Multiple sequence alignment - TraesCS2B01G401100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G401100 chr2B 100.000 3245 0 0 1 3245 569150968 569154212 0.000000e+00 5993.0
1 TraesCS2B01G401100 chr2B 95.059 1275 58 3 874 2143 756027957 756029231 0.000000e+00 2001.0
2 TraesCS2B01G401100 chr2B 94.914 1278 48 10 874 2143 98595477 98594209 0.000000e+00 1984.0
3 TraesCS2B01G401100 chr2B 95.770 591 22 1 2585 3175 128376252 128376839 0.000000e+00 950.0
4 TraesCS2B01G401100 chr2B 95.601 591 23 1 2585 3175 98593819 98593232 0.000000e+00 944.0
5 TraesCS2B01G401100 chr2B 95.262 591 25 1 2585 3175 612090946 612091533 0.000000e+00 933.0
6 TraesCS2B01G401100 chr2B 93.860 342 15 1 370 711 128375327 128375662 8.030000e-141 510.0
7 TraesCS2B01G401100 chr2B 96.610 177 6 0 1 177 128375156 128375332 8.800000e-76 294.0
8 TraesCS2B01G401100 chr2B 89.744 156 4 6 1992 2135 569152821 569152976 4.270000e-44 189.0
9 TraesCS2B01G401100 chr2B 94.309 123 7 0 2416 2538 756029487 756029609 4.270000e-44 189.0
10 TraesCS2B01G401100 chr2B 94.444 90 3 1 2244 2331 800258025 800258114 1.570000e-28 137.0
11 TraesCS2B01G401100 chr2B 95.455 66 3 0 820 885 98596731 98596666 4.430000e-19 106.0
12 TraesCS2B01G401100 chr3D 94.196 1275 51 6 874 2143 562672806 562671550 0.000000e+00 1923.0
13 TraesCS2B01G401100 chr2D 95.041 1210 56 2 880 2085 11376210 11375001 0.000000e+00 1899.0
14 TraesCS2B01G401100 chr2D 93.182 88 4 1 2244 2329 641001090 641001003 9.450000e-26 128.0
15 TraesCS2B01G401100 chr7B 94.915 1180 43 6 874 2049 610508413 610509579 0.000000e+00 1831.0
16 TraesCS2B01G401100 chr7B 87.784 352 29 8 380 730 610506418 610506756 1.810000e-107 399.0
17 TraesCS2B01G401100 chr7B 94.309 123 7 0 2416 2538 610527699 610527821 4.270000e-44 189.0
18 TraesCS2B01G401100 chr3B 96.603 942 27 3 874 1810 733422259 733421318 0.000000e+00 1557.0
19 TraesCS2B01G401100 chr3B 95.434 876 33 2 987 1859 438115468 438114597 0.000000e+00 1389.0
20 TraesCS2B01G401100 chr3B 95.431 591 24 1 2585 3175 733420404 733419817 0.000000e+00 939.0
21 TraesCS2B01G401100 chr3B 94.380 516 23 1 370 885 733423954 733423445 0.000000e+00 787.0
22 TraesCS2B01G401100 chr3B 96.928 293 9 0 2404 2696 528697230 528696938 2.910000e-135 492.0
23 TraesCS2B01G401100 chr3B 96.610 177 6 0 1 177 733424125 733423949 8.800000e-76 294.0
24 TraesCS2B01G401100 chr3B 93.846 130 6 2 874 1001 438115954 438115825 9.190000e-46 195.0
25 TraesCS2B01G401100 chr3B 93.496 123 8 0 2416 2538 438114060 438113938 1.990000e-42 183.0
26 TraesCS2B01G401100 chr3B 97.000 100 2 1 2318 2416 528704333 528704234 2.000000e-37 167.0
27 TraesCS2B01G401100 chr4B 92.688 971 43 9 874 1839 338360333 338359386 0.000000e+00 1375.0
28 TraesCS2B01G401100 chr4B 93.953 215 13 0 1835 2049 338333485 338333271 3.120000e-85 326.0
29 TraesCS2B01G401100 chr4B 89.952 209 18 3 1936 2143 338333329 338333123 1.920000e-67 267.0
30 TraesCS2B01G401100 chr4B 94.309 123 7 0 2416 2538 338332835 338332713 4.270000e-44 189.0
31 TraesCS2B01G401100 chr1A 90.714 980 87 4 881 1858 480261431 480260454 0.000000e+00 1303.0
32 TraesCS2B01G401100 chr1A 95.770 591 22 1 2585 3175 543484654 543485241 0.000000e+00 950.0
33 TraesCS2B01G401100 chr1A 93.567 342 16 1 370 711 543483609 543483944 3.740000e-139 505.0
34 TraesCS2B01G401100 chr1A 89.017 346 8 4 1810 2143 543483937 543484264 5.040000e-108 401.0
35 TraesCS2B01G401100 chr1A 87.059 340 19 12 2318 2632 480260020 480259681 8.560000e-96 361.0
36 TraesCS2B01G401100 chr1A 94.393 214 12 0 1796 2009 543484043 543484256 2.410000e-86 329.0
37 TraesCS2B01G401100 chr1A 96.610 177 6 0 1 177 543483438 543483614 8.800000e-76 294.0
38 TraesCS2B01G401100 chr1A 88.652 141 4 3 1992 2120 543483981 543484121 9.320000e-36 161.0
39 TraesCS2B01G401100 chr1B 95.770 591 22 1 2585 3175 439124613 439125200 0.000000e+00 950.0
40 TraesCS2B01G401100 chr1B 93.567 342 15 2 370 711 439123569 439123903 1.340000e-138 503.0
41 TraesCS2B01G401100 chr1B 93.925 214 13 0 1796 2009 439124002 439124215 1.120000e-84 324.0
42 TraesCS2B01G401100 chr1B 96.610 177 6 0 1 177 439123398 439123574 8.800000e-76 294.0
43 TraesCS2B01G401100 chr5A 95.608 592 22 2 2585 3175 365333378 365333966 0.000000e+00 946.0
44 TraesCS2B01G401100 chr5A 88.856 682 56 12 61 726 573608761 573608084 0.000000e+00 821.0
45 TraesCS2B01G401100 chr5A 93.567 342 16 1 370 711 365332330 365332665 3.740000e-139 505.0
46 TraesCS2B01G401100 chr5A 96.610 177 6 0 1 177 365332159 365332335 8.800000e-76 294.0
47 TraesCS2B01G401100 chr6B 95.431 591 24 1 2585 3175 678121181 678120594 0.000000e+00 939.0
48 TraesCS2B01G401100 chr6B 93.860 342 15 1 370 711 678122226 678121891 8.030000e-141 510.0
49 TraesCS2B01G401100 chr6B 94.393 214 12 0 1796 2009 678121792 678121579 2.410000e-86 329.0
50 TraesCS2B01G401100 chr6B 96.610 177 6 0 1 177 678122397 678122221 8.800000e-76 294.0
51 TraesCS2B01G401100 chrUn 94.380 516 23 1 370 885 409769029 409768520 0.000000e+00 787.0
52 TraesCS2B01G401100 chrUn 96.610 177 6 0 1 177 409769200 409769024 8.800000e-76 294.0
53 TraesCS2B01G401100 chr5B 88.156 667 49 11 61 724 555953129 555952490 0.000000e+00 767.0
54 TraesCS2B01G401100 chr5D 87.704 675 53 13 61 727 454311620 454310968 0.000000e+00 760.0
55 TraesCS2B01G401100 chr5D 91.549 284 19 2 2727 3010 565042495 565042217 1.410000e-103 387.0
56 TraesCS2B01G401100 chr2A 92.143 140 9 1 730 869 23697035 23697172 2.550000e-46 196.0
57 TraesCS2B01G401100 chr1D 92.982 57 3 1 3120 3175 365065705 365065761 7.460000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G401100 chr2B 569150968 569154212 3244 False 3091.000000 5993 94.872000 1 3245 2 chr2B.!!$F4 3244
1 TraesCS2B01G401100 chr2B 756027957 756029609 1652 False 1095.000000 2001 94.684000 874 2538 2 chr2B.!!$F5 1664
2 TraesCS2B01G401100 chr2B 98593232 98596731 3499 True 1011.333333 1984 95.323333 820 3175 3 chr2B.!!$R1 2355
3 TraesCS2B01G401100 chr2B 612090946 612091533 587 False 933.000000 933 95.262000 2585 3175 1 chr2B.!!$F1 590
4 TraesCS2B01G401100 chr2B 128375156 128376839 1683 False 584.666667 950 95.413333 1 3175 3 chr2B.!!$F3 3174
5 TraesCS2B01G401100 chr3D 562671550 562672806 1256 True 1923.000000 1923 94.196000 874 2143 1 chr3D.!!$R1 1269
6 TraesCS2B01G401100 chr2D 11375001 11376210 1209 True 1899.000000 1899 95.041000 880 2085 1 chr2D.!!$R1 1205
7 TraesCS2B01G401100 chr7B 610506418 610509579 3161 False 1115.000000 1831 91.349500 380 2049 2 chr7B.!!$F2 1669
8 TraesCS2B01G401100 chr3B 733419817 733424125 4308 True 894.250000 1557 95.756000 1 3175 4 chr3B.!!$R4 3174
9 TraesCS2B01G401100 chr3B 438113938 438115954 2016 True 589.000000 1389 94.258667 874 2538 3 chr3B.!!$R3 1664
10 TraesCS2B01G401100 chr4B 338359386 338360333 947 True 1375.000000 1375 92.688000 874 1839 1 chr4B.!!$R1 965
11 TraesCS2B01G401100 chr4B 338332713 338333485 772 True 260.666667 326 92.738000 1835 2538 3 chr4B.!!$R2 703
12 TraesCS2B01G401100 chr1A 480259681 480261431 1750 True 832.000000 1303 88.886500 881 2632 2 chr1A.!!$R1 1751
13 TraesCS2B01G401100 chr1A 543483438 543485241 1803 False 440.000000 950 93.001500 1 3175 6 chr1A.!!$F1 3174
14 TraesCS2B01G401100 chr1B 439123398 439125200 1802 False 517.750000 950 94.968000 1 3175 4 chr1B.!!$F1 3174
15 TraesCS2B01G401100 chr5A 573608084 573608761 677 True 821.000000 821 88.856000 61 726 1 chr5A.!!$R1 665
16 TraesCS2B01G401100 chr5A 365332159 365333966 1807 False 581.666667 946 95.261667 1 3175 3 chr5A.!!$F1 3174
17 TraesCS2B01G401100 chr6B 678120594 678122397 1803 True 518.000000 939 95.073500 1 3175 4 chr6B.!!$R1 3174
18 TraesCS2B01G401100 chrUn 409768520 409769200 680 True 540.500000 787 95.495000 1 885 2 chrUn.!!$R1 884
19 TraesCS2B01G401100 chr5B 555952490 555953129 639 True 767.000000 767 88.156000 61 724 1 chr5B.!!$R1 663
20 TraesCS2B01G401100 chr5D 454310968 454311620 652 True 760.000000 760 87.704000 61 727 1 chr5D.!!$R1 666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
239 456 0.106318 GCTGCCCCAGAATTCCTCAT 60.106 55.000 0.65 0.0 32.44 2.90 F
269 486 0.323999 TGGGCTCATCTGCAGCAATT 60.324 50.000 9.47 0.0 38.77 2.32 F
270 487 0.822164 GGGCTCATCTGCAGCAATTT 59.178 50.000 9.47 0.0 38.77 1.82 F
1524 3712 1.064314 AGGTCTCTCCAGTCGCATACT 60.064 52.381 0.00 0.0 39.81 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1405 3593 0.247185 TCTACGGCCCGTCGAAAAAT 59.753 50.0 14.44 0.00 41.54 1.82 R
2007 4525 0.247736 GAGGATGTTGCTGGTCGTCT 59.752 55.0 0.00 0.00 0.00 4.18 R
2010 4528 0.321564 TTGGAGGATGTTGCTGGTCG 60.322 55.0 0.00 0.00 0.00 4.79 R
2871 5794 0.318445 CTGCTCAAGTGGCACAAAGC 60.318 55.0 21.41 22.75 44.16 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.930019 AGGGGTGCAGCTGCTACA 60.930 61.111 36.61 16.83 42.66 2.74
112 113 1.533129 GGTTGCTCGCGTTTTTCTGTT 60.533 47.619 5.77 0.00 0.00 3.16
173 390 0.595095 GCCAGTTTCTTCAGGTGCAG 59.405 55.000 0.00 0.00 0.00 4.41
174 391 0.595095 CCAGTTTCTTCAGGTGCAGC 59.405 55.000 8.11 8.11 0.00 5.25
175 392 1.311859 CAGTTTCTTCAGGTGCAGCA 58.688 50.000 19.63 0.00 0.00 4.41
176 393 1.266175 CAGTTTCTTCAGGTGCAGCAG 59.734 52.381 19.63 10.74 0.00 4.24
177 394 0.595095 GTTTCTTCAGGTGCAGCAGG 59.405 55.000 19.63 9.97 0.00 4.85
178 395 0.538057 TTTCTTCAGGTGCAGCAGGG 60.538 55.000 19.63 7.28 0.00 4.45
179 396 3.060615 CTTCAGGTGCAGCAGGGC 61.061 66.667 19.63 0.00 0.00 5.19
180 397 4.666253 TTCAGGTGCAGCAGGGCC 62.666 66.667 19.63 0.00 0.00 5.80
182 399 4.753662 CAGGTGCAGCAGGGCCAT 62.754 66.667 19.63 0.00 0.00 4.40
183 400 4.437587 AGGTGCAGCAGGGCCATC 62.438 66.667 19.63 0.00 0.00 3.51
184 401 4.437587 GGTGCAGCAGGGCCATCT 62.438 66.667 11.86 0.00 0.00 2.90
185 402 2.362120 GTGCAGCAGGGCCATCTT 60.362 61.111 6.18 0.00 0.00 2.40
186 403 2.044650 TGCAGCAGGGCCATCTTC 60.045 61.111 6.18 0.00 0.00 2.87
187 404 2.044650 GCAGCAGGGCCATCTTCA 60.045 61.111 6.18 0.00 0.00 3.02
188 405 2.119655 GCAGCAGGGCCATCTTCAG 61.120 63.158 6.18 0.00 0.00 3.02
189 406 1.605992 CAGCAGGGCCATCTTCAGA 59.394 57.895 6.18 0.00 0.00 3.27
190 407 0.183014 CAGCAGGGCCATCTTCAGAT 59.817 55.000 6.18 0.00 34.56 2.90
191 408 0.924823 AGCAGGGCCATCTTCAGATT 59.075 50.000 6.18 0.00 31.21 2.40
192 409 1.287146 AGCAGGGCCATCTTCAGATTT 59.713 47.619 6.18 0.00 31.21 2.17
193 410 1.407979 GCAGGGCCATCTTCAGATTTG 59.592 52.381 6.18 0.00 31.21 2.32
194 411 2.731572 CAGGGCCATCTTCAGATTTGT 58.268 47.619 6.18 0.00 31.21 2.83
195 412 2.686915 CAGGGCCATCTTCAGATTTGTC 59.313 50.000 6.18 0.00 31.21 3.18
196 413 1.672881 GGGCCATCTTCAGATTTGTCG 59.327 52.381 4.39 0.00 31.21 4.35
197 414 2.359900 GGCCATCTTCAGATTTGTCGT 58.640 47.619 0.00 0.00 31.21 4.34
198 415 2.749621 GGCCATCTTCAGATTTGTCGTT 59.250 45.455 0.00 0.00 31.21 3.85
199 416 3.181506 GGCCATCTTCAGATTTGTCGTTC 60.182 47.826 0.00 0.00 31.21 3.95
200 417 3.686726 GCCATCTTCAGATTTGTCGTTCT 59.313 43.478 0.00 0.00 31.21 3.01
201 418 4.201763 GCCATCTTCAGATTTGTCGTTCTC 60.202 45.833 0.00 0.00 31.21 2.87
202 419 4.331168 CCATCTTCAGATTTGTCGTTCTCC 59.669 45.833 0.00 0.00 31.21 3.71
203 420 3.575630 TCTTCAGATTTGTCGTTCTCCG 58.424 45.455 0.00 0.00 38.13 4.63
204 421 3.254903 TCTTCAGATTTGTCGTTCTCCGA 59.745 43.478 0.00 0.00 45.00 4.55
205 422 7.551948 CATCTTCAGATTTGTCGTTCTCCGAA 61.552 42.308 0.00 0.00 39.04 4.30
206 423 9.444837 CATCTTCAGATTTGTCGTTCTCCGAAC 62.445 44.444 0.00 0.00 39.04 3.95
212 429 1.805254 TCGTTCTCCGAACCGATCC 59.195 57.895 1.54 0.00 44.03 3.36
213 430 0.679002 TCGTTCTCCGAACCGATCCT 60.679 55.000 1.54 0.00 44.03 3.24
214 431 0.172803 CGTTCTCCGAACCGATCCTT 59.827 55.000 1.54 0.00 39.56 3.36
215 432 1.403780 CGTTCTCCGAACCGATCCTTT 60.404 52.381 1.54 0.00 39.56 3.11
216 433 2.696506 GTTCTCCGAACCGATCCTTTT 58.303 47.619 0.00 0.00 0.00 2.27
217 434 2.380084 TCTCCGAACCGATCCTTTTG 57.620 50.000 0.00 0.00 0.00 2.44
218 435 1.897133 TCTCCGAACCGATCCTTTTGA 59.103 47.619 0.00 0.00 0.00 2.69
219 436 2.094182 TCTCCGAACCGATCCTTTTGAG 60.094 50.000 0.00 0.00 0.00 3.02
220 437 1.066430 TCCGAACCGATCCTTTTGAGG 60.066 52.381 0.00 0.00 0.00 3.86
221 438 0.727398 CGAACCGATCCTTTTGAGGC 59.273 55.000 0.00 0.00 0.00 4.70
222 439 1.676014 CGAACCGATCCTTTTGAGGCT 60.676 52.381 0.00 0.00 0.00 4.58
223 440 1.740025 GAACCGATCCTTTTGAGGCTG 59.260 52.381 0.00 0.00 0.00 4.85
224 441 0.678048 ACCGATCCTTTTGAGGCTGC 60.678 55.000 0.00 0.00 0.00 5.25
225 442 1.379642 CCGATCCTTTTGAGGCTGCC 61.380 60.000 11.65 11.65 0.00 4.85
226 443 1.379642 CGATCCTTTTGAGGCTGCCC 61.380 60.000 16.57 7.66 0.00 5.36
227 444 1.000866 ATCCTTTTGAGGCTGCCCC 59.999 57.895 16.57 3.45 0.00 5.80
228 445 1.803453 ATCCTTTTGAGGCTGCCCCA 61.803 55.000 16.57 7.01 35.39 4.96
229 446 1.980772 CCTTTTGAGGCTGCCCCAG 60.981 63.158 16.57 4.20 35.39 4.45
230 447 1.075482 CTTTTGAGGCTGCCCCAGA 59.925 57.895 16.57 1.16 32.44 3.86
231 448 0.540365 CTTTTGAGGCTGCCCCAGAA 60.540 55.000 16.57 10.67 32.44 3.02
232 449 0.114954 TTTTGAGGCTGCCCCAGAAT 59.885 50.000 16.57 0.00 32.44 2.40
233 450 0.114954 TTTGAGGCTGCCCCAGAATT 59.885 50.000 16.57 0.00 32.44 2.17
234 451 0.323725 TTGAGGCTGCCCCAGAATTC 60.324 55.000 16.57 4.90 32.44 2.17
235 452 1.454663 GAGGCTGCCCCAGAATTCC 60.455 63.158 16.57 0.00 32.44 3.01
236 453 1.931007 GAGGCTGCCCCAGAATTCCT 61.931 60.000 16.57 0.00 32.44 3.36
237 454 1.454663 GGCTGCCCCAGAATTCCTC 60.455 63.158 7.66 0.00 32.44 3.71
238 455 1.304282 GCTGCCCCAGAATTCCTCA 59.696 57.895 0.65 0.00 32.44 3.86
239 456 0.106318 GCTGCCCCAGAATTCCTCAT 60.106 55.000 0.65 0.00 32.44 2.90
240 457 1.978454 CTGCCCCAGAATTCCTCATC 58.022 55.000 0.65 0.00 32.44 2.92
241 458 0.552848 TGCCCCAGAATTCCTCATCC 59.447 55.000 0.65 0.00 0.00 3.51
242 459 0.849417 GCCCCAGAATTCCTCATCCT 59.151 55.000 0.65 0.00 0.00 3.24
243 460 1.202867 GCCCCAGAATTCCTCATCCTC 60.203 57.143 0.65 0.00 0.00 3.71
244 461 1.423161 CCCCAGAATTCCTCATCCTCC 59.577 57.143 0.65 0.00 0.00 4.30
245 462 2.416638 CCCAGAATTCCTCATCCTCCT 58.583 52.381 0.65 0.00 0.00 3.69
246 463 2.371510 CCCAGAATTCCTCATCCTCCTC 59.628 54.545 0.65 0.00 0.00 3.71
247 464 3.316501 CCAGAATTCCTCATCCTCCTCT 58.683 50.000 0.65 0.00 0.00 3.69
248 465 3.071312 CCAGAATTCCTCATCCTCCTCTG 59.929 52.174 0.65 0.00 0.00 3.35
249 466 2.705127 AGAATTCCTCATCCTCCTCTGC 59.295 50.000 0.65 0.00 0.00 4.26
250 467 2.493099 ATTCCTCATCCTCCTCTGCT 57.507 50.000 0.00 0.00 0.00 4.24
251 468 1.493861 TTCCTCATCCTCCTCTGCTG 58.506 55.000 0.00 0.00 0.00 4.41
252 469 0.398239 TCCTCATCCTCCTCTGCTGG 60.398 60.000 0.00 0.00 0.00 4.85
253 470 1.409251 CCTCATCCTCCTCTGCTGGG 61.409 65.000 0.00 0.00 0.00 4.45
254 471 2.042404 CTCATCCTCCTCTGCTGGGC 62.042 65.000 0.00 0.00 0.00 5.36
255 472 2.071262 CATCCTCCTCTGCTGGGCT 61.071 63.158 0.00 0.00 0.00 5.19
256 473 1.765657 ATCCTCCTCTGCTGGGCTC 60.766 63.158 0.00 0.00 0.00 4.70
257 474 2.542409 ATCCTCCTCTGCTGGGCTCA 62.542 60.000 0.00 0.00 0.00 4.26
258 475 2.071262 CCTCCTCTGCTGGGCTCAT 61.071 63.158 0.00 0.00 0.00 2.90
259 476 1.446791 CTCCTCTGCTGGGCTCATC 59.553 63.158 0.00 0.00 0.00 2.92
260 477 1.002662 TCCTCTGCTGGGCTCATCT 59.997 57.895 0.00 0.00 0.00 2.90
261 478 1.146485 CCTCTGCTGGGCTCATCTG 59.854 63.158 0.00 0.00 0.00 2.90
262 479 1.524165 CTCTGCTGGGCTCATCTGC 60.524 63.158 0.00 0.00 0.00 4.26
263 480 2.253403 CTCTGCTGGGCTCATCTGCA 62.253 60.000 0.00 0.00 37.48 4.41
264 481 1.820056 CTGCTGGGCTCATCTGCAG 60.820 63.158 11.46 11.46 45.60 4.41
265 482 3.210528 GCTGGGCTCATCTGCAGC 61.211 66.667 9.47 0.00 36.02 5.25
266 483 2.271173 CTGGGCTCATCTGCAGCA 59.729 61.111 9.47 0.00 38.77 4.41
267 484 1.378119 CTGGGCTCATCTGCAGCAA 60.378 57.895 9.47 0.00 38.77 3.91
268 485 0.752009 CTGGGCTCATCTGCAGCAAT 60.752 55.000 9.47 0.00 38.77 3.56
269 486 0.323999 TGGGCTCATCTGCAGCAATT 60.324 50.000 9.47 0.00 38.77 2.32
270 487 0.822164 GGGCTCATCTGCAGCAATTT 59.178 50.000 9.47 0.00 38.77 1.82
271 488 1.470979 GGGCTCATCTGCAGCAATTTG 60.471 52.381 9.47 1.63 38.77 2.32
272 489 1.475280 GGCTCATCTGCAGCAATTTGA 59.525 47.619 9.47 5.97 38.77 2.69
273 490 2.094390 GGCTCATCTGCAGCAATTTGAA 60.094 45.455 9.47 0.00 38.77 2.69
274 491 3.581755 GCTCATCTGCAGCAATTTGAAA 58.418 40.909 9.47 0.00 36.82 2.69
275 492 3.367025 GCTCATCTGCAGCAATTTGAAAC 59.633 43.478 9.47 0.00 36.82 2.78
276 493 4.552355 CTCATCTGCAGCAATTTGAAACA 58.448 39.130 9.47 0.00 0.00 2.83
277 494 5.142061 TCATCTGCAGCAATTTGAAACAT 57.858 34.783 9.47 0.00 0.00 2.71
278 495 4.926832 TCATCTGCAGCAATTTGAAACATG 59.073 37.500 9.47 3.03 0.00 3.21
279 496 4.325028 TCTGCAGCAATTTGAAACATGT 57.675 36.364 9.47 0.00 0.00 3.21
280 497 5.450592 TCTGCAGCAATTTGAAACATGTA 57.549 34.783 9.47 0.00 0.00 2.29
281 498 5.463286 TCTGCAGCAATTTGAAACATGTAG 58.537 37.500 9.47 0.35 0.00 2.74
282 499 5.009911 TCTGCAGCAATTTGAAACATGTAGT 59.990 36.000 9.47 0.00 0.00 2.73
283 500 6.206438 TCTGCAGCAATTTGAAACATGTAGTA 59.794 34.615 9.47 0.00 0.00 1.82
284 501 6.743110 TGCAGCAATTTGAAACATGTAGTAA 58.257 32.000 0.00 0.00 0.00 2.24
285 502 6.862608 TGCAGCAATTTGAAACATGTAGTAAG 59.137 34.615 0.00 0.00 0.00 2.34
286 503 7.083858 GCAGCAATTTGAAACATGTAGTAAGA 58.916 34.615 0.00 0.00 0.00 2.10
287 504 7.061094 GCAGCAATTTGAAACATGTAGTAAGAC 59.939 37.037 0.00 0.00 0.00 3.01
288 505 7.538678 CAGCAATTTGAAACATGTAGTAAGACC 59.461 37.037 0.00 0.00 0.00 3.85
289 506 7.230510 AGCAATTTGAAACATGTAGTAAGACCA 59.769 33.333 0.00 0.00 0.00 4.02
290 507 7.326063 GCAATTTGAAACATGTAGTAAGACCAC 59.674 37.037 0.00 0.00 0.00 4.16
291 508 8.567948 CAATTTGAAACATGTAGTAAGACCACT 58.432 33.333 0.00 0.00 0.00 4.00
292 509 7.724305 TTTGAAACATGTAGTAAGACCACTC 57.276 36.000 0.00 0.00 0.00 3.51
293 510 6.665992 TGAAACATGTAGTAAGACCACTCT 57.334 37.500 0.00 0.00 0.00 3.24
294 511 6.688578 TGAAACATGTAGTAAGACCACTCTC 58.311 40.000 0.00 0.00 0.00 3.20
295 512 5.662674 AACATGTAGTAAGACCACTCTCC 57.337 43.478 0.00 0.00 0.00 3.71
296 513 4.936802 ACATGTAGTAAGACCACTCTCCT 58.063 43.478 0.00 0.00 0.00 3.69
297 514 4.707448 ACATGTAGTAAGACCACTCTCCTG 59.293 45.833 0.00 0.00 0.00 3.86
298 515 3.698289 TGTAGTAAGACCACTCTCCTGG 58.302 50.000 0.00 0.00 37.33 4.45
299 516 3.332783 TGTAGTAAGACCACTCTCCTGGA 59.667 47.826 0.00 0.00 35.04 3.86
300 517 3.544698 AGTAAGACCACTCTCCTGGAA 57.455 47.619 0.00 0.00 35.04 3.53
301 518 4.067944 AGTAAGACCACTCTCCTGGAAT 57.932 45.455 0.00 0.00 35.04 3.01
302 519 3.772025 AGTAAGACCACTCTCCTGGAATG 59.228 47.826 0.00 0.00 35.04 2.67
303 520 2.334006 AGACCACTCTCCTGGAATGT 57.666 50.000 0.00 0.00 35.04 2.71
304 521 3.474798 AGACCACTCTCCTGGAATGTA 57.525 47.619 0.00 0.00 35.04 2.29
305 522 4.000928 AGACCACTCTCCTGGAATGTAT 57.999 45.455 0.00 0.00 35.04 2.29
306 523 3.964031 AGACCACTCTCCTGGAATGTATC 59.036 47.826 0.00 1.83 35.04 2.24
307 524 2.695666 ACCACTCTCCTGGAATGTATCG 59.304 50.000 0.00 0.00 35.04 2.92
308 525 2.959030 CCACTCTCCTGGAATGTATCGA 59.041 50.000 0.00 0.00 32.30 3.59
309 526 3.243569 CCACTCTCCTGGAATGTATCGAC 60.244 52.174 0.00 0.00 32.30 4.20
310 527 3.381590 CACTCTCCTGGAATGTATCGACA 59.618 47.826 0.00 0.00 40.72 4.35
311 528 3.381908 ACTCTCCTGGAATGTATCGACAC 59.618 47.826 0.00 0.00 38.76 3.67
312 529 3.361786 TCTCCTGGAATGTATCGACACA 58.638 45.455 0.00 0.00 38.76 3.72
313 530 3.767131 TCTCCTGGAATGTATCGACACAA 59.233 43.478 0.00 0.00 38.76 3.33
314 531 3.857052 TCCTGGAATGTATCGACACAAC 58.143 45.455 0.00 0.00 38.76 3.32
315 532 3.259625 TCCTGGAATGTATCGACACAACA 59.740 43.478 0.00 0.00 38.76 3.33
316 533 3.370978 CCTGGAATGTATCGACACAACAC 59.629 47.826 0.00 0.00 38.76 3.32
317 534 4.245660 CTGGAATGTATCGACACAACACT 58.754 43.478 0.00 0.00 38.76 3.55
318 535 3.993736 TGGAATGTATCGACACAACACTG 59.006 43.478 0.00 0.00 38.76 3.66
319 536 4.242475 GGAATGTATCGACACAACACTGA 58.758 43.478 0.00 0.00 38.76 3.41
320 537 4.327357 GGAATGTATCGACACAACACTGAG 59.673 45.833 0.00 0.00 38.76 3.35
321 538 4.783764 ATGTATCGACACAACACTGAGA 57.216 40.909 0.00 0.00 38.76 3.27
322 539 4.783764 TGTATCGACACAACACTGAGAT 57.216 40.909 0.00 0.00 0.00 2.75
323 540 4.485163 TGTATCGACACAACACTGAGATG 58.515 43.478 0.00 0.00 0.00 2.90
324 541 3.667497 ATCGACACAACACTGAGATGT 57.333 42.857 0.00 0.00 32.92 3.06
325 542 3.013276 TCGACACAACACTGAGATGTC 57.987 47.619 0.00 0.00 37.02 3.06
327 544 2.743938 GACACAACACTGAGATGTCGT 58.256 47.619 0.00 0.00 29.85 4.34
328 545 2.726760 GACACAACACTGAGATGTCGTC 59.273 50.000 0.00 0.00 29.85 4.20
329 546 2.362397 ACACAACACTGAGATGTCGTCT 59.638 45.455 0.00 0.00 40.81 4.18
330 547 3.568430 ACACAACACTGAGATGTCGTCTA 59.432 43.478 0.00 0.00 37.29 2.59
331 548 4.037565 ACACAACACTGAGATGTCGTCTAA 59.962 41.667 0.00 0.00 37.29 2.10
332 549 5.164233 CACAACACTGAGATGTCGTCTAAT 58.836 41.667 0.00 0.00 37.29 1.73
333 550 5.635280 CACAACACTGAGATGTCGTCTAATT 59.365 40.000 0.00 0.00 37.29 1.40
334 551 6.146184 CACAACACTGAGATGTCGTCTAATTT 59.854 38.462 0.00 0.00 37.29 1.82
335 552 6.706270 ACAACACTGAGATGTCGTCTAATTTT 59.294 34.615 0.00 0.00 37.29 1.82
336 553 7.226720 ACAACACTGAGATGTCGTCTAATTTTT 59.773 33.333 0.00 0.00 37.29 1.94
337 554 7.121974 ACACTGAGATGTCGTCTAATTTTTG 57.878 36.000 0.00 0.00 37.29 2.44
338 555 6.706270 ACACTGAGATGTCGTCTAATTTTTGT 59.294 34.615 0.00 0.00 37.29 2.83
339 556 7.095607 ACACTGAGATGTCGTCTAATTTTTGTC 60.096 37.037 0.00 0.00 37.29 3.18
340 557 7.116948 CACTGAGATGTCGTCTAATTTTTGTCT 59.883 37.037 0.00 0.00 37.29 3.41
341 558 7.116948 ACTGAGATGTCGTCTAATTTTTGTCTG 59.883 37.037 0.00 0.00 37.29 3.51
342 559 7.151976 TGAGATGTCGTCTAATTTTTGTCTGA 58.848 34.615 0.00 0.00 37.29 3.27
343 560 7.655732 TGAGATGTCGTCTAATTTTTGTCTGAA 59.344 33.333 0.00 0.00 37.29 3.02
344 561 8.553459 AGATGTCGTCTAATTTTTGTCTGAAT 57.447 30.769 0.00 0.00 34.69 2.57
345 562 8.660373 AGATGTCGTCTAATTTTTGTCTGAATC 58.340 33.333 0.00 0.00 34.69 2.52
346 563 7.722795 TGTCGTCTAATTTTTGTCTGAATCA 57.277 32.000 0.00 0.00 0.00 2.57
347 564 8.322906 TGTCGTCTAATTTTTGTCTGAATCAT 57.677 30.769 0.00 0.00 0.00 2.45
348 565 9.430623 TGTCGTCTAATTTTTGTCTGAATCATA 57.569 29.630 0.00 0.00 0.00 2.15
359 576 7.734924 TTGTCTGAATCATATTGTAGGATGC 57.265 36.000 0.00 0.00 0.00 3.91
360 577 7.071069 TGTCTGAATCATATTGTAGGATGCT 57.929 36.000 0.00 0.00 0.00 3.79
361 578 7.512130 TGTCTGAATCATATTGTAGGATGCTT 58.488 34.615 0.00 0.00 0.00 3.91
362 579 8.650490 TGTCTGAATCATATTGTAGGATGCTTA 58.350 33.333 0.00 0.00 0.00 3.09
363 580 8.930760 GTCTGAATCATATTGTAGGATGCTTAC 58.069 37.037 0.00 0.00 0.00 2.34
364 581 8.097038 TCTGAATCATATTGTAGGATGCTTACC 58.903 37.037 0.00 0.00 0.00 2.85
365 582 7.977818 TGAATCATATTGTAGGATGCTTACCT 58.022 34.615 0.00 0.00 41.05 3.08
366 583 8.439971 TGAATCATATTGTAGGATGCTTACCTT 58.560 33.333 0.00 0.00 38.76 3.50
367 584 9.944376 GAATCATATTGTAGGATGCTTACCTTA 57.056 33.333 0.00 0.00 38.76 2.69
369 586 9.726438 ATCATATTGTAGGATGCTTACCTTAAC 57.274 33.333 0.00 0.00 38.76 2.01
370 587 8.710239 TCATATTGTAGGATGCTTACCTTAACA 58.290 33.333 0.00 0.00 38.76 2.41
378 595 6.058183 GGATGCTTACCTTAACATCAGTGAT 58.942 40.000 0.00 0.00 40.53 3.06
421 638 4.827835 AGGAAGCTTTTAAACTCCTGGAAC 59.172 41.667 0.00 0.00 0.00 3.62
441 658 3.775654 CTCCTCTGTGGGGCGGTC 61.776 72.222 0.00 0.00 36.20 4.79
482 699 5.582689 AATAGCCTGCCAACAATAAAGTC 57.417 39.130 0.00 0.00 0.00 3.01
609 834 1.382420 CAGCAGAGGTAGCTCCCCT 60.382 63.158 18.14 11.59 41.14 4.79
825 1051 5.748592 CCCACGTATAAGAAATTAGCAAGC 58.251 41.667 0.00 0.00 0.00 4.01
978 2792 1.615124 TCCCTGGCCTCATTTCCGA 60.615 57.895 3.32 0.00 0.00 4.55
985 2799 3.541632 TGGCCTCATTTCCGAGAATTAC 58.458 45.455 3.32 0.00 34.79 1.89
1173 3358 1.214367 GTGTCGTCACGTTTGATGGT 58.786 50.000 0.00 0.00 39.03 3.55
1305 3493 6.266786 TGAGGTTCTGTATGTGTGAGAAACTA 59.733 38.462 0.00 0.00 42.55 2.24
1323 3511 7.753630 AGAAACTAATTCCAGCTATCCATGAT 58.246 34.615 0.00 0.00 38.94 2.45
1405 3593 3.066900 GCATCTTAAGCCTAGTGACGAGA 59.933 47.826 0.00 0.00 0.00 4.04
1458 3646 5.314718 TGGATATCAAGTTGATCCAGCAT 57.685 39.130 21.49 9.49 43.34 3.79
1524 3712 1.064314 AGGTCTCTCCAGTCGCATACT 60.064 52.381 0.00 0.00 39.81 2.12
1820 4015 1.081641 CAGCAGCACCTTTGAAGCG 60.082 57.895 0.00 0.00 0.00 4.68
1957 4475 4.388469 CGAAGCAGAGAAAGAGAAAGAAGG 59.612 45.833 0.00 0.00 0.00 3.46
1993 4511 4.342092 TCCAAGCAAAGAAAGGGAAAGAAG 59.658 41.667 0.00 0.00 0.00 2.85
1994 4512 4.053983 CAAGCAAAGAAAGGGAAAGAAGC 58.946 43.478 0.00 0.00 0.00 3.86
1995 4513 3.299503 AGCAAAGAAAGGGAAAGAAGCA 58.700 40.909 0.00 0.00 0.00 3.91
1996 4514 3.320256 AGCAAAGAAAGGGAAAGAAGCAG 59.680 43.478 0.00 0.00 0.00 4.24
1997 4515 3.319122 GCAAAGAAAGGGAAAGAAGCAGA 59.681 43.478 0.00 0.00 0.00 4.26
1998 4516 4.558296 GCAAAGAAAGGGAAAGAAGCAGAG 60.558 45.833 0.00 0.00 0.00 3.35
1999 4517 4.713792 AAGAAAGGGAAAGAAGCAGAGA 57.286 40.909 0.00 0.00 0.00 3.10
2000 4518 4.713792 AGAAAGGGAAAGAAGCAGAGAA 57.286 40.909 0.00 0.00 0.00 2.87
2001 4519 5.053978 AGAAAGGGAAAGAAGCAGAGAAA 57.946 39.130 0.00 0.00 0.00 2.52
2002 4520 5.069318 AGAAAGGGAAAGAAGCAGAGAAAG 58.931 41.667 0.00 0.00 0.00 2.62
2003 4521 3.431673 AGGGAAAGAAGCAGAGAAAGG 57.568 47.619 0.00 0.00 0.00 3.11
2004 4522 2.040947 AGGGAAAGAAGCAGAGAAAGGG 59.959 50.000 0.00 0.00 0.00 3.95
2005 4523 2.040412 GGGAAAGAAGCAGAGAAAGGGA 59.960 50.000 0.00 0.00 0.00 4.20
2006 4524 3.498661 GGGAAAGAAGCAGAGAAAGGGAA 60.499 47.826 0.00 0.00 0.00 3.97
2007 4525 4.145052 GGAAAGAAGCAGAGAAAGGGAAA 58.855 43.478 0.00 0.00 0.00 3.13
2008 4526 4.217334 GGAAAGAAGCAGAGAAAGGGAAAG 59.783 45.833 0.00 0.00 0.00 2.62
2009 4527 4.713792 AAGAAGCAGAGAAAGGGAAAGA 57.286 40.909 0.00 0.00 0.00 2.52
2010 4528 4.014569 AGAAGCAGAGAAAGGGAAAGAC 57.985 45.455 0.00 0.00 0.00 3.01
2143 4865 5.256474 CAGAGAAAGGGAAAGGAGCAATTA 58.744 41.667 0.00 0.00 0.00 1.40
2145 4867 4.998051 AGAAAGGGAAAGGAGCAATTACA 58.002 39.130 0.00 0.00 0.00 2.41
2148 4870 4.322057 AGGGAAAGGAGCAATTACATGT 57.678 40.909 2.69 2.69 0.00 3.21
2149 4871 4.273318 AGGGAAAGGAGCAATTACATGTC 58.727 43.478 0.00 0.00 0.00 3.06
2150 4872 4.016444 GGGAAAGGAGCAATTACATGTCA 58.984 43.478 0.00 0.00 0.00 3.58
2151 4873 4.646492 GGGAAAGGAGCAATTACATGTCAT 59.354 41.667 0.00 0.00 0.00 3.06
2152 4874 5.127682 GGGAAAGGAGCAATTACATGTCATT 59.872 40.000 0.00 0.00 0.00 2.57
2155 4877 7.603784 GGAAAGGAGCAATTACATGTCATTTTT 59.396 33.333 0.00 0.32 0.00 1.94
2188 5004 8.974060 AATGTCAGTAAAGGAAAGAAGTAACA 57.026 30.769 0.00 0.00 0.00 2.41
2189 5005 8.608844 ATGTCAGTAAAGGAAAGAAGTAACAG 57.391 34.615 0.00 0.00 0.00 3.16
2193 5009 5.998363 AGTAAAGGAAAGAAGTAACAGGCAG 59.002 40.000 0.00 0.00 0.00 4.85
2196 5028 5.248380 AGGAAAGAAGTAACAGGCAGAAT 57.752 39.130 0.00 0.00 0.00 2.40
2198 5030 5.707764 AGGAAAGAAGTAACAGGCAGAATTC 59.292 40.000 0.00 0.00 0.00 2.17
2199 5031 5.106118 GGAAAGAAGTAACAGGCAGAATTCC 60.106 44.000 0.65 0.00 0.00 3.01
2200 5032 4.640771 AGAAGTAACAGGCAGAATTCCA 57.359 40.909 0.65 0.00 0.00 3.53
2201 5033 4.985538 AGAAGTAACAGGCAGAATTCCAA 58.014 39.130 0.65 0.00 0.00 3.53
2202 5034 5.385198 AGAAGTAACAGGCAGAATTCCAAA 58.615 37.500 0.65 0.00 0.00 3.28
2203 5035 6.012745 AGAAGTAACAGGCAGAATTCCAAAT 58.987 36.000 0.65 0.00 0.00 2.32
2204 5036 5.904362 AGTAACAGGCAGAATTCCAAATC 57.096 39.130 0.65 0.00 0.00 2.17
2208 5040 5.549742 ACAGGCAGAATTCCAAATCAAAA 57.450 34.783 0.65 0.00 0.00 2.44
2210 5042 6.536447 ACAGGCAGAATTCCAAATCAAAATT 58.464 32.000 0.65 0.00 0.00 1.82
2211 5043 6.428771 ACAGGCAGAATTCCAAATCAAAATTG 59.571 34.615 0.65 0.00 0.00 2.32
2213 5045 6.652062 AGGCAGAATTCCAAATCAAAATTGAC 59.348 34.615 0.65 0.00 40.49 3.18
2216 5048 5.639082 AGAATTCCAAATCAAAATTGACCGC 59.361 36.000 0.65 0.00 40.49 5.68
2217 5049 4.599047 TTCCAAATCAAAATTGACCGCT 57.401 36.364 0.00 0.00 40.49 5.52
2218 5050 3.911868 TCCAAATCAAAATTGACCGCTG 58.088 40.909 0.00 0.00 40.49 5.18
2219 5051 3.571828 TCCAAATCAAAATTGACCGCTGA 59.428 39.130 0.00 0.00 40.49 4.26
2220 5052 3.674753 CCAAATCAAAATTGACCGCTGAC 59.325 43.478 0.00 0.00 40.49 3.51
2221 5053 3.575965 AATCAAAATTGACCGCTGACC 57.424 42.857 0.00 0.00 40.49 4.02
2222 5054 0.871722 TCAAAATTGACCGCTGACCG 59.128 50.000 0.00 0.00 31.01 4.79
2223 5055 0.871722 CAAAATTGACCGCTGACCGA 59.128 50.000 0.00 0.00 40.02 4.69
2224 5056 1.135972 CAAAATTGACCGCTGACCGAG 60.136 52.381 0.00 0.00 40.02 4.63
2225 5057 0.034896 AAATTGACCGCTGACCGAGT 59.965 50.000 0.00 0.00 40.02 4.18
2226 5058 0.034896 AATTGACCGCTGACCGAGTT 59.965 50.000 0.00 0.00 40.02 3.01
2227 5059 0.389948 ATTGACCGCTGACCGAGTTC 60.390 55.000 0.00 0.00 40.02 3.01
2236 5116 2.353208 GCTGACCGAGTTCATCTCTGTT 60.353 50.000 0.00 0.00 39.94 3.16
2238 5118 3.653344 TGACCGAGTTCATCTCTGTTTG 58.347 45.455 0.00 0.00 39.94 2.93
2239 5119 3.069586 TGACCGAGTTCATCTCTGTTTGT 59.930 43.478 0.00 0.00 39.94 2.83
2242 5122 4.281182 ACCGAGTTCATCTCTGTTTGTACT 59.719 41.667 0.00 0.00 37.33 2.73
2244 5124 6.015688 ACCGAGTTCATCTCTGTTTGTACTAA 60.016 38.462 0.00 0.00 37.33 2.24
2246 5126 7.221067 CCGAGTTCATCTCTGTTTGTACTAATC 59.779 40.741 0.00 0.00 40.75 1.75
2247 5127 7.755373 CGAGTTCATCTCTGTTTGTACTAATCA 59.245 37.037 0.00 0.00 40.75 2.57
2248 5128 9.424319 GAGTTCATCTCTGTTTGTACTAATCAA 57.576 33.333 0.00 0.00 39.86 2.57
2251 5131 9.942850 TTCATCTCTGTTTGTACTAATCAATCA 57.057 29.630 0.00 0.00 0.00 2.57
2252 5132 9.942850 TCATCTCTGTTTGTACTAATCAATCAA 57.057 29.630 0.00 0.00 0.00 2.57
2259 5139 9.190858 TGTTTGTACTAATCAATCAAAACATGC 57.809 29.630 0.00 0.00 31.45 4.06
2261 5141 8.969121 TTGTACTAATCAATCAAAACATGCAG 57.031 30.769 0.00 0.00 0.00 4.41
2265 5145 7.759465 ACTAATCAATCAAAACATGCAGAGAG 58.241 34.615 0.00 0.00 0.00 3.20
2266 5146 5.578005 ATCAATCAAAACATGCAGAGAGG 57.422 39.130 0.00 0.00 0.00 3.69
2267 5147 4.654915 TCAATCAAAACATGCAGAGAGGA 58.345 39.130 0.00 0.00 0.00 3.71
2268 5148 4.456911 TCAATCAAAACATGCAGAGAGGAC 59.543 41.667 0.00 0.00 0.00 3.85
2270 5150 3.668447 TCAAAACATGCAGAGAGGACTC 58.332 45.455 0.00 0.00 42.90 3.36
2282 5162 2.582052 AGAGGACTCTCCATCGATCAC 58.418 52.381 0.00 0.00 39.61 3.06
2283 5163 2.174639 AGAGGACTCTCCATCGATCACT 59.825 50.000 0.00 0.00 39.61 3.41
2284 5164 2.955660 GAGGACTCTCCATCGATCACTT 59.044 50.000 0.00 0.00 39.61 3.16
2285 5165 2.692557 AGGACTCTCCATCGATCACTTG 59.307 50.000 0.00 0.00 39.61 3.16
2286 5166 2.468831 GACTCTCCATCGATCACTTGC 58.531 52.381 0.00 0.00 0.00 4.01
2287 5167 2.100584 GACTCTCCATCGATCACTTGCT 59.899 50.000 0.00 0.00 0.00 3.91
2288 5168 3.291584 ACTCTCCATCGATCACTTGCTA 58.708 45.455 0.00 0.00 0.00 3.49
2290 5170 2.035193 TCTCCATCGATCACTTGCTAGC 59.965 50.000 8.10 8.10 0.00 3.42
2291 5171 2.034878 TCCATCGATCACTTGCTAGCT 58.965 47.619 17.23 0.00 0.00 3.32
2292 5172 2.133553 CCATCGATCACTTGCTAGCTG 58.866 52.381 17.23 11.26 0.00 4.24
2293 5173 1.526041 CATCGATCACTTGCTAGCTGC 59.474 52.381 17.23 0.00 43.25 5.25
2294 5174 0.820226 TCGATCACTTGCTAGCTGCT 59.180 50.000 17.23 7.57 43.37 4.24
2295 5175 1.202348 TCGATCACTTGCTAGCTGCTC 60.202 52.381 17.23 6.27 43.37 4.26
2296 5176 1.470458 CGATCACTTGCTAGCTGCTCA 60.470 52.381 17.23 0.00 43.37 4.26
2297 5177 1.932511 GATCACTTGCTAGCTGCTCAC 59.067 52.381 17.23 0.00 43.37 3.51
2298 5178 0.681175 TCACTTGCTAGCTGCTCACA 59.319 50.000 17.23 2.43 43.37 3.58
2300 5180 0.683973 ACTTGCTAGCTGCTCACAGT 59.316 50.000 17.23 1.47 46.30 3.55
2301 5181 1.071385 ACTTGCTAGCTGCTCACAGTT 59.929 47.619 17.23 0.00 46.30 3.16
2302 5182 2.300152 ACTTGCTAGCTGCTCACAGTTA 59.700 45.455 17.23 0.00 46.30 2.24
2303 5183 3.244215 ACTTGCTAGCTGCTCACAGTTAA 60.244 43.478 17.23 0.00 46.30 2.01
2304 5184 2.688507 TGCTAGCTGCTCACAGTTAAC 58.311 47.619 17.23 0.00 46.30 2.01
2305 5185 2.300152 TGCTAGCTGCTCACAGTTAACT 59.700 45.455 17.23 1.12 46.30 2.24
2306 5186 2.670414 GCTAGCTGCTCACAGTTAACTG 59.330 50.000 29.76 29.76 46.30 3.16
2307 5187 3.615110 GCTAGCTGCTCACAGTTAACTGA 60.615 47.826 36.14 18.01 46.30 3.41
2308 5188 3.475566 AGCTGCTCACAGTTAACTGAA 57.524 42.857 36.14 23.39 46.59 3.02
2309 5189 3.134458 AGCTGCTCACAGTTAACTGAAC 58.866 45.455 36.14 22.63 46.59 3.18
2310 5190 2.872245 GCTGCTCACAGTTAACTGAACA 59.128 45.455 36.14 25.16 46.59 3.18
2311 5191 3.499918 GCTGCTCACAGTTAACTGAACAT 59.500 43.478 36.14 15.56 46.59 2.71
2312 5192 4.612259 GCTGCTCACAGTTAACTGAACATG 60.612 45.833 36.14 24.79 46.59 3.21
2313 5193 4.702831 TGCTCACAGTTAACTGAACATGA 58.297 39.130 36.14 27.01 46.59 3.07
2314 5194 5.122519 TGCTCACAGTTAACTGAACATGAA 58.877 37.500 36.14 15.71 46.59 2.57
2315 5195 5.588246 TGCTCACAGTTAACTGAACATGAAA 59.412 36.000 36.14 18.80 46.59 2.69
2316 5196 6.094742 TGCTCACAGTTAACTGAACATGAAAA 59.905 34.615 36.14 18.52 46.59 2.29
2317 5197 7.141363 GCTCACAGTTAACTGAACATGAAAAT 58.859 34.615 36.14 11.73 46.59 1.82
2318 5198 8.289618 GCTCACAGTTAACTGAACATGAAAATA 58.710 33.333 36.14 11.06 46.59 1.40
2319 5199 9.599322 CTCACAGTTAACTGAACATGAAAATAC 57.401 33.333 36.14 0.00 46.59 1.89
2320 5200 9.337396 TCACAGTTAACTGAACATGAAAATACT 57.663 29.630 36.14 10.64 46.59 2.12
2328 5208 8.006298 ACTGAACATGAAAATACTGAACCAAA 57.994 30.769 0.00 0.00 0.00 3.28
2347 5227 5.003804 CCAAACATGCTACTCCTAGTGTTT 58.996 41.667 0.00 0.00 39.53 2.83
2366 5246 4.393990 TGTTTCAAGCTCATCATGCTACTG 59.606 41.667 0.00 0.00 40.22 2.74
2476 5375 6.413892 TCAGTGGTAAGATGCATGACATTAA 58.586 36.000 2.46 0.00 39.84 1.40
2620 5543 5.627499 TGCTTCAGGTAATTGACATTGTC 57.373 39.130 9.93 9.93 0.00 3.18
2624 5547 6.294176 GCTTCAGGTAATTGACATTGTCTTGT 60.294 38.462 17.26 5.37 33.15 3.16
2802 5725 0.587285 CTTATCCTCTCGGACGTCGG 59.413 60.000 16.37 16.37 43.51 4.79
2818 5741 2.804856 GGCACGCAGTTGTTGGTT 59.195 55.556 0.00 0.00 41.61 3.67
2820 5743 1.138671 GCACGCAGTTGTTGGTTGT 59.861 52.632 0.00 0.00 41.61 3.32
2871 5794 2.509336 CACGCCAAGGTAGCTCGG 60.509 66.667 0.00 0.00 0.00 4.63
2928 5852 8.465999 AGAGAAATAAACAAACACACATGTCAA 58.534 29.630 0.00 0.00 38.45 3.18
2935 5859 1.021202 ACACACATGTCAAACCACCG 58.979 50.000 0.00 0.00 31.55 4.94
2957 5881 8.082242 CACCGGAAAAGAAGAAATTCAGTTAAT 58.918 33.333 9.46 0.00 0.00 1.40
2960 5884 9.463443 CGGAAAAGAAGAAATTCAGTTAATTGT 57.537 29.630 0.00 0.00 37.85 2.71
3113 6090 2.322355 TTCTGAAGATGCAGCCTAGC 57.678 50.000 0.00 0.00 35.86 3.42
3122 6099 2.418083 GCAGCCTAGCGCCCAAATT 61.418 57.895 2.29 0.00 38.78 1.82
3166 6143 4.459973 CGATCTCAAGTCGCACGT 57.540 55.556 0.00 0.00 31.85 4.49
3200 6177 7.659652 AAAAAGACTAATGCAGACTACAGAC 57.340 36.000 0.00 0.00 0.00 3.51
3201 6178 6.597832 AAAGACTAATGCAGACTACAGACT 57.402 37.500 0.00 0.00 0.00 3.24
3202 6179 7.704578 AAAGACTAATGCAGACTACAGACTA 57.295 36.000 0.00 0.00 0.00 2.59
3203 6180 6.687081 AGACTAATGCAGACTACAGACTAC 57.313 41.667 0.00 0.00 0.00 2.73
3204 6181 6.181190 AGACTAATGCAGACTACAGACTACA 58.819 40.000 0.00 0.00 0.00 2.74
3205 6182 6.317642 AGACTAATGCAGACTACAGACTACAG 59.682 42.308 0.00 0.00 0.00 2.74
3206 6183 6.181190 ACTAATGCAGACTACAGACTACAGA 58.819 40.000 0.00 0.00 0.00 3.41
3207 6184 4.974368 ATGCAGACTACAGACTACAGAC 57.026 45.455 0.00 0.00 0.00 3.51
3208 6185 4.022413 TGCAGACTACAGACTACAGACT 57.978 45.455 0.00 0.00 0.00 3.24
3209 6186 5.161943 TGCAGACTACAGACTACAGACTA 57.838 43.478 0.00 0.00 0.00 2.59
3210 6187 5.557866 TGCAGACTACAGACTACAGACTAA 58.442 41.667 0.00 0.00 0.00 2.24
3211 6188 6.181190 TGCAGACTACAGACTACAGACTAAT 58.819 40.000 0.00 0.00 0.00 1.73
3212 6189 6.094186 TGCAGACTACAGACTACAGACTAATG 59.906 42.308 0.00 0.00 0.00 1.90
3213 6190 6.491394 CAGACTACAGACTACAGACTAATGC 58.509 44.000 0.00 0.00 0.00 3.56
3214 6191 6.094186 CAGACTACAGACTACAGACTAATGCA 59.906 42.308 0.00 0.00 0.00 3.96
3215 6192 6.659668 AGACTACAGACTACAGACTAATGCAA 59.340 38.462 0.00 0.00 0.00 4.08
3216 6193 6.857956 ACTACAGACTACAGACTAATGCAAG 58.142 40.000 0.00 0.00 0.00 4.01
3217 6194 4.499183 ACAGACTACAGACTAATGCAAGC 58.501 43.478 0.00 0.00 0.00 4.01
3218 6195 3.549471 CAGACTACAGACTAATGCAAGCG 59.451 47.826 0.00 0.00 0.00 4.68
3219 6196 2.860735 GACTACAGACTAATGCAAGCGG 59.139 50.000 0.00 0.00 0.00 5.52
3220 6197 2.205074 CTACAGACTAATGCAAGCGGG 58.795 52.381 0.00 0.00 0.00 6.13
3221 6198 0.613260 ACAGACTAATGCAAGCGGGA 59.387 50.000 0.00 0.00 0.00 5.14
3222 6199 1.210478 ACAGACTAATGCAAGCGGGAT 59.790 47.619 0.00 0.00 0.00 3.85
3223 6200 2.292267 CAGACTAATGCAAGCGGGATT 58.708 47.619 0.00 3.91 40.92 3.01
3224 6201 2.684881 CAGACTAATGCAAGCGGGATTT 59.315 45.455 0.00 0.00 38.60 2.17
3225 6202 2.684881 AGACTAATGCAAGCGGGATTTG 59.315 45.455 0.00 4.92 38.60 2.32
3226 6203 2.423538 GACTAATGCAAGCGGGATTTGT 59.576 45.455 10.84 10.84 43.52 2.83
3227 6204 3.616219 ACTAATGCAAGCGGGATTTGTA 58.384 40.909 9.77 0.00 40.33 2.41
3228 6205 2.939460 AATGCAAGCGGGATTTGTAC 57.061 45.000 0.00 0.00 33.19 2.90
3229 6206 1.832883 ATGCAAGCGGGATTTGTACA 58.167 45.000 0.00 0.00 0.00 2.90
3230 6207 1.164411 TGCAAGCGGGATTTGTACAG 58.836 50.000 0.00 0.00 0.00 2.74
3231 6208 1.271108 TGCAAGCGGGATTTGTACAGA 60.271 47.619 0.00 0.00 0.00 3.41
3232 6209 1.130561 GCAAGCGGGATTTGTACAGAC 59.869 52.381 0.00 0.00 0.00 3.51
3233 6210 2.699954 CAAGCGGGATTTGTACAGACT 58.300 47.619 0.00 0.00 0.00 3.24
3234 6211 3.857052 CAAGCGGGATTTGTACAGACTA 58.143 45.455 0.00 0.00 0.00 2.59
3235 6212 4.250464 CAAGCGGGATTTGTACAGACTAA 58.750 43.478 0.00 0.00 0.00 2.24
3236 6213 4.755266 AGCGGGATTTGTACAGACTAAT 57.245 40.909 0.00 0.00 34.29 1.73
3237 6214 4.442706 AGCGGGATTTGTACAGACTAATG 58.557 43.478 0.00 0.00 32.15 1.90
3238 6215 3.002348 GCGGGATTTGTACAGACTAATGC 59.998 47.826 0.00 0.00 38.03 3.56
3239 6216 4.188462 CGGGATTTGTACAGACTAATGCA 58.812 43.478 10.48 0.00 39.63 3.96
3240 6217 4.271049 CGGGATTTGTACAGACTAATGCAG 59.729 45.833 10.48 4.27 39.63 4.41
3241 6218 4.576463 GGGATTTGTACAGACTAATGCAGG 59.424 45.833 10.48 0.00 39.63 4.85
3242 6219 5.428253 GGATTTGTACAGACTAATGCAGGA 58.572 41.667 0.00 0.00 38.42 3.86
3243 6220 5.294552 GGATTTGTACAGACTAATGCAGGAC 59.705 44.000 0.00 0.00 38.42 3.85
3244 6221 4.882842 TTGTACAGACTAATGCAGGACA 57.117 40.909 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
96 97 2.036933 CAGAAACAGAAAAACGCGAGC 58.963 47.619 15.93 0.00 0.00 5.03
112 113 6.046593 AGTCGTTCAAACAACATCTACAGAA 58.953 36.000 0.00 0.00 0.00 3.02
173 390 1.407979 CAAATCTGAAGATGGCCCTGC 59.592 52.381 0.00 0.00 34.49 4.85
174 391 2.686915 GACAAATCTGAAGATGGCCCTG 59.313 50.000 0.00 0.00 34.49 4.45
175 392 2.681976 CGACAAATCTGAAGATGGCCCT 60.682 50.000 0.00 0.00 34.49 5.19
176 393 1.672881 CGACAAATCTGAAGATGGCCC 59.327 52.381 0.00 0.00 34.49 5.80
177 394 2.359900 ACGACAAATCTGAAGATGGCC 58.640 47.619 0.00 0.00 34.49 5.36
178 395 3.686726 AGAACGACAAATCTGAAGATGGC 59.313 43.478 0.00 0.00 34.49 4.40
179 396 4.331168 GGAGAACGACAAATCTGAAGATGG 59.669 45.833 0.00 0.00 34.49 3.51
180 397 5.462034 GGAGAACGACAAATCTGAAGATG 57.538 43.478 0.00 0.00 34.49 2.90
195 412 0.172803 AAGGATCGGTTCGGAGAACG 59.827 55.000 6.80 3.46 45.90 3.95
196 413 2.381725 AAAGGATCGGTTCGGAGAAC 57.618 50.000 4.47 4.47 45.90 3.01
197 414 2.300723 TCAAAAGGATCGGTTCGGAGAA 59.699 45.455 0.00 0.00 45.90 2.87
198 415 1.897133 TCAAAAGGATCGGTTCGGAGA 59.103 47.619 0.00 0.00 0.00 3.71
199 416 2.271800 CTCAAAAGGATCGGTTCGGAG 58.728 52.381 0.00 0.00 0.00 4.63
200 417 1.066430 CCTCAAAAGGATCGGTTCGGA 60.066 52.381 0.00 0.00 46.67 4.55
201 418 1.369625 CCTCAAAAGGATCGGTTCGG 58.630 55.000 0.00 0.00 46.67 4.30
202 419 0.727398 GCCTCAAAAGGATCGGTTCG 59.273 55.000 0.00 0.00 46.67 3.95
203 420 1.740025 CAGCCTCAAAAGGATCGGTTC 59.260 52.381 0.00 0.00 46.67 3.62
204 421 1.826385 CAGCCTCAAAAGGATCGGTT 58.174 50.000 0.00 0.00 46.67 4.44
205 422 0.678048 GCAGCCTCAAAAGGATCGGT 60.678 55.000 0.00 0.00 46.67 4.69
206 423 1.379642 GGCAGCCTCAAAAGGATCGG 61.380 60.000 3.29 0.00 46.67 4.18
207 424 1.379642 GGGCAGCCTCAAAAGGATCG 61.380 60.000 12.43 0.00 46.67 3.69
208 425 1.039785 GGGGCAGCCTCAAAAGGATC 61.040 60.000 12.43 0.00 46.67 3.36
209 426 1.000866 GGGGCAGCCTCAAAAGGAT 59.999 57.895 12.43 0.00 46.67 3.24
210 427 2.430704 CTGGGGCAGCCTCAAAAGGA 62.431 60.000 17.06 0.00 46.67 3.36
211 428 1.980772 CTGGGGCAGCCTCAAAAGG 60.981 63.158 17.06 0.00 46.44 3.11
212 429 0.540365 TTCTGGGGCAGCCTCAAAAG 60.540 55.000 17.06 3.73 31.34 2.27
213 430 0.114954 ATTCTGGGGCAGCCTCAAAA 59.885 50.000 17.06 9.54 31.34 2.44
214 431 0.114954 AATTCTGGGGCAGCCTCAAA 59.885 50.000 17.06 12.99 31.34 2.69
215 432 0.323725 GAATTCTGGGGCAGCCTCAA 60.324 55.000 17.06 0.63 31.34 3.02
216 433 1.304282 GAATTCTGGGGCAGCCTCA 59.696 57.895 15.23 15.23 30.70 3.86
217 434 1.454663 GGAATTCTGGGGCAGCCTC 60.455 63.158 12.43 8.27 0.00 4.70
218 435 1.931007 GAGGAATTCTGGGGCAGCCT 61.931 60.000 12.43 0.00 0.00 4.58
219 436 1.454663 GAGGAATTCTGGGGCAGCC 60.455 63.158 1.26 1.26 0.00 4.85
220 437 0.106318 ATGAGGAATTCTGGGGCAGC 60.106 55.000 5.23 0.00 0.00 5.25
221 438 1.478288 GGATGAGGAATTCTGGGGCAG 60.478 57.143 5.23 0.00 0.00 4.85
222 439 0.552848 GGATGAGGAATTCTGGGGCA 59.447 55.000 5.23 0.00 0.00 5.36
223 440 0.849417 AGGATGAGGAATTCTGGGGC 59.151 55.000 5.23 0.00 0.00 5.80
224 441 1.423161 GGAGGATGAGGAATTCTGGGG 59.577 57.143 5.23 0.00 0.00 4.96
225 442 2.371510 GAGGAGGATGAGGAATTCTGGG 59.628 54.545 5.23 0.00 0.00 4.45
226 443 3.071312 CAGAGGAGGATGAGGAATTCTGG 59.929 52.174 5.23 0.00 0.00 3.86
227 444 3.494749 GCAGAGGAGGATGAGGAATTCTG 60.495 52.174 5.23 0.00 35.20 3.02
228 445 2.705127 GCAGAGGAGGATGAGGAATTCT 59.295 50.000 5.23 0.00 0.00 2.40
229 446 2.705127 AGCAGAGGAGGATGAGGAATTC 59.295 50.000 0.00 0.00 0.00 2.17
230 447 2.438763 CAGCAGAGGAGGATGAGGAATT 59.561 50.000 0.00 0.00 0.00 2.17
231 448 2.048601 CAGCAGAGGAGGATGAGGAAT 58.951 52.381 0.00 0.00 0.00 3.01
232 449 1.493861 CAGCAGAGGAGGATGAGGAA 58.506 55.000 0.00 0.00 0.00 3.36
233 450 0.398239 CCAGCAGAGGAGGATGAGGA 60.398 60.000 0.00 0.00 0.00 3.71
234 451 1.409251 CCCAGCAGAGGAGGATGAGG 61.409 65.000 0.00 0.00 0.00 3.86
235 452 2.042404 GCCCAGCAGAGGAGGATGAG 62.042 65.000 0.00 0.00 0.00 2.90
236 453 2.068821 GCCCAGCAGAGGAGGATGA 61.069 63.158 0.00 0.00 0.00 2.92
237 454 2.042404 GAGCCCAGCAGAGGAGGATG 62.042 65.000 0.00 0.00 0.00 3.51
238 455 1.765657 GAGCCCAGCAGAGGAGGAT 60.766 63.158 0.00 0.00 0.00 3.24
239 456 2.364842 GAGCCCAGCAGAGGAGGA 60.365 66.667 0.00 0.00 0.00 3.71
240 457 2.042404 GATGAGCCCAGCAGAGGAGG 62.042 65.000 0.00 0.00 0.00 4.30
241 458 1.049855 AGATGAGCCCAGCAGAGGAG 61.050 60.000 0.00 0.00 0.00 3.69
242 459 1.002662 AGATGAGCCCAGCAGAGGA 59.997 57.895 0.00 0.00 0.00 3.71
243 460 1.146485 CAGATGAGCCCAGCAGAGG 59.854 63.158 0.00 0.00 0.00 3.69
244 461 1.524165 GCAGATGAGCCCAGCAGAG 60.524 63.158 0.00 0.00 0.00 3.35
245 462 2.295602 TGCAGATGAGCCCAGCAGA 61.296 57.895 0.00 0.00 0.00 4.26
246 463 1.820056 CTGCAGATGAGCCCAGCAG 60.820 63.158 8.42 0.00 45.44 4.24
247 464 2.271173 CTGCAGATGAGCCCAGCA 59.729 61.111 8.42 0.00 0.00 4.41
248 465 3.210528 GCTGCAGATGAGCCCAGC 61.211 66.667 20.43 0.00 43.10 4.85
249 466 0.752009 ATTGCTGCAGATGAGCCCAG 60.752 55.000 20.43 0.00 35.43 4.45
250 467 0.323999 AATTGCTGCAGATGAGCCCA 60.324 50.000 20.43 0.00 35.43 5.36
251 468 0.822164 AAATTGCTGCAGATGAGCCC 59.178 50.000 20.43 0.00 35.43 5.19
252 469 1.475280 TCAAATTGCTGCAGATGAGCC 59.525 47.619 20.43 0.00 35.43 4.70
253 470 2.933495 TCAAATTGCTGCAGATGAGC 57.067 45.000 20.43 2.17 36.95 4.26
254 471 4.552355 TGTTTCAAATTGCTGCAGATGAG 58.448 39.130 20.43 1.21 0.00 2.90
255 472 4.587584 TGTTTCAAATTGCTGCAGATGA 57.412 36.364 20.43 9.97 0.00 2.92
256 473 4.688879 ACATGTTTCAAATTGCTGCAGATG 59.311 37.500 20.43 9.87 0.00 2.90
257 474 4.890088 ACATGTTTCAAATTGCTGCAGAT 58.110 34.783 20.43 0.00 0.00 2.90
258 475 4.325028 ACATGTTTCAAATTGCTGCAGA 57.675 36.364 20.43 0.00 0.00 4.26
259 476 5.224888 ACTACATGTTTCAAATTGCTGCAG 58.775 37.500 10.11 10.11 0.00 4.41
260 477 5.199024 ACTACATGTTTCAAATTGCTGCA 57.801 34.783 2.30 0.00 0.00 4.41
261 478 7.061094 GTCTTACTACATGTTTCAAATTGCTGC 59.939 37.037 2.30 0.00 0.00 5.25
262 479 7.538678 GGTCTTACTACATGTTTCAAATTGCTG 59.461 37.037 2.30 0.00 0.00 4.41
263 480 7.230510 TGGTCTTACTACATGTTTCAAATTGCT 59.769 33.333 2.30 0.00 0.00 3.91
264 481 7.326063 GTGGTCTTACTACATGTTTCAAATTGC 59.674 37.037 2.30 0.00 29.27 3.56
265 482 8.567948 AGTGGTCTTACTACATGTTTCAAATTG 58.432 33.333 2.30 0.00 31.42 2.32
266 483 8.691661 AGTGGTCTTACTACATGTTTCAAATT 57.308 30.769 2.30 0.00 31.42 1.82
267 484 8.157476 AGAGTGGTCTTACTACATGTTTCAAAT 58.843 33.333 2.30 0.00 31.42 2.32
268 485 7.506114 AGAGTGGTCTTACTACATGTTTCAAA 58.494 34.615 2.30 0.00 31.42 2.69
269 486 7.062749 AGAGTGGTCTTACTACATGTTTCAA 57.937 36.000 2.30 0.00 31.42 2.69
270 487 6.295123 GGAGAGTGGTCTTACTACATGTTTCA 60.295 42.308 2.30 0.00 31.42 2.69
271 488 6.071278 AGGAGAGTGGTCTTACTACATGTTTC 60.071 42.308 2.30 0.00 31.42 2.78
272 489 5.780793 AGGAGAGTGGTCTTACTACATGTTT 59.219 40.000 2.30 0.00 31.42 2.83
273 490 5.186021 CAGGAGAGTGGTCTTACTACATGTT 59.814 44.000 2.30 0.00 31.42 2.71
274 491 4.707448 CAGGAGAGTGGTCTTACTACATGT 59.293 45.833 2.69 2.69 31.42 3.21
275 492 4.098654 CCAGGAGAGTGGTCTTACTACATG 59.901 50.000 0.00 0.00 31.42 3.21
276 493 4.017407 TCCAGGAGAGTGGTCTTACTACAT 60.017 45.833 0.00 0.00 38.88 2.29
277 494 3.332783 TCCAGGAGAGTGGTCTTACTACA 59.667 47.826 0.00 0.00 38.88 2.74
278 495 3.965694 TCCAGGAGAGTGGTCTTACTAC 58.034 50.000 0.00 0.00 38.88 2.73
279 496 4.669866 TTCCAGGAGAGTGGTCTTACTA 57.330 45.455 0.00 0.00 38.88 1.82
280 497 3.544698 TTCCAGGAGAGTGGTCTTACT 57.455 47.619 0.00 0.00 38.88 2.24
281 498 3.515901 ACATTCCAGGAGAGTGGTCTTAC 59.484 47.826 0.00 0.00 36.55 2.34
282 499 3.791320 ACATTCCAGGAGAGTGGTCTTA 58.209 45.455 0.00 0.00 36.55 2.10
283 500 2.625639 ACATTCCAGGAGAGTGGTCTT 58.374 47.619 0.00 0.00 36.55 3.01
284 501 2.334006 ACATTCCAGGAGAGTGGTCT 57.666 50.000 0.00 0.00 36.55 3.85
285 502 3.243569 CGATACATTCCAGGAGAGTGGTC 60.244 52.174 6.20 4.26 36.55 4.02
286 503 2.695666 CGATACATTCCAGGAGAGTGGT 59.304 50.000 6.20 0.00 36.55 4.16
287 504 2.959030 TCGATACATTCCAGGAGAGTGG 59.041 50.000 6.20 0.00 36.55 4.00
288 505 3.381590 TGTCGATACATTCCAGGAGAGTG 59.618 47.826 6.20 2.39 38.16 3.51
289 506 3.381908 GTGTCGATACATTCCAGGAGAGT 59.618 47.826 7.51 0.00 38.08 3.24
290 507 3.381590 TGTGTCGATACATTCCAGGAGAG 59.618 47.826 11.30 0.00 38.08 3.20
291 508 3.361786 TGTGTCGATACATTCCAGGAGA 58.638 45.455 11.30 0.00 38.08 3.71
292 509 3.801114 TGTGTCGATACATTCCAGGAG 57.199 47.619 11.30 0.00 38.08 3.69
293 510 3.259625 TGTTGTGTCGATACATTCCAGGA 59.740 43.478 16.12 0.00 38.08 3.86
294 511 3.370978 GTGTTGTGTCGATACATTCCAGG 59.629 47.826 16.12 0.00 38.08 4.45
295 512 4.091945 CAGTGTTGTGTCGATACATTCCAG 59.908 45.833 16.12 3.37 38.08 3.86
296 513 3.993736 CAGTGTTGTGTCGATACATTCCA 59.006 43.478 16.12 10.20 38.08 3.53
297 514 4.242475 TCAGTGTTGTGTCGATACATTCC 58.758 43.478 16.12 7.83 38.08 3.01
298 515 5.161358 TCTCAGTGTTGTGTCGATACATTC 58.839 41.667 16.12 12.32 38.08 2.67
299 516 5.134202 TCTCAGTGTTGTGTCGATACATT 57.866 39.130 16.12 0.07 38.08 2.71
300 517 4.783764 TCTCAGTGTTGTGTCGATACAT 57.216 40.909 16.12 0.00 38.08 2.29
301 518 4.022329 ACATCTCAGTGTTGTGTCGATACA 60.022 41.667 11.30 11.30 0.00 2.29
302 519 4.486090 ACATCTCAGTGTTGTGTCGATAC 58.514 43.478 5.21 5.21 0.00 2.24
303 520 4.733850 GACATCTCAGTGTTGTGTCGATA 58.266 43.478 0.00 0.00 31.15 2.92
304 521 3.579709 GACATCTCAGTGTTGTGTCGAT 58.420 45.455 0.00 0.00 31.15 3.59
305 522 3.013276 GACATCTCAGTGTTGTGTCGA 57.987 47.619 8.13 0.00 31.15 4.20
307 524 2.726760 GACGACATCTCAGTGTTGTGTC 59.273 50.000 4.75 11.74 44.65 3.67
308 525 2.362397 AGACGACATCTCAGTGTTGTGT 59.638 45.455 4.75 0.00 44.65 3.72
309 526 3.018598 AGACGACATCTCAGTGTTGTG 57.981 47.619 4.75 0.00 44.65 3.33
310 527 4.848562 TTAGACGACATCTCAGTGTTGT 57.151 40.909 0.00 0.00 46.70 3.32
311 528 6.712241 AAATTAGACGACATCTCAGTGTTG 57.288 37.500 0.00 0.00 39.04 3.33
312 529 7.226720 ACAAAAATTAGACGACATCTCAGTGTT 59.773 33.333 0.00 0.00 39.04 3.32
313 530 6.706270 ACAAAAATTAGACGACATCTCAGTGT 59.294 34.615 0.00 0.00 39.04 3.55
314 531 7.116948 AGACAAAAATTAGACGACATCTCAGTG 59.883 37.037 0.00 0.00 39.04 3.66
315 532 7.116948 CAGACAAAAATTAGACGACATCTCAGT 59.883 37.037 0.00 0.00 39.04 3.41
316 533 7.329471 TCAGACAAAAATTAGACGACATCTCAG 59.671 37.037 0.00 0.00 39.04 3.35
317 534 7.151976 TCAGACAAAAATTAGACGACATCTCA 58.848 34.615 0.00 0.00 39.04 3.27
318 535 7.582435 TCAGACAAAAATTAGACGACATCTC 57.418 36.000 0.00 0.00 39.04 2.75
319 536 7.962964 TTCAGACAAAAATTAGACGACATCT 57.037 32.000 0.00 0.00 41.95 2.90
320 537 8.443160 TGATTCAGACAAAAATTAGACGACATC 58.557 33.333 0.00 0.00 0.00 3.06
321 538 8.322906 TGATTCAGACAAAAATTAGACGACAT 57.677 30.769 0.00 0.00 0.00 3.06
322 539 7.722795 TGATTCAGACAAAAATTAGACGACA 57.277 32.000 0.00 0.00 0.00 4.35
333 550 8.623903 GCATCCTACAATATGATTCAGACAAAA 58.376 33.333 0.00 0.00 0.00 2.44
334 551 7.994911 AGCATCCTACAATATGATTCAGACAAA 59.005 33.333 0.00 0.00 0.00 2.83
335 552 7.512130 AGCATCCTACAATATGATTCAGACAA 58.488 34.615 0.00 0.00 0.00 3.18
336 553 7.071069 AGCATCCTACAATATGATTCAGACA 57.929 36.000 0.00 0.00 0.00 3.41
337 554 7.976135 AAGCATCCTACAATATGATTCAGAC 57.024 36.000 0.00 0.00 25.60 3.51
338 555 8.097038 GGTAAGCATCCTACAATATGATTCAGA 58.903 37.037 0.00 0.00 33.96 3.27
339 556 8.099537 AGGTAAGCATCCTACAATATGATTCAG 58.900 37.037 0.00 0.00 33.96 3.02
340 557 7.977818 AGGTAAGCATCCTACAATATGATTCA 58.022 34.615 0.00 0.00 33.96 2.57
341 558 8.854614 AAGGTAAGCATCCTACAATATGATTC 57.145 34.615 0.00 0.00 33.96 2.52
343 560 9.726438 GTTAAGGTAAGCATCCTACAATATGAT 57.274 33.333 0.00 0.00 34.56 2.45
344 561 8.710239 TGTTAAGGTAAGCATCCTACAATATGA 58.290 33.333 0.00 0.00 34.56 2.15
345 562 8.902540 TGTTAAGGTAAGCATCCTACAATATG 57.097 34.615 0.00 0.00 34.56 1.78
346 563 9.726438 GATGTTAAGGTAAGCATCCTACAATAT 57.274 33.333 0.00 0.00 34.56 1.28
347 564 8.710239 TGATGTTAAGGTAAGCATCCTACAATA 58.290 33.333 0.00 0.00 37.51 1.90
348 565 7.573710 TGATGTTAAGGTAAGCATCCTACAAT 58.426 34.615 0.00 0.00 37.51 2.71
349 566 6.953101 TGATGTTAAGGTAAGCATCCTACAA 58.047 36.000 0.00 0.00 37.51 2.41
350 567 6.156256 ACTGATGTTAAGGTAAGCATCCTACA 59.844 38.462 0.00 0.00 37.51 2.74
351 568 6.480320 CACTGATGTTAAGGTAAGCATCCTAC 59.520 42.308 0.00 0.00 37.51 3.18
352 569 6.382859 TCACTGATGTTAAGGTAAGCATCCTA 59.617 38.462 0.00 0.00 37.51 2.94
353 570 5.189736 TCACTGATGTTAAGGTAAGCATCCT 59.810 40.000 0.00 0.00 37.51 3.24
354 571 5.428253 TCACTGATGTTAAGGTAAGCATCC 58.572 41.667 0.00 0.00 37.51 3.51
355 572 8.839310 ATATCACTGATGTTAAGGTAAGCATC 57.161 34.615 1.42 0.00 38.45 3.91
356 573 8.432013 TGATATCACTGATGTTAAGGTAAGCAT 58.568 33.333 0.00 0.00 0.00 3.79
357 574 7.791029 TGATATCACTGATGTTAAGGTAAGCA 58.209 34.615 0.00 0.00 0.00 3.91
358 575 8.552034 GTTGATATCACTGATGTTAAGGTAAGC 58.448 37.037 4.48 0.00 0.00 3.09
359 576 9.046296 GGTTGATATCACTGATGTTAAGGTAAG 57.954 37.037 4.48 0.00 0.00 2.34
360 577 8.544622 TGGTTGATATCACTGATGTTAAGGTAA 58.455 33.333 4.48 0.00 0.00 2.85
361 578 8.084985 TGGTTGATATCACTGATGTTAAGGTA 57.915 34.615 4.48 0.00 0.00 3.08
362 579 6.957631 TGGTTGATATCACTGATGTTAAGGT 58.042 36.000 4.48 0.00 0.00 3.50
363 580 7.554118 ACTTGGTTGATATCACTGATGTTAAGG 59.446 37.037 4.48 0.00 0.00 2.69
364 581 8.498054 ACTTGGTTGATATCACTGATGTTAAG 57.502 34.615 4.48 4.88 0.00 1.85
365 582 8.729756 CAACTTGGTTGATATCACTGATGTTAA 58.270 33.333 4.48 0.00 45.28 2.01
366 583 7.882791 ACAACTTGGTTGATATCACTGATGTTA 59.117 33.333 15.89 0.00 45.28 2.41
367 584 6.716628 ACAACTTGGTTGATATCACTGATGTT 59.283 34.615 15.89 5.93 45.28 2.71
368 585 6.240894 ACAACTTGGTTGATATCACTGATGT 58.759 36.000 15.89 2.34 45.28 3.06
369 586 6.372381 TGACAACTTGGTTGATATCACTGATG 59.628 38.462 15.89 1.74 45.28 3.07
370 587 6.475504 TGACAACTTGGTTGATATCACTGAT 58.524 36.000 15.89 0.00 45.28 2.90
378 595 5.875224 TCCTCAATGACAACTTGGTTGATA 58.125 37.500 15.89 5.83 45.28 2.15
421 638 2.581354 CGCCCCACAGAGGAGAAG 59.419 66.667 0.00 0.00 41.22 2.85
482 699 0.538057 AACATGCTGACACCACCTGG 60.538 55.000 0.00 0.00 42.17 4.45
609 834 5.027293 TCAGCATTCTAGATTGCTTGCTA 57.973 39.130 30.33 17.70 43.12 3.49
619 844 9.520515 AAGAAAGGTAAATTTCAGCATTCTAGA 57.479 29.630 12.94 0.00 40.86 2.43
774 1000 7.779326 TGAGAGACTGAGAGATAATCACAAGAT 59.221 37.037 0.00 0.00 35.53 2.40
825 1051 2.831333 AGACTGAAATATGCTGCCTCG 58.169 47.619 0.00 0.00 0.00 4.63
869 1095 0.954452 GTGGGCCTCACTTGTTTCAG 59.046 55.000 14.93 0.00 42.86 3.02
938 2751 2.686915 GTTCCAGCCAATTCTCATCAGG 59.313 50.000 0.00 0.00 0.00 3.86
1285 3473 8.154203 TGGAATTAGTTTCTCACACATACAGAA 58.846 33.333 0.00 0.00 34.56 3.02
1289 3477 6.595716 AGCTGGAATTAGTTTCTCACACATAC 59.404 38.462 0.00 0.00 34.56 2.39
1305 3493 6.185511 CCACATATCATGGATAGCTGGAATT 58.814 40.000 0.00 0.00 39.87 2.17
1323 3511 4.409901 TCTTCATCTTCATCAGGCCACATA 59.590 41.667 5.01 0.00 0.00 2.29
1382 3570 2.758423 TCGTCACTAGGCTTAAGATGCA 59.242 45.455 6.67 0.00 0.00 3.96
1405 3593 0.247185 TCTACGGCCCGTCGAAAAAT 59.753 50.000 14.44 0.00 41.54 1.82
1458 3646 1.342672 GGTCGGGGCTATTTGGAGGA 61.343 60.000 0.00 0.00 0.00 3.71
1524 3712 2.156917 CTTTGAGGTGCTCTGCAATCA 58.843 47.619 0.00 0.00 41.47 2.57
1761 3953 4.501571 GCTGCTGCTATAAGTGCTAAGGTA 60.502 45.833 8.53 0.00 36.03 3.08
1820 4015 3.860641 CTGCTCCTCTTTCTCTTTCTCC 58.139 50.000 0.00 0.00 0.00 3.71
1957 4475 4.666253 TTGGAGGGTGCTGCTGCC 62.666 66.667 13.47 3.14 38.71 4.85
1993 4511 2.070028 GTCGTCTTTCCCTTTCTCTGC 58.930 52.381 0.00 0.00 0.00 4.26
1994 4512 2.037251 TGGTCGTCTTTCCCTTTCTCTG 59.963 50.000 0.00 0.00 0.00 3.35
1995 4513 2.300437 CTGGTCGTCTTTCCCTTTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
1996 4514 2.689646 CTGGTCGTCTTTCCCTTTCTC 58.310 52.381 0.00 0.00 0.00 2.87
1997 4515 1.270893 GCTGGTCGTCTTTCCCTTTCT 60.271 52.381 0.00 0.00 0.00 2.52
1998 4516 1.157585 GCTGGTCGTCTTTCCCTTTC 58.842 55.000 0.00 0.00 0.00 2.62
1999 4517 0.472471 TGCTGGTCGTCTTTCCCTTT 59.528 50.000 0.00 0.00 0.00 3.11
2000 4518 0.472471 TTGCTGGTCGTCTTTCCCTT 59.528 50.000 0.00 0.00 0.00 3.95
2001 4519 0.250338 GTTGCTGGTCGTCTTTCCCT 60.250 55.000 0.00 0.00 0.00 4.20
2002 4520 0.534203 TGTTGCTGGTCGTCTTTCCC 60.534 55.000 0.00 0.00 0.00 3.97
2003 4521 1.464997 GATGTTGCTGGTCGTCTTTCC 59.535 52.381 0.00 0.00 0.00 3.13
2004 4522 1.464997 GGATGTTGCTGGTCGTCTTTC 59.535 52.381 0.00 0.00 0.00 2.62
2005 4523 1.072331 AGGATGTTGCTGGTCGTCTTT 59.928 47.619 0.00 0.00 0.00 2.52
2006 4524 0.687354 AGGATGTTGCTGGTCGTCTT 59.313 50.000 0.00 0.00 0.00 3.01
2007 4525 0.247736 GAGGATGTTGCTGGTCGTCT 59.752 55.000 0.00 0.00 0.00 4.18
2008 4526 0.741221 GGAGGATGTTGCTGGTCGTC 60.741 60.000 0.00 0.00 0.00 4.20
2009 4527 1.296715 GGAGGATGTTGCTGGTCGT 59.703 57.895 0.00 0.00 0.00 4.34
2010 4528 0.321564 TTGGAGGATGTTGCTGGTCG 60.322 55.000 0.00 0.00 0.00 4.79
2163 4979 8.974060 TGTTACTTCTTTCCTTTACTGACATT 57.026 30.769 0.00 0.00 0.00 2.71
2167 4983 5.995897 GCCTGTTACTTCTTTCCTTTACTGA 59.004 40.000 0.00 0.00 0.00 3.41
2169 4985 5.937111 TGCCTGTTACTTCTTTCCTTTACT 58.063 37.500 0.00 0.00 0.00 2.24
2171 4987 6.182507 TCTGCCTGTTACTTCTTTCCTTTA 57.817 37.500 0.00 0.00 0.00 1.85
2172 4988 5.048846 TCTGCCTGTTACTTCTTTCCTTT 57.951 39.130 0.00 0.00 0.00 3.11
2176 4992 5.473504 TGGAATTCTGCCTGTTACTTCTTTC 59.526 40.000 5.23 0.00 0.00 2.62
2177 4993 5.385198 TGGAATTCTGCCTGTTACTTCTTT 58.615 37.500 5.23 0.00 0.00 2.52
2178 4994 4.985538 TGGAATTCTGCCTGTTACTTCTT 58.014 39.130 5.23 0.00 0.00 2.52
2180 4996 5.705609 TTTGGAATTCTGCCTGTTACTTC 57.294 39.130 5.23 0.00 0.00 3.01
2184 5000 6.662865 TTTGATTTGGAATTCTGCCTGTTA 57.337 33.333 5.23 0.00 0.00 2.41
2185 5001 5.549742 TTTGATTTGGAATTCTGCCTGTT 57.450 34.783 5.23 0.00 0.00 3.16
2188 5004 6.652062 GTCAATTTTGATTTGGAATTCTGCCT 59.348 34.615 5.23 0.00 39.73 4.75
2189 5005 6.128200 GGTCAATTTTGATTTGGAATTCTGCC 60.128 38.462 5.23 0.00 39.73 4.85
2193 5009 5.639082 AGCGGTCAATTTTGATTTGGAATTC 59.361 36.000 0.00 0.00 39.73 2.17
2196 5028 4.038522 TCAGCGGTCAATTTTGATTTGGAA 59.961 37.500 0.00 0.00 39.73 3.53
2198 5030 3.674753 GTCAGCGGTCAATTTTGATTTGG 59.325 43.478 0.00 0.00 39.73 3.28
2199 5031 3.674753 GGTCAGCGGTCAATTTTGATTTG 59.325 43.478 0.00 0.00 39.73 2.32
2200 5032 3.611530 CGGTCAGCGGTCAATTTTGATTT 60.612 43.478 0.00 0.00 39.73 2.17
2201 5033 2.095263 CGGTCAGCGGTCAATTTTGATT 60.095 45.455 0.00 0.00 39.73 2.57
2202 5034 1.468520 CGGTCAGCGGTCAATTTTGAT 59.531 47.619 0.00 0.00 39.73 2.57
2203 5035 0.871722 CGGTCAGCGGTCAATTTTGA 59.128 50.000 0.00 0.00 34.20 2.69
2204 5036 0.871722 TCGGTCAGCGGTCAATTTTG 59.128 50.000 0.00 0.00 0.00 2.44
2208 5040 0.389948 GAACTCGGTCAGCGGTCAAT 60.390 55.000 0.00 0.00 0.00 2.57
2210 5042 1.532604 ATGAACTCGGTCAGCGGTCA 61.533 55.000 0.00 0.00 0.00 4.02
2211 5043 0.802607 GATGAACTCGGTCAGCGGTC 60.803 60.000 0.00 0.00 0.00 4.79
2213 5045 0.526524 GAGATGAACTCGGTCAGCGG 60.527 60.000 0.00 0.00 38.95 5.52
2222 5054 8.988064 TGATTAGTACAAACAGAGATGAACTC 57.012 34.615 0.00 0.00 45.22 3.01
2223 5055 9.950496 ATTGATTAGTACAAACAGAGATGAACT 57.050 29.630 0.00 0.00 0.00 3.01
2225 5057 9.942850 TGATTGATTAGTACAAACAGAGATGAA 57.057 29.630 0.00 0.00 0.00 2.57
2226 5058 9.942850 TTGATTGATTAGTACAAACAGAGATGA 57.057 29.630 0.00 0.00 33.21 2.92
2236 5116 8.791675 TCTGCATGTTTTGATTGATTAGTACAA 58.208 29.630 0.00 0.00 0.00 2.41
2238 5118 8.668353 TCTCTGCATGTTTTGATTGATTAGTAC 58.332 33.333 0.00 0.00 0.00 2.73
2239 5119 8.791327 TCTCTGCATGTTTTGATTGATTAGTA 57.209 30.769 0.00 0.00 0.00 1.82
2242 5122 6.885918 TCCTCTCTGCATGTTTTGATTGATTA 59.114 34.615 0.00 0.00 0.00 1.75
2244 5124 5.125097 GTCCTCTCTGCATGTTTTGATTGAT 59.875 40.000 0.00 0.00 0.00 2.57
2246 5126 4.458295 AGTCCTCTCTGCATGTTTTGATTG 59.542 41.667 0.00 0.00 0.00 2.67
2247 5127 4.660168 AGTCCTCTCTGCATGTTTTGATT 58.340 39.130 0.00 0.00 0.00 2.57
2248 5128 4.260170 GAGTCCTCTCTGCATGTTTTGAT 58.740 43.478 0.00 0.00 37.68 2.57
2265 5145 2.801342 GCAAGTGATCGATGGAGAGTCC 60.801 54.545 0.54 0.00 36.96 3.85
2266 5146 2.100584 AGCAAGTGATCGATGGAGAGTC 59.899 50.000 0.54 0.00 0.00 3.36
2267 5147 2.106566 AGCAAGTGATCGATGGAGAGT 58.893 47.619 0.54 0.00 0.00 3.24
2268 5148 2.886862 AGCAAGTGATCGATGGAGAG 57.113 50.000 0.54 0.00 0.00 3.20
2270 5150 2.035704 AGCTAGCAAGTGATCGATGGAG 59.964 50.000 18.83 0.00 0.00 3.86
2272 5152 2.133553 CAGCTAGCAAGTGATCGATGG 58.866 52.381 18.83 0.00 0.00 3.51
2273 5153 1.526041 GCAGCTAGCAAGTGATCGATG 59.474 52.381 18.83 3.10 44.79 3.84
2274 5154 1.863267 GCAGCTAGCAAGTGATCGAT 58.137 50.000 18.83 0.00 44.79 3.59
2275 5155 3.352447 GCAGCTAGCAAGTGATCGA 57.648 52.632 18.83 0.00 44.79 3.59
2282 5162 7.084752 CAGTTAACTGTGAGCAGCTAGCAAG 62.085 48.000 24.70 10.24 46.30 4.01
2283 5163 5.329948 CAGTTAACTGTGAGCAGCTAGCAA 61.330 45.833 24.70 0.00 46.30 3.91
2284 5164 3.862264 CAGTTAACTGTGAGCAGCTAGCA 60.862 47.826 24.70 0.00 46.30 3.49
2285 5165 2.670414 CAGTTAACTGTGAGCAGCTAGC 59.330 50.000 24.70 6.62 46.30 3.42
2286 5166 4.179926 TCAGTTAACTGTGAGCAGCTAG 57.820 45.455 29.83 5.33 46.30 3.42
2287 5167 4.202212 TGTTCAGTTAACTGTGAGCAGCTA 60.202 41.667 29.83 9.25 46.30 3.32
2288 5168 3.134458 GTTCAGTTAACTGTGAGCAGCT 58.866 45.455 29.83 0.00 46.30 4.24
2291 5171 4.702831 TCATGTTCAGTTAACTGTGAGCA 58.297 39.130 29.83 21.50 44.12 4.26
2292 5172 5.673337 TTCATGTTCAGTTAACTGTGAGC 57.327 39.130 29.83 17.25 44.12 4.26
2293 5173 9.599322 GTATTTTCATGTTCAGTTAACTGTGAG 57.401 33.333 29.83 18.12 44.12 3.51
2294 5174 9.337396 AGTATTTTCATGTTCAGTTAACTGTGA 57.663 29.630 29.83 23.50 44.12 3.58
2295 5175 9.385902 CAGTATTTTCATGTTCAGTTAACTGTG 57.614 33.333 29.83 21.89 44.12 3.66
2296 5176 9.337396 TCAGTATTTTCATGTTCAGTTAACTGT 57.663 29.630 29.83 12.32 44.12 3.55
2299 5179 9.394477 GGTTCAGTATTTTCATGTTCAGTTAAC 57.606 33.333 0.00 0.00 38.67 2.01
2300 5180 9.126151 TGGTTCAGTATTTTCATGTTCAGTTAA 57.874 29.630 0.00 0.00 0.00 2.01
2301 5181 8.684386 TGGTTCAGTATTTTCATGTTCAGTTA 57.316 30.769 0.00 0.00 0.00 2.24
2302 5182 7.581213 TGGTTCAGTATTTTCATGTTCAGTT 57.419 32.000 0.00 0.00 0.00 3.16
2303 5183 7.581213 TTGGTTCAGTATTTTCATGTTCAGT 57.419 32.000 0.00 0.00 0.00 3.41
2304 5184 7.920151 TGTTTGGTTCAGTATTTTCATGTTCAG 59.080 33.333 0.00 0.00 0.00 3.02
2305 5185 7.776107 TGTTTGGTTCAGTATTTTCATGTTCA 58.224 30.769 0.00 0.00 0.00 3.18
2306 5186 8.702438 CATGTTTGGTTCAGTATTTTCATGTTC 58.298 33.333 0.00 0.00 0.00 3.18
2307 5187 7.171337 GCATGTTTGGTTCAGTATTTTCATGTT 59.829 33.333 0.00 0.00 33.78 2.71
2308 5188 6.646240 GCATGTTTGGTTCAGTATTTTCATGT 59.354 34.615 0.00 0.00 33.78 3.21
2309 5189 6.869913 AGCATGTTTGGTTCAGTATTTTCATG 59.130 34.615 0.00 0.00 34.19 3.07
2310 5190 6.996509 AGCATGTTTGGTTCAGTATTTTCAT 58.003 32.000 0.00 0.00 0.00 2.57
2311 5191 6.403866 AGCATGTTTGGTTCAGTATTTTCA 57.596 33.333 0.00 0.00 0.00 2.69
2312 5192 7.593825 AGTAGCATGTTTGGTTCAGTATTTTC 58.406 34.615 0.00 0.00 34.79 2.29
2313 5193 7.309194 GGAGTAGCATGTTTGGTTCAGTATTTT 60.309 37.037 0.00 0.00 34.79 1.82
2314 5194 6.151144 GGAGTAGCATGTTTGGTTCAGTATTT 59.849 38.462 0.00 0.00 34.79 1.40
2315 5195 5.648092 GGAGTAGCATGTTTGGTTCAGTATT 59.352 40.000 0.00 0.00 34.79 1.89
2316 5196 5.045578 AGGAGTAGCATGTTTGGTTCAGTAT 60.046 40.000 0.00 0.00 34.79 2.12
2317 5197 4.286032 AGGAGTAGCATGTTTGGTTCAGTA 59.714 41.667 0.00 0.00 34.79 2.74
2318 5198 3.073062 AGGAGTAGCATGTTTGGTTCAGT 59.927 43.478 0.00 0.00 34.79 3.41
2319 5199 3.679389 AGGAGTAGCATGTTTGGTTCAG 58.321 45.455 0.00 0.00 34.79 3.02
2320 5200 3.788227 AGGAGTAGCATGTTTGGTTCA 57.212 42.857 0.00 0.00 34.79 3.18
2328 5208 5.482908 CTTGAAACACTAGGAGTAGCATGT 58.517 41.667 0.00 0.00 0.00 3.21
2347 5227 2.767960 TCCAGTAGCATGATGAGCTTGA 59.232 45.455 0.00 0.00 43.25 3.02
2393 5273 6.795399 TCAGTCTTGGAACATTTTTGTCTTC 58.205 36.000 0.00 0.00 39.30 2.87
2398 5278 8.359642 TCCTAATTCAGTCTTGGAACATTTTTG 58.640 33.333 0.00 0.00 39.30 2.44
2476 5375 7.333528 TGTTTAGCTTGAATTGTCACTTTCT 57.666 32.000 0.00 0.00 31.90 2.52
2558 5481 9.295825 TGTATTCACTCAAGGTTGATATTTTGT 57.704 29.630 0.00 0.00 36.46 2.83
2662 5585 6.837568 AGAAATTGCAGAGTCCCAAATATGAT 59.162 34.615 0.00 0.00 0.00 2.45
2714 5637 6.491062 AGTTCTTTCACCATTGATCATGAACA 59.509 34.615 8.62 0.00 34.31 3.18
2746 5669 1.953559 CTCACCCATGGTAACCATCG 58.046 55.000 11.73 0.00 43.15 3.84
2762 5685 2.677836 GCAATTCCAATCACTACGCTCA 59.322 45.455 0.00 0.00 0.00 4.26
2802 5725 0.865639 GACAACCAACAACTGCGTGC 60.866 55.000 0.00 0.00 0.00 5.34
2818 5741 2.594303 CTTGCCTTGTGCCCGACA 60.594 61.111 0.00 0.00 40.16 4.35
2820 5743 4.659172 CCCTTGCCTTGTGCCCGA 62.659 66.667 0.00 0.00 40.16 5.14
2871 5794 0.318445 CTGCTCAAGTGGCACAAAGC 60.318 55.000 21.41 22.75 44.16 3.51
2884 5808 0.321387 CTTGCTCTCTTGGCTGCTCA 60.321 55.000 0.00 0.00 0.00 4.26
2928 5852 4.647399 TGAATTTCTTCTTTTCCGGTGGTT 59.353 37.500 0.00 0.00 32.29 3.67
2957 5881 1.349688 AGGGGACGATGCAGTTAACAA 59.650 47.619 8.61 0.00 0.00 2.83
2960 5884 1.906574 AGAAGGGGACGATGCAGTTAA 59.093 47.619 0.00 0.00 0.00 2.01
2969 5893 1.354705 TCTCTCTGAAGAAGGGGACGA 59.645 52.381 0.00 0.00 0.00 4.20
2970 5894 1.748493 CTCTCTCTGAAGAAGGGGACG 59.252 57.143 0.00 0.00 0.00 4.79
2971 5895 1.480545 GCTCTCTCTGAAGAAGGGGAC 59.519 57.143 0.00 0.00 0.00 4.46
3042 5966 2.828520 TCAGTCCTCTGTTTCTGCTAGG 59.171 50.000 0.00 0.00 41.91 3.02
3090 6067 2.434428 AGGCTGCATCTTCAGAAACAG 58.566 47.619 0.50 5.48 36.19 3.16
3176 6153 7.445945 AGTCTGTAGTCTGCATTAGTCTTTTT 58.554 34.615 0.00 0.00 0.00 1.94
3177 6154 6.998802 AGTCTGTAGTCTGCATTAGTCTTTT 58.001 36.000 0.00 0.00 0.00 2.27
3178 6155 6.597832 AGTCTGTAGTCTGCATTAGTCTTT 57.402 37.500 0.00 0.00 0.00 2.52
3179 6156 6.659668 TGTAGTCTGTAGTCTGCATTAGTCTT 59.340 38.462 0.00 0.00 0.00 3.01
3180 6157 6.181190 TGTAGTCTGTAGTCTGCATTAGTCT 58.819 40.000 0.00 0.00 0.00 3.24
3181 6158 6.316640 TCTGTAGTCTGTAGTCTGCATTAGTC 59.683 42.308 0.00 0.00 0.00 2.59
3182 6159 6.094325 GTCTGTAGTCTGTAGTCTGCATTAGT 59.906 42.308 0.00 0.00 0.00 2.24
3183 6160 6.317642 AGTCTGTAGTCTGTAGTCTGCATTAG 59.682 42.308 0.00 0.00 0.00 1.73
3184 6161 6.181190 AGTCTGTAGTCTGTAGTCTGCATTA 58.819 40.000 0.00 0.00 0.00 1.90
3185 6162 5.013547 AGTCTGTAGTCTGTAGTCTGCATT 58.986 41.667 0.00 0.00 0.00 3.56
3186 6163 4.594970 AGTCTGTAGTCTGTAGTCTGCAT 58.405 43.478 0.00 0.00 0.00 3.96
3187 6164 4.022413 AGTCTGTAGTCTGTAGTCTGCA 57.978 45.455 0.00 0.00 0.00 4.41
3188 6165 6.491394 CATTAGTCTGTAGTCTGTAGTCTGC 58.509 44.000 0.00 0.00 0.00 4.26
3189 6166 6.094186 TGCATTAGTCTGTAGTCTGTAGTCTG 59.906 42.308 0.00 0.00 0.00 3.51
3190 6167 6.181190 TGCATTAGTCTGTAGTCTGTAGTCT 58.819 40.000 0.00 0.00 0.00 3.24
3191 6168 6.438259 TGCATTAGTCTGTAGTCTGTAGTC 57.562 41.667 0.00 0.00 0.00 2.59
3192 6169 6.626181 GCTTGCATTAGTCTGTAGTCTGTAGT 60.626 42.308 0.00 0.00 0.00 2.73
3193 6170 5.746245 GCTTGCATTAGTCTGTAGTCTGTAG 59.254 44.000 0.00 0.00 0.00 2.74
3194 6171 5.651530 GCTTGCATTAGTCTGTAGTCTGTA 58.348 41.667 0.00 0.00 0.00 2.74
3195 6172 4.499183 GCTTGCATTAGTCTGTAGTCTGT 58.501 43.478 0.00 0.00 0.00 3.41
3196 6173 3.549471 CGCTTGCATTAGTCTGTAGTCTG 59.451 47.826 0.00 0.00 0.00 3.51
3197 6174 3.429547 CCGCTTGCATTAGTCTGTAGTCT 60.430 47.826 0.00 0.00 0.00 3.24
3198 6175 2.860735 CCGCTTGCATTAGTCTGTAGTC 59.139 50.000 0.00 0.00 0.00 2.59
3199 6176 2.418746 CCCGCTTGCATTAGTCTGTAGT 60.419 50.000 0.00 0.00 0.00 2.73
3200 6177 2.159099 TCCCGCTTGCATTAGTCTGTAG 60.159 50.000 0.00 0.00 0.00 2.74
3201 6178 1.828595 TCCCGCTTGCATTAGTCTGTA 59.171 47.619 0.00 0.00 0.00 2.74
3202 6179 0.613260 TCCCGCTTGCATTAGTCTGT 59.387 50.000 0.00 0.00 0.00 3.41
3203 6180 1.959042 ATCCCGCTTGCATTAGTCTG 58.041 50.000 0.00 0.00 0.00 3.51
3204 6181 2.684881 CAAATCCCGCTTGCATTAGTCT 59.315 45.455 0.00 0.00 0.00 3.24
3205 6182 2.423538 ACAAATCCCGCTTGCATTAGTC 59.576 45.455 0.00 0.00 0.00 2.59
3206 6183 2.446435 ACAAATCCCGCTTGCATTAGT 58.554 42.857 0.00 0.00 0.00 2.24
3207 6184 3.376859 TGTACAAATCCCGCTTGCATTAG 59.623 43.478 0.00 0.00 0.00 1.73
3208 6185 3.348119 TGTACAAATCCCGCTTGCATTA 58.652 40.909 0.00 0.00 0.00 1.90
3209 6186 2.164219 CTGTACAAATCCCGCTTGCATT 59.836 45.455 0.00 0.00 0.00 3.56
3210 6187 1.745087 CTGTACAAATCCCGCTTGCAT 59.255 47.619 0.00 0.00 0.00 3.96
3211 6188 1.164411 CTGTACAAATCCCGCTTGCA 58.836 50.000 0.00 0.00 0.00 4.08
3212 6189 1.130561 GTCTGTACAAATCCCGCTTGC 59.869 52.381 0.00 0.00 0.00 4.01
3213 6190 2.699954 AGTCTGTACAAATCCCGCTTG 58.300 47.619 0.00 0.00 0.00 4.01
3214 6191 4.546829 TTAGTCTGTACAAATCCCGCTT 57.453 40.909 0.00 0.00 0.00 4.68
3215 6192 4.442706 CATTAGTCTGTACAAATCCCGCT 58.557 43.478 0.00 0.00 0.00 5.52
3216 6193 3.002348 GCATTAGTCTGTACAAATCCCGC 59.998 47.826 0.00 0.00 0.00 6.13
3217 6194 4.188462 TGCATTAGTCTGTACAAATCCCG 58.812 43.478 0.00 0.00 0.00 5.14
3218 6195 4.576463 CCTGCATTAGTCTGTACAAATCCC 59.424 45.833 0.00 0.00 0.00 3.85
3219 6196 5.294552 GTCCTGCATTAGTCTGTACAAATCC 59.705 44.000 0.00 0.00 0.00 3.01
3220 6197 5.874810 TGTCCTGCATTAGTCTGTACAAATC 59.125 40.000 0.00 0.00 0.00 2.17
3221 6198 5.804639 TGTCCTGCATTAGTCTGTACAAAT 58.195 37.500 0.00 0.00 0.00 2.32
3222 6199 5.222079 TGTCCTGCATTAGTCTGTACAAA 57.778 39.130 0.00 0.00 0.00 2.83
3223 6200 4.882842 TGTCCTGCATTAGTCTGTACAA 57.117 40.909 0.00 0.00 0.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.