 36.79 2.52
197 198 0.457853 TTCGCGGACTCGGATTCTTG 60.458 55.000 6.13 0.00 36.79 3.02
198 199 1.878522 CGCGGACTCGGATTCTTGG 60.879 63.158 0.00 0.00 36.79 3.61
199 200 1.218316 GCGGACTCGGATTCTTGGT 59.782 57.895 0.00 0.00 36.79 3.67
200 201 0.391263 GCGGACTCGGATTCTTGGTT 60.391 55.000 0.00 0.00 36.79 3.67
201 202 1.944430 GCGGACTCGGATTCTTGGTTT 60.944 52.381 0.00 0.00 36.79 3.27
202 203 2.000447 CGGACTCGGATTCTTGGTTTC 59.000 52.381 0.00 0.00 0.00 2.78
203 204 2.353803 CGGACTCGGATTCTTGGTTTCT 60.354 50.000 0.00 0.00 0.00 2.52
204 205 3.676093 GGACTCGGATTCTTGGTTTCTT 58.324 45.455 0.00 0.00 0.00 2.52
205 206 3.437049 GGACTCGGATTCTTGGTTTCTTG 59.563 47.826 0.00 0.00 0.00 3.02
206 207 2.814336 ACTCGGATTCTTGGTTTCTTGC 59.186 45.455 0.00 0.00 0.00 4.01
207 208 2.159382 TCGGATTCTTGGTTTCTTGCC 58.841 47.619 0.00 0.00 0.00 4.52
208 209 1.885887 CGGATTCTTGGTTTCTTGCCA 59.114 47.619 0.00 0.00 0.00 4.92
209 210 2.295909 CGGATTCTTGGTTTCTTGCCAA 59.704 45.455 0.00 0.00 43.04 4.52
210 211 3.653344 GGATTCTTGGTTTCTTGCCAAC 58.347 45.455 0.00 0.00 40.69 3.77
211 212 3.321968 GGATTCTTGGTTTCTTGCCAACT 59.678 43.478 0.00 0.00 40.69 3.16
212 213 4.550422 GATTCTTGGTTTCTTGCCAACTC 58.450 43.478 0.00 0.00 40.69 3.01
213 214 3.297134 TCTTGGTTTCTTGCCAACTCT 57.703 42.857 0.00 0.00 40.69 3.24
214 215 2.951642 TCTTGGTTTCTTGCCAACTCTG 59.048 45.455 0.00 0.00 40.69 3.35
215 216 2.435372 TGGTTTCTTGCCAACTCTGT 57.565 45.000 0.00 0.00 32.29 3.41
216 217 2.733956 TGGTTTCTTGCCAACTCTGTT 58.266 42.857 0.00 0.00 32.29 3.16
217 218 2.687935 TGGTTTCTTGCCAACTCTGTTC 59.312 45.455 0.00 0.00 32.29 3.18
218 219 2.952310 GGTTTCTTGCCAACTCTGTTCT 59.048 45.455 0.00 0.00 0.00 3.01
219 220 3.381590 GGTTTCTTGCCAACTCTGTTCTT 59.618 43.478 0.00 0.00 0.00 2.52
220 221 4.498177 GGTTTCTTGCCAACTCTGTTCTTC 60.498 45.833 0.00 0.00 0.00 2.87
221 222 3.558931 TCTTGCCAACTCTGTTCTTCA 57.441 42.857 0.00 0.00 0.00 3.02
222 223 3.884895 TCTTGCCAACTCTGTTCTTCAA 58.115 40.909 0.00 0.00 0.00 2.69
223 224 4.464008 TCTTGCCAACTCTGTTCTTCAAT 58.536 39.130 0.00 0.00 0.00 2.57
224 225 4.889409 TCTTGCCAACTCTGTTCTTCAATT 59.111 37.500 0.00 0.00 0.00 2.32
225 226 5.360714 TCTTGCCAACTCTGTTCTTCAATTT 59.639 36.000 0.00 0.00 0.00 1.82
226 227 5.186996 TGCCAACTCTGTTCTTCAATTTC 57.813 39.130 0.00 0.00 0.00 2.17
227 228 4.222114 GCCAACTCTGTTCTTCAATTTCG 58.778 43.478 0.00 0.00 0.00 3.46
228 229 4.222114 CCAACTCTGTTCTTCAATTTCGC 58.778 43.478 0.00 0.00 0.00 4.70
229 230 4.222114 CAACTCTGTTCTTCAATTTCGCC 58.778 43.478 0.00 0.00 0.00 5.54
230 231 2.480419 ACTCTGTTCTTCAATTTCGCCG 59.520 45.455 0.00 0.00 0.00 6.46
231 232 2.480419 CTCTGTTCTTCAATTTCGCCGT 59.520 45.455 0.00 0.00 0.00 5.68
232 233 2.223144 TCTGTTCTTCAATTTCGCCGTG 59.777 45.455 0.00 0.00 0.00 4.94
233 234 1.327507 GTTCTTCAATTTCGCCGTGC 58.672 50.000 0.00 0.00 0.00 5.34
255 256 4.546409 GTTTTCGATCACAAATTTCGCC 57.454 40.909 0.00 0.00 33.08 5.54
256 257 2.911819 TTCGATCACAAATTTCGCCC 57.088 45.000 0.00 0.00 33.08 6.13
257 258 2.107950 TCGATCACAAATTTCGCCCT 57.892 45.000 0.00 0.00 33.08 5.19
258 259 1.737236 TCGATCACAAATTTCGCCCTG 59.263 47.619 0.00 0.00 33.08 4.45
259 260 1.795162 CGATCACAAATTTCGCCCTGC 60.795 52.381 0.00 0.00 0.00 4.85
270 271 2.180017 GCCCTGCGCAATTCTGTG 59.820 61.111 13.05 0.00 37.47 3.66
271 272 2.334946 GCCCTGCGCAATTCTGTGA 61.335 57.895 13.05 0.00 37.47 3.58
272 273 1.660560 GCCCTGCGCAATTCTGTGAT 61.661 55.000 13.05 0.00 37.47 3.06
273 274 0.379669 CCCTGCGCAATTCTGTGATC 59.620 55.000 13.05 0.00 34.83 2.92
274 275 0.027194 CCTGCGCAATTCTGTGATCG 59.973 55.000 13.05 0.00 34.83 3.69
275 276 0.588233 CTGCGCAATTCTGTGATCGC 60.588 55.000 13.05 0.00 42.47 4.58
276 277 1.649348 GCGCAATTCTGTGATCGCG 60.649 57.895 0.30 0.00 45.13 5.87
277 278 1.998285 CGCAATTCTGTGATCGCGA 59.002 52.632 13.09 13.09 45.17 5.87
278 279 0.578683 CGCAATTCTGTGATCGCGAT 59.421 50.000 23.97 23.97 45.17 4.58
279 280 1.655600 CGCAATTCTGTGATCGCGATG 60.656 52.381 29.09 12.38 45.17 3.84
280 281 1.333524 GCAATTCTGTGATCGCGATGG 60.334 52.381 29.09 13.36 0.00 3.51
281 282 0.940126 AATTCTGTGATCGCGATGGC 59.060 50.000 29.09 18.55 0.00 4.40
282 283 0.105593 ATTCTGTGATCGCGATGGCT 59.894 50.000 29.09 1.86 36.88 4.75
283 284 0.108186 TTCTGTGATCGCGATGGCTT 60.108 50.000 29.09 1.35 36.88 4.35
284 285 0.108186 TCTGTGATCGCGATGGCTTT 60.108 50.000 29.09 0.38 36.88 3.51
285 286 0.027194 CTGTGATCGCGATGGCTTTG 59.973 55.000 29.09 7.63 36.88 2.77
286 287 1.353103 GTGATCGCGATGGCTTTGG 59.647 57.895 29.09 0.00 36.88 3.28
287 288 1.819208 TGATCGCGATGGCTTTGGG 60.819 57.895 29.09 0.00 36.88 4.12
288 289 1.819632 GATCGCGATGGCTTTGGGT 60.820 57.895 29.09 0.00 36.88 4.51
289 290 1.376609 GATCGCGATGGCTTTGGGTT 61.377 55.000 29.09 0.00 36.88 4.11
290 291 1.376609 ATCGCGATGGCTTTGGGTTC 61.377 55.000 23.04 0.00 36.88 3.62
291 292 2.040544 CGCGATGGCTTTGGGTTCT 61.041 57.895 0.00 0.00 36.88 3.01
292 293 1.586154 CGCGATGGCTTTGGGTTCTT 61.586 55.000 0.00 0.00 36.88 2.52
293 294 0.109132 GCGATGGCTTTGGGTTCTTG 60.109 55.000 0.00 0.00 35.83 3.02
294 295 1.533625 CGATGGCTTTGGGTTCTTGA 58.466 50.000 0.00 0.00 0.00 3.02
295 296 1.470098 CGATGGCTTTGGGTTCTTGAG 59.530 52.381 0.00 0.00 0.00 3.02
296 297 1.203287 GATGGCTTTGGGTTCTTGAGC 59.797 52.381 0.00 0.00 0.00 4.26
297 298 1.172180 TGGCTTTGGGTTCTTGAGCG 61.172 55.000 0.00 0.00 34.27 5.03
298 299 1.581447 GCTTTGGGTTCTTGAGCGG 59.419 57.895 0.00 0.00 0.00 5.52
299 300 1.866853 GCTTTGGGTTCTTGAGCGGG 61.867 60.000 0.00 0.00 0.00 6.13
300 301 1.866853 CTTTGGGTTCTTGAGCGGGC 61.867 60.000 0.00 0.00 0.00 6.13
301 302 4.697756 TGGGTTCTTGAGCGGGCG 62.698 66.667 0.00 0.00 0.00 6.13
302 303 4.699522 GGGTTCTTGAGCGGGCGT 62.700 66.667 0.00 0.00 0.00 5.68
303 304 2.668550 GGTTCTTGAGCGGGCGTT 60.669 61.111 0.00 0.00 0.00 4.84
304 305 2.677979 GGTTCTTGAGCGGGCGTTC 61.678 63.158 0.00 0.00 0.00 3.95
305 306 2.358247 TTCTTGAGCGGGCGTTCC 60.358 61.111 0.00 0.00 0.00 3.62
306 307 2.879233 TTCTTGAGCGGGCGTTCCT 61.879 57.895 0.00 0.00 0.00 3.36
307 308 2.358737 CTTGAGCGGGCGTTCCTT 60.359 61.111 0.00 0.00 0.00 3.36
308 309 1.079405 CTTGAGCGGGCGTTCCTTA 60.079 57.895 0.00 0.00 0.00 2.69
309 310 0.672401 CTTGAGCGGGCGTTCCTTAA 60.672 55.000 0.00 0.00 0.00 1.85
310 311 0.035820 TTGAGCGGGCGTTCCTTAAT 60.036 50.000 0.00 0.00 0.00 1.40
311 312 0.035820 TGAGCGGGCGTTCCTTAATT 60.036 50.000 0.00 0.00 0.00 1.40
312 313 1.092348 GAGCGGGCGTTCCTTAATTT 58.908 50.000 0.00 0.00 0.00 1.82
313 314 0.808755 AGCGGGCGTTCCTTAATTTG 59.191 50.000 0.00 0.00 0.00 2.32
314 315 0.800683 GCGGGCGTTCCTTAATTTGC 60.801 55.000 0.00 0.00 0.00 3.68
315 316 0.523966 CGGGCGTTCCTTAATTTGCA 59.476 50.000 0.00 0.00 0.00 4.08
316 317 1.134175 CGGGCGTTCCTTAATTTGCAT 59.866 47.619 0.00 0.00 0.00 3.96
317 318 2.794631 CGGGCGTTCCTTAATTTGCATC 60.795 50.000 0.00 0.00 0.00 3.91
318 319 2.481276 GGGCGTTCCTTAATTTGCATCC 60.481 50.000 0.00 0.00 0.00 3.51
319 320 2.481276 GGCGTTCCTTAATTTGCATCCC 60.481 50.000 0.00 0.00 0.00 3.85
320 321 2.481276 GCGTTCCTTAATTTGCATCCCC 60.481 50.000 0.00 0.00 0.00 4.81
321 322 2.757868 CGTTCCTTAATTTGCATCCCCA 59.242 45.455 0.00 0.00 0.00 4.96
322 323 3.384467 CGTTCCTTAATTTGCATCCCCAT 59.616 43.478 0.00 0.00 0.00 4.00
323 324 4.582656 CGTTCCTTAATTTGCATCCCCATA 59.417 41.667 0.00 0.00 0.00 2.74
324 325 5.243730 CGTTCCTTAATTTGCATCCCCATAT 59.756 40.000 0.00 0.00 0.00 1.78
325 326 6.570378 CGTTCCTTAATTTGCATCCCCATATC 60.570 42.308 0.00 0.00 0.00 1.63
326 327 5.963092 TCCTTAATTTGCATCCCCATATCA 58.037 37.500 0.00 0.00 0.00 2.15
327 328 6.012113 TCCTTAATTTGCATCCCCATATCAG 58.988 40.000 0.00 0.00 0.00 2.90
328 329 6.012113 CCTTAATTTGCATCCCCATATCAGA 58.988 40.000 0.00 0.00 0.00 3.27
329 330 6.666546 CCTTAATTTGCATCCCCATATCAGAT 59.333 38.462 0.00 0.00 0.00 2.90
330 331 7.147949 CCTTAATTTGCATCCCCATATCAGATC 60.148 40.741 0.00 0.00 0.00 2.75
331 332 4.727792 TTTGCATCCCCATATCAGATCA 57.272 40.909 0.00 0.00 0.00 2.92
332 333 4.940468 TTGCATCCCCATATCAGATCAT 57.060 40.909 0.00 0.00 0.00 2.45
333 334 4.940468 TGCATCCCCATATCAGATCATT 57.060 40.909 0.00 0.00 0.00 2.57
334 335 4.851843 TGCATCCCCATATCAGATCATTC 58.148 43.478 0.00 0.00 0.00 2.67
335 336 3.875727 GCATCCCCATATCAGATCATTCG 59.124 47.826 0.00 0.00 0.00 3.34
336 337 4.624843 GCATCCCCATATCAGATCATTCGT 60.625 45.833 0.00 0.00 0.00 3.85
337 338 4.541973 TCCCCATATCAGATCATTCGTG 57.458 45.455 0.00 0.00 0.00 4.35
338 339 3.005554 CCCCATATCAGATCATTCGTGC 58.994 50.000 0.00 0.00 0.00 5.34
339 340 3.307269 CCCCATATCAGATCATTCGTGCT 60.307 47.826 0.00 0.00 0.00 4.40
340 341 3.931468 CCCATATCAGATCATTCGTGCTC 59.069 47.826 0.00 0.00 0.00 4.26
341 342 4.562143 CCCATATCAGATCATTCGTGCTCA 60.562 45.833 0.00 0.00 0.00 4.26
342 343 5.176592 CCATATCAGATCATTCGTGCTCAT 58.823 41.667 0.00 0.00 0.00 2.90
343 344 5.063564 CCATATCAGATCATTCGTGCTCATG 59.936 44.000 0.00 0.00 0.00 3.07
344 345 3.531934 TCAGATCATTCGTGCTCATGT 57.468 42.857 0.00 0.00 0.00 3.21
345 346 3.865446 TCAGATCATTCGTGCTCATGTT 58.135 40.909 0.00 0.00 0.00 2.71
346 347 4.256110 TCAGATCATTCGTGCTCATGTTT 58.744 39.130 0.00 0.00 0.00 2.83
347 348 4.330894 TCAGATCATTCGTGCTCATGTTTC 59.669 41.667 0.00 0.00 0.00 2.78
348 349 4.331992 CAGATCATTCGTGCTCATGTTTCT 59.668 41.667 0.00 0.00 0.00 2.52
349 350 5.521372 CAGATCATTCGTGCTCATGTTTCTA 59.479 40.000 0.00 0.00 0.00 2.10
350 351 6.202379 CAGATCATTCGTGCTCATGTTTCTAT 59.798 38.462 0.00 0.00 0.00 1.98
351 352 5.973651 TCATTCGTGCTCATGTTTCTATC 57.026 39.130 0.00 0.00 0.00 2.08
352 353 5.418676 TCATTCGTGCTCATGTTTCTATCA 58.581 37.500 0.00 0.00 0.00 2.15
353 354 5.291858 TCATTCGTGCTCATGTTTCTATCAC 59.708 40.000 0.00 0.00 0.00 3.06
354 355 4.456280 TCGTGCTCATGTTTCTATCACT 57.544 40.909 0.00 0.00 0.00 3.41
355 356 4.820897 TCGTGCTCATGTTTCTATCACTT 58.179 39.130 0.00 0.00 0.00 3.16
356 357 5.237815 TCGTGCTCATGTTTCTATCACTTT 58.762 37.500 0.00 0.00 0.00 2.66
357 358 5.120674 TCGTGCTCATGTTTCTATCACTTTG 59.879 40.000 0.00 0.00 0.00 2.77
358 359 5.106948 CGTGCTCATGTTTCTATCACTTTGT 60.107 40.000 0.00 0.00 0.00 2.83
359 360 6.566564 CGTGCTCATGTTTCTATCACTTTGTT 60.567 38.462 0.00 0.00 0.00 2.83
360 361 7.141363 GTGCTCATGTTTCTATCACTTTGTTT 58.859 34.615 0.00 0.00 0.00 2.83
361 362 7.324616 GTGCTCATGTTTCTATCACTTTGTTTC 59.675 37.037 0.00 0.00 0.00 2.78
362 363 6.521133 GCTCATGTTTCTATCACTTTGTTTCG 59.479 38.462 0.00 0.00 0.00 3.46
363 364 6.370593 TCATGTTTCTATCACTTTGTTTCGC 58.629 36.000 0.00 0.00 0.00 4.70
364 365 5.743026 TGTTTCTATCACTTTGTTTCGCA 57.257 34.783 0.00 0.00 0.00 5.10
365 366 5.747565 TGTTTCTATCACTTTGTTTCGCAG 58.252 37.500 0.00 0.00 0.00 5.18
366 367 4.404507 TTCTATCACTTTGTTTCGCAGC 57.595 40.909 0.00 0.00 0.00 5.25
367 368 3.664107 TCTATCACTTTGTTTCGCAGCT 58.336 40.909 0.00 0.00 0.00 4.24
368 369 2.977405 ATCACTTTGTTTCGCAGCTC 57.023 45.000 0.00 0.00 0.00 4.09
369 370 0.944386 TCACTTTGTTTCGCAGCTCC 59.056 50.000 0.00 0.00 0.00 4.70
370 371 0.040067 CACTTTGTTTCGCAGCTCCC 60.040 55.000 0.00 0.00 0.00 4.30
371 372 0.465460 ACTTTGTTTCGCAGCTCCCA 60.465 50.000 0.00 0.00 0.00 4.37
372 373 0.883833 CTTTGTTTCGCAGCTCCCAT 59.116 50.000 0.00 0.00 0.00 4.00
373 374 0.881118 TTTGTTTCGCAGCTCCCATC 59.119 50.000 0.00 0.00 0.00 3.51
374 375 0.960364 TTGTTTCGCAGCTCCCATCC 60.960 55.000 0.00 0.00 0.00 3.51
375 376 2.115291 GTTTCGCAGCTCCCATCCC 61.115 63.158 0.00 0.00 0.00 3.85
376 377 2.601702 TTTCGCAGCTCCCATCCCA 61.602 57.895 0.00 0.00 0.00 4.37
377 378 2.541547 TTTCGCAGCTCCCATCCCAG 62.542 60.000 0.00 0.00 0.00 4.45
378 379 4.559063 CGCAGCTCCCATCCCAGG 62.559 72.222 0.00 0.00 0.00 4.45
379 380 3.092511 GCAGCTCCCATCCCAGGA 61.093 66.667 0.00 0.00 0.00 3.86
384 385 2.431023 CTCCCATCCCAGGAGTACG 58.569 63.158 0.00 0.00 45.05 3.67
385 386 1.075525 TCCCATCCCAGGAGTACGG 60.076 63.158 0.00 0.00 0.00 4.02
386 387 2.808206 CCCATCCCAGGAGTACGGC 61.808 68.421 0.00 0.00 0.00 5.68
387 388 1.762460 CCATCCCAGGAGTACGGCT 60.762 63.158 0.00 0.00 0.00 5.52
388 389 1.338136 CCATCCCAGGAGTACGGCTT 61.338 60.000 0.00 0.00 0.00 4.35
389 390 0.179073 CATCCCAGGAGTACGGCTTG 60.179 60.000 0.00 0.00 0.00 4.01
390 391 1.972660 ATCCCAGGAGTACGGCTTGC 61.973 60.000 0.00 0.00 0.00 4.01
391 392 2.509336 CCAGGAGTACGGCTTGCG 60.509 66.667 0.00 0.00 0.00 4.85
392 393 2.509336 CAGGAGTACGGCTTGCGG 60.509 66.667 0.00 0.00 0.00 5.69
393 394 4.452733 AGGAGTACGGCTTGCGGC 62.453 66.667 0.00 0.00 40.90 6.53
432 433 4.729918 CCAAGGCTGGCTTCCGCT 62.730 66.667 14.12 0.00 35.39 5.52
433 434 3.437795 CAAGGCTGGCTTCCGCTG 61.438 66.667 14.12 0.00 36.09 5.18
446 447 4.914420 CGCTGCGGAGGCTACGAG 62.914 72.222 26.08 17.82 39.47 4.18
447 448 3.827898 GCTGCGGAGGCTACGAGT 61.828 66.667 26.08 0.00 40.82 4.18
448 449 2.103143 CTGCGGAGGCTACGAGTG 59.897 66.667 26.08 7.73 40.82 3.51
449 450 3.417275 CTGCGGAGGCTACGAGTGG 62.417 68.421 26.08 4.96 40.82 4.00
450 451 4.208686 GCGGAGGCTACGAGTGGG 62.209 72.222 26.08 0.00 35.83 4.61
451 452 2.754658 CGGAGGCTACGAGTGGGT 60.755 66.667 15.64 0.00 0.00 4.51
452 453 2.893398 GGAGGCTACGAGTGGGTG 59.107 66.667 0.00 0.00 0.00 4.61
453 454 2.184579 GAGGCTACGAGTGGGTGC 59.815 66.667 0.00 0.00 0.00 5.01
454 455 2.283966 AGGCTACGAGTGGGTGCT 60.284 61.111 0.00 0.00 0.00 4.40
455 456 2.184579 GGCTACGAGTGGGTGCTC 59.815 66.667 0.00 0.00 0.00 4.26
461 462 2.574399 GAGTGGGTGCTCGACTCC 59.426 66.667 10.11 0.00 42.91 3.85
465 466 4.131088 GGGTGCTCGACTCCCGAC 62.131 72.222 8.66 0.00 42.12 4.79
466 467 3.371063 GGTGCTCGACTCCCGACA 61.371 66.667 0.00 0.00 43.23 4.35
467 468 2.126424 GTGCTCGACTCCCGACAC 60.126 66.667 0.00 0.00 43.23 3.67
468 469 3.733960 TGCTCGACTCCCGACACG 61.734 66.667 0.00 0.00 43.23 4.49
470 471 4.477975 CTCGACTCCCGACACGCC 62.478 72.222 0.00 0.00 43.23 5.68
473 474 3.998672 GACTCCCGACACGCCCAA 61.999 66.667 0.00 0.00 0.00 4.12
474 475 3.934391 GACTCCCGACACGCCCAAG 62.934 68.421 0.00 0.00 0.00 3.61
501 502 4.821589 CTGCCGGCGAAGTCCCTC 62.822 72.222 23.90 0.00 0.00 4.30
504 505 4.452733 CCGGCGAAGTCCCTCCAC 62.453 72.222 9.30 0.00 0.00 4.02
505 506 3.691342 CGGCGAAGTCCCTCCACA 61.691 66.667 0.00 0.00 0.00 4.17
506 507 2.047179 GGCGAAGTCCCTCCACAC 60.047 66.667 0.00 0.00 0.00 3.82
507 508 2.047179 GCGAAGTCCCTCCACACC 60.047 66.667 0.00 0.00 0.00 4.16
508 509 2.879233 GCGAAGTCCCTCCACACCA 61.879 63.158 0.00 0.00 0.00 4.17
509 510 1.004918 CGAAGTCCCTCCACACCAC 60.005 63.158 0.00 0.00 0.00 4.16
510 511 1.754380 CGAAGTCCCTCCACACCACA 61.754 60.000 0.00 0.00 0.00 4.17
511 512 0.250338 GAAGTCCCTCCACACCACAC 60.250 60.000 0.00 0.00 0.00 3.82
512 513 0.694444 AAGTCCCTCCACACCACACT 60.694 55.000 0.00 0.00 0.00 3.55
513 514 1.071471 GTCCCTCCACACCACACTG 59.929 63.158 0.00 0.00 0.00 3.66
514 515 1.074850 TCCCTCCACACCACACTGA 60.075 57.895 0.00 0.00 0.00 3.41
515 516 0.692756 TCCCTCCACACCACACTGAA 60.693 55.000 0.00 0.00 0.00 3.02
516 517 0.535102 CCCTCCACACCACACTGAAC 60.535 60.000 0.00 0.00 0.00 3.18
517 518 0.469917 CCTCCACACCACACTGAACT 59.530 55.000 0.00 0.00 0.00 3.01
518 519 1.134098 CCTCCACACCACACTGAACTT 60.134 52.381 0.00 0.00 0.00 2.66
519 520 2.643551 CTCCACACCACACTGAACTTT 58.356 47.619 0.00 0.00 0.00 2.66
520 521 2.614057 CTCCACACCACACTGAACTTTC 59.386 50.000 0.00 0.00 0.00 2.62
521 522 2.238646 TCCACACCACACTGAACTTTCT 59.761 45.455 0.00 0.00 0.00 2.52
522 523 2.355756 CCACACCACACTGAACTTTCTG 59.644 50.000 0.00 0.00 0.00 3.02
523 524 2.355756 CACACCACACTGAACTTTCTGG 59.644 50.000 1.54 0.00 0.00 3.86
524 525 2.026262 ACACCACACTGAACTTTCTGGT 60.026 45.455 1.54 0.00 33.75 4.00
525 526 2.355756 CACCACACTGAACTTTCTGGTG 59.644 50.000 11.58 11.58 40.81 4.17
526 527 2.238646 ACCACACTGAACTTTCTGGTGA 59.761 45.455 16.61 0.00 32.69 4.02
527 528 2.874701 CCACACTGAACTTTCTGGTGAG 59.125 50.000 16.61 11.37 36.38 3.51
528 529 3.432186 CCACACTGAACTTTCTGGTGAGA 60.432 47.826 16.61 0.00 36.38 3.27
529 530 4.191544 CACACTGAACTTTCTGGTGAGAA 58.808 43.478 16.61 0.00 36.36 2.87
530 531 4.818546 CACACTGAACTTTCTGGTGAGAAT 59.181 41.667 16.61 0.00 38.05 2.40
531 532 4.818546 ACACTGAACTTTCTGGTGAGAATG 59.181 41.667 16.61 0.00 38.05 2.67
532 533 5.059161 CACTGAACTTTCTGGTGAGAATGA 58.941 41.667 0.00 0.00 38.05 2.57
533 534 5.178996 CACTGAACTTTCTGGTGAGAATGAG 59.821 44.000 0.00 0.00 38.05 2.90
534 535 4.645535 TGAACTTTCTGGTGAGAATGAGG 58.354 43.478 0.00 0.00 38.05 3.86
535 536 4.347876 TGAACTTTCTGGTGAGAATGAGGA 59.652 41.667 0.00 0.00 38.05 3.71
536 537 5.013495 TGAACTTTCTGGTGAGAATGAGGAT 59.987 40.000 0.00 0.00 38.05 3.24
537 538 5.096443 ACTTTCTGGTGAGAATGAGGATC 57.904 43.478 0.00 0.00 38.05 3.36
538 539 4.080638 ACTTTCTGGTGAGAATGAGGATCC 60.081 45.833 2.48 2.48 38.05 3.36
539 540 3.411454 TCTGGTGAGAATGAGGATCCT 57.589 47.619 16.13 16.13 0.00 3.24
540 541 3.303938 TCTGGTGAGAATGAGGATCCTC 58.696 50.000 31.59 31.59 43.01 3.71
541 542 3.052262 TCTGGTGAGAATGAGGATCCTCT 60.052 47.826 35.84 21.42 43.12 3.69
542 543 3.303938 TGGTGAGAATGAGGATCCTCTC 58.696 50.000 35.84 27.21 43.12 3.20
543 544 2.632512 GGTGAGAATGAGGATCCTCTCC 59.367 54.545 35.84 25.11 40.47 3.71
550 551 4.637663 GGATCCTCTCCTCCCCTG 57.362 66.667 3.84 0.00 41.29 4.45
551 552 1.841103 GGATCCTCTCCTCCCCTGC 60.841 68.421 3.84 0.00 41.29 4.85
552 553 1.841103 GATCCTCTCCTCCCCTGCC 60.841 68.421 0.00 0.00 0.00 4.85
553 554 2.325101 GATCCTCTCCTCCCCTGCCT 62.325 65.000 0.00 0.00 0.00 4.75
554 555 1.907470 ATCCTCTCCTCCCCTGCCTT 61.907 60.000 0.00 0.00 0.00 4.35
555 556 1.228920 TCCTCTCCTCCCCTGCCTTA 61.229 60.000 0.00 0.00 0.00 2.69
556 557 0.762461 CCTCTCCTCCCCTGCCTTAG 60.762 65.000 0.00 0.00 0.00 2.18
557 558 0.263172 CTCTCCTCCCCTGCCTTAGA 59.737 60.000 0.00 0.00 0.00 2.10
558 559 0.032017 TCTCCTCCCCTGCCTTAGAC 60.032 60.000 0.00 0.00 0.00 2.59
559 560 0.325671 CTCCTCCCCTGCCTTAGACA 60.326 60.000 0.00 0.00 0.00 3.41
560 561 0.617820 TCCTCCCCTGCCTTAGACAC 60.618 60.000 0.00 0.00 0.00 3.67
561 562 1.517832 CTCCCCTGCCTTAGACACG 59.482 63.158 0.00 0.00 0.00 4.49
562 563 2.125106 CCCCTGCCTTAGACACGC 60.125 66.667 0.00 0.00 0.00 5.34
563 564 2.125106 CCCTGCCTTAGACACGCC 60.125 66.667 0.00 0.00 0.00 5.68
564 565 2.662596 CCTGCCTTAGACACGCCA 59.337 61.111 0.00 0.00 0.00 5.69
565 566 1.221840 CCTGCCTTAGACACGCCAT 59.778 57.895 0.00 0.00 0.00 4.40
566 567 0.392998 CCTGCCTTAGACACGCCATT 60.393 55.000 0.00 0.00 0.00 3.16
567 568 1.453155 CTGCCTTAGACACGCCATTT 58.547 50.000 0.00 0.00 0.00 2.32
568 569 1.131126 CTGCCTTAGACACGCCATTTG 59.869 52.381 0.00 0.00 0.00 2.32
569 570 1.165270 GCCTTAGACACGCCATTTGT 58.835 50.000 0.00 0.00 0.00 2.83
570 571 1.539827 GCCTTAGACACGCCATTTGTT 59.460 47.619 0.00 0.00 0.00 2.83
571 572 2.030274 GCCTTAGACACGCCATTTGTTT 60.030 45.455 0.00 0.00 0.00 2.83
572 573 3.552068 GCCTTAGACACGCCATTTGTTTT 60.552 43.478 0.00 0.00 0.00 2.43
573 574 4.320641 GCCTTAGACACGCCATTTGTTTTA 60.321 41.667 0.00 0.00 0.00 1.52
574 575 5.621329 GCCTTAGACACGCCATTTGTTTTAT 60.621 40.000 0.00 0.00 0.00 1.40
575 576 6.386654 CCTTAGACACGCCATTTGTTTTATT 58.613 36.000 0.00 0.00 0.00 1.40
576 577 6.307800 CCTTAGACACGCCATTTGTTTTATTG 59.692 38.462 0.00 0.00 0.00 1.90
577 578 5.195001 AGACACGCCATTTGTTTTATTGT 57.805 34.783 0.00 0.00 0.00 2.71
578 579 5.219633 AGACACGCCATTTGTTTTATTGTC 58.780 37.500 0.00 0.00 0.00 3.18
579 580 4.303282 ACACGCCATTTGTTTTATTGTCC 58.697 39.130 0.00 0.00 0.00 4.02
580 581 4.202161 ACACGCCATTTGTTTTATTGTCCA 60.202 37.500 0.00 0.00 0.00 4.02
581 582 4.385447 CACGCCATTTGTTTTATTGTCCAG 59.615 41.667 0.00 0.00 0.00 3.86
582 583 3.367630 CGCCATTTGTTTTATTGTCCAGC 59.632 43.478 0.00 0.00 0.00 4.85
583 584 4.568956 GCCATTTGTTTTATTGTCCAGCT 58.431 39.130 0.00 0.00 0.00 4.24
584 585 4.996758 GCCATTTGTTTTATTGTCCAGCTT 59.003 37.500 0.00 0.00 0.00 3.74
585 586 5.469760 GCCATTTGTTTTATTGTCCAGCTTT 59.530 36.000 0.00 0.00 0.00 3.51
586 587 6.566376 GCCATTTGTTTTATTGTCCAGCTTTG 60.566 38.462 0.00 0.00 0.00 2.77
587 588 6.482973 CCATTTGTTTTATTGTCCAGCTTTGT 59.517 34.615 0.00 0.00 0.00 2.83
588 589 7.307337 CCATTTGTTTTATTGTCCAGCTTTGTC 60.307 37.037 0.00 0.00 0.00 3.18
589 590 6.463995 TTGTTTTATTGTCCAGCTTTGTCT 57.536 33.333 0.00 0.00 0.00 3.41
590 591 5.830912 TGTTTTATTGTCCAGCTTTGTCTG 58.169 37.500 0.00 0.00 0.00 3.51
591 592 5.359576 TGTTTTATTGTCCAGCTTTGTCTGT 59.640 36.000 0.00 0.00 32.32 3.41
592 593 6.127479 TGTTTTATTGTCCAGCTTTGTCTGTT 60.127 34.615 0.00 0.00 32.32 3.16
593 594 3.996150 ATTGTCCAGCTTTGTCTGTTG 57.004 42.857 0.00 0.00 32.32 3.33
594 595 2.708216 TGTCCAGCTTTGTCTGTTGA 57.292 45.000 0.00 0.00 32.32 3.18
595 596 3.213206 TGTCCAGCTTTGTCTGTTGAT 57.787 42.857 0.00 0.00 32.32 2.57
596 597 2.880268 TGTCCAGCTTTGTCTGTTGATG 59.120 45.455 0.00 0.00 32.32 3.07
597 598 2.880890 GTCCAGCTTTGTCTGTTGATGT 59.119 45.455 0.00 0.00 32.32 3.06
598 599 3.316308 GTCCAGCTTTGTCTGTTGATGTT 59.684 43.478 0.00 0.00 32.32 2.71
599 600 4.515191 GTCCAGCTTTGTCTGTTGATGTTA 59.485 41.667 0.00 0.00 32.32 2.41
600 601 5.008613 GTCCAGCTTTGTCTGTTGATGTTAA 59.991 40.000 0.00 0.00 32.32 2.01
601 602 5.008613 TCCAGCTTTGTCTGTTGATGTTAAC 59.991 40.000 0.00 0.00 32.32 2.01
602 603 5.009010 CCAGCTTTGTCTGTTGATGTTAACT 59.991 40.000 7.22 0.00 32.32 2.24
603 604 5.911280 CAGCTTTGTCTGTTGATGTTAACTG 59.089 40.000 7.22 0.00 0.00 3.16
1222 1226 2.046285 CCCCTCGCCGATTTGCTTT 61.046 57.895 0.00 0.00 0.00 3.51
1424 1585 1.606480 CCTGCGAGAAGAGTTTGCTCA 60.606 52.381 0.00 0.00 44.00 4.26
1724 1963 3.872459 AATTATGAGGCTGAGGGAAGG 57.128 47.619 0.00 0.00 0.00 3.46
2156 2468 8.427774 GCTTGTTTACTTAACTGAAATCAATGC 58.572 33.333 0.00 0.00 37.64 3.56
2176 2488 8.456471 TCAATGCTTCTCTTATTTGACATGAAG 58.544 33.333 0.00 0.00 34.39 3.02
2779 3161 0.320683 CACAACCTCGTCTGCATCCA 60.321 55.000 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.090066 CACGACGAAATTCGAGAACAGAAT 59.910 41.667 22.92 0.00 43.74 2.40
38 39 1.698165 TCAGATCAAGAACGCACGAC 58.302 50.000 0.00 0.00 0.00 4.34
39 40 2.432206 TTCAGATCAAGAACGCACGA 57.568 45.000 0.00 0.00 0.00 4.35
40 41 3.729526 ATTTCAGATCAAGAACGCACG 57.270 42.857 0.00 0.00 0.00 5.34
41 42 5.340667 GTGAAATTTCAGATCAAGAACGCAC 59.659 40.000 21.05 1.45 37.98 5.34
42 43 5.451908 GTGAAATTTCAGATCAAGAACGCA 58.548 37.500 21.05 0.00 37.98 5.24
43 44 4.853743 GGTGAAATTTCAGATCAAGAACGC 59.146 41.667 21.05 4.97 37.98 4.84
44 45 5.082059 CGGTGAAATTTCAGATCAAGAACG 58.918 41.667 21.05 7.47 37.98 3.95
45 46 5.853282 CACGGTGAAATTTCAGATCAAGAAC 59.147 40.000 21.05 6.16 37.98 3.01
46 47 5.762711 TCACGGTGAAATTTCAGATCAAGAA 59.237 36.000 21.05 0.00 37.98 2.52
47 48 5.304778 TCACGGTGAAATTTCAGATCAAGA 58.695 37.500 21.05 11.42 37.98 3.02
48 49 5.611796 TCACGGTGAAATTTCAGATCAAG 57.388 39.130 21.05 10.92 37.98 3.02
49 50 6.380995 CAATCACGGTGAAATTTCAGATCAA 58.619 36.000 21.05 7.87 37.98 2.57
50 51 5.619757 GCAATCACGGTGAAATTTCAGATCA 60.620 40.000 21.05 5.33 37.98 2.92
51 52 4.795278 GCAATCACGGTGAAATTTCAGATC 59.205 41.667 21.05 9.66 37.98 2.75
52 53 4.672542 CGCAATCACGGTGAAATTTCAGAT 60.673 41.667 21.05 16.09 37.98 2.90
53 54 3.364864 CGCAATCACGGTGAAATTTCAGA 60.365 43.478 21.05 14.58 37.98 3.27
54 55 2.910482 CGCAATCACGGTGAAATTTCAG 59.090 45.455 21.05 12.82 37.98 3.02
55 56 2.550180 TCGCAATCACGGTGAAATTTCA 59.450 40.909 16.91 16.91 34.20 2.69
56 57 3.196007 TCGCAATCACGGTGAAATTTC 57.804 42.857 15.72 11.41 0.00 2.17
57 58 3.727673 CGATCGCAATCACGGTGAAATTT 60.728 43.478 15.72 2.10 31.76 1.82
58 59 2.223021 CGATCGCAATCACGGTGAAATT 60.223 45.455 15.72 2.88 31.76 1.82
59 60 1.327460 CGATCGCAATCACGGTGAAAT 59.673 47.619 15.72 4.43 31.76 2.17
60 61 0.718904 CGATCGCAATCACGGTGAAA 59.281 50.000 15.72 0.00 31.76 2.69
61 62 0.389296 ACGATCGCAATCACGGTGAA 60.389 50.000 16.60 0.00 31.76 3.18
62 63 0.389296 AACGATCGCAATCACGGTGA 60.389 50.000 16.60 14.01 31.76 4.02
63 64 0.442310 AAACGATCGCAATCACGGTG 59.558 50.000 16.60 0.56 31.76 4.94
64 65 0.442310 CAAACGATCGCAATCACGGT 59.558 50.000 16.60 0.00 31.76 4.83
65 66 0.718904 TCAAACGATCGCAATCACGG 59.281 50.000 16.60 0.00 31.76 4.94
66 67 2.421523 CTTCAAACGATCGCAATCACG 58.578 47.619 16.60 0.00 31.76 4.35
67 68 2.159653 AGCTTCAAACGATCGCAATCAC 60.160 45.455 16.60 0.00 31.76 3.06
68 69 2.076100 AGCTTCAAACGATCGCAATCA 58.924 42.857 16.60 0.00 31.76 2.57
69 70 2.813779 AGCTTCAAACGATCGCAATC 57.186 45.000 16.60 0.00 0.00 2.67
70 71 2.483877 TCAAGCTTCAAACGATCGCAAT 59.516 40.909 16.60 0.00 0.00 3.56
71 72 1.870402 TCAAGCTTCAAACGATCGCAA 59.130 42.857 16.60 2.11 0.00 4.85
72 73 1.507562 TCAAGCTTCAAACGATCGCA 58.492 45.000 16.60 0.00 0.00 5.10
73 74 2.234187 GTTCAAGCTTCAAACGATCGC 58.766 47.619 16.60 0.00 0.00 4.58
74 75 2.154963 TCGTTCAAGCTTCAAACGATCG 59.845 45.455 28.98 14.88 46.81 3.69
75 76 3.788434 TCGTTCAAGCTTCAAACGATC 57.212 42.857 28.98 10.51 46.81 3.69
78 79 3.029074 CAGTTCGTTCAAGCTTCAAACG 58.971 45.455 26.41 26.41 45.24 3.60
79 80 3.363178 CCAGTTCGTTCAAGCTTCAAAC 58.637 45.455 0.00 3.48 0.00 2.93
80 81 2.357637 CCCAGTTCGTTCAAGCTTCAAA 59.642 45.455 0.00 0.00 0.00 2.69
81 82 1.946768 CCCAGTTCGTTCAAGCTTCAA 59.053 47.619 0.00 0.00 0.00 2.69
82 83 1.593196 CCCAGTTCGTTCAAGCTTCA 58.407 50.000 0.00 0.00 0.00 3.02
83 84 0.238553 GCCCAGTTCGTTCAAGCTTC 59.761 55.000 0.00 0.00 0.00 3.86
84 85 1.172812 GGCCCAGTTCGTTCAAGCTT 61.173 55.000 0.00 0.00 0.00 3.74
85 86 1.600916 GGCCCAGTTCGTTCAAGCT 60.601 57.895 0.00 0.00 0.00 3.74
86 87 1.172812 AAGGCCCAGTTCGTTCAAGC 61.173 55.000 0.00 0.00 0.00 4.01
87 88 0.875059 GAAGGCCCAGTTCGTTCAAG 59.125 55.000 0.00 0.00 0.00 3.02
88 89 0.181587 TGAAGGCCCAGTTCGTTCAA 59.818 50.000 0.00 0.00 36.00 2.69
89 90 0.250295 CTGAAGGCCCAGTTCGTTCA 60.250 55.000 0.00 0.00 37.00 3.18
90 91 0.250338 ACTGAAGGCCCAGTTCGTTC 60.250 55.000 8.70 0.48 44.32 3.95
91 92 0.250338 GACTGAAGGCCCAGTTCGTT 60.250 55.000 14.91 0.00 46.45 3.85
92 93 1.371558 GACTGAAGGCCCAGTTCGT 59.628 57.895 14.91 7.92 46.45 3.85
93 94 1.738099 CGACTGAAGGCCCAGTTCG 60.738 63.158 14.91 14.63 46.45 3.95
94 95 2.035442 GCGACTGAAGGCCCAGTTC 61.035 63.158 14.91 6.21 46.45 3.01
95 96 2.032681 GCGACTGAAGGCCCAGTT 59.967 61.111 14.91 0.00 46.45 3.16
102 103 4.785453 GGCCTGGGCGACTGAAGG 62.785 72.222 3.84 1.29 43.06 3.46
103 104 4.785453 GGGCCTGGGCGACTGAAG 62.785 72.222 14.63 0.00 43.06 3.02
118 119 0.319900 CTAATCGATCGTGCCTGGGG 60.320 60.000 15.94 0.00 0.00 4.96
119 120 0.673985 TCTAATCGATCGTGCCTGGG 59.326 55.000 15.94 0.96 0.00 4.45
120 121 1.932604 GCTCTAATCGATCGTGCCTGG 60.933 57.143 15.94 4.46 0.00 4.45
121 122 1.413382 GCTCTAATCGATCGTGCCTG 58.587 55.000 15.94 3.52 0.00 4.85
122 123 0.039978 CGCTCTAATCGATCGTGCCT 60.040 55.000 15.94 0.81 0.00 4.75
123 124 0.040336 TCGCTCTAATCGATCGTGCC 60.040 55.000 15.94 0.00 33.28 5.01
124 125 1.322865 CTCGCTCTAATCGATCGTGC 58.677 55.000 15.94 9.81 35.25 5.34
125 126 2.672188 ACTCGCTCTAATCGATCGTG 57.328 50.000 15.94 1.07 35.25 4.35
126 127 2.873472 AGAACTCGCTCTAATCGATCGT 59.127 45.455 15.94 0.00 35.25 3.73
127 128 3.529634 AGAACTCGCTCTAATCGATCG 57.470 47.619 9.36 9.36 35.25 3.69
128 129 4.849883 TCAAGAACTCGCTCTAATCGATC 58.150 43.478 0.00 0.00 35.25 3.69
129 130 4.902443 TCAAGAACTCGCTCTAATCGAT 57.098 40.909 0.00 0.00 35.25 3.59
130 131 4.902443 ATCAAGAACTCGCTCTAATCGA 57.098 40.909 0.00 0.00 34.52 3.59
131 132 4.145585 CGAATCAAGAACTCGCTCTAATCG 59.854 45.833 0.00 0.00 0.00 3.34
132 133 5.038033 ACGAATCAAGAACTCGCTCTAATC 58.962 41.667 0.00 0.00 36.03 1.75
133 134 5.000012 ACGAATCAAGAACTCGCTCTAAT 58.000 39.130 0.00 0.00 36.03 1.73
134 135 4.413087 GACGAATCAAGAACTCGCTCTAA 58.587 43.478 0.00 0.00 36.03 2.10
135 136 3.485381 CGACGAATCAAGAACTCGCTCTA 60.485 47.826 0.00 0.00 36.03 2.43
136 137 2.729467 CGACGAATCAAGAACTCGCTCT 60.729 50.000 0.00 0.00 36.03 4.09
137 138 1.579808 CGACGAATCAAGAACTCGCTC 59.420 52.381 0.00 3.01 36.03 5.03
138 139 1.199327 TCGACGAATCAAGAACTCGCT 59.801 47.619 0.00 0.00 36.03 4.93
139 140 1.614385 TCGACGAATCAAGAACTCGC 58.386 50.000 0.00 0.00 36.03 5.03
140 141 3.912563 TCTTTCGACGAATCAAGAACTCG 59.087 43.478 11.71 4.11 38.53 4.18
141 142 5.220303 CCATCTTTCGACGAATCAAGAACTC 60.220 44.000 11.71 0.00 0.00 3.01
142 143 4.627467 CCATCTTTCGACGAATCAAGAACT 59.373 41.667 11.71 0.00 0.00 3.01
143 144 4.725169 GCCATCTTTCGACGAATCAAGAAC 60.725 45.833 11.71 2.79 0.00 3.01
144 145 3.370978 GCCATCTTTCGACGAATCAAGAA 59.629 43.478 11.71 0.00 0.00 2.52
145 146 2.930040 GCCATCTTTCGACGAATCAAGA 59.070 45.455 11.71 11.70 0.00 3.02
146 147 2.932614 AGCCATCTTTCGACGAATCAAG 59.067 45.455 11.71 6.28 0.00 3.02
147 148 2.672874 CAGCCATCTTTCGACGAATCAA 59.327 45.455 11.71 0.37 0.00 2.57
148 149 2.270923 CAGCCATCTTTCGACGAATCA 58.729 47.619 11.71 1.14 0.00 2.57
149 150 1.594862 CCAGCCATCTTTCGACGAATC 59.405 52.381 11.71 0.00 0.00 2.52
150 151 1.066143 ACCAGCCATCTTTCGACGAAT 60.066 47.619 11.71 0.00 0.00 3.34
151 152 0.320374 ACCAGCCATCTTTCGACGAA 59.680 50.000 6.10 6.10 0.00 3.85
152 153 0.320374 AACCAGCCATCTTTCGACGA 59.680 50.000 0.00 0.00 0.00 4.20
153 154 0.721718 GAACCAGCCATCTTTCGACG 59.278 55.000 0.00 0.00 0.00 5.12
154 155 0.721718 CGAACCAGCCATCTTTCGAC 59.278 55.000 0.00 0.00 42.72 4.20
155 156 1.019278 GCGAACCAGCCATCTTTCGA 61.019 55.000 6.75 0.00 42.72 3.71
156 157 1.425428 GCGAACCAGCCATCTTTCG 59.575 57.895 0.00 0.00 42.91 3.46
176 177 2.202570 AATCCGAGTCCGCGAACG 60.203 61.111 8.23 7.46 39.67 3.95
177 178 0.458025 AAGAATCCGAGTCCGCGAAC 60.458 55.000 8.23 0.00 0.00 3.95
178 179 0.457853 CAAGAATCCGAGTCCGCGAA 60.458 55.000 8.23 0.00 0.00 4.70
179 180 1.138883 CAAGAATCCGAGTCCGCGA 59.861 57.895 8.23 0.00 0.00 5.87
180 181 1.878522 CCAAGAATCCGAGTCCGCG 60.879 63.158 0.00 0.00 0.00 6.46
181 182 0.391263 AACCAAGAATCCGAGTCCGC 60.391 55.000 0.00 0.00 0.00 5.54
182 183 2.000447 GAAACCAAGAATCCGAGTCCG 59.000 52.381 0.00 0.00 0.00 4.79
183 184 3.336138 AGAAACCAAGAATCCGAGTCC 57.664 47.619 0.00 0.00 0.00 3.85
184 185 3.120165 GCAAGAAACCAAGAATCCGAGTC 60.120 47.826 0.00 0.00 0.00 3.36
185 186 2.814336 GCAAGAAACCAAGAATCCGAGT 59.186 45.455 0.00 0.00 0.00 4.18
186 187 2.162408 GGCAAGAAACCAAGAATCCGAG 59.838 50.000 0.00 0.00 0.00 4.63
187 188 2.159382 GGCAAGAAACCAAGAATCCGA 58.841 47.619 0.00 0.00 0.00 4.55
188 189 1.885887 TGGCAAGAAACCAAGAATCCG 59.114 47.619 0.00 0.00 33.12 4.18
195 196 2.733956 ACAGAGTTGGCAAGAAACCAA 58.266 42.857 0.00 0.00 44.86 3.67
196 197 2.435372 ACAGAGTTGGCAAGAAACCA 57.565 45.000 0.00 0.00 34.65 3.67
197 198 2.952310 AGAACAGAGTTGGCAAGAAACC 59.048 45.455 0.00 0.00 0.00 3.27
198 199 4.096382 TGAAGAACAGAGTTGGCAAGAAAC 59.904 41.667 0.00 0.00 0.00 2.78
199 200 4.269183 TGAAGAACAGAGTTGGCAAGAAA 58.731 39.130 0.00 0.00 0.00 2.52
200 201 3.884895 TGAAGAACAGAGTTGGCAAGAA 58.115 40.909 0.00 0.00 0.00 2.52
201 202 3.558931 TGAAGAACAGAGTTGGCAAGA 57.441 42.857 0.00 0.00 0.00 3.02
202 203 4.843220 ATTGAAGAACAGAGTTGGCAAG 57.157 40.909 0.00 0.00 0.00 4.01
203 204 5.591099 GAAATTGAAGAACAGAGTTGGCAA 58.409 37.500 0.00 0.00 0.00 4.52
204 205 4.261155 CGAAATTGAAGAACAGAGTTGGCA 60.261 41.667 0.00 0.00 0.00 4.92
205 206 4.222114 CGAAATTGAAGAACAGAGTTGGC 58.778 43.478 0.00 0.00 0.00 4.52
206 207 4.222114 GCGAAATTGAAGAACAGAGTTGG 58.778 43.478 0.00 0.00 0.00 3.77
207 208 4.222114 GGCGAAATTGAAGAACAGAGTTG 58.778 43.478 0.00 0.00 0.00 3.16
208 209 3.058914 CGGCGAAATTGAAGAACAGAGTT 60.059 43.478 0.00 0.00 0.00 3.01
209 210 2.480419 CGGCGAAATTGAAGAACAGAGT 59.520 45.455 0.00 0.00 0.00 3.24
210 211 2.480419 ACGGCGAAATTGAAGAACAGAG 59.520 45.455 16.62 0.00 0.00 3.35
211 212 2.223144 CACGGCGAAATTGAAGAACAGA 59.777 45.455 16.62 0.00 0.00 3.41
212 213 2.574322 CACGGCGAAATTGAAGAACAG 58.426 47.619 16.62 0.00 0.00 3.16
213 214 1.334599 GCACGGCGAAATTGAAGAACA 60.335 47.619 16.62 0.00 0.00 3.18
214 215 1.327507 GCACGGCGAAATTGAAGAAC 58.672 50.000 16.62 0.00 0.00 3.01
215 216 3.765349 GCACGGCGAAATTGAAGAA 57.235 47.368 16.62 0.00 0.00 2.52
227 228 1.509162 GTGATCGAAAACGCACGGC 60.509 57.895 0.00 0.00 0.00 5.68
228 229 0.233590 TTGTGATCGAAAACGCACGG 59.766 50.000 0.00 0.00 34.12 4.94
229 230 2.011932 TTTGTGATCGAAAACGCACG 57.988 45.000 0.00 0.00 34.12 5.34
230 231 4.429812 CGAAATTTGTGATCGAAAACGCAC 60.430 41.667 0.00 0.00 38.82 5.34
231 232 3.661728 CGAAATTTGTGATCGAAAACGCA 59.338 39.130 0.00 0.00 38.82 5.24
232 233 3.478125 GCGAAATTTGTGATCGAAAACGC 60.478 43.478 0.00 15.81 38.82 4.84
233 234 3.057609 GGCGAAATTTGTGATCGAAAACG 59.942 43.478 0.00 0.00 38.82 3.60
234 235 3.363724 GGGCGAAATTTGTGATCGAAAAC 59.636 43.478 0.00 0.00 38.82 2.43
235 236 3.254657 AGGGCGAAATTTGTGATCGAAAA 59.745 39.130 0.00 0.00 38.82 2.29
236 237 2.817258 AGGGCGAAATTTGTGATCGAAA 59.183 40.909 0.00 0.00 38.82 3.46
237 238 2.161410 CAGGGCGAAATTTGTGATCGAA 59.839 45.455 0.00 0.00 38.82 3.71
238 239 1.737236 CAGGGCGAAATTTGTGATCGA 59.263 47.619 0.00 0.00 38.82 3.59
239 240 1.795162 GCAGGGCGAAATTTGTGATCG 60.795 52.381 0.00 0.00 39.47 3.69
240 241 1.913317 GCAGGGCGAAATTTGTGATC 58.087 50.000 0.00 0.00 0.00 2.92
253 254 1.660560 ATCACAGAATTGCGCAGGGC 61.661 55.000 11.31 1.58 43.96 5.19
254 255 0.379669 GATCACAGAATTGCGCAGGG 59.620 55.000 11.31 0.00 0.00 4.45
255 256 0.027194 CGATCACAGAATTGCGCAGG 59.973 55.000 11.31 1.69 0.00 4.85
256 257 0.588233 GCGATCACAGAATTGCGCAG 60.588 55.000 11.31 0.00 43.45 5.18
257 258 1.425031 GCGATCACAGAATTGCGCA 59.575 52.632 5.66 5.66 43.45 6.09
258 259 4.275282 GCGATCACAGAATTGCGC 57.725 55.556 0.00 0.00 37.60 6.09
260 261 1.333524 CCATCGCGATCACAGAATTGC 60.334 52.381 20.85 0.00 33.42 3.56
261 262 1.333524 GCCATCGCGATCACAGAATTG 60.334 52.381 20.85 6.07 0.00 2.32
262 263 0.940126 GCCATCGCGATCACAGAATT 59.060 50.000 20.85 0.00 0.00 2.17
263 264 0.105593 AGCCATCGCGATCACAGAAT 59.894 50.000 20.85 0.00 41.18 2.40
264 265 0.108186 AAGCCATCGCGATCACAGAA 60.108 50.000 20.85 0.00 41.18 3.02
265 266 0.108186 AAAGCCATCGCGATCACAGA 60.108 50.000 20.85 0.00 41.18 3.41
266 267 0.027194 CAAAGCCATCGCGATCACAG 59.973 55.000 20.85 7.99 41.18 3.66
267 268 1.368345 CCAAAGCCATCGCGATCACA 61.368 55.000 20.85 0.00 41.18 3.58
268 269 1.353103 CCAAAGCCATCGCGATCAC 59.647 57.895 20.85 14.22 41.18 3.06
269 270 1.819208 CCCAAAGCCATCGCGATCA 60.819 57.895 20.85 0.00 41.18 2.92
270 271 1.376609 AACCCAAAGCCATCGCGATC 61.377 55.000 20.85 9.37 41.18 3.69
271 272 1.376609 GAACCCAAAGCCATCGCGAT 61.377 55.000 17.62 17.62 41.18 4.58
272 273 2.033448 AACCCAAAGCCATCGCGA 59.967 55.556 13.09 13.09 41.18 5.87
273 274 1.586154 AAGAACCCAAAGCCATCGCG 61.586 55.000 0.00 0.00 41.18 5.87
274 275 0.109132 CAAGAACCCAAAGCCATCGC 60.109 55.000 0.00 0.00 0.00 4.58
275 276 1.470098 CTCAAGAACCCAAAGCCATCG 59.530 52.381 0.00 0.00 0.00 3.84
276 277 1.203287 GCTCAAGAACCCAAAGCCATC 59.797 52.381 0.00 0.00 0.00 3.51
277 278 1.260544 GCTCAAGAACCCAAAGCCAT 58.739 50.000 0.00 0.00 0.00 4.40
278 279 1.172180 CGCTCAAGAACCCAAAGCCA 61.172 55.000 0.00 0.00 0.00 4.75
279 280 1.581447 CGCTCAAGAACCCAAAGCC 59.419 57.895 0.00 0.00 0.00 4.35
280 281 1.581447 CCGCTCAAGAACCCAAAGC 59.419 57.895 0.00 0.00 0.00 3.51
281 282 1.866853 GCCCGCTCAAGAACCCAAAG 61.867 60.000 0.00 0.00 0.00 2.77
282 283 1.901464 GCCCGCTCAAGAACCCAAA 60.901 57.895 0.00 0.00 0.00 3.28
283 284 2.282180 GCCCGCTCAAGAACCCAA 60.282 61.111 0.00 0.00 0.00 4.12
284 285 4.697756 CGCCCGCTCAAGAACCCA 62.698 66.667 0.00 0.00 0.00 4.51
285 286 4.699522 ACGCCCGCTCAAGAACCC 62.700 66.667 0.00 0.00 0.00 4.11
286 287 2.668550 AACGCCCGCTCAAGAACC 60.669 61.111 0.00 0.00 0.00 3.62
287 288 2.677979 GGAACGCCCGCTCAAGAAC 61.678 63.158 0.00 0.00 0.00 3.01
288 289 2.358247 GGAACGCCCGCTCAAGAA 60.358 61.111 0.00 0.00 0.00 2.52
289 290 1.537814 TAAGGAACGCCCGCTCAAGA 61.538 55.000 0.00 0.00 40.87 3.02
290 291 0.672401 TTAAGGAACGCCCGCTCAAG 60.672 55.000 0.00 0.00 40.87 3.02
291 292 0.035820 ATTAAGGAACGCCCGCTCAA 60.036 50.000 0.00 0.00 40.87 3.02
292 293 0.035820 AATTAAGGAACGCCCGCTCA 60.036 50.000 0.00 0.00 40.87 4.26
293 294 1.092348 AAATTAAGGAACGCCCGCTC 58.908 50.000 0.00 0.00 40.87 5.03
294 295 0.808755 CAAATTAAGGAACGCCCGCT 59.191 50.000 0.00 0.00 40.87 5.52
295 296 0.800683 GCAAATTAAGGAACGCCCGC 60.801 55.000 0.00 0.00 40.87 6.13
296 297 0.523966 TGCAAATTAAGGAACGCCCG 59.476 50.000 0.00 0.00 40.87 6.13
297 298 2.481276 GGATGCAAATTAAGGAACGCCC 60.481 50.000 0.00 0.00 33.31 6.13
298 299 2.481276 GGGATGCAAATTAAGGAACGCC 60.481 50.000 0.00 0.00 0.00 5.68
299 300 2.481276 GGGGATGCAAATTAAGGAACGC 60.481 50.000 0.00 0.00 0.00 4.84
300 301 2.757868 TGGGGATGCAAATTAAGGAACG 59.242 45.455 0.00 0.00 0.00 3.95
301 302 6.267471 TGATATGGGGATGCAAATTAAGGAAC 59.733 38.462 0.00 0.00 0.00 3.62
302 303 6.380414 TGATATGGGGATGCAAATTAAGGAA 58.620 36.000 0.00 0.00 0.00 3.36
303 304 5.963092 TGATATGGGGATGCAAATTAAGGA 58.037 37.500 0.00 0.00 0.00 3.36
304 305 6.012113 TCTGATATGGGGATGCAAATTAAGG 58.988 40.000 0.00 0.00 0.00 2.69
305 306 7.395206 TGATCTGATATGGGGATGCAAATTAAG 59.605 37.037 0.00 0.00 0.00 1.85
306 307 7.240167 TGATCTGATATGGGGATGCAAATTAA 58.760 34.615 0.00 0.00 0.00 1.40
307 308 6.792424 TGATCTGATATGGGGATGCAAATTA 58.208 36.000 0.00 0.00 0.00 1.40
308 309 5.647230 TGATCTGATATGGGGATGCAAATT 58.353 37.500 0.00 0.00 0.00 1.82
309 310 5.265290 TGATCTGATATGGGGATGCAAAT 57.735 39.130 0.00 0.00 0.00 2.32
310 311 4.727792 TGATCTGATATGGGGATGCAAA 57.272 40.909 0.00 0.00 0.00 3.68
311 312 4.940468 ATGATCTGATATGGGGATGCAA 57.060 40.909 0.00 0.00 0.00 4.08
312 313 4.624604 CGAATGATCTGATATGGGGATGCA 60.625 45.833 0.00 0.00 0.00 3.96
313 314 3.875727 CGAATGATCTGATATGGGGATGC 59.124 47.826 0.00 0.00 0.00 3.91
314 315 4.874396 CACGAATGATCTGATATGGGGATG 59.126 45.833 0.00 0.00 0.00 3.51
315 316 4.624843 GCACGAATGATCTGATATGGGGAT 60.625 45.833 0.00 0.00 0.00 3.85
316 317 3.306989 GCACGAATGATCTGATATGGGGA 60.307 47.826 0.00 0.00 0.00 4.81
317 318 3.005554 GCACGAATGATCTGATATGGGG 58.994 50.000 0.00 0.00 0.00 4.96
318 319 3.931468 GAGCACGAATGATCTGATATGGG 59.069 47.826 0.00 0.00 38.27 4.00
319 320 4.563061 TGAGCACGAATGATCTGATATGG 58.437 43.478 0.00 0.00 42.02 2.74
320 321 5.638234 ACATGAGCACGAATGATCTGATATG 59.362 40.000 0.00 0.00 42.02 1.78
321 322 5.791666 ACATGAGCACGAATGATCTGATAT 58.208 37.500 0.00 0.00 42.02 1.63
322 323 5.205759 ACATGAGCACGAATGATCTGATA 57.794 39.130 0.00 0.00 42.02 2.15
323 324 4.069300 ACATGAGCACGAATGATCTGAT 57.931 40.909 0.00 0.00 42.02 2.90
324 325 3.531934 ACATGAGCACGAATGATCTGA 57.468 42.857 0.00 0.00 42.02 3.27
325 326 4.331992 AGAAACATGAGCACGAATGATCTG 59.668 41.667 0.00 0.00 42.02 2.90
326 327 4.511527 AGAAACATGAGCACGAATGATCT 58.488 39.130 0.00 0.00 42.02 2.75
327 328 4.871993 AGAAACATGAGCACGAATGATC 57.128 40.909 0.00 0.00 41.86 2.92
328 329 6.018425 GTGATAGAAACATGAGCACGAATGAT 60.018 38.462 0.00 0.00 0.00 2.45
329 330 5.291858 GTGATAGAAACATGAGCACGAATGA 59.708 40.000 0.00 0.00 0.00 2.57
330 331 5.292834 AGTGATAGAAACATGAGCACGAATG 59.707 40.000 0.00 0.00 0.00 2.67
331 332 5.423015 AGTGATAGAAACATGAGCACGAAT 58.577 37.500 0.00 0.00 0.00 3.34
332 333 4.820897 AGTGATAGAAACATGAGCACGAA 58.179 39.130 0.00 0.00 0.00 3.85
333 334 4.456280 AGTGATAGAAACATGAGCACGA 57.544 40.909 0.00 0.00 0.00 4.35
334 335 5.106948 ACAAAGTGATAGAAACATGAGCACG 60.107 40.000 0.00 0.00 0.00 5.34
335 336 6.246420 ACAAAGTGATAGAAACATGAGCAC 57.754 37.500 0.00 0.00 0.00 4.40
336 337 6.882610 AACAAAGTGATAGAAACATGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
337 338 6.521133 CGAAACAAAGTGATAGAAACATGAGC 59.479 38.462 0.00 0.00 0.00 4.26
338 339 6.521133 GCGAAACAAAGTGATAGAAACATGAG 59.479 38.462 0.00 0.00 0.00 2.90
339 340 6.017523 TGCGAAACAAAGTGATAGAAACATGA 60.018 34.615 0.00 0.00 0.00 3.07
340 341 6.142139 TGCGAAACAAAGTGATAGAAACATG 58.858 36.000 0.00 0.00 0.00 3.21
341 342 6.312399 TGCGAAACAAAGTGATAGAAACAT 57.688 33.333 0.00 0.00 0.00 2.71
342 343 5.743026 TGCGAAACAAAGTGATAGAAACA 57.257 34.783 0.00 0.00 0.00 2.83
343 344 4.613031 GCTGCGAAACAAAGTGATAGAAAC 59.387 41.667 0.00 0.00 0.00 2.78
344 345 4.515191 AGCTGCGAAACAAAGTGATAGAAA 59.485 37.500 0.00 0.00 0.00 2.52
345 346 4.065088 AGCTGCGAAACAAAGTGATAGAA 58.935 39.130 0.00 0.00 0.00 2.10
346 347 3.664107 AGCTGCGAAACAAAGTGATAGA 58.336 40.909 0.00 0.00 0.00 1.98
347 348 3.181516 GGAGCTGCGAAACAAAGTGATAG 60.182 47.826 0.00 0.00 0.00 2.08
348 349 2.742053 GGAGCTGCGAAACAAAGTGATA 59.258 45.455 0.00 0.00 0.00 2.15
349 350 1.537202 GGAGCTGCGAAACAAAGTGAT 59.463 47.619 0.00 0.00 0.00 3.06
350 351 0.944386 GGAGCTGCGAAACAAAGTGA 59.056 50.000 0.00 0.00 0.00 3.41
351 352 0.040067 GGGAGCTGCGAAACAAAGTG 60.040 55.000 0.00 0.00 0.00 3.16
352 353 0.465460 TGGGAGCTGCGAAACAAAGT 60.465 50.000 0.00 0.00 0.00 2.66
353 354 0.883833 ATGGGAGCTGCGAAACAAAG 59.116 50.000 0.00 0.00 0.00 2.77
354 355 0.881118 GATGGGAGCTGCGAAACAAA 59.119 50.000 0.00 0.00 0.00 2.83
355 356 0.960364 GGATGGGAGCTGCGAAACAA 60.960 55.000 0.00 0.00 0.00 2.83
356 357 1.377202 GGATGGGAGCTGCGAAACA 60.377 57.895 0.00 0.00 0.00 2.83
357 358 2.115291 GGGATGGGAGCTGCGAAAC 61.115 63.158 0.00 0.00 0.00 2.78
358 359 2.272146 GGGATGGGAGCTGCGAAA 59.728 61.111 0.00 0.00 0.00 3.46
359 360 3.008517 TGGGATGGGAGCTGCGAA 61.009 61.111 0.00 0.00 0.00 4.70
360 361 3.473647 CTGGGATGGGAGCTGCGA 61.474 66.667 0.00 0.00 0.00 5.10
361 362 4.559063 CCTGGGATGGGAGCTGCG 62.559 72.222 0.00 0.00 0.00 5.18
362 363 3.092511 TCCTGGGATGGGAGCTGC 61.093 66.667 0.00 0.00 0.00 5.25
363 364 3.238438 CTCCTGGGATGGGAGCTG 58.762 66.667 0.00 0.00 42.95 4.24
367 368 1.075525 CCGTACTCCTGGGATGGGA 60.076 63.158 0.00 0.00 0.00 4.37
368 369 2.808206 GCCGTACTCCTGGGATGGG 61.808 68.421 0.00 0.00 0.00 4.00
369 370 1.338136 AAGCCGTACTCCTGGGATGG 61.338 60.000 0.00 0.00 0.00 3.51
370 371 0.179073 CAAGCCGTACTCCTGGGATG 60.179 60.000 0.00 0.00 0.00 3.51
371 372 1.972660 GCAAGCCGTACTCCTGGGAT 61.973 60.000 0.00 0.00 0.00 3.85
372 373 2.656069 GCAAGCCGTACTCCTGGGA 61.656 63.158 0.00 0.00 0.00 4.37
373 374 2.125106 GCAAGCCGTACTCCTGGG 60.125 66.667 0.00 0.00 0.00 4.45
374 375 2.509336 CGCAAGCCGTACTCCTGG 60.509 66.667 0.00 0.00 0.00 4.45
375 376 2.509336 CCGCAAGCCGTACTCCTG 60.509 66.667 0.00 0.00 34.38 3.86
376 377 4.452733 GCCGCAAGCCGTACTCCT 62.453 66.667 0.00 0.00 34.35 3.69
406 407 3.130160 CAGCCTTGGCTTCCTCGC 61.130 66.667 11.99 0.00 0.00 5.03
407 408 2.437359 CCAGCCTTGGCTTCCTCG 60.437 66.667 11.99 0.13 37.73 4.63
429 430 4.914420 CTCGTAGCCTCCGCAGCG 62.914 72.222 8.18 8.18 37.52 5.18
430 431 3.827898 ACTCGTAGCCTCCGCAGC 61.828 66.667 0.00 0.00 37.52 5.25
431 432 2.103143 CACTCGTAGCCTCCGCAG 59.897 66.667 0.00 0.00 37.52 5.18
432 433 3.449227 CCACTCGTAGCCTCCGCA 61.449 66.667 0.00 0.00 37.52 5.69
433 434 4.208686 CCCACTCGTAGCCTCCGC 62.209 72.222 0.00 0.00 0.00 5.54
434 435 2.754658 ACCCACTCGTAGCCTCCG 60.755 66.667 0.00 0.00 0.00 4.63
435 436 2.893398 CACCCACTCGTAGCCTCC 59.107 66.667 0.00 0.00 0.00 4.30
436 437 2.184579 GCACCCACTCGTAGCCTC 59.815 66.667 0.00 0.00 0.00 4.70
437 438 2.283966 AGCACCCACTCGTAGCCT 60.284 61.111 0.00 0.00 0.00 4.58
438 439 2.184579 GAGCACCCACTCGTAGCC 59.815 66.667 0.00 0.00 0.00 3.93
444 445 2.574399 GGAGTCGAGCACCCACTC 59.426 66.667 0.00 0.00 36.58 3.51
445 446 2.997897 GGGAGTCGAGCACCCACT 60.998 66.667 14.26 0.00 45.92 4.00
446 447 4.436998 CGGGAGTCGAGCACCCAC 62.437 72.222 17.74 0.00 46.85 4.61
447 448 4.671590 TCGGGAGTCGAGCACCCA 62.672 66.667 17.74 6.12 46.85 4.51
456 457 3.934391 CTTGGGCGTGTCGGGAGTC 62.934 68.421 0.00 0.00 0.00 3.36
457 458 4.003788 CTTGGGCGTGTCGGGAGT 62.004 66.667 0.00 0.00 0.00 3.85
484 485 4.821589 GAGGGACTTCGCCGGCAG 62.822 72.222 28.98 20.01 41.55 4.85
487 488 4.452733 GTGGAGGGACTTCGCCGG 62.453 72.222 0.00 0.00 38.85 6.13
488 489 3.691342 TGTGGAGGGACTTCGCCG 61.691 66.667 0.00 0.00 45.60 6.46
489 490 2.047179 GTGTGGAGGGACTTCGCC 60.047 66.667 0.00 0.00 45.60 5.54
490 491 2.047179 GGTGTGGAGGGACTTCGC 60.047 66.667 0.00 0.00 46.55 4.70
491 492 1.004918 GTGGTGTGGAGGGACTTCG 60.005 63.158 0.00 0.00 41.55 3.79
492 493 0.250338 GTGTGGTGTGGAGGGACTTC 60.250 60.000 0.00 0.00 41.55 3.01
493 494 0.694444 AGTGTGGTGTGGAGGGACTT 60.694 55.000 0.00 0.00 41.55 3.01
495 496 1.071471 CAGTGTGGTGTGGAGGGAC 59.929 63.158 0.00 0.00 0.00 4.46
496 497 0.692756 TTCAGTGTGGTGTGGAGGGA 60.693 55.000 0.00 0.00 0.00 4.20
497 498 0.535102 GTTCAGTGTGGTGTGGAGGG 60.535 60.000 0.00 0.00 0.00 4.30
498 499 0.469917 AGTTCAGTGTGGTGTGGAGG 59.530 55.000 0.00 0.00 0.00 4.30
499 500 2.332063 AAGTTCAGTGTGGTGTGGAG 57.668 50.000 0.00 0.00 0.00 3.86
500 501 2.238646 AGAAAGTTCAGTGTGGTGTGGA 59.761 45.455 0.00 0.00 0.00 4.02
501 502 2.355756 CAGAAAGTTCAGTGTGGTGTGG 59.644 50.000 0.00 0.00 0.00 4.17
502 503 2.355756 CCAGAAAGTTCAGTGTGGTGTG 59.644 50.000 0.00 0.00 0.00 3.82
503 504 2.026262 ACCAGAAAGTTCAGTGTGGTGT 60.026 45.455 0.00 0.00 36.92 4.16
504 505 2.355756 CACCAGAAAGTTCAGTGTGGTG 59.644 50.000 11.18 11.18 46.54 4.17
505 506 2.238646 TCACCAGAAAGTTCAGTGTGGT 59.761 45.455 11.64 5.78 38.88 4.16
506 507 2.874701 CTCACCAGAAAGTTCAGTGTGG 59.125 50.000 11.64 5.28 36.05 4.17
507 508 3.797039 TCTCACCAGAAAGTTCAGTGTG 58.203 45.455 11.64 10.13 36.05 3.82
508 509 4.487714 TTCTCACCAGAAAGTTCAGTGT 57.512 40.909 11.64 0.00 35.57 3.55
509 510 5.059161 TCATTCTCACCAGAAAGTTCAGTG 58.941 41.667 7.54 7.54 42.14 3.66
510 511 5.296151 TCATTCTCACCAGAAAGTTCAGT 57.704 39.130 0.00 0.00 42.14 3.41
511 512 4.694509 CCTCATTCTCACCAGAAAGTTCAG 59.305 45.833 0.00 0.00 42.14 3.02
512 513 4.347876 TCCTCATTCTCACCAGAAAGTTCA 59.652 41.667 0.00 0.00 42.14 3.18
513 514 4.899502 TCCTCATTCTCACCAGAAAGTTC 58.100 43.478 0.00 0.00 42.14 3.01
514 515 4.982241 TCCTCATTCTCACCAGAAAGTT 57.018 40.909 0.00 0.00 42.14 2.66
515 516 4.080638 GGATCCTCATTCTCACCAGAAAGT 60.081 45.833 3.84 0.00 42.14 2.66
516 517 4.163839 AGGATCCTCATTCTCACCAGAAAG 59.836 45.833 9.02 0.00 42.14 2.62
517 518 4.107072 AGGATCCTCATTCTCACCAGAAA 58.893 43.478 9.02 0.00 42.14 2.52
518 519 3.708631 GAGGATCCTCATTCTCACCAGAA 59.291 47.826 32.90 0.00 42.31 3.02
519 520 3.052262 AGAGGATCCTCATTCTCACCAGA 60.052 47.826 37.28 0.00 44.99 3.86
520 521 3.307506 AGAGGATCCTCATTCTCACCAG 58.692 50.000 37.28 0.00 44.99 4.00
521 522 3.303938 GAGAGGATCCTCATTCTCACCA 58.696 50.000 37.28 0.00 44.99 4.17
522 523 2.632512 GGAGAGGATCCTCATTCTCACC 59.367 54.545 37.28 23.87 45.64 4.02
534 535 1.841103 GGCAGGGGAGGAGAGGATC 60.841 68.421 0.00 0.00 0.00 3.36
535 536 1.907470 AAGGCAGGGGAGGAGAGGAT 61.907 60.000 0.00 0.00 0.00 3.24
536 537 1.228920 TAAGGCAGGGGAGGAGAGGA 61.229 60.000 0.00 0.00 0.00 3.71
537 538 0.762461 CTAAGGCAGGGGAGGAGAGG 60.762 65.000 0.00 0.00 0.00 3.69
538 539 0.263172 TCTAAGGCAGGGGAGGAGAG 59.737 60.000 0.00 0.00 0.00 3.20
539 540 0.032017 GTCTAAGGCAGGGGAGGAGA 60.032 60.000 0.00 0.00 0.00 3.71
540 541 0.325671 TGTCTAAGGCAGGGGAGGAG 60.326 60.000 0.00 0.00 0.00 3.69
541 542 0.617820 GTGTCTAAGGCAGGGGAGGA 60.618 60.000 0.00 0.00 0.00 3.71
542 543 1.908483 GTGTCTAAGGCAGGGGAGG 59.092 63.158 0.00 0.00 0.00 4.30
543 544 1.517832 CGTGTCTAAGGCAGGGGAG 59.482 63.158 0.00 0.00 0.00 4.30
544 545 2.656069 GCGTGTCTAAGGCAGGGGA 61.656 63.158 0.00 0.00 39.53 4.81
545 546 2.125106 GCGTGTCTAAGGCAGGGG 60.125 66.667 0.00 0.00 39.53 4.79
546 547 2.125106 GGCGTGTCTAAGGCAGGG 60.125 66.667 0.00 0.00 41.59 4.45
547 548 0.392998 AATGGCGTGTCTAAGGCAGG 60.393 55.000 0.00 0.00 43.34 4.85
548 549 1.131126 CAAATGGCGTGTCTAAGGCAG 59.869 52.381 0.00 0.00 43.34 4.85
549 550 1.164411 CAAATGGCGTGTCTAAGGCA 58.836 50.000 0.00 0.00 44.12 4.75
550 551 1.165270 ACAAATGGCGTGTCTAAGGC 58.835 50.000 0.00 0.00 39.00 4.35
551 552 3.915437 AAACAAATGGCGTGTCTAAGG 57.085 42.857 0.00 0.00 0.00 2.69
552 553 6.861055 ACAATAAAACAAATGGCGTGTCTAAG 59.139 34.615 0.00 0.00 0.00 2.18
553 554 6.740110 ACAATAAAACAAATGGCGTGTCTAA 58.260 32.000 0.00 0.00 0.00 2.10
554 555 6.320494 ACAATAAAACAAATGGCGTGTCTA 57.680 33.333 0.00 0.00 0.00 2.59
555 556 5.195001 ACAATAAAACAAATGGCGTGTCT 57.805 34.783 0.00 0.00 0.00 3.41
556 557 4.384547 GGACAATAAAACAAATGGCGTGTC 59.615 41.667 0.00 0.00 33.70 3.67
557 558 4.202161 TGGACAATAAAACAAATGGCGTGT 60.202 37.500 0.00 0.00 0.00 4.49
558 559 4.302455 TGGACAATAAAACAAATGGCGTG 58.698 39.130 0.00 0.00 0.00 5.34
559 560 4.555262 CTGGACAATAAAACAAATGGCGT 58.445 39.130 0.00 0.00 0.00 5.68
560 561 3.367630 GCTGGACAATAAAACAAATGGCG 59.632 43.478 0.00 0.00 0.00 5.69
561 562 4.568956 AGCTGGACAATAAAACAAATGGC 58.431 39.130 0.00 0.00 0.00 4.40
562 563 6.482973 ACAAAGCTGGACAATAAAACAAATGG 59.517 34.615 0.00 0.00 0.00 3.16
563 564 7.439056 AGACAAAGCTGGACAATAAAACAAATG 59.561 33.333 0.00 0.00 0.00 2.32
564 565 7.439056 CAGACAAAGCTGGACAATAAAACAAAT 59.561 33.333 0.00 0.00 32.26 2.32
565 566 6.756074 CAGACAAAGCTGGACAATAAAACAAA 59.244 34.615 0.00 0.00 32.26 2.83
566 567 6.127479 ACAGACAAAGCTGGACAATAAAACAA 60.127 34.615 0.00 0.00 40.20 2.83
567 568 5.359576 ACAGACAAAGCTGGACAATAAAACA 59.640 36.000 0.00 0.00 40.20 2.83
568 569 5.831997 ACAGACAAAGCTGGACAATAAAAC 58.168 37.500 0.00 0.00 40.20 2.43
569 570 6.096141 TCAACAGACAAAGCTGGACAATAAAA 59.904 34.615 0.00 0.00 40.20 1.52
570 571 5.592282 TCAACAGACAAAGCTGGACAATAAA 59.408 36.000 0.00 0.00 40.20 1.40
571 572 5.129634 TCAACAGACAAAGCTGGACAATAA 58.870 37.500 0.00 0.00 40.20 1.40
572 573 4.713553 TCAACAGACAAAGCTGGACAATA 58.286 39.130 0.00 0.00 40.20 1.90
573 574 3.554934 TCAACAGACAAAGCTGGACAAT 58.445 40.909 0.00 0.00 40.20 2.71
574 575 2.997980 TCAACAGACAAAGCTGGACAA 58.002 42.857 0.00 0.00 40.20 3.18
575 576 2.708216 TCAACAGACAAAGCTGGACA 57.292 45.000 0.00 0.00 40.20 4.02
576 577 2.880890 ACATCAACAGACAAAGCTGGAC 59.119 45.455 0.00 0.00 40.20 4.02
577 578 3.213206 ACATCAACAGACAAAGCTGGA 57.787 42.857 0.00 0.00 40.20 3.86
578 579 3.996150 AACATCAACAGACAAAGCTGG 57.004 42.857 0.00 0.00 40.20 4.85
579 580 5.911280 CAGTTAACATCAACAGACAAAGCTG 59.089 40.000 8.61 0.00 41.63 4.24
580 581 5.822519 TCAGTTAACATCAACAGACAAAGCT 59.177 36.000 8.61 0.00 0.00 3.74
581 582 6.060028 TCAGTTAACATCAACAGACAAAGC 57.940 37.500 8.61 0.00 0.00 3.51
582 583 7.919690 TCTTCAGTTAACATCAACAGACAAAG 58.080 34.615 8.61 0.00 0.00 2.77
583 584 7.552687 ACTCTTCAGTTAACATCAACAGACAAA 59.447 33.333 8.61 0.00 0.00 2.83
584 585 7.047891 ACTCTTCAGTTAACATCAACAGACAA 58.952 34.615 8.61 0.00 0.00 3.18
585 586 6.582636 ACTCTTCAGTTAACATCAACAGACA 58.417 36.000 8.61 0.00 0.00 3.41
586 587 7.484035 AACTCTTCAGTTAACATCAACAGAC 57.516 36.000 8.61 0.00 41.39 3.51
683 684 2.054799 ACAGACAAGTTGGAGGGCTAA 58.945 47.619 7.96 0.00 0.00 3.09
1424 1585 6.722328 TCTACGACCATAGTCATATCCATCT 58.278 40.000 0.00 0.00 43.73 2.90
1724 1963 3.219176 TCATGATCATGGCCTTCCTTC 57.781 47.619 30.54 0.00 39.24 3.46
2433 2815 6.239217 ACTGTTGTATCTATGGCAATCTGA 57.761 37.500 0.00 0.00 0.00 3.27
2779 3161 2.264109 GTCATCAGTGACGACGACAT 57.736 50.000 3.22 0.00 44.71 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.