Multiple sequence alignment - TraesCS2B01G403300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G403300 chr2B 100.000 6322 0 0 1 6322 571767735 571761414 0.000000e+00 11675.0
1 TraesCS2B01G403300 chr2B 97.087 103 3 0 1 103 573128760 573128862 2.340000e-39 174.0
2 TraesCS2B01G403300 chr2B 97.087 103 3 0 1 103 598556482 598556584 2.340000e-39 174.0
3 TraesCS2B01G403300 chr2B 97.222 36 1 0 3607 3642 9870468 9870503 1.900000e-05 62.1
4 TraesCS2B01G403300 chr2D 88.899 3441 188 88 344 3700 487059819 487056489 0.000000e+00 4060.0
5 TraesCS2B01G403300 chr2D 93.952 992 37 4 4316 5303 487055936 487054964 0.000000e+00 1478.0
6 TraesCS2B01G403300 chr2D 85.120 961 136 5 5368 6322 395147699 395146740 0.000000e+00 976.0
7 TraesCS2B01G403300 chr2D 81.828 963 164 9 5368 6322 175808027 175808986 0.000000e+00 798.0
8 TraesCS2B01G403300 chr2D 91.476 481 36 3 3697 4176 487056422 487055946 0.000000e+00 656.0
9 TraesCS2B01G403300 chr2D 85.520 221 14 7 130 340 487060071 487059859 1.380000e-51 215.0
10 TraesCS2B01G403300 chr2A 88.944 2605 167 51 1639 4185 632295132 632292591 0.000000e+00 3103.0
11 TraesCS2B01G403300 chr2A 95.700 1000 37 4 4307 5303 632292590 632291594 0.000000e+00 1604.0
12 TraesCS2B01G403300 chr2A 89.572 748 25 22 853 1594 632296056 632295356 0.000000e+00 900.0
13 TraesCS2B01G403300 chr2A 83.039 961 155 7 5368 6322 558923975 558924933 0.000000e+00 865.0
14 TraesCS2B01G403300 chr2A 83.269 520 30 27 344 832 632296835 632296342 5.860000e-115 425.0
15 TraesCS2B01G403300 chr2A 97.087 103 3 0 1 103 419652050 419651948 2.340000e-39 174.0
16 TraesCS2B01G403300 chr2A 87.273 110 6 4 130 239 632297141 632297040 1.110000e-22 119.0
17 TraesCS2B01G403300 chr1D 94.311 1002 54 2 5323 6322 441091683 441090683 0.000000e+00 1531.0
18 TraesCS2B01G403300 chr1D 85.113 974 136 8 5356 6322 486284119 486283148 0.000000e+00 987.0
19 TraesCS2B01G403300 chr5A 82.319 871 147 7 5456 6322 89009403 89010270 0.000000e+00 749.0
20 TraesCS2B01G403300 chr5D 78.330 946 170 27 5340 6274 520698599 520697678 4.250000e-161 579.0
21 TraesCS2B01G403300 chr7D 77.563 878 181 12 5449 6317 114710131 114711001 3.380000e-142 516.0
22 TraesCS2B01G403300 chr7D 74.941 854 192 18 5449 6293 117541255 117540415 7.740000e-99 372.0
23 TraesCS2B01G403300 chr3B 78.229 813 157 18 5495 6297 514054163 514054965 2.630000e-138 503.0
24 TraesCS2B01G403300 chr3B 92.143 140 9 2 4171 4309 466262230 466262368 5.000000e-46 196.0
25 TraesCS2B01G403300 chr3D 80.882 340 41 13 3625 3952 281599840 281600167 4.900000e-61 246.0
26 TraesCS2B01G403300 chr4B 94.203 138 6 2 4172 4309 457406175 457406040 6.420000e-50 209.0
27 TraesCS2B01G403300 chr4B 92.254 142 10 1 4168 4309 518087577 518087717 3.870000e-47 200.0
28 TraesCS2B01G403300 chr4B 97.115 104 3 0 1 104 301791462 301791359 6.510000e-40 176.0
29 TraesCS2B01G403300 chr4B 97.115 104 3 0 1 104 301845254 301845151 6.510000e-40 176.0
30 TraesCS2B01G403300 chr4B 97.115 104 3 0 1 104 301904421 301904318 6.510000e-40 176.0
31 TraesCS2B01G403300 chr4B 97.087 103 3 0 1 103 612329193 612329091 2.340000e-39 174.0
32 TraesCS2B01G403300 chr4B 95.370 108 4 1 1 108 38319185 38319079 3.030000e-38 171.0
33 TraesCS2B01G403300 chr5B 93.571 140 8 1 4170 4309 382488931 382489069 2.310000e-49 207.0
34 TraesCS2B01G403300 chr5B 95.312 128 6 0 4183 4310 660144710 660144583 2.990000e-48 204.0
35 TraesCS2B01G403300 chr1B 93.478 138 9 0 4172 4309 484200141 484200278 8.310000e-49 206.0
36 TraesCS2B01G403300 chr1B 100.000 28 0 0 3145 3172 540318554 540318581 1.100000e-02 52.8
37 TraesCS2B01G403300 chr7B 93.939 132 7 1 4178 4309 705715673 705715803 1.390000e-46 198.0
38 TraesCS2B01G403300 chr6B 92.754 138 8 2 4183 4319 101745913 101745777 1.390000e-46 198.0
39 TraesCS2B01G403300 chr4D 92.199 141 9 2 4171 4310 58389240 58389379 1.390000e-46 198.0
40 TraesCS2B01G403300 chr7A 97.087 103 3 0 1 103 668996847 668996745 2.340000e-39 174.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G403300 chr2B 571761414 571767735 6321 True 11675.00 11675 100.00000 1 6322 1 chr2B.!!$R1 6321
1 TraesCS2B01G403300 chr2D 487054964 487060071 5107 True 1602.25 4060 89.96175 130 5303 4 chr2D.!!$R2 5173
2 TraesCS2B01G403300 chr2D 395146740 395147699 959 True 976.00 976 85.12000 5368 6322 1 chr2D.!!$R1 954
3 TraesCS2B01G403300 chr2D 175808027 175808986 959 False 798.00 798 81.82800 5368 6322 1 chr2D.!!$F1 954
4 TraesCS2B01G403300 chr2A 632291594 632297141 5547 True 1230.20 3103 88.95160 130 5303 5 chr2A.!!$R2 5173
5 TraesCS2B01G403300 chr2A 558923975 558924933 958 False 865.00 865 83.03900 5368 6322 1 chr2A.!!$F1 954
6 TraesCS2B01G403300 chr1D 441090683 441091683 1000 True 1531.00 1531 94.31100 5323 6322 1 chr1D.!!$R1 999
7 TraesCS2B01G403300 chr1D 486283148 486284119 971 True 987.00 987 85.11300 5356 6322 1 chr1D.!!$R2 966
8 TraesCS2B01G403300 chr5A 89009403 89010270 867 False 749.00 749 82.31900 5456 6322 1 chr5A.!!$F1 866
9 TraesCS2B01G403300 chr5D 520697678 520698599 921 True 579.00 579 78.33000 5340 6274 1 chr5D.!!$R1 934
10 TraesCS2B01G403300 chr7D 114710131 114711001 870 False 516.00 516 77.56300 5449 6317 1 chr7D.!!$F1 868
11 TraesCS2B01G403300 chr7D 117540415 117541255 840 True 372.00 372 74.94100 5449 6293 1 chr7D.!!$R1 844
12 TraesCS2B01G403300 chr3B 514054163 514054965 802 False 503.00 503 78.22900 5495 6297 1 chr3B.!!$F2 802

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
754 899 0.035458 CTTTCGGTCTTGGCTGGAGT 59.965 55.000 0.00 0.00 0.00 3.85 F
1493 1926 0.035458 GTGGTGAAGCTAGCACTGGT 59.965 55.000 18.83 0.00 43.67 4.00 F
1789 2407 0.180406 ATGGTCCGGCAATCCTACAC 59.820 55.000 0.00 0.00 0.00 2.90 F
2760 3392 0.815734 TAAGCCTCTAGTCCACACGC 59.184 55.000 0.00 0.00 0.00 5.34 F
2799 3434 0.826062 GATTGAAACCATGGGGCCTG 59.174 55.000 18.09 0.00 37.90 4.85 F
2931 3570 1.345415 ACGGTCGTTGGGTTACAATCT 59.655 47.619 0.00 0.00 41.95 2.40 F
4198 4965 0.857675 TCATACTCCCTCCATCCGGA 59.142 55.000 6.61 6.61 39.79 5.14 F
4575 5342 0.178873 ACCACCAGACCTACCACCAT 60.179 55.000 0.00 0.00 0.00 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2042 2663 0.889994 TGCCTTGCTTTGCTATGTGG 59.110 50.000 0.00 0.00 0.00 4.17 R
2908 3543 0.032403 TGTAACCCAACGACCGTGAG 59.968 55.000 0.00 0.00 0.00 3.51 R
3716 4478 0.036765 AGGTGACGCGCATAGGAAAA 60.037 50.000 5.73 0.00 0.00 2.29 R
3863 4629 0.032952 CGTTCTGGTCTTCCGTTCCA 59.967 55.000 0.00 0.00 36.30 3.53 R
3920 4686 0.533491 TATTAGTGCGAGTGCCGGTT 59.467 50.000 1.90 0.00 41.78 4.44 R
4292 5059 1.171308 CGGTACTTCCTCCGTCTGAA 58.829 55.000 0.00 0.00 41.58 3.02 R
5306 6078 0.178068 GCCTCGGGAGTGCTTTCATA 59.822 55.000 0.00 0.00 0.00 2.15 R
5519 6294 1.143401 GCCTTGACGTAGGGTAGGC 59.857 63.158 6.51 8.05 43.96 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 7.628769 AAAAAGTAGTAGTTTTCGGGACAAA 57.371 32.000 14.61 0.00 30.05 2.83
40 41 7.628769 AAAAGTAGTAGTTTTCGGGACAAAA 57.371 32.000 9.49 0.00 0.00 2.44
41 42 7.812690 AAAGTAGTAGTTTTCGGGACAAAAT 57.187 32.000 0.00 0.00 0.00 1.82
42 43 7.430992 AAGTAGTAGTTTTCGGGACAAAATC 57.569 36.000 0.00 0.00 0.00 2.17
43 44 6.527423 AGTAGTAGTTTTCGGGACAAAATCA 58.473 36.000 0.00 0.00 0.00 2.57
44 45 7.166167 AGTAGTAGTTTTCGGGACAAAATCAT 58.834 34.615 0.00 0.00 0.00 2.45
45 46 8.316214 AGTAGTAGTTTTCGGGACAAAATCATA 58.684 33.333 0.00 0.00 0.00 2.15
46 47 7.989416 AGTAGTTTTCGGGACAAAATCATAA 57.011 32.000 0.00 0.00 0.00 1.90
47 48 8.398878 AGTAGTTTTCGGGACAAAATCATAAA 57.601 30.769 0.00 0.00 0.00 1.40
48 49 8.512138 AGTAGTTTTCGGGACAAAATCATAAAG 58.488 33.333 0.00 0.00 0.00 1.85
49 50 7.284919 AGTTTTCGGGACAAAATCATAAAGT 57.715 32.000 0.00 0.00 0.00 2.66
50 51 7.145323 AGTTTTCGGGACAAAATCATAAAGTG 58.855 34.615 0.00 0.00 0.00 3.16
51 52 5.637006 TTCGGGACAAAATCATAAAGTGG 57.363 39.130 0.00 0.00 0.00 4.00
52 53 4.658063 TCGGGACAAAATCATAAAGTGGT 58.342 39.130 0.00 0.00 0.00 4.16
53 54 5.806818 TCGGGACAAAATCATAAAGTGGTA 58.193 37.500 0.00 0.00 0.00 3.25
54 55 5.878116 TCGGGACAAAATCATAAAGTGGTAG 59.122 40.000 0.00 0.00 0.00 3.18
55 56 5.646360 CGGGACAAAATCATAAAGTGGTAGT 59.354 40.000 0.00 0.00 0.00 2.73
56 57 6.150474 CGGGACAAAATCATAAAGTGGTAGTT 59.850 38.462 0.00 0.00 0.00 2.24
57 58 7.308951 CGGGACAAAATCATAAAGTGGTAGTTT 60.309 37.037 0.00 0.00 0.00 2.66
58 59 8.364894 GGGACAAAATCATAAAGTGGTAGTTTT 58.635 33.333 0.00 0.00 0.00 2.43
59 60 9.406828 GGACAAAATCATAAAGTGGTAGTTTTC 57.593 33.333 0.00 0.00 0.00 2.29
61 62 9.965824 ACAAAATCATAAAGTGGTAGTTTTCTG 57.034 29.630 0.00 0.00 0.00 3.02
62 63 9.965824 CAAAATCATAAAGTGGTAGTTTTCTGT 57.034 29.630 0.00 0.00 0.00 3.41
64 65 8.918202 AATCATAAAGTGGTAGTTTTCTGTCA 57.082 30.769 0.00 0.00 0.00 3.58
65 66 7.724305 TCATAAAGTGGTAGTTTTCTGTCAC 57.276 36.000 0.00 0.00 35.78 3.67
66 67 6.422701 TCATAAAGTGGTAGTTTTCTGTCACG 59.577 38.462 0.00 0.00 38.33 4.35
67 68 3.814005 AGTGGTAGTTTTCTGTCACGT 57.186 42.857 0.00 0.00 38.33 4.49
68 69 4.133013 AGTGGTAGTTTTCTGTCACGTT 57.867 40.909 0.00 0.00 38.33 3.99
69 70 4.510571 AGTGGTAGTTTTCTGTCACGTTT 58.489 39.130 0.00 0.00 38.33 3.60
70 71 4.569564 AGTGGTAGTTTTCTGTCACGTTTC 59.430 41.667 0.00 0.00 38.33 2.78
71 72 4.569564 GTGGTAGTTTTCTGTCACGTTTCT 59.430 41.667 0.00 0.00 0.00 2.52
72 73 4.569162 TGGTAGTTTTCTGTCACGTTTCTG 59.431 41.667 0.00 0.00 0.00 3.02
73 74 3.675467 AGTTTTCTGTCACGTTTCTGC 57.325 42.857 0.00 0.00 0.00 4.26
74 75 2.030457 AGTTTTCTGTCACGTTTCTGCG 59.970 45.455 0.00 0.00 37.94 5.18
75 76 1.929230 TTTCTGTCACGTTTCTGCGA 58.071 45.000 0.00 0.00 35.59 5.10
76 77 1.929230 TTCTGTCACGTTTCTGCGAA 58.071 45.000 0.00 0.00 35.59 4.70
77 78 2.148916 TCTGTCACGTTTCTGCGAAT 57.851 45.000 0.00 0.00 35.59 3.34
78 79 2.479837 TCTGTCACGTTTCTGCGAATT 58.520 42.857 0.00 0.00 35.59 2.17
79 80 2.220824 TCTGTCACGTTTCTGCGAATTG 59.779 45.455 0.00 0.00 35.59 2.32
80 81 1.937223 TGTCACGTTTCTGCGAATTGT 59.063 42.857 0.00 0.00 35.59 2.71
81 82 2.286125 TGTCACGTTTCTGCGAATTGTG 60.286 45.455 12.64 12.64 35.59 3.33
82 83 1.262950 TCACGTTTCTGCGAATTGTGG 59.737 47.619 15.87 5.76 35.59 4.17
83 84 1.002900 CACGTTTCTGCGAATTGTGGT 60.003 47.619 0.00 0.00 35.59 4.16
84 85 2.222213 CACGTTTCTGCGAATTGTGGTA 59.778 45.455 0.00 0.00 35.59 3.25
85 86 2.478894 ACGTTTCTGCGAATTGTGGTAG 59.521 45.455 0.00 0.00 35.59 3.18
86 87 2.478894 CGTTTCTGCGAATTGTGGTAGT 59.521 45.455 0.00 0.00 0.00 2.73
87 88 3.059188 CGTTTCTGCGAATTGTGGTAGTT 60.059 43.478 0.00 0.00 0.00 2.24
88 89 4.553938 CGTTTCTGCGAATTGTGGTAGTTT 60.554 41.667 0.00 0.00 0.00 2.66
89 90 5.278604 GTTTCTGCGAATTGTGGTAGTTTT 58.721 37.500 0.00 0.00 0.00 2.43
90 91 5.508200 TTCTGCGAATTGTGGTAGTTTTT 57.492 34.783 0.00 0.00 0.00 1.94
91 92 4.854399 TCTGCGAATTGTGGTAGTTTTTG 58.146 39.130 0.00 0.00 0.00 2.44
92 93 3.971150 TGCGAATTGTGGTAGTTTTTGG 58.029 40.909 0.00 0.00 0.00 3.28
93 94 3.381908 TGCGAATTGTGGTAGTTTTTGGT 59.618 39.130 0.00 0.00 0.00 3.67
94 95 4.142138 TGCGAATTGTGGTAGTTTTTGGTT 60.142 37.500 0.00 0.00 0.00 3.67
95 96 5.067413 TGCGAATTGTGGTAGTTTTTGGTTA 59.933 36.000 0.00 0.00 0.00 2.85
96 97 5.978322 GCGAATTGTGGTAGTTTTTGGTTAA 59.022 36.000 0.00 0.00 0.00 2.01
97 98 6.476053 GCGAATTGTGGTAGTTTTTGGTTAAA 59.524 34.615 0.00 0.00 0.00 1.52
98 99 7.170151 GCGAATTGTGGTAGTTTTTGGTTAAAT 59.830 33.333 0.00 0.00 0.00 1.40
99 100 9.680315 CGAATTGTGGTAGTTTTTGGTTAAATA 57.320 29.630 0.00 0.00 0.00 1.40
103 104 8.168790 TGTGGTAGTTTTTGGTTAAATACTCC 57.831 34.615 0.00 0.00 38.47 3.85
104 105 7.041235 TGTGGTAGTTTTTGGTTAAATACTCCG 60.041 37.037 0.00 0.00 38.47 4.63
105 106 7.173047 GTGGTAGTTTTTGGTTAAATACTCCGA 59.827 37.037 0.00 0.00 38.47 4.55
106 107 7.388500 TGGTAGTTTTTGGTTAAATACTCCGAG 59.612 37.037 0.00 0.00 38.47 4.63
107 108 6.812879 AGTTTTTGGTTAAATACTCCGAGG 57.187 37.500 0.00 0.00 34.37 4.63
108 109 6.301486 AGTTTTTGGTTAAATACTCCGAGGT 58.699 36.000 0.00 0.00 34.37 3.85
109 110 6.206048 AGTTTTTGGTTAAATACTCCGAGGTG 59.794 38.462 0.00 0.00 34.37 4.00
110 111 5.486735 TTTGGTTAAATACTCCGAGGTGA 57.513 39.130 0.00 0.00 0.00 4.02
111 112 4.730949 TGGTTAAATACTCCGAGGTGAG 57.269 45.455 0.00 0.00 38.37 3.51
112 113 3.118884 TGGTTAAATACTCCGAGGTGAGC 60.119 47.826 0.00 0.00 35.72 4.26
113 114 3.455327 GTTAAATACTCCGAGGTGAGCC 58.545 50.000 0.00 0.00 35.72 4.70
114 115 1.568504 AAATACTCCGAGGTGAGCCA 58.431 50.000 0.00 0.00 35.72 4.75
115 116 1.115467 AATACTCCGAGGTGAGCCAG 58.885 55.000 0.00 0.00 35.72 4.85
116 117 0.259065 ATACTCCGAGGTGAGCCAGA 59.741 55.000 0.00 0.00 35.72 3.86
117 118 0.394488 TACTCCGAGGTGAGCCAGAG 60.394 60.000 0.00 0.00 35.72 3.35
118 119 1.379176 CTCCGAGGTGAGCCAGAGA 60.379 63.158 0.00 0.00 37.19 3.10
119 120 1.379176 TCCGAGGTGAGCCAGAGAG 60.379 63.158 0.00 0.00 37.19 3.20
120 121 1.379176 CCGAGGTGAGCCAGAGAGA 60.379 63.158 0.00 0.00 37.19 3.10
121 122 1.383456 CCGAGGTGAGCCAGAGAGAG 61.383 65.000 0.00 0.00 37.19 3.20
122 123 0.393673 CGAGGTGAGCCAGAGAGAGA 60.394 60.000 0.00 0.00 37.19 3.10
123 124 1.392589 GAGGTGAGCCAGAGAGAGAG 58.607 60.000 0.00 0.00 37.19 3.20
124 125 0.998928 AGGTGAGCCAGAGAGAGAGA 59.001 55.000 0.00 0.00 37.19 3.10
125 126 1.064463 AGGTGAGCCAGAGAGAGAGAG 60.064 57.143 0.00 0.00 37.19 3.20
126 127 1.064758 GGTGAGCCAGAGAGAGAGAGA 60.065 57.143 0.00 0.00 34.09 3.10
127 128 2.292267 GTGAGCCAGAGAGAGAGAGAG 58.708 57.143 0.00 0.00 0.00 3.20
128 129 1.915489 TGAGCCAGAGAGAGAGAGAGT 59.085 52.381 0.00 0.00 0.00 3.24
151 152 2.697751 AGCTGCCATGGTTTGTTAACAA 59.302 40.909 17.01 17.01 35.92 2.83
186 189 6.183361 ACAGTTAGCTGGCCATATATTTGGTA 60.183 38.462 5.51 0.00 46.62 3.25
187 190 6.886459 CAGTTAGCTGGCCATATATTTGGTAT 59.114 38.462 5.51 0.00 39.01 2.73
188 191 7.394359 CAGTTAGCTGGCCATATATTTGGTATT 59.606 37.037 5.51 0.00 39.01 1.89
189 192 7.950124 AGTTAGCTGGCCATATATTTGGTATTT 59.050 33.333 5.51 0.00 39.11 1.40
190 193 8.585018 GTTAGCTGGCCATATATTTGGTATTTT 58.415 33.333 5.51 1.41 39.11 1.82
191 194 6.996509 AGCTGGCCATATATTTGGTATTTTG 58.003 36.000 5.51 0.00 39.11 2.44
192 195 6.014327 AGCTGGCCATATATTTGGTATTTTGG 60.014 38.462 5.51 0.00 39.11 3.28
193 196 6.239572 GCTGGCCATATATTTGGTATTTTGGT 60.240 38.462 5.51 0.00 39.11 3.67
199 202 9.311916 CCATATATTTGGTATTTTGGTGTGTTG 57.688 33.333 4.14 0.00 31.74 3.33
204 207 4.184629 TGGTATTTTGGTGTGTTGTTTGC 58.815 39.130 0.00 0.00 0.00 3.68
254 311 2.806244 CGTCCAACTTCGATGTTTTCCT 59.194 45.455 13.53 0.00 0.00 3.36
260 317 6.488683 TCCAACTTCGATGTTTTCCTGTTTAT 59.511 34.615 13.53 0.00 0.00 1.40
264 321 8.029642 ACTTCGATGTTTTCCTGTTTATACTG 57.970 34.615 0.00 0.00 0.00 2.74
276 343 8.570038 TCCTGTTTATACTGATTATAACCCCA 57.430 34.615 0.00 0.00 33.16 4.96
287 358 4.909696 TTATAACCCCACATGCATTTCG 57.090 40.909 0.00 0.00 0.00 3.46
294 365 2.223144 CCCACATGCATTTCGGTATACG 59.777 50.000 0.00 0.00 46.11 3.06
304 375 6.970613 TGCATTTCGGTATACGCTATGTATAG 59.029 38.462 0.00 0.00 44.63 1.31
318 389 3.769739 TGTATAGCGAGGGAATGCAAT 57.230 42.857 0.00 0.00 0.00 3.56
392 499 1.370437 CCATGCATCTCCTCCTCGG 59.630 63.158 0.00 0.00 0.00 4.63
393 500 1.301558 CATGCATCTCCTCCTCGGC 60.302 63.158 0.00 0.00 0.00 5.54
394 501 2.865598 ATGCATCTCCTCCTCGGCG 61.866 63.158 0.00 0.00 0.00 6.46
428 539 2.231964 CAGGATGTGTTTGGTCCCAATG 59.768 50.000 0.00 0.00 35.70 2.82
435 546 1.412343 GTTTGGTCCCAATGTTGCACT 59.588 47.619 0.00 0.00 35.70 4.40
437 548 0.827089 TGGTCCCAATGTTGCACTGG 60.827 55.000 0.00 0.00 0.00 4.00
465 580 9.985730 AAATGCATGATAACCATAATTACTTGG 57.014 29.630 0.00 3.92 39.02 3.61
466 581 6.980593 TGCATGATAACCATAATTACTTGGC 58.019 36.000 0.00 0.00 36.41 4.52
544 664 3.703001 ACCACCATTATCGATCCATCC 57.297 47.619 0.00 0.00 0.00 3.51
555 675 1.348696 CGATCCATCCATCCATCACCA 59.651 52.381 0.00 0.00 0.00 4.17
577 697 0.039618 GGGTTGAAGGATGGGAGCAA 59.960 55.000 0.00 0.00 0.00 3.91
603 726 4.035558 CCTTTACATCGTTACATGCATGCT 59.964 41.667 26.53 15.56 0.00 3.79
604 727 4.794248 TTACATCGTTACATGCATGCTC 57.206 40.909 26.53 15.07 0.00 4.26
608 731 0.659427 CGTTACATGCATGCTCCCTG 59.341 55.000 26.53 13.03 0.00 4.45
612 735 2.194212 CATGCATGCTCCCTGCCTC 61.194 63.158 20.33 0.00 42.00 4.70
618 747 4.925861 GCTCCCTGCCTCCGCATC 62.926 72.222 0.00 0.00 46.11 3.91
754 899 0.035458 CTTTCGGTCTTGGCTGGAGT 59.965 55.000 0.00 0.00 0.00 3.85
1063 1475 2.486663 CGATCGACCCGACCATCCA 61.487 63.158 10.26 0.00 39.18 3.41
1108 1520 3.129638 CGAGGAGTAGCTAGCTCAAGTTT 59.870 47.826 23.26 3.78 34.83 2.66
1119 1531 1.391826 GCTCAAGTTTCACGCTAGCTC 59.608 52.381 13.93 0.00 0.00 4.09
1120 1532 2.677199 CTCAAGTTTCACGCTAGCTCA 58.323 47.619 13.93 0.00 0.00 4.26
1218 1643 1.442148 CGGGCCAGCTAGGTAAGAC 59.558 63.158 4.39 0.00 40.61 3.01
1223 1648 2.418884 GGCCAGCTAGGTAAGACAGTTC 60.419 54.545 0.00 0.00 40.61 3.01
1239 1664 4.603131 ACAGTTCACCAGCATCCATTTAT 58.397 39.130 0.00 0.00 0.00 1.40
1240 1665 5.018809 ACAGTTCACCAGCATCCATTTATT 58.981 37.500 0.00 0.00 0.00 1.40
1241 1666 5.481473 ACAGTTCACCAGCATCCATTTATTT 59.519 36.000 0.00 0.00 0.00 1.40
1242 1667 6.038356 CAGTTCACCAGCATCCATTTATTTC 58.962 40.000 0.00 0.00 0.00 2.17
1276 1701 1.691215 CTTCTCTTCTGCTTCGCCGC 61.691 60.000 0.00 0.00 0.00 6.53
1318 1746 3.151554 TGTGCATGCTGAAGTTTCTGAT 58.848 40.909 20.33 0.00 0.00 2.90
1358 1786 2.677979 GGGGTTCGCTTGCTTCGAC 61.678 63.158 0.00 0.00 35.51 4.20
1362 1790 2.938823 TTCGCTTGCTTCGACGTGC 61.939 57.895 0.00 8.24 35.51 5.34
1391 1819 0.324460 GAGAAGACGAGGAGGGGGAA 60.324 60.000 0.00 0.00 0.00 3.97
1425 1858 1.228675 CCTGCCCTGGAGCAAAAGT 60.229 57.895 10.39 0.00 43.52 2.66
1434 1867 1.156736 GGAGCAAAAGTAGCGCTTGA 58.843 50.000 18.68 0.00 37.52 3.02
1437 1870 1.532868 AGCAAAAGTAGCGCTTGACTG 59.467 47.619 18.68 8.55 37.52 3.51
1438 1871 1.531149 GCAAAAGTAGCGCTTGACTGA 59.469 47.619 18.68 0.00 37.52 3.41
1439 1872 2.663063 GCAAAAGTAGCGCTTGACTGAC 60.663 50.000 18.68 6.40 37.52 3.51
1440 1873 2.802816 CAAAAGTAGCGCTTGACTGACT 59.197 45.455 18.68 9.21 37.52 3.41
1484 1917 2.261671 CGTAGGCGTGGTGAAGCT 59.738 61.111 0.00 0.00 0.00 3.74
1485 1918 1.509463 CGTAGGCGTGGTGAAGCTA 59.491 57.895 0.00 0.00 0.00 3.32
1486 1919 0.525668 CGTAGGCGTGGTGAAGCTAG 60.526 60.000 0.00 0.00 0.00 3.42
1487 1920 0.806492 GTAGGCGTGGTGAAGCTAGC 60.806 60.000 6.62 6.62 0.00 3.42
1488 1921 1.254975 TAGGCGTGGTGAAGCTAGCA 61.255 55.000 18.83 0.00 0.00 3.49
1489 1922 2.391389 GGCGTGGTGAAGCTAGCAC 61.391 63.158 18.83 11.11 43.61 4.40
1490 1923 1.374758 GCGTGGTGAAGCTAGCACT 60.375 57.895 18.83 2.77 44.56 4.40
1491 1924 1.630244 GCGTGGTGAAGCTAGCACTG 61.630 60.000 18.83 10.32 44.56 3.66
1492 1925 1.016130 CGTGGTGAAGCTAGCACTGG 61.016 60.000 18.83 0.00 44.56 4.00
1493 1926 0.035458 GTGGTGAAGCTAGCACTGGT 59.965 55.000 18.83 0.00 43.67 4.00
1494 1927 1.275291 GTGGTGAAGCTAGCACTGGTA 59.725 52.381 18.83 0.00 43.67 3.25
1495 1928 1.275291 TGGTGAAGCTAGCACTGGTAC 59.725 52.381 18.83 6.74 36.53 3.34
1619 2058 9.434420 AATACTAGTATATAGGTCAGTCGTGTC 57.566 37.037 15.74 0.00 0.00 3.67
1620 2059 6.824553 ACTAGTATATAGGTCAGTCGTGTCA 58.175 40.000 0.00 0.00 0.00 3.58
1621 2060 6.705381 ACTAGTATATAGGTCAGTCGTGTCAC 59.295 42.308 0.00 0.00 0.00 3.67
1622 2061 5.682659 AGTATATAGGTCAGTCGTGTCACT 58.317 41.667 0.65 0.00 0.00 3.41
1626 2065 1.067212 AGGTCAGTCGTGTCACTTGTC 59.933 52.381 0.65 0.00 0.00 3.18
1653 2271 2.834549 GTTCTCTCCTCCTCATCCACAA 59.165 50.000 0.00 0.00 0.00 3.33
1654 2272 3.190383 TCTCTCCTCCTCATCCACAAA 57.810 47.619 0.00 0.00 0.00 2.83
1664 2282 6.349944 CCTCCTCATCCACAAAGAGAAATTTG 60.350 42.308 0.00 0.00 44.14 2.32
1734 2352 1.082104 GCTTCGTCCGCACAAAAGG 60.082 57.895 0.00 0.00 0.00 3.11
1739 2357 1.743958 TCGTCCGCACAAAAGGAAAAA 59.256 42.857 0.00 0.00 38.41 1.94
1789 2407 0.180406 ATGGTCCGGCAATCCTACAC 59.820 55.000 0.00 0.00 0.00 2.90
1863 2481 9.621629 TTTTTATGTCTGTCTTTTAGTTCCAGA 57.378 29.630 0.00 0.00 0.00 3.86
1951 2570 5.695851 ACAGAGCAAAAGTTACCTTCATG 57.304 39.130 0.00 0.00 0.00 3.07
1968 2587 5.652014 CCTTCATGTTTTTACTAGATGGCCA 59.348 40.000 8.56 8.56 0.00 5.36
1986 2605 4.202080 TGGCCAGACGATGTATAGTTGTAC 60.202 45.833 0.00 0.00 0.00 2.90
2042 2663 8.277197 ACTATTGGAATAACCTAGGTTTAACCC 58.723 37.037 31.47 24.28 38.15 4.11
2056 2677 2.889170 TAACCCCACATAGCAAAGCA 57.111 45.000 0.00 0.00 0.00 3.91
2066 2687 1.921982 TAGCAAAGCAAGGCAATCCA 58.078 45.000 0.00 0.00 33.74 3.41
2102 2723 7.031372 CCATGAAAATTGTCCTAGAACATGTG 58.969 38.462 0.00 0.00 33.29 3.21
2162 2784 7.434307 CCTAGAATTAAGCAAGCATTTGATGTG 59.566 37.037 0.00 0.00 36.36 3.21
2174 2796 4.931002 GCATTTGATGTGCTTGTACCAATT 59.069 37.500 0.00 0.00 39.45 2.32
2234 2856 4.254492 CCTCTAGCTTCACCACCTTTTAC 58.746 47.826 0.00 0.00 0.00 2.01
2264 2886 4.155462 GTCCACAGAGTTACGATGAGTACA 59.845 45.833 0.00 0.00 34.56 2.90
2318 2940 4.289238 TGCCATGAAAATTGCCAAAGAT 57.711 36.364 0.00 0.00 0.00 2.40
2340 2963 7.909518 AGATGATGAGAAAGAGAATATCAGGG 58.090 38.462 0.00 0.00 0.00 4.45
2359 2982 7.894753 TCAGGGAACATGCAATTTGATAATA 57.105 32.000 0.00 0.00 0.00 0.98
2432 3059 9.341899 CAACCTAGTTTGCATAGAATTAAACAC 57.658 33.333 0.00 0.00 35.93 3.32
2486 3115 2.485814 CACTTTCTTAGCAAGGCCTCAC 59.514 50.000 5.23 0.00 0.00 3.51
2554 3183 8.116753 GTCGACTTTGAATGTGAATATACCTTG 58.883 37.037 8.70 0.00 0.00 3.61
2556 3185 8.116753 CGACTTTGAATGTGAATATACCTTGAC 58.883 37.037 0.00 0.00 0.00 3.18
2561 3190 8.554835 TGAATGTGAATATACCTTGACGAAAA 57.445 30.769 0.00 0.00 0.00 2.29
2706 3338 9.503427 CCGATTATTTTCATTTAGAAACACCTC 57.497 33.333 0.00 0.00 45.48 3.85
2722 3354 3.369756 ACACCTCATACAACATAAACGCG 59.630 43.478 3.53 3.53 0.00 6.01
2735 3367 2.405061 AAACGCGCACACACATGCAT 62.405 50.000 5.73 0.00 46.47 3.96
2738 3370 1.796151 GCGCACACACATGCATACT 59.204 52.632 0.30 0.00 46.47 2.12
2755 3387 5.071370 GCATACTAGTAAGCCTCTAGTCCA 58.929 45.833 17.37 2.44 44.39 4.02
2756 3388 5.048573 GCATACTAGTAAGCCTCTAGTCCAC 60.049 48.000 17.37 4.61 44.39 4.02
2757 3389 4.587976 ACTAGTAAGCCTCTAGTCCACA 57.412 45.455 0.00 0.00 42.74 4.17
2758 3390 4.271661 ACTAGTAAGCCTCTAGTCCACAC 58.728 47.826 0.00 0.00 42.74 3.82
2759 3391 2.093106 AGTAAGCCTCTAGTCCACACG 58.907 52.381 0.00 0.00 0.00 4.49
2760 3392 0.815734 TAAGCCTCTAGTCCACACGC 59.184 55.000 0.00 0.00 0.00 5.34
2761 3393 1.185618 AAGCCTCTAGTCCACACGCA 61.186 55.000 0.00 0.00 0.00 5.24
2774 3409 2.159667 CCACACGCACACACAATATCTG 60.160 50.000 0.00 0.00 0.00 2.90
2799 3434 0.826062 GATTGAAACCATGGGGCCTG 59.174 55.000 18.09 0.00 37.90 4.85
2817 3452 3.001634 GCCTGATGATCAACACATGTACG 59.998 47.826 0.00 0.00 0.00 3.67
2828 3463 6.394809 TCAACACATGTACGTCACTATTGAT 58.605 36.000 0.00 0.00 33.11 2.57
2908 3543 4.103311 AGCATCAAACCTAGGAGTAATCCC 59.897 45.833 17.98 0.00 0.00 3.85
2912 3551 4.715297 TCAAACCTAGGAGTAATCCCTCAC 59.285 45.833 17.98 0.00 35.30 3.51
2915 3554 2.424523 CCTAGGAGTAATCCCTCACGGT 60.425 54.545 1.05 0.00 35.30 4.83
2931 3570 1.345415 ACGGTCGTTGGGTTACAATCT 59.655 47.619 0.00 0.00 41.95 2.40
2997 3636 9.996554 TGAAGTGATTAGAAATGTGACTTAGAA 57.003 29.630 0.00 0.00 0.00 2.10
3071 3736 7.607607 TGCATATTATAGTCCCAATAGCAACAG 59.392 37.037 0.00 0.00 0.00 3.16
3082 3747 5.163258 CCCAATAGCAACAGATTCTACTCCT 60.163 44.000 0.00 0.00 0.00 3.69
3087 3752 1.853963 ACAGATTCTACTCCTGCCGT 58.146 50.000 0.00 0.00 0.00 5.68
3135 3800 6.308766 CCCATTTTTCAGATAGCAAGAAAACG 59.691 38.462 9.84 5.91 39.96 3.60
3221 3899 1.896220 TGCATGTGGTGTCTCTTTCC 58.104 50.000 0.00 0.00 0.00 3.13
3315 3993 2.865079 TCGGGAAGAGATAGCTAGTGG 58.135 52.381 0.00 0.00 0.00 4.00
3317 3995 1.621317 GGGAAGAGATAGCTAGTGGGC 59.379 57.143 0.00 0.00 0.00 5.36
3318 3996 2.604139 GGAAGAGATAGCTAGTGGGCT 58.396 52.381 0.00 0.00 45.29 5.19
3319 3997 2.560981 GGAAGAGATAGCTAGTGGGCTC 59.439 54.545 0.00 1.40 42.97 4.70
3320 3998 1.904287 AGAGATAGCTAGTGGGCTCG 58.096 55.000 0.00 0.00 42.97 5.03
3322 4000 2.372504 AGAGATAGCTAGTGGGCTCGTA 59.627 50.000 0.00 0.00 42.97 3.43
3323 4001 3.009695 AGAGATAGCTAGTGGGCTCGTAT 59.990 47.826 0.00 0.00 42.97 3.06
3324 4002 4.225492 AGAGATAGCTAGTGGGCTCGTATA 59.775 45.833 0.00 0.00 42.97 1.47
3325 4003 4.919793 AGATAGCTAGTGGGCTCGTATAA 58.080 43.478 0.00 0.00 42.97 0.98
3326 4004 5.322754 AGATAGCTAGTGGGCTCGTATAAA 58.677 41.667 0.00 0.00 42.97 1.40
3360 4038 7.149202 TGCCTTGTATTAATAACAGAGGGAT 57.851 36.000 0.00 0.00 31.42 3.85
3376 4055 6.437477 ACAGAGGGATTATAAGATGTCGCATA 59.563 38.462 4.34 0.00 0.00 3.14
3450 4131 8.299570 AGAATGTTTTTGTTTATCAGGCAGTAG 58.700 33.333 0.00 0.00 0.00 2.57
3451 4132 6.952773 TGTTTTTGTTTATCAGGCAGTAGT 57.047 33.333 0.00 0.00 0.00 2.73
3480 4161 7.171678 GTCAACTGTCAACTAACTTGCTTCTAT 59.828 37.037 0.00 0.00 0.00 1.98
3481 4162 7.171508 TCAACTGTCAACTAACTTGCTTCTATG 59.828 37.037 0.00 0.00 0.00 2.23
3482 4163 5.409826 ACTGTCAACTAACTTGCTTCTATGC 59.590 40.000 0.00 0.00 0.00 3.14
3514 4199 6.058553 TGATCAGTGGAAGAAGATGAATGT 57.941 37.500 0.00 0.00 0.00 2.71
3518 4203 7.587037 TCAGTGGAAGAAGATGAATGTTTTT 57.413 32.000 0.00 0.00 0.00 1.94
3557 4242 1.599797 CCGTTTCCACCCCACTGAC 60.600 63.158 0.00 0.00 0.00 3.51
3614 4299 3.817084 TGCAACTGAAGAGGATTGACTTG 59.183 43.478 0.00 0.00 0.00 3.16
3650 4335 8.560576 AAGACGTTGATTTGTACAAAATTGAG 57.439 30.769 23.97 16.93 33.56 3.02
3716 4478 7.229707 TGTTGTGTACAATATAGCCAAACAAGT 59.770 33.333 0.00 0.00 38.24 3.16
3731 4493 1.463444 ACAAGTTTTCCTATGCGCGTC 59.537 47.619 4.79 0.00 0.00 5.19
3754 4520 5.127194 TCACCTTGCAATACACTACTCTAGG 59.873 44.000 0.00 0.00 0.00 3.02
3755 4521 5.024118 ACCTTGCAATACACTACTCTAGGT 58.976 41.667 0.00 0.00 0.00 3.08
3756 4522 5.127356 ACCTTGCAATACACTACTCTAGGTC 59.873 44.000 0.00 0.00 0.00 3.85
3757 4523 5.361285 CCTTGCAATACACTACTCTAGGTCT 59.639 44.000 0.00 0.00 0.00 3.85
3758 4524 6.452494 TTGCAATACACTACTCTAGGTCTC 57.548 41.667 0.00 0.00 0.00 3.36
3759 4525 5.756918 TGCAATACACTACTCTAGGTCTCT 58.243 41.667 0.00 0.00 0.00 3.10
3760 4526 6.896883 TGCAATACACTACTCTAGGTCTCTA 58.103 40.000 0.00 0.00 0.00 2.43
3761 4527 6.993308 TGCAATACACTACTCTAGGTCTCTAG 59.007 42.308 0.00 0.00 43.27 2.43
3769 4535 6.714810 ACTACTCTAGGTCTCTAGCATGATTG 59.285 42.308 0.00 0.00 42.01 2.67
3776 4542 4.194640 GTCTCTAGCATGATTGGCAGAAA 58.805 43.478 0.00 0.00 0.00 2.52
3785 4551 3.899734 TGATTGGCAGAAAAATGACGTG 58.100 40.909 0.00 0.00 0.00 4.49
3791 4557 2.653890 CAGAAAAATGACGTGCCAGTG 58.346 47.619 0.00 0.00 0.00 3.66
3847 4613 4.336433 CCATACCTCAAACGATGCTCAAAT 59.664 41.667 0.00 0.00 0.00 2.32
3863 4629 5.355071 TGCTCAAATAGAACGATGCAAGATT 59.645 36.000 0.00 0.00 0.00 2.40
3920 4686 3.559171 GCCACAAGGACAAGAAGTATCCA 60.559 47.826 0.00 0.00 36.89 3.41
3938 4704 1.019278 CAACCGGCACTCGCACTAAT 61.019 55.000 0.00 0.00 41.24 1.73
4065 4831 2.421399 GCTCCCAATGGGCAGAAGC 61.421 63.158 14.88 13.82 43.94 3.86
4171 4938 7.439356 TCTCAAATGTGCATGCTAGTAGTAATC 59.561 37.037 20.33 0.00 0.00 1.75
4188 4955 8.754080 AGTAGTAATCATTAGCATCATACTCCC 58.246 37.037 0.00 0.00 0.00 4.30
4189 4956 7.805083 AGTAATCATTAGCATCATACTCCCT 57.195 36.000 0.00 0.00 0.00 4.20
4190 4957 7.846066 AGTAATCATTAGCATCATACTCCCTC 58.154 38.462 0.00 0.00 0.00 4.30
4191 4958 5.690464 ATCATTAGCATCATACTCCCTCC 57.310 43.478 0.00 0.00 0.00 4.30
4192 4959 4.492646 TCATTAGCATCATACTCCCTCCA 58.507 43.478 0.00 0.00 0.00 3.86
4193 4960 5.096521 TCATTAGCATCATACTCCCTCCAT 58.903 41.667 0.00 0.00 0.00 3.41
4194 4961 5.188555 TCATTAGCATCATACTCCCTCCATC 59.811 44.000 0.00 0.00 0.00 3.51
4195 4962 2.264455 AGCATCATACTCCCTCCATCC 58.736 52.381 0.00 0.00 0.00 3.51
4196 4963 1.066573 GCATCATACTCCCTCCATCCG 60.067 57.143 0.00 0.00 0.00 4.18
4197 4964 1.552337 CATCATACTCCCTCCATCCGG 59.448 57.143 0.00 0.00 0.00 5.14
4198 4965 0.857675 TCATACTCCCTCCATCCGGA 59.142 55.000 6.61 6.61 39.79 5.14
4199 4966 1.219469 TCATACTCCCTCCATCCGGAA 59.781 52.381 9.01 0.00 42.21 4.30
4200 4967 2.047061 CATACTCCCTCCATCCGGAAA 58.953 52.381 9.01 0.00 42.21 3.13
4201 4968 2.489528 TACTCCCTCCATCCGGAAAT 57.510 50.000 9.01 0.00 42.21 2.17
4202 4969 2.489528 ACTCCCTCCATCCGGAAATA 57.510 50.000 9.01 0.00 42.21 1.40
4203 4970 2.047830 ACTCCCTCCATCCGGAAATAC 58.952 52.381 9.01 0.00 42.21 1.89
4204 4971 2.330216 CTCCCTCCATCCGGAAATACT 58.670 52.381 9.01 0.00 42.21 2.12
4205 4972 2.706190 CTCCCTCCATCCGGAAATACTT 59.294 50.000 9.01 0.00 42.21 2.24
4206 4973 2.438021 TCCCTCCATCCGGAAATACTTG 59.562 50.000 9.01 0.00 42.21 3.16
4207 4974 2.172717 CCCTCCATCCGGAAATACTTGT 59.827 50.000 9.01 0.00 42.21 3.16
4208 4975 3.467803 CCTCCATCCGGAAATACTTGTC 58.532 50.000 9.01 0.00 42.21 3.18
4209 4976 3.118408 CCTCCATCCGGAAATACTTGTCA 60.118 47.826 9.01 0.00 42.21 3.58
4210 4977 4.444876 CCTCCATCCGGAAATACTTGTCAT 60.445 45.833 9.01 0.00 42.21 3.06
4211 4978 4.703897 TCCATCCGGAAATACTTGTCATC 58.296 43.478 9.01 0.00 38.83 2.92
4212 4979 4.163268 TCCATCCGGAAATACTTGTCATCA 59.837 41.667 9.01 0.00 38.83 3.07
4213 4980 4.881273 CCATCCGGAAATACTTGTCATCAA 59.119 41.667 9.01 0.00 0.00 2.57
4214 4981 5.356751 CCATCCGGAAATACTTGTCATCAAA 59.643 40.000 9.01 0.00 32.87 2.69
4215 4982 6.127758 CCATCCGGAAATACTTGTCATCAAAA 60.128 38.462 9.01 0.00 32.87 2.44
4216 4983 7.416664 CCATCCGGAAATACTTGTCATCAAAAT 60.417 37.037 9.01 0.00 32.87 1.82
4217 4984 8.620416 CATCCGGAAATACTTGTCATCAAAATA 58.380 33.333 9.01 0.00 32.87 1.40
4218 4985 8.568676 TCCGGAAATACTTGTCATCAAAATAA 57.431 30.769 0.00 0.00 32.87 1.40
4219 4986 9.015367 TCCGGAAATACTTGTCATCAAAATAAA 57.985 29.630 0.00 0.00 32.87 1.40
4220 4987 9.801873 CCGGAAATACTTGTCATCAAAATAAAT 57.198 29.630 0.00 0.00 32.87 1.40
4288 5055 9.918630 CTCTTTTTATCCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
4296 5063 9.865321 ATCCATTTTGATGACAAGTATTTTCAG 57.135 29.630 0.00 0.00 37.32 3.02
4297 5064 9.076781 TCCATTTTGATGACAAGTATTTTCAGA 57.923 29.630 0.00 0.00 37.32 3.27
4298 5065 9.132521 CCATTTTGATGACAAGTATTTTCAGAC 57.867 33.333 0.00 0.00 37.32 3.51
4299 5066 8.843733 CATTTTGATGACAAGTATTTTCAGACG 58.156 33.333 0.00 0.00 37.32 4.18
4300 5067 6.480524 TTGATGACAAGTATTTTCAGACGG 57.519 37.500 0.00 0.00 0.00 4.79
4301 5068 5.789521 TGATGACAAGTATTTTCAGACGGA 58.210 37.500 0.00 0.00 0.00 4.69
4302 5069 5.869344 TGATGACAAGTATTTTCAGACGGAG 59.131 40.000 0.00 0.00 0.00 4.63
4303 5070 4.566004 TGACAAGTATTTTCAGACGGAGG 58.434 43.478 0.00 0.00 0.00 4.30
4304 5071 4.282449 TGACAAGTATTTTCAGACGGAGGA 59.718 41.667 0.00 0.00 0.00 3.71
4305 5072 5.221561 TGACAAGTATTTTCAGACGGAGGAA 60.222 40.000 0.00 0.00 0.00 3.36
4319 5086 2.670509 CGGAGGAAGTACCGTTCTTCAC 60.671 54.545 16.86 11.03 43.53 3.18
4445 5212 2.045926 GCAGAGAATGGCCACCGT 60.046 61.111 8.16 0.00 0.00 4.83
4575 5342 0.178873 ACCACCAGACCTACCACCAT 60.179 55.000 0.00 0.00 0.00 3.55
4985 5752 3.620929 ACGTACGGCATATACAGACAG 57.379 47.619 21.06 0.00 0.00 3.51
5030 5798 5.006153 ACGCACATCACTGTATAAAGCTA 57.994 39.130 0.00 0.00 33.14 3.32
5031 5799 5.601662 ACGCACATCACTGTATAAAGCTAT 58.398 37.500 0.00 0.00 33.14 2.97
5143 5915 4.630111 CCAAATTGGTTGTACTTGCATGT 58.370 39.130 10.40 10.40 35.23 3.21
5165 5937 6.071984 TGTACAATTTGGAGGGTGTAATGTT 58.928 36.000 0.00 0.00 0.00 2.71
5166 5938 5.722021 ACAATTTGGAGGGTGTAATGTTC 57.278 39.130 0.78 0.00 0.00 3.18
5167 5939 5.144100 ACAATTTGGAGGGTGTAATGTTCA 58.856 37.500 0.78 0.00 0.00 3.18
5168 5940 5.779771 ACAATTTGGAGGGTGTAATGTTCAT 59.220 36.000 0.78 0.00 0.00 2.57
5170 5942 7.453126 ACAATTTGGAGGGTGTAATGTTCATAA 59.547 33.333 0.78 0.00 0.00 1.90
5171 5943 6.827586 TTTGGAGGGTGTAATGTTCATAAC 57.172 37.500 0.00 0.00 0.00 1.89
5274 6046 1.667724 GCCATGCACAGCTAGTAGTTG 59.332 52.381 12.05 12.05 32.33 3.16
5278 6050 4.494484 CATGCACAGCTAGTAGTTGTACA 58.506 43.478 18.85 18.85 37.57 2.90
5289 6061 7.387948 AGCTAGTAGTTGTACACTTTCCAATTG 59.612 37.037 0.00 0.00 36.88 2.32
5297 6069 8.564574 GTTGTACACTTTCCAATTGAAGTGATA 58.435 33.333 31.35 21.39 36.47 2.15
5321 6093 5.455056 AGTAGTATATGAAAGCACTCCCG 57.545 43.478 0.00 0.00 0.00 5.14
5322 6094 5.138276 AGTAGTATATGAAAGCACTCCCGA 58.862 41.667 0.00 0.00 0.00 5.14
5323 6095 4.592485 AGTATATGAAAGCACTCCCGAG 57.408 45.455 0.00 0.00 0.00 4.63
5324 6096 2.918712 ATATGAAAGCACTCCCGAGG 57.081 50.000 0.00 0.00 0.00 4.63
5325 6097 0.178068 TATGAAAGCACTCCCGAGGC 59.822 55.000 0.00 0.00 0.00 4.70
5326 6098 1.557269 ATGAAAGCACTCCCGAGGCT 61.557 55.000 0.00 0.00 36.82 4.58
5327 6099 1.003233 GAAAGCACTCCCGAGGCTT 60.003 57.895 12.07 12.07 42.53 4.35
5432 6207 4.344865 CACCACCCAACTCCCCGG 62.345 72.222 0.00 0.00 0.00 5.73
5462 6237 4.148825 GGACCTCACGCTCGCCAT 62.149 66.667 0.00 0.00 0.00 4.40
5519 6294 2.897350 GCCCTCGCCATTCTTCGG 60.897 66.667 0.00 0.00 0.00 4.30
5568 6343 2.735772 GCTCCGATGCTTCCTGGGA 61.736 63.158 0.00 0.00 0.00 4.37
5592 6367 1.865788 GCAACGCCATGAGCTTGGAA 61.866 55.000 8.71 0.00 39.25 3.53
5781 6557 0.610174 TCGCACAATGCTCTCCTCTT 59.390 50.000 0.00 0.00 42.25 2.85
5880 6656 7.978975 CACTACTCCTTCTCTTTCATTAGGAAG 59.021 40.741 0.00 0.00 36.72 3.46
5892 6668 2.263895 TTAGGAAGCTGCCCTCCTTA 57.736 50.000 21.84 12.94 35.30 2.69
6010 6786 1.298859 GCAGCTACGTTCCCAGGTTG 61.299 60.000 0.00 0.00 0.00 3.77
6011 6787 0.034896 CAGCTACGTTCCCAGGTTGT 59.965 55.000 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 7.628769 TTTGTCCCGAAAACTACTACTTTTT 57.371 32.000 0.00 0.00 0.00 1.94
16 17 7.628769 TTTTGTCCCGAAAACTACTACTTTT 57.371 32.000 0.00 0.00 0.00 2.27
17 18 7.499895 TGATTTTGTCCCGAAAACTACTACTTT 59.500 33.333 0.00 0.00 0.00 2.66
18 19 6.993902 TGATTTTGTCCCGAAAACTACTACTT 59.006 34.615 0.00 0.00 0.00 2.24
19 20 6.527423 TGATTTTGTCCCGAAAACTACTACT 58.473 36.000 0.00 0.00 0.00 2.57
20 21 6.790285 TGATTTTGTCCCGAAAACTACTAC 57.210 37.500 0.00 0.00 0.00 2.73
21 22 9.504708 TTTATGATTTTGTCCCGAAAACTACTA 57.495 29.630 0.00 0.00 0.00 1.82
22 23 7.989416 TTATGATTTTGTCCCGAAAACTACT 57.011 32.000 0.00 0.00 0.00 2.57
23 24 8.294577 ACTTTATGATTTTGTCCCGAAAACTAC 58.705 33.333 0.00 0.00 0.00 2.73
24 25 8.293867 CACTTTATGATTTTGTCCCGAAAACTA 58.706 33.333 0.00 0.00 0.00 2.24
25 26 7.145323 CACTTTATGATTTTGTCCCGAAAACT 58.855 34.615 0.00 0.00 0.00 2.66
26 27 6.364976 CCACTTTATGATTTTGTCCCGAAAAC 59.635 38.462 0.00 0.00 0.00 2.43
27 28 6.041069 ACCACTTTATGATTTTGTCCCGAAAA 59.959 34.615 0.00 0.00 0.00 2.29
28 29 5.536916 ACCACTTTATGATTTTGTCCCGAAA 59.463 36.000 0.00 0.00 0.00 3.46
29 30 5.074115 ACCACTTTATGATTTTGTCCCGAA 58.926 37.500 0.00 0.00 0.00 4.30
30 31 4.658063 ACCACTTTATGATTTTGTCCCGA 58.342 39.130 0.00 0.00 0.00 5.14
31 32 5.646360 ACTACCACTTTATGATTTTGTCCCG 59.354 40.000 0.00 0.00 0.00 5.14
32 33 7.462571 AACTACCACTTTATGATTTTGTCCC 57.537 36.000 0.00 0.00 0.00 4.46
33 34 9.406828 GAAAACTACCACTTTATGATTTTGTCC 57.593 33.333 0.00 0.00 0.00 4.02
35 36 9.965824 CAGAAAACTACCACTTTATGATTTTGT 57.034 29.630 0.00 0.00 0.00 2.83
36 37 9.965824 ACAGAAAACTACCACTTTATGATTTTG 57.034 29.630 0.00 0.00 30.28 2.44
38 39 9.349713 TGACAGAAAACTACCACTTTATGATTT 57.650 29.630 0.00 0.00 30.28 2.17
39 40 8.784043 GTGACAGAAAACTACCACTTTATGATT 58.216 33.333 0.00 0.00 30.28 2.57
40 41 7.117812 CGTGACAGAAAACTACCACTTTATGAT 59.882 37.037 0.00 0.00 30.28 2.45
41 42 6.422701 CGTGACAGAAAACTACCACTTTATGA 59.577 38.462 0.00 0.00 30.28 2.15
42 43 6.202188 ACGTGACAGAAAACTACCACTTTATG 59.798 38.462 0.00 0.00 31.61 1.90
43 44 6.285990 ACGTGACAGAAAACTACCACTTTAT 58.714 36.000 0.00 0.00 0.00 1.40
44 45 5.663456 ACGTGACAGAAAACTACCACTTTA 58.337 37.500 0.00 0.00 0.00 1.85
45 46 4.510571 ACGTGACAGAAAACTACCACTTT 58.489 39.130 0.00 0.00 0.00 2.66
46 47 4.133013 ACGTGACAGAAAACTACCACTT 57.867 40.909 0.00 0.00 0.00 3.16
47 48 3.814005 ACGTGACAGAAAACTACCACT 57.186 42.857 0.00 0.00 0.00 4.00
48 49 4.569564 AGAAACGTGACAGAAAACTACCAC 59.430 41.667 0.00 0.00 0.00 4.16
49 50 4.569162 CAGAAACGTGACAGAAAACTACCA 59.431 41.667 0.00 0.00 0.00 3.25
50 51 4.552184 GCAGAAACGTGACAGAAAACTACC 60.552 45.833 0.00 0.00 0.00 3.18
51 52 4.515432 GCAGAAACGTGACAGAAAACTAC 58.485 43.478 0.00 0.00 0.00 2.73
52 53 3.244345 CGCAGAAACGTGACAGAAAACTA 59.756 43.478 0.00 0.00 0.00 2.24
53 54 2.030457 CGCAGAAACGTGACAGAAAACT 59.970 45.455 0.00 0.00 0.00 2.66
54 55 2.029970 TCGCAGAAACGTGACAGAAAAC 59.970 45.455 0.00 0.00 0.00 2.43
55 56 2.272678 TCGCAGAAACGTGACAGAAAA 58.727 42.857 0.00 0.00 0.00 2.29
56 57 1.929230 TCGCAGAAACGTGACAGAAA 58.071 45.000 0.00 0.00 0.00 2.52
57 58 1.929230 TTCGCAGAAACGTGACAGAA 58.071 45.000 0.00 0.00 45.90 3.02
58 59 2.148916 ATTCGCAGAAACGTGACAGA 57.851 45.000 0.00 0.00 45.90 3.41
59 60 2.032894 ACAATTCGCAGAAACGTGACAG 60.033 45.455 0.00 0.00 45.90 3.51
60 61 1.937223 ACAATTCGCAGAAACGTGACA 59.063 42.857 0.00 0.00 45.90 3.58
61 62 2.298300 CACAATTCGCAGAAACGTGAC 58.702 47.619 13.22 0.00 45.90 3.67
62 63 1.262950 CCACAATTCGCAGAAACGTGA 59.737 47.619 17.01 0.00 45.90 4.35
63 64 1.002900 ACCACAATTCGCAGAAACGTG 60.003 47.619 0.00 12.29 45.90 4.49
64 65 1.305201 ACCACAATTCGCAGAAACGT 58.695 45.000 0.00 0.00 45.90 3.99
65 66 2.478894 ACTACCACAATTCGCAGAAACG 59.521 45.455 0.00 0.00 45.90 3.60
66 67 4.483476 AACTACCACAATTCGCAGAAAC 57.517 40.909 0.00 0.00 45.90 2.78
67 68 5.508200 AAAACTACCACAATTCGCAGAAA 57.492 34.783 0.00 0.00 45.90 2.52
68 69 5.277825 CAAAAACTACCACAATTCGCAGAA 58.722 37.500 0.00 0.00 45.90 3.02
69 70 4.261405 CCAAAAACTACCACAATTCGCAGA 60.261 41.667 0.00 0.00 0.00 4.26
70 71 3.980775 CCAAAAACTACCACAATTCGCAG 59.019 43.478 0.00 0.00 0.00 5.18
71 72 3.381908 ACCAAAAACTACCACAATTCGCA 59.618 39.130 0.00 0.00 0.00 5.10
72 73 3.972403 ACCAAAAACTACCACAATTCGC 58.028 40.909 0.00 0.00 0.00 4.70
73 74 7.988904 TTTAACCAAAAACTACCACAATTCG 57.011 32.000 0.00 0.00 0.00 3.34
77 78 8.631797 GGAGTATTTAACCAAAAACTACCACAA 58.368 33.333 0.00 0.00 0.00 3.33
78 79 7.041235 CGGAGTATTTAACCAAAAACTACCACA 60.041 37.037 0.00 0.00 0.00 4.17
79 80 7.173047 TCGGAGTATTTAACCAAAAACTACCAC 59.827 37.037 0.00 0.00 0.00 4.16
80 81 7.222872 TCGGAGTATTTAACCAAAAACTACCA 58.777 34.615 0.00 0.00 0.00 3.25
81 82 7.148356 CCTCGGAGTATTTAACCAAAAACTACC 60.148 40.741 4.02 0.00 0.00 3.18
82 83 7.388776 ACCTCGGAGTATTTAACCAAAAACTAC 59.611 37.037 4.02 0.00 0.00 2.73
83 84 7.388500 CACCTCGGAGTATTTAACCAAAAACTA 59.612 37.037 4.02 0.00 0.00 2.24
84 85 6.206048 CACCTCGGAGTATTTAACCAAAAACT 59.794 38.462 4.02 0.00 0.00 2.66
85 86 6.205270 TCACCTCGGAGTATTTAACCAAAAAC 59.795 38.462 4.02 0.00 0.00 2.43
86 87 6.297582 TCACCTCGGAGTATTTAACCAAAAA 58.702 36.000 4.02 0.00 0.00 1.94
87 88 5.867330 TCACCTCGGAGTATTTAACCAAAA 58.133 37.500 4.02 0.00 0.00 2.44
88 89 5.484715 CTCACCTCGGAGTATTTAACCAAA 58.515 41.667 4.02 0.00 0.00 3.28
89 90 4.622220 GCTCACCTCGGAGTATTTAACCAA 60.622 45.833 4.02 0.00 37.24 3.67
90 91 3.118884 GCTCACCTCGGAGTATTTAACCA 60.119 47.826 4.02 0.00 37.24 3.67
91 92 3.455327 GCTCACCTCGGAGTATTTAACC 58.545 50.000 4.02 0.00 37.24 2.85
92 93 3.118884 TGGCTCACCTCGGAGTATTTAAC 60.119 47.826 4.02 0.00 37.24 2.01
93 94 3.101437 TGGCTCACCTCGGAGTATTTAA 58.899 45.455 4.02 0.00 37.24 1.52
94 95 2.693591 CTGGCTCACCTCGGAGTATTTA 59.306 50.000 4.02 0.00 37.24 1.40
95 96 1.482593 CTGGCTCACCTCGGAGTATTT 59.517 52.381 4.02 0.00 37.24 1.40
96 97 1.115467 CTGGCTCACCTCGGAGTATT 58.885 55.000 4.02 0.00 37.24 1.89
97 98 0.259065 TCTGGCTCACCTCGGAGTAT 59.741 55.000 4.02 0.00 37.24 2.12
98 99 0.394488 CTCTGGCTCACCTCGGAGTA 60.394 60.000 4.02 0.00 37.24 2.59
99 100 1.680651 CTCTGGCTCACCTCGGAGT 60.681 63.158 4.02 0.00 37.24 3.85
100 101 1.379176 TCTCTGGCTCACCTCGGAG 60.379 63.158 0.00 0.00 37.97 4.63
101 102 1.379176 CTCTCTGGCTCACCTCGGA 60.379 63.158 0.00 0.00 36.63 4.55
102 103 1.379176 TCTCTCTGGCTCACCTCGG 60.379 63.158 0.00 0.00 36.63 4.63
103 104 0.393673 TCTCTCTCTGGCTCACCTCG 60.394 60.000 0.00 0.00 36.63 4.63
104 105 1.064758 TCTCTCTCTCTGGCTCACCTC 60.065 57.143 0.00 0.00 36.63 3.85
105 106 0.998928 TCTCTCTCTCTGGCTCACCT 59.001 55.000 0.00 0.00 36.63 4.00
106 107 1.064758 TCTCTCTCTCTCTGGCTCACC 60.065 57.143 0.00 0.00 0.00 4.02
107 108 2.292267 CTCTCTCTCTCTCTGGCTCAC 58.708 57.143 0.00 0.00 0.00 3.51
108 109 1.915489 ACTCTCTCTCTCTCTGGCTCA 59.085 52.381 0.00 0.00 0.00 4.26
109 110 2.092968 TCACTCTCTCTCTCTCTGGCTC 60.093 54.545 0.00 0.00 0.00 4.70
110 111 1.915489 TCACTCTCTCTCTCTCTGGCT 59.085 52.381 0.00 0.00 0.00 4.75
111 112 2.292267 CTCACTCTCTCTCTCTCTGGC 58.708 57.143 0.00 0.00 0.00 4.85
112 113 2.092753 AGCTCACTCTCTCTCTCTCTGG 60.093 54.545 0.00 0.00 0.00 3.86
113 114 2.941064 CAGCTCACTCTCTCTCTCTCTG 59.059 54.545 0.00 0.00 0.00 3.35
114 115 2.681976 GCAGCTCACTCTCTCTCTCTCT 60.682 54.545 0.00 0.00 0.00 3.10
115 116 1.672881 GCAGCTCACTCTCTCTCTCTC 59.327 57.143 0.00 0.00 0.00 3.20
116 117 1.683011 GGCAGCTCACTCTCTCTCTCT 60.683 57.143 0.00 0.00 0.00 3.10
117 118 0.740737 GGCAGCTCACTCTCTCTCTC 59.259 60.000 0.00 0.00 0.00 3.20
118 119 0.039472 TGGCAGCTCACTCTCTCTCT 59.961 55.000 0.00 0.00 0.00 3.10
119 120 1.113788 ATGGCAGCTCACTCTCTCTC 58.886 55.000 0.00 0.00 0.00 3.20
120 121 0.825410 CATGGCAGCTCACTCTCTCT 59.175 55.000 0.00 0.00 0.00 3.10
121 122 0.179078 CCATGGCAGCTCACTCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
122 123 0.908656 ACCATGGCAGCTCACTCTCT 60.909 55.000 13.04 0.00 0.00 3.10
123 124 0.035630 AACCATGGCAGCTCACTCTC 60.036 55.000 13.04 0.00 0.00 3.20
124 125 0.403271 AAACCATGGCAGCTCACTCT 59.597 50.000 13.04 0.00 0.00 3.24
125 126 0.524862 CAAACCATGGCAGCTCACTC 59.475 55.000 13.04 0.00 0.00 3.51
126 127 0.178981 ACAAACCATGGCAGCTCACT 60.179 50.000 13.04 0.00 0.00 3.41
127 128 0.675633 AACAAACCATGGCAGCTCAC 59.324 50.000 13.04 0.00 0.00 3.51
128 129 2.284754 TAACAAACCATGGCAGCTCA 57.715 45.000 13.04 0.00 0.00 4.26
186 189 5.697826 CAAAAGCAAACAACACACCAAAAT 58.302 33.333 0.00 0.00 0.00 1.82
187 190 4.555511 GCAAAAGCAAACAACACACCAAAA 60.556 37.500 0.00 0.00 0.00 2.44
188 191 3.058639 GCAAAAGCAAACAACACACCAAA 60.059 39.130 0.00 0.00 0.00 3.28
189 192 2.481952 GCAAAAGCAAACAACACACCAA 59.518 40.909 0.00 0.00 0.00 3.67
190 193 2.072298 GCAAAAGCAAACAACACACCA 58.928 42.857 0.00 0.00 0.00 4.17
191 194 2.094099 CAGCAAAAGCAAACAACACACC 59.906 45.455 0.00 0.00 0.00 4.16
192 195 2.094099 CCAGCAAAAGCAAACAACACAC 59.906 45.455 0.00 0.00 0.00 3.82
193 196 2.344950 CCAGCAAAAGCAAACAACACA 58.655 42.857 0.00 0.00 0.00 3.72
199 202 1.597854 GCCCCCAGCAAAAGCAAAC 60.598 57.895 0.00 0.00 42.97 2.93
254 311 9.567776 CATGTGGGGTTATAATCAGTATAAACA 57.432 33.333 2.50 0.00 42.17 2.83
260 317 5.638530 TGCATGTGGGGTTATAATCAGTA 57.361 39.130 0.00 0.00 0.00 2.74
264 321 5.460646 CGAAATGCATGTGGGGTTATAATC 58.539 41.667 0.00 0.00 0.00 1.75
273 340 2.223144 CGTATACCGAAATGCATGTGGG 59.777 50.000 15.94 15.94 39.56 4.61
276 343 2.833794 AGCGTATACCGAAATGCATGT 58.166 42.857 0.00 0.00 39.56 3.21
304 375 3.374745 CACATAAATTGCATTCCCTCGC 58.625 45.455 0.00 0.00 0.00 5.03
318 389 7.453938 ACGAAGTACTTGCTCTTGCACATAAA 61.454 38.462 14.14 0.00 45.82 1.40
393 500 1.985447 ATCCTGTTGCATGCGCTTCG 61.985 55.000 14.09 0.09 39.64 3.79
394 501 0.524816 CATCCTGTTGCATGCGCTTC 60.525 55.000 14.09 3.84 39.64 3.86
435 546 5.866159 TTATGGTTATCATGCATTTGCCA 57.134 34.783 0.00 1.96 41.18 4.92
437 548 9.480053 AAGTAATTATGGTTATCATGCATTTGC 57.520 29.630 0.00 0.00 42.50 3.68
439 550 9.985730 CCAAGTAATTATGGTTATCATGCATTT 57.014 29.630 0.00 0.00 37.30 2.32
441 552 7.452501 AGCCAAGTAATTATGGTTATCATGCAT 59.547 33.333 6.91 0.00 39.00 3.96
442 553 6.777091 AGCCAAGTAATTATGGTTATCATGCA 59.223 34.615 6.91 0.00 39.00 3.96
443 554 7.219484 AGCCAAGTAATTATGGTTATCATGC 57.781 36.000 6.91 0.00 39.00 4.06
444 555 9.683069 GAAAGCCAAGTAATTATGGTTATCATG 57.317 33.333 6.91 0.00 39.00 3.07
446 557 8.815565 TGAAAGCCAAGTAATTATGGTTATCA 57.184 30.769 6.91 6.09 39.00 2.15
447 558 8.352942 CCTGAAAGCCAAGTAATTATGGTTATC 58.647 37.037 6.91 4.13 39.00 1.75
465 580 0.032540 CTTTGTGTGGCCCTGAAAGC 59.967 55.000 0.00 0.00 0.00 3.51
466 581 0.032540 GCTTTGTGTGGCCCTGAAAG 59.967 55.000 0.00 4.79 0.00 2.62
555 675 0.328258 CTCCCATCCTTCAACCCGTT 59.672 55.000 0.00 0.00 0.00 4.44
570 690 1.737793 CGATGTAAAGGTGTTGCTCCC 59.262 52.381 0.00 0.00 0.00 4.30
577 697 4.320023 TGCATGTAACGATGTAAAGGTGT 58.680 39.130 0.00 0.00 0.00 4.16
608 731 0.747255 TTCTACTCAGATGCGGAGGC 59.253 55.000 0.00 0.00 36.70 4.70
612 735 2.544685 CACCTTTCTACTCAGATGCGG 58.455 52.381 0.00 0.00 0.00 5.69
618 747 1.677217 GGCTGCCACCTTTCTACTCAG 60.677 57.143 15.17 0.00 0.00 3.35
754 899 3.154473 CCTCCGCCCTCCGATGAA 61.154 66.667 0.00 0.00 40.02 2.57
791 936 4.147449 CCAGCGACCGATCTGCCA 62.147 66.667 0.00 0.00 0.00 4.92
793 938 2.279120 CTCCAGCGACCGATCTGC 60.279 66.667 0.00 0.00 0.00 4.26
794 939 2.069465 CTCCTCCAGCGACCGATCTG 62.069 65.000 0.00 0.00 0.00 2.90
1072 1484 3.826754 CTCGGCTGCTCCACGCTA 61.827 66.667 0.00 0.00 40.11 4.26
1077 1489 1.754621 CTACTCCTCGGCTGCTCCA 60.755 63.158 0.00 0.00 34.01 3.86
1078 1490 3.124686 CTACTCCTCGGCTGCTCC 58.875 66.667 0.00 0.00 0.00 4.70
1080 1492 0.821711 CTAGCTACTCCTCGGCTGCT 60.822 60.000 0.00 0.00 37.50 4.24
1081 1493 1.657556 CTAGCTACTCCTCGGCTGC 59.342 63.158 0.00 0.00 37.50 5.25
1082 1494 0.821711 AGCTAGCTACTCCTCGGCTG 60.822 60.000 17.69 0.00 37.50 4.85
1083 1495 0.536460 GAGCTAGCTACTCCTCGGCT 60.536 60.000 19.38 6.59 39.74 5.52
1084 1496 0.820074 TGAGCTAGCTACTCCTCGGC 60.820 60.000 19.38 1.94 32.98 5.54
1085 1497 1.606668 CTTGAGCTAGCTACTCCTCGG 59.393 57.143 19.38 0.00 32.98 4.63
1086 1498 2.294074 ACTTGAGCTAGCTACTCCTCG 58.706 52.381 19.38 4.78 32.98 4.63
1108 1520 1.315981 CCAGGAGTGAGCTAGCGTGA 61.316 60.000 9.55 0.00 0.00 4.35
1119 1531 1.153289 CCGATGGAAGCCAGGAGTG 60.153 63.158 0.00 0.00 36.75 3.51
1120 1532 1.306141 TCCGATGGAAGCCAGGAGT 60.306 57.895 0.00 0.00 36.75 3.85
1218 1643 5.587388 AATAAATGGATGCTGGTGAACTG 57.413 39.130 0.00 0.00 0.00 3.16
1223 1648 3.962718 AGGGAAATAAATGGATGCTGGTG 59.037 43.478 0.00 0.00 0.00 4.17
1239 1664 3.135895 AGAAGAAGAAACCACGAGGGAAA 59.864 43.478 3.29 0.00 41.15 3.13
1240 1665 2.704065 AGAAGAAGAAACCACGAGGGAA 59.296 45.455 3.29 0.00 41.15 3.97
1241 1666 2.299297 GAGAAGAAGAAACCACGAGGGA 59.701 50.000 3.29 0.00 41.15 4.20
1242 1667 2.300437 AGAGAAGAAGAAACCACGAGGG 59.700 50.000 3.29 0.00 44.81 4.30
1276 1701 1.678598 TAAGGGTGTCCGGGTATGCG 61.679 60.000 0.00 0.00 38.33 4.73
1279 1704 1.273438 ACAGTAAGGGTGTCCGGGTAT 60.273 52.381 0.00 0.00 38.33 2.73
1285 1713 1.453155 CATGCACAGTAAGGGTGTCC 58.547 55.000 0.00 0.00 38.51 4.02
1288 1716 0.806868 CAGCATGCACAGTAAGGGTG 59.193 55.000 21.98 0.69 39.25 4.61
1318 1746 4.717629 CCACGAAGCACGCTCCGA 62.718 66.667 4.20 0.00 46.94 4.55
1358 1786 0.734253 CTTCTCCTCCGACAAGCACG 60.734 60.000 0.00 0.00 0.00 5.34
1362 1790 1.131504 CTCGTCTTCTCCTCCGACAAG 59.868 57.143 0.00 0.00 0.00 3.16
1391 1819 2.597510 GGGCCAACCTTTCGCTGT 60.598 61.111 4.39 0.00 35.85 4.40
1425 1858 1.613925 AGTTCAGTCAGTCAAGCGCTA 59.386 47.619 12.05 0.00 0.00 4.26
1434 1867 1.007271 CGCACCGAGTTCAGTCAGT 60.007 57.895 0.00 0.00 0.00 3.41
1437 1870 3.470567 CGCGCACCGAGTTCAGTC 61.471 66.667 8.75 0.00 40.02 3.51
1484 1917 2.426522 AGAACGTACGTACCAGTGCTA 58.573 47.619 23.12 0.00 0.00 3.49
1485 1918 1.242076 AGAACGTACGTACCAGTGCT 58.758 50.000 23.12 13.38 0.00 4.40
1486 1919 1.981533 GAAGAACGTACGTACCAGTGC 59.018 52.381 23.12 11.35 0.00 4.40
1487 1920 2.227388 AGGAAGAACGTACGTACCAGTG 59.773 50.000 23.12 8.34 0.00 3.66
1488 1921 2.227388 CAGGAAGAACGTACGTACCAGT 59.773 50.000 23.12 5.08 0.00 4.00
1489 1922 2.860062 CAGGAAGAACGTACGTACCAG 58.140 52.381 23.12 14.85 0.00 4.00
1490 1923 1.068333 GCAGGAAGAACGTACGTACCA 60.068 52.381 23.12 0.00 0.00 3.25
1491 1924 1.622232 GCAGGAAGAACGTACGTACC 58.378 55.000 23.12 20.53 0.00 3.34
1492 1925 1.253999 CGCAGGAAGAACGTACGTAC 58.746 55.000 23.12 15.90 0.00 3.67
1493 1926 0.454957 GCGCAGGAAGAACGTACGTA 60.455 55.000 23.12 0.00 0.00 3.57
1494 1927 1.731969 GCGCAGGAAGAACGTACGT 60.732 57.895 16.72 16.72 0.00 3.57
1495 1928 2.442188 GGCGCAGGAAGAACGTACG 61.442 63.158 15.01 15.01 0.00 3.67
1548 1981 6.563422 ACGATCAATCAAGAGAGAGAAAGAG 58.437 40.000 0.00 0.00 0.00 2.85
1549 1982 6.522625 ACGATCAATCAAGAGAGAGAAAGA 57.477 37.500 0.00 0.00 0.00 2.52
1550 1983 7.920151 ACATACGATCAATCAAGAGAGAGAAAG 59.080 37.037 0.00 0.00 0.00 2.62
1551 1984 7.704047 CACATACGATCAATCAAGAGAGAGAAA 59.296 37.037 0.00 0.00 0.00 2.52
1552 1985 7.148000 ACACATACGATCAATCAAGAGAGAGAA 60.148 37.037 0.00 0.00 0.00 2.87
1553 1986 6.319911 ACACATACGATCAATCAAGAGAGAGA 59.680 38.462 0.00 0.00 0.00 3.10
1554 1987 6.502652 ACACATACGATCAATCAAGAGAGAG 58.497 40.000 0.00 0.00 0.00 3.20
1597 2036 6.930164 AGTGACACGACTGACCTATATACTAG 59.070 42.308 0.00 0.00 0.00 2.57
1599 2038 5.682659 AGTGACACGACTGACCTATATACT 58.317 41.667 0.00 0.00 0.00 2.12
1600 2039 6.183360 ACAAGTGACACGACTGACCTATATAC 60.183 42.308 10.98 0.00 0.00 1.47
1602 2041 4.705507 ACAAGTGACACGACTGACCTATAT 59.294 41.667 10.98 0.00 0.00 0.86
1604 2043 2.891580 ACAAGTGACACGACTGACCTAT 59.108 45.455 10.98 0.00 0.00 2.57
1605 2044 2.292569 GACAAGTGACACGACTGACCTA 59.707 50.000 10.98 0.00 0.00 3.08
1606 2045 1.067212 GACAAGTGACACGACTGACCT 59.933 52.381 10.98 0.00 0.00 3.85
1607 2046 1.202371 TGACAAGTGACACGACTGACC 60.202 52.381 10.98 4.84 0.00 4.02
1609 2048 1.749063 ACTGACAAGTGACACGACTGA 59.251 47.619 10.98 0.00 34.48 3.41
1610 2049 2.209838 ACTGACAAGTGACACGACTG 57.790 50.000 0.00 2.14 34.48 3.51
1611 2050 3.318275 ACATACTGACAAGTGACACGACT 59.682 43.478 0.00 0.00 37.19 4.18
1612 2051 3.639538 ACATACTGACAAGTGACACGAC 58.360 45.455 0.00 0.00 37.19 4.34
1615 2054 5.533482 AGAGAACATACTGACAAGTGACAC 58.467 41.667 0.00 0.00 37.19 3.67
1616 2055 5.279006 GGAGAGAACATACTGACAAGTGACA 60.279 44.000 0.00 0.00 37.19 3.58
1618 2057 5.080337 AGGAGAGAACATACTGACAAGTGA 58.920 41.667 0.00 0.00 37.19 3.41
1619 2058 5.398603 AGGAGAGAACATACTGACAAGTG 57.601 43.478 0.00 0.00 37.19 3.16
1620 2059 4.464597 GGAGGAGAGAACATACTGACAAGT 59.535 45.833 0.00 0.00 40.67 3.16
1621 2060 4.709397 AGGAGGAGAGAACATACTGACAAG 59.291 45.833 0.00 0.00 0.00 3.16
1622 2061 4.678256 AGGAGGAGAGAACATACTGACAA 58.322 43.478 0.00 0.00 0.00 3.18
1626 2065 4.280677 GGATGAGGAGGAGAGAACATACTG 59.719 50.000 0.00 0.00 0.00 2.74
1654 2272 9.468532 GCAAGTCAAAACTAATCAAATTTCTCT 57.531 29.630 0.00 0.00 33.48 3.10
1664 2282 7.394872 CAGTAGATCGCAAGTCAAAACTAATC 58.605 38.462 0.00 0.00 33.48 1.75
1739 2357 8.144862 TGAGCCCCATATTTTTCTATTGTTTT 57.855 30.769 0.00 0.00 0.00 2.43
1742 2360 7.564660 TGATTGAGCCCCATATTTTTCTATTGT 59.435 33.333 0.00 0.00 0.00 2.71
1743 2361 7.954835 TGATTGAGCCCCATATTTTTCTATTG 58.045 34.615 0.00 0.00 0.00 1.90
1746 2364 9.246670 CATATGATTGAGCCCCATATTTTTCTA 57.753 33.333 0.00 0.00 32.83 2.10
1747 2365 7.179694 CCATATGATTGAGCCCCATATTTTTCT 59.820 37.037 3.65 0.00 32.83 2.52
1748 2366 7.038799 ACCATATGATTGAGCCCCATATTTTTC 60.039 37.037 3.65 0.00 32.83 2.29
1848 2466 6.128145 GCTCCTTTGATCTGGAACTAAAAGAC 60.128 42.308 0.00 0.00 31.23 3.01
1951 2570 4.501071 TCGTCTGGCCATCTAGTAAAAAC 58.499 43.478 5.51 0.00 0.00 2.43
2018 2637 7.186040 TGGGGTTAAACCTAGGTTATTCCAATA 59.814 37.037 27.33 11.38 38.64 1.90
2042 2663 0.889994 TGCCTTGCTTTGCTATGTGG 59.110 50.000 0.00 0.00 0.00 4.17
2056 2677 3.213506 GCCTTTTGTTTTGGATTGCCTT 58.786 40.909 0.00 0.00 34.31 4.35
2066 2687 6.183360 GGACAATTTTCATGGCCTTTTGTTTT 60.183 34.615 3.32 0.00 43.09 2.43
2117 2738 2.955660 AGGCAAACCAAGTTGAATCGAA 59.044 40.909 3.87 0.00 39.06 3.71
2118 2739 2.582052 AGGCAAACCAAGTTGAATCGA 58.418 42.857 3.87 0.00 39.06 3.59
2120 2741 5.705609 TTCTAGGCAAACCAAGTTGAATC 57.294 39.130 3.87 0.00 39.06 2.52
2234 2856 5.562506 TCGTAACTCTGTGGACTTCTATG 57.437 43.478 0.00 0.00 0.00 2.23
2288 2910 6.433404 TGGCAATTTTCATGGCATTTGTTTAT 59.567 30.769 0.00 0.00 46.85 1.40
2318 2940 7.126268 TGTTCCCTGATATTCTCTTTCTCATCA 59.874 37.037 0.00 0.00 0.00 3.07
2512 3141 4.491676 AGTCGACACAACTTTGCGTATAT 58.508 39.130 19.50 0.00 0.00 0.86
2679 3311 7.973944 AGGTGTTTCTAAATGAAAATAATCGGC 59.026 33.333 0.00 0.00 45.10 5.54
2706 3338 2.837878 GTGTGCGCGTTTATGTTGTATG 59.162 45.455 8.43 0.00 0.00 2.39
2722 3354 4.260375 GCTTACTAGTATGCATGTGTGTGC 60.260 45.833 27.25 7.67 45.25 4.57
2735 3367 5.435291 GTGTGGACTAGAGGCTTACTAGTA 58.565 45.833 14.00 0.00 46.74 1.82
2738 3370 3.276857 CGTGTGGACTAGAGGCTTACTA 58.723 50.000 0.00 0.00 0.00 1.82
2755 3387 1.464608 GCAGATATTGTGTGTGCGTGT 59.535 47.619 0.00 0.00 0.00 4.49
2756 3388 1.733912 AGCAGATATTGTGTGTGCGTG 59.266 47.619 0.00 0.00 39.19 5.34
2757 3389 1.733912 CAGCAGATATTGTGTGTGCGT 59.266 47.619 0.00 0.00 39.19 5.24
2758 3390 2.001872 TCAGCAGATATTGTGTGTGCG 58.998 47.619 0.00 0.00 39.19 5.34
2759 3391 3.686241 TCTTCAGCAGATATTGTGTGTGC 59.314 43.478 0.00 0.00 0.00 4.57
2760 3392 6.093082 TCAATCTTCAGCAGATATTGTGTGTG 59.907 38.462 11.80 0.00 41.93 3.82
2761 3393 6.175471 TCAATCTTCAGCAGATATTGTGTGT 58.825 36.000 11.80 0.00 41.93 3.72
2774 3409 2.167075 CCCCATGGTTTCAATCTTCAGC 59.833 50.000 11.73 0.00 0.00 4.26
2799 3434 4.864806 AGTGACGTACATGTGTTGATCATC 59.135 41.667 9.11 0.00 0.00 2.92
2828 3463 3.196469 GTGAGAGTGAGATGATGTTCCCA 59.804 47.826 0.00 0.00 0.00 4.37
2880 3515 1.555075 TCCTAGGTTTGATGCTTCGCT 59.445 47.619 9.08 0.00 0.00 4.93
2908 3543 0.032403 TGTAACCCAACGACCGTGAG 59.968 55.000 0.00 0.00 0.00 3.51
2912 3551 1.997606 GAGATTGTAACCCAACGACCG 59.002 52.381 0.00 0.00 35.44 4.79
2915 3554 2.235402 GAGGGAGATTGTAACCCAACGA 59.765 50.000 0.00 0.00 45.43 3.85
2931 3570 4.112634 ACTAGTGCAATTTTTGGAGGGA 57.887 40.909 0.00 0.00 0.00 4.20
2995 3634 8.573035 TGTAACCCTTTTAGATCAACACATTTC 58.427 33.333 0.00 0.00 0.00 2.17
2997 3636 8.472007 TTGTAACCCTTTTAGATCAACACATT 57.528 30.769 0.00 0.00 0.00 2.71
3095 3760 6.657541 TGAAAAATGGGATAGTGGTCTTGTAC 59.342 38.462 0.00 0.00 0.00 2.90
3172 3842 3.054287 TGATTAGCCCGGAACATGGTTTA 60.054 43.478 0.73 0.00 0.00 2.01
3175 3845 0.916086 TGATTAGCCCGGAACATGGT 59.084 50.000 0.73 0.00 0.00 3.55
3221 3899 2.645838 ATGTTGCAGGTAGCCATAGG 57.354 50.000 0.00 0.00 44.83 2.57
3248 3926 6.528423 CCTCGTATGATAGTGCTTAGTTATGC 59.472 42.308 0.00 0.00 0.00 3.14
3249 3927 6.528423 GCCTCGTATGATAGTGCTTAGTTATG 59.472 42.308 0.00 0.00 0.00 1.90
3250 3928 6.208797 TGCCTCGTATGATAGTGCTTAGTTAT 59.791 38.462 0.00 0.00 0.00 1.89
3251 3929 5.533528 TGCCTCGTATGATAGTGCTTAGTTA 59.466 40.000 0.00 0.00 0.00 2.24
3252 3930 4.341235 TGCCTCGTATGATAGTGCTTAGTT 59.659 41.667 0.00 0.00 0.00 2.24
3253 3931 3.889538 TGCCTCGTATGATAGTGCTTAGT 59.110 43.478 0.00 0.00 0.00 2.24
3254 3932 4.505313 TGCCTCGTATGATAGTGCTTAG 57.495 45.455 0.00 0.00 0.00 2.18
3309 3987 6.920569 ACAAAATTTATACGAGCCCACTAG 57.079 37.500 0.00 0.00 0.00 2.57
3310 3988 8.967664 ATTACAAAATTTATACGAGCCCACTA 57.032 30.769 0.00 0.00 0.00 2.74
3313 3991 6.975772 GCAATTACAAAATTTATACGAGCCCA 59.024 34.615 0.00 0.00 32.87 5.36
3314 3992 6.419710 GGCAATTACAAAATTTATACGAGCCC 59.580 38.462 0.00 0.00 32.87 5.19
3315 3993 7.200455 AGGCAATTACAAAATTTATACGAGCC 58.800 34.615 9.16 9.16 35.76 4.70
3317 3995 9.567848 ACAAGGCAATTACAAAATTTATACGAG 57.432 29.630 0.00 0.00 32.87 4.18
3351 4029 4.588951 TGCGACATCTTATAATCCCTCTGT 59.411 41.667 0.00 0.00 0.00 3.41
3360 4038 6.405538 TCCATGCATATGCGACATCTTATAA 58.594 36.000 22.21 0.80 45.83 0.98
3376 4055 1.142465 GGTCACTCCATCTCCATGCAT 59.858 52.381 0.00 0.00 35.97 3.96
3450 4131 5.560148 CAAGTTAGTTGACAGTTGACACAC 58.440 41.667 0.00 0.00 38.60 3.82
3451 4132 4.094294 GCAAGTTAGTTGACAGTTGACACA 59.906 41.667 3.69 0.00 38.60 3.72
3480 4161 8.806429 TTCTTCCACTGATCAAAATAATAGCA 57.194 30.769 0.00 0.00 0.00 3.49
3481 4162 9.113838 TCTTCTTCCACTGATCAAAATAATAGC 57.886 33.333 0.00 0.00 0.00 2.97
3518 4203 3.506808 CCAGGTGGGACATGGGAA 58.493 61.111 0.00 0.00 45.60 3.97
3530 4215 0.466739 GGTGGAAACGGAAACCAGGT 60.467 55.000 0.00 0.00 34.21 4.00
3557 4242 3.181478 GGTAGTAATCCACCAGTTCCTCG 60.181 52.174 0.00 0.00 34.77 4.63
3716 4478 0.036765 AGGTGACGCGCATAGGAAAA 60.037 50.000 5.73 0.00 0.00 2.29
3731 4493 5.105310 ACCTAGAGTAGTGTATTGCAAGGTG 60.105 44.000 4.94 0.00 29.86 4.00
3754 4520 3.465742 TCTGCCAATCATGCTAGAGAC 57.534 47.619 0.00 0.00 0.00 3.36
3755 4521 4.492494 TTTCTGCCAATCATGCTAGAGA 57.508 40.909 0.00 0.00 0.00 3.10
3756 4522 5.571784 TTTTTCTGCCAATCATGCTAGAG 57.428 39.130 0.00 0.00 0.00 2.43
3757 4523 5.653330 TCATTTTTCTGCCAATCATGCTAGA 59.347 36.000 0.00 0.00 0.00 2.43
3758 4524 5.747197 GTCATTTTTCTGCCAATCATGCTAG 59.253 40.000 0.00 0.00 0.00 3.42
3759 4525 5.653507 GTCATTTTTCTGCCAATCATGCTA 58.346 37.500 0.00 0.00 0.00 3.49
3760 4526 4.501071 GTCATTTTTCTGCCAATCATGCT 58.499 39.130 0.00 0.00 0.00 3.79
3761 4527 3.305094 CGTCATTTTTCTGCCAATCATGC 59.695 43.478 0.00 0.00 0.00 4.06
3769 4535 0.313672 TGGCACGTCATTTTTCTGCC 59.686 50.000 1.25 1.25 46.49 4.85
3785 4551 3.523547 TGAATTTAATGCATGCACTGGC 58.476 40.909 25.37 9.45 41.68 4.85
3791 4557 7.266756 CGTTCAAAAACTGAATTTAATGCATGC 59.733 33.333 11.82 11.82 45.74 4.06
3847 4613 3.616821 CGTTCCAATCTTGCATCGTTCTA 59.383 43.478 0.00 0.00 0.00 2.10
3863 4629 0.032952 CGTTCTGGTCTTCCGTTCCA 59.967 55.000 0.00 0.00 36.30 3.53
3920 4686 0.533491 TATTAGTGCGAGTGCCGGTT 59.467 50.000 1.90 0.00 41.78 4.44
3980 4746 1.746787 TGCTTCACGTAGATCGGCTTA 59.253 47.619 0.00 0.00 44.69 3.09
4065 4831 1.871676 CTCGTGCATGATCCAATCCAG 59.128 52.381 9.53 0.00 0.00 3.86
4097 4863 1.886542 GGAGCTCCATTTTCGTTGGTT 59.113 47.619 28.43 0.00 35.64 3.67
4147 4913 7.047271 TGATTACTACTAGCATGCACATTTGA 58.953 34.615 21.98 0.00 0.00 2.69
4171 4938 4.897509 TGGAGGGAGTATGATGCTAATG 57.102 45.455 0.00 0.00 0.00 1.90
4178 4945 1.433199 TCCGGATGGAGGGAGTATGAT 59.567 52.381 0.00 0.00 40.17 2.45
4188 4955 8.543352 TTTGATGACAAGTATTTCCGGATGGAG 61.543 40.741 4.15 0.00 40.39 3.86
4189 4956 4.163268 TGATGACAAGTATTTCCGGATGGA 59.837 41.667 4.15 0.00 44.61 3.41
4190 4957 4.450976 TGATGACAAGTATTTCCGGATGG 58.549 43.478 4.15 0.00 0.00 3.51
4191 4958 6.435430 TTTGATGACAAGTATTTCCGGATG 57.565 37.500 4.15 0.97 37.32 3.51
4192 4959 7.645058 ATTTTGATGACAAGTATTTCCGGAT 57.355 32.000 4.15 0.00 37.32 4.18
4193 4960 8.568676 TTATTTTGATGACAAGTATTTCCGGA 57.431 30.769 0.00 0.00 37.32 5.14
4194 4961 9.801873 ATTTATTTTGATGACAAGTATTTCCGG 57.198 29.630 0.00 0.00 37.32 5.14
4262 5029 9.918630 ACTTGTCATCAAAATGGATAAAAAGAG 57.081 29.630 0.00 0.00 33.42 2.85
4270 5037 9.865321 CTGAAAATACTTGTCATCAAAATGGAT 57.135 29.630 0.00 0.00 33.42 3.41
4271 5038 9.076781 TCTGAAAATACTTGTCATCAAAATGGA 57.923 29.630 0.00 0.00 33.42 3.41
4272 5039 9.132521 GTCTGAAAATACTTGTCATCAAAATGG 57.867 33.333 0.00 0.00 33.42 3.16
4273 5040 8.843733 CGTCTGAAAATACTTGTCATCAAAATG 58.156 33.333 0.00 0.00 32.87 2.32
4274 5041 8.023128 CCGTCTGAAAATACTTGTCATCAAAAT 58.977 33.333 0.00 0.00 32.87 1.82
4275 5042 7.227711 TCCGTCTGAAAATACTTGTCATCAAAA 59.772 33.333 0.00 0.00 32.87 2.44
4276 5043 6.708502 TCCGTCTGAAAATACTTGTCATCAAA 59.291 34.615 0.00 0.00 32.87 2.69
4277 5044 6.227522 TCCGTCTGAAAATACTTGTCATCAA 58.772 36.000 0.00 0.00 0.00 2.57
4278 5045 5.789521 TCCGTCTGAAAATACTTGTCATCA 58.210 37.500 0.00 0.00 0.00 3.07
4279 5046 5.292101 CCTCCGTCTGAAAATACTTGTCATC 59.708 44.000 0.00 0.00 0.00 2.92
4280 5047 5.046591 TCCTCCGTCTGAAAATACTTGTCAT 60.047 40.000 0.00 0.00 0.00 3.06
4281 5048 4.282449 TCCTCCGTCTGAAAATACTTGTCA 59.718 41.667 0.00 0.00 0.00 3.58
4282 5049 4.817517 TCCTCCGTCTGAAAATACTTGTC 58.182 43.478 0.00 0.00 0.00 3.18
4283 5050 4.884668 TCCTCCGTCTGAAAATACTTGT 57.115 40.909 0.00 0.00 0.00 3.16
4284 5051 5.238583 ACTTCCTCCGTCTGAAAATACTTG 58.761 41.667 0.00 0.00 0.00 3.16
4285 5052 5.485209 ACTTCCTCCGTCTGAAAATACTT 57.515 39.130 0.00 0.00 0.00 2.24
4286 5053 5.105432 GGTACTTCCTCCGTCTGAAAATACT 60.105 44.000 0.00 0.00 0.00 2.12
4287 5054 5.107824 GGTACTTCCTCCGTCTGAAAATAC 58.892 45.833 0.00 0.00 0.00 1.89
4288 5055 4.142315 CGGTACTTCCTCCGTCTGAAAATA 60.142 45.833 0.00 0.00 41.58 1.40
4289 5056 3.368116 CGGTACTTCCTCCGTCTGAAAAT 60.368 47.826 0.00 0.00 41.58 1.82
4290 5057 2.029649 CGGTACTTCCTCCGTCTGAAAA 60.030 50.000 0.00 0.00 41.58 2.29
4291 5058 1.542915 CGGTACTTCCTCCGTCTGAAA 59.457 52.381 0.00 0.00 41.58 2.69
4292 5059 1.171308 CGGTACTTCCTCCGTCTGAA 58.829 55.000 0.00 0.00 41.58 3.02
4293 5060 2.864114 CGGTACTTCCTCCGTCTGA 58.136 57.895 0.00 0.00 41.58 3.27
4299 5066 2.956913 GTGAAGAACGGTACTTCCTCC 58.043 52.381 13.09 0.00 41.83 4.30
4319 5086 1.411246 TCGTTAGGGATGGAATGGTCG 59.589 52.381 0.00 0.00 0.00 4.79
4445 5212 1.874345 GAACCAGAAGGGCGAGTCGA 61.874 60.000 18.61 0.00 42.05 4.20
4575 5342 1.591703 CAGCTCTACCTTGCACGGA 59.408 57.895 17.43 0.00 0.00 4.69
4873 5640 3.423154 CTCCGCCTGAAACGCCAC 61.423 66.667 0.00 0.00 0.00 5.01
4938 5705 0.856982 ACAAACCATTGTCCCCTCCA 59.143 50.000 0.00 0.00 46.78 3.86
4985 5752 7.305304 GCGTTAGTGTGTATCTTTTCGTATCTC 60.305 40.741 0.00 0.00 0.00 2.75
5120 5892 6.737346 GTACATGCAAGTACAACCAATTTGGT 60.737 38.462 23.55 15.48 43.65 3.67
5143 5915 6.307776 TGAACATTACACCCTCCAAATTGTA 58.692 36.000 0.00 0.00 0.00 2.41
5165 5937 3.141398 CCTAGGCGGTAGTACGTTATGA 58.859 50.000 0.00 0.00 35.98 2.15
5166 5938 2.351157 GCCTAGGCGGTAGTACGTTATG 60.351 54.545 20.16 0.00 35.98 1.90
5167 5939 1.882623 GCCTAGGCGGTAGTACGTTAT 59.117 52.381 20.16 0.00 35.98 1.89
5168 5940 1.308998 GCCTAGGCGGTAGTACGTTA 58.691 55.000 20.16 0.00 35.98 3.18
5170 5942 3.833304 GCCTAGGCGGTAGTACGT 58.167 61.111 20.16 0.00 35.98 3.57
5270 6042 6.601613 TCACTTCAATTGGAAAGTGTACAACT 59.398 34.615 26.69 0.00 43.42 3.16
5297 6069 6.946583 TCGGGAGTGCTTTCATATACTACTAT 59.053 38.462 0.00 0.00 0.00 2.12
5303 6075 3.654414 CCTCGGGAGTGCTTTCATATAC 58.346 50.000 0.00 0.00 0.00 1.47
5304 6076 2.037251 GCCTCGGGAGTGCTTTCATATA 59.963 50.000 0.00 0.00 0.00 0.86
5305 6077 1.202698 GCCTCGGGAGTGCTTTCATAT 60.203 52.381 0.00 0.00 0.00 1.78
5306 6078 0.178068 GCCTCGGGAGTGCTTTCATA 59.822 55.000 0.00 0.00 0.00 2.15
5307 6079 1.078143 GCCTCGGGAGTGCTTTCAT 60.078 57.895 0.00 0.00 0.00 2.57
5308 6080 1.768684 AAGCCTCGGGAGTGCTTTCA 61.769 55.000 14.58 0.00 39.91 2.69
5309 6081 1.003233 AAGCCTCGGGAGTGCTTTC 60.003 57.895 14.58 0.00 39.91 2.62
5310 6082 1.302832 CAAGCCTCGGGAGTGCTTT 60.303 57.895 16.57 5.48 40.45 3.51
5311 6083 1.557269 ATCAAGCCTCGGGAGTGCTT 61.557 55.000 14.58 14.58 41.93 3.91
5312 6084 1.992277 ATCAAGCCTCGGGAGTGCT 60.992 57.895 6.03 6.03 36.82 4.40
5313 6085 1.817099 CATCAAGCCTCGGGAGTGC 60.817 63.158 0.00 0.00 0.00 4.40
5314 6086 1.153289 CCATCAAGCCTCGGGAGTG 60.153 63.158 0.00 0.00 0.00 3.51
5315 6087 3.036429 GCCATCAAGCCTCGGGAGT 62.036 63.158 0.00 0.00 0.00 3.85
5316 6088 2.203126 GCCATCAAGCCTCGGGAG 60.203 66.667 0.00 0.00 0.00 4.30
5317 6089 2.688666 AGCCATCAAGCCTCGGGA 60.689 61.111 0.00 0.00 0.00 5.14
5318 6090 2.203126 GAGCCATCAAGCCTCGGG 60.203 66.667 0.00 0.00 0.00 5.14
5319 6091 2.203126 GGAGCCATCAAGCCTCGG 60.203 66.667 0.00 0.00 0.00 4.63
5320 6092 2.203126 GGGAGCCATCAAGCCTCG 60.203 66.667 0.00 0.00 0.00 4.63
5321 6093 2.203126 CGGGAGCCATCAAGCCTC 60.203 66.667 0.00 0.00 0.00 4.70
5436 6211 2.746277 GTGAGGTCCGCGGCATTT 60.746 61.111 23.51 5.51 0.00 2.32
5462 6237 3.319198 GCTCGTCCAGGGGGTTGA 61.319 66.667 0.00 0.00 34.93 3.18
5519 6294 1.143401 GCCTTGACGTAGGGTAGGC 59.857 63.158 6.51 8.05 43.96 3.93
5584 6359 4.201990 GCAATCATCTTCGAATTCCAAGCT 60.202 41.667 7.85 0.00 0.00 3.74
5592 6367 5.543507 AGTAGGAGCAATCATCTTCGAAT 57.456 39.130 0.00 0.00 0.00 3.34
5781 6557 1.948104 CAACGTGGAAGTGGAAGACA 58.052 50.000 0.00 0.00 0.00 3.41
5880 6656 3.406595 ATGCGGTAAGGAGGGCAGC 62.407 63.158 0.00 0.00 39.00 5.25
5984 6760 1.211969 GAACGTAGCTGCGACCAGA 59.788 57.895 31.08 0.00 41.77 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.