Multiple sequence alignment - TraesCS2B01G400800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G400800 chr2B 100.000 2697 0 0 1 2697 569124347 569127043 0.000000e+00 4981.0
1 TraesCS2B01G400800 chr2B 81.887 657 64 27 1764 2383 473766191 473766829 1.110000e-138 503.0
2 TraesCS2B01G400800 chr2B 83.013 312 47 4 2392 2697 417091627 417091316 7.350000e-71 278.0
3 TraesCS2B01G400800 chr2B 83.267 251 21 14 1763 2003 180568175 180567936 7.570000e-51 211.0
4 TraesCS2B01G400800 chr2A 86.918 1804 126 42 638 2395 628678657 628676918 0.000000e+00 1923.0
5 TraesCS2B01G400800 chr2A 90.282 319 28 1 108 423 771719686 771719368 5.370000e-112 414.0
6 TraesCS2B01G400800 chr2A 88.182 110 6 2 540 644 628686615 628686508 1.010000e-24 124.0
7 TraesCS2B01G400800 chr2A 97.727 44 1 0 469 512 628686652 628686609 2.880000e-10 76.8
8 TraesCS2B01G400800 chr2D 86.854 1704 117 45 767 2395 484380727 484379056 0.000000e+00 1807.0
9 TraesCS2B01G400800 chr2D 85.579 423 58 1 1 420 491375924 491376346 8.860000e-120 440.0
10 TraesCS2B01G400800 chr2D 85.776 232 24 7 2151 2378 615151598 615151824 1.250000e-58 237.0
11 TraesCS2B01G400800 chr2D 92.157 51 4 0 1936 1986 412253671 412253621 3.720000e-09 73.1
12 TraesCS2B01G400800 chr5B 90.499 421 34 2 1 418 133858407 133857990 3.920000e-153 551.0
13 TraesCS2B01G400800 chr4D 89.202 426 43 1 1 423 393619866 393619441 1.840000e-146 529.0
14 TraesCS2B01G400800 chr4D 85.915 426 57 1 1 423 170224670 170224245 4.090000e-123 451.0
15 TraesCS2B01G400800 chr4D 78.714 653 74 30 1763 2391 456128160 456127549 2.540000e-100 375.0
16 TraesCS2B01G400800 chr4D 76.869 428 91 7 1 423 223628377 223627953 4.490000e-58 235.0
17 TraesCS2B01G400800 chr6A 88.967 426 44 1 1 423 155902359 155901934 8.560000e-145 523.0
18 TraesCS2B01G400800 chr6A 85.366 246 23 7 2147 2383 583012436 583012195 2.680000e-60 243.0
19 TraesCS2B01G400800 chr3D 88.993 427 42 3 1 423 9302263 9301838 8.560000e-145 523.0
20 TraesCS2B01G400800 chr3D 88.542 288 29 3 2405 2691 209083973 209083689 1.990000e-91 346.0
21 TraesCS2B01G400800 chr3D 75.314 636 108 23 1763 2383 97058075 97058676 2.660000e-65 259.0
22 TraesCS2B01G400800 chr3D 83.817 241 31 6 2145 2382 5863952 5864187 3.490000e-54 222.0
23 TraesCS2B01G400800 chr3D 95.556 45 2 0 423 467 9301065 9301021 3.720000e-09 73.1
24 TraesCS2B01G400800 chr7A 81.791 681 52 30 1763 2384 8231167 8231834 3.100000e-139 505.0
25 TraesCS2B01G400800 chr7A 84.641 306 42 4 2393 2697 413113744 413113443 1.570000e-77 300.0
26 TraesCS2B01G400800 chr7A 76.829 492 58 25 1908 2387 90373148 90373595 2.700000e-55 226.0
27 TraesCS2B01G400800 chr7A 97.778 45 1 0 423 467 469998998 469999042 8.010000e-11 78.7
28 TraesCS2B01G400800 chr7B 88.525 427 34 4 1 420 714512583 714513001 1.110000e-138 503.0
29 TraesCS2B01G400800 chr7B 79.403 636 67 29 1763 2383 125013831 125014417 9.050000e-105 390.0
30 TraesCS2B01G400800 chr7B 86.111 252 34 1 2446 2696 120162404 120162153 1.230000e-68 270.0
31 TraesCS2B01G400800 chr7B 86.939 245 25 6 2145 2386 147660388 147660628 4.430000e-68 268.0
32 TraesCS2B01G400800 chr1A 81.875 640 75 27 1763 2382 551896067 551896685 4.010000e-138 501.0
33 TraesCS2B01G400800 chr4B 85.681 426 56 3 1 423 89403944 89403521 6.850000e-121 444.0
34 TraesCS2B01G400800 chr4B 79.632 653 82 29 1763 2385 630641091 630640460 3.210000e-114 422.0
35 TraesCS2B01G400800 chr5D 79.658 644 84 28 1763 2385 498310749 498311366 1.150000e-113 420.0
36 TraesCS2B01G400800 chr5D 79.343 639 68 18 1763 2384 482384268 482384859 9.050000e-105 390.0
37 TraesCS2B01G400800 chr5D 84.677 248 30 7 1763 2004 491269296 491269541 9.650000e-60 241.0
38 TraesCS2B01G400800 chr3B 81.339 493 51 23 1763 2243 63429860 63430323 1.970000e-96 363.0
39 TraesCS2B01G400800 chr3B 84.727 275 39 3 2426 2697 227828141 227828415 3.420000e-69 272.0
40 TraesCS2B01G400800 chr3B 85.141 249 30 6 1763 2004 104590769 104590521 5.770000e-62 248.0
41 TraesCS2B01G400800 chr6D 80.492 528 54 20 1763 2251 78819096 78818579 2.550000e-95 359.0
42 TraesCS2B01G400800 chr6D 85.342 307 37 5 2394 2697 131025553 131025854 7.250000e-81 311.0
43 TraesCS2B01G400800 chr3A 84.713 314 42 5 2387 2697 742880073 742880383 2.610000e-80 309.0
44 TraesCS2B01G400800 chr3A 84.053 301 44 3 2399 2697 80432001 80431703 1.220000e-73 287.0
45 TraesCS2B01G400800 chr4A 83.436 326 32 4 2394 2697 520957945 520957620 1.580000e-72 283.0
46 TraesCS2B01G400800 chr7D 87.243 243 24 5 2147 2386 180969942 180970180 1.230000e-68 270.0
47 TraesCS2B01G400800 chr7D 82.520 246 28 8 1763 2003 567337909 567338144 4.550000e-48 202.0
48 TraesCS2B01G400800 chr5A 83.737 289 37 9 2097 2380 672336195 672336478 5.730000e-67 265.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G400800 chr2B 569124347 569127043 2696 False 4981.00 4981 100.0000 1 2697 1 chr2B.!!$F2 2696
1 TraesCS2B01G400800 chr2B 473766191 473766829 638 False 503.00 503 81.8870 1764 2383 1 chr2B.!!$F1 619
2 TraesCS2B01G400800 chr2A 628676918 628678657 1739 True 1923.00 1923 86.9180 638 2395 1 chr2A.!!$R1 1757
3 TraesCS2B01G400800 chr2D 484379056 484380727 1671 True 1807.00 1807 86.8540 767 2395 1 chr2D.!!$R2 1628
4 TraesCS2B01G400800 chr4D 456127549 456128160 611 True 375.00 375 78.7140 1763 2391 1 chr4D.!!$R4 628
5 TraesCS2B01G400800 chr3D 9301021 9302263 1242 True 298.05 523 92.2745 1 467 2 chr3D.!!$R2 466
6 TraesCS2B01G400800 chr3D 97058075 97058676 601 False 259.00 259 75.3140 1763 2383 1 chr3D.!!$F2 620
7 TraesCS2B01G400800 chr7A 8231167 8231834 667 False 505.00 505 81.7910 1763 2384 1 chr7A.!!$F1 621
8 TraesCS2B01G400800 chr7B 125013831 125014417 586 False 390.00 390 79.4030 1763 2383 1 chr7B.!!$F1 620
9 TraesCS2B01G400800 chr1A 551896067 551896685 618 False 501.00 501 81.8750 1763 2382 1 chr1A.!!$F1 619
10 TraesCS2B01G400800 chr4B 630640460 630641091 631 True 422.00 422 79.6320 1763 2385 1 chr4B.!!$R2 622
11 TraesCS2B01G400800 chr5D 498310749 498311366 617 False 420.00 420 79.6580 1763 2385 1 chr5D.!!$F3 622
12 TraesCS2B01G400800 chr5D 482384268 482384859 591 False 390.00 390 79.3430 1763 2384 1 chr5D.!!$F1 621
13 TraesCS2B01G400800 chr6D 78818579 78819096 517 True 359.00 359 80.4920 1763 2251 1 chr6D.!!$R1 488

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
538 1315 0.035458 GGTGGGGAGAGTGTTCACTG 59.965 60.0 10.29 0.0 0.0 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2449 3410 0.099968 TCGCCTCTTACAATCGGACG 59.9 55.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 0.178981 AGCTGCAGGAAACCACACAT 60.179 50.000 17.12 0.00 0.00 3.21
71 72 5.462068 GCAGGAAACCACACATTTTAAAGAC 59.538 40.000 0.00 0.00 0.00 3.01
74 75 6.379988 AGGAAACCACACATTTTAAAGACAGT 59.620 34.615 0.00 0.00 0.00 3.55
84 85 4.530094 TTTAAAGACAGTGTCAGTTGCG 57.470 40.909 24.73 0.00 34.60 4.85
95 96 4.295119 AGTTGCGCGTCGAAGGGT 62.295 61.111 16.09 0.00 0.00 4.34
99 100 2.431260 GCGCGTCGAAGGGTAACA 60.431 61.111 16.09 0.00 39.74 2.41
120 121 3.871006 CACGCTGGATCACAAGCTTATTA 59.129 43.478 0.00 0.00 0.00 0.98
122 123 3.871006 CGCTGGATCACAAGCTTATTACA 59.129 43.478 0.00 0.00 0.00 2.41
171 172 1.760613 CCAACGGAGAGCCACCTAATA 59.239 52.381 0.00 0.00 0.00 0.98
183 184 1.198759 ACCTAATATGGCGGGCCGAT 61.199 55.000 33.44 18.22 39.42 4.18
186 187 1.195442 TAATATGGCGGGCCGATGGA 61.195 55.000 33.44 12.14 39.42 3.41
194 195 3.958860 GGCCGATGGAGGGATGGG 61.959 72.222 0.00 0.00 0.00 4.00
201 202 1.146566 GATGGAGGGATGGGCTGAATT 59.853 52.381 0.00 0.00 0.00 2.17
206 207 0.395724 GGGATGGGCTGAATTTCCGT 60.396 55.000 0.00 0.00 0.00 4.69
207 208 0.740737 GGATGGGCTGAATTTCCGTG 59.259 55.000 0.00 0.00 0.00 4.94
273 274 2.281517 TCGCGAAAACAACTCCAAAGA 58.718 42.857 6.20 0.00 0.00 2.52
312 313 3.370978 ACGCAAAGAATATGTGGTTCGAG 59.629 43.478 0.00 0.00 32.65 4.04
316 317 4.819105 AAGAATATGTGGTTCGAGTCCA 57.181 40.909 7.22 7.22 0.00 4.02
317 318 5.359194 AAGAATATGTGGTTCGAGTCCAT 57.641 39.130 13.14 4.87 37.30 3.41
320 321 4.963318 ATATGTGGTTCGAGTCCATCAT 57.037 40.909 13.14 16.93 37.30 2.45
321 322 6.267699 AGAATATGTGGTTCGAGTCCATCATA 59.732 38.462 20.90 20.90 37.30 2.15
322 323 3.520290 TGTGGTTCGAGTCCATCATAC 57.480 47.619 13.14 3.08 37.30 2.39
323 324 2.167693 TGTGGTTCGAGTCCATCATACC 59.832 50.000 13.14 2.84 37.30 2.73
324 325 2.167693 GTGGTTCGAGTCCATCATACCA 59.832 50.000 13.14 5.36 38.20 3.25
379 383 2.067932 TTTGAGCACCTCCACCCCAG 62.068 60.000 0.00 0.00 0.00 4.45
409 413 1.386155 CCCCTAACCCATTGCCACA 59.614 57.895 0.00 0.00 0.00 4.17
420 424 4.167892 ACCCATTGCCACAAGAATATCCTA 59.832 41.667 0.00 0.00 0.00 2.94
423 427 6.294899 CCCATTGCCACAAGAATATCCTAATG 60.295 42.308 0.00 0.00 0.00 1.90
424 428 6.294899 CCATTGCCACAAGAATATCCTAATGG 60.295 42.308 0.00 0.00 36.15 3.16
425 429 4.144297 TGCCACAAGAATATCCTAATGGC 58.856 43.478 8.90 8.90 42.84 4.40
426 430 4.141181 TGCCACAAGAATATCCTAATGGCT 60.141 41.667 14.92 0.00 42.91 4.75
438 1215 2.170166 CTAATGGCTGCCTTGGACAAA 58.830 47.619 21.03 0.00 0.00 2.83
470 1247 2.593725 CGGCTCGATCCGGTCCTA 60.594 66.667 19.71 0.00 45.38 2.94
471 1248 2.618219 CGGCTCGATCCGGTCCTAG 61.618 68.421 19.71 0.00 45.38 3.02
472 1249 1.528776 GGCTCGATCCGGTCCTAGT 60.529 63.158 0.00 0.00 0.00 2.57
473 1250 1.108132 GGCTCGATCCGGTCCTAGTT 61.108 60.000 0.00 0.00 0.00 2.24
474 1251 0.745468 GCTCGATCCGGTCCTAGTTT 59.255 55.000 0.00 0.00 0.00 2.66
475 1252 1.269154 GCTCGATCCGGTCCTAGTTTC 60.269 57.143 0.00 0.00 0.00 2.78
476 1253 2.022195 CTCGATCCGGTCCTAGTTTCA 58.978 52.381 0.00 0.00 0.00 2.69
477 1254 2.426024 CTCGATCCGGTCCTAGTTTCAA 59.574 50.000 0.00 0.00 0.00 2.69
478 1255 2.827322 TCGATCCGGTCCTAGTTTCAAA 59.173 45.455 0.00 0.00 0.00 2.69
479 1256 3.258872 TCGATCCGGTCCTAGTTTCAAAA 59.741 43.478 0.00 0.00 0.00 2.44
480 1257 4.081309 TCGATCCGGTCCTAGTTTCAAAAT 60.081 41.667 0.00 0.00 0.00 1.82
481 1258 4.270325 CGATCCGGTCCTAGTTTCAAAATC 59.730 45.833 0.00 0.00 0.00 2.17
482 1259 4.903045 TCCGGTCCTAGTTTCAAAATCT 57.097 40.909 0.00 0.00 0.00 2.40
483 1260 4.575885 TCCGGTCCTAGTTTCAAAATCTG 58.424 43.478 0.00 0.00 0.00 2.90
484 1261 4.285003 TCCGGTCCTAGTTTCAAAATCTGA 59.715 41.667 0.00 0.00 0.00 3.27
485 1262 4.392138 CCGGTCCTAGTTTCAAAATCTGAC 59.608 45.833 0.00 0.00 32.21 3.51
486 1263 4.091509 CGGTCCTAGTTTCAAAATCTGACG 59.908 45.833 0.00 0.00 32.21 4.35
487 1264 4.995487 GGTCCTAGTTTCAAAATCTGACGT 59.005 41.667 0.00 0.00 32.21 4.34
488 1265 5.107065 GGTCCTAGTTTCAAAATCTGACGTG 60.107 44.000 0.00 0.00 32.21 4.49
489 1266 4.994852 TCCTAGTTTCAAAATCTGACGTGG 59.005 41.667 0.00 0.00 32.21 4.94
490 1267 3.626028 AGTTTCAAAATCTGACGTGGC 57.374 42.857 0.00 0.00 32.21 5.01
491 1268 2.948979 AGTTTCAAAATCTGACGTGGCA 59.051 40.909 0.00 0.00 32.21 4.92
492 1269 3.042887 GTTTCAAAATCTGACGTGGCAC 58.957 45.455 7.79 7.79 32.21 5.01
493 1270 1.234821 TCAAAATCTGACGTGGCACC 58.765 50.000 12.86 0.00 0.00 5.01
494 1271 0.110238 CAAAATCTGACGTGGCACCG 60.110 55.000 12.86 9.88 0.00 4.94
495 1272 1.234615 AAAATCTGACGTGGCACCGG 61.235 55.000 12.86 0.00 0.00 5.28
496 1273 2.391724 AAATCTGACGTGGCACCGGT 62.392 55.000 12.86 0.00 0.00 5.28
497 1274 2.781595 AATCTGACGTGGCACCGGTC 62.782 60.000 12.86 14.70 0.00 4.79
511 1288 2.501610 GGTCCTGCACCGAGATCC 59.498 66.667 0.00 0.00 34.56 3.36
512 1289 2.105128 GTCCTGCACCGAGATCCG 59.895 66.667 0.00 0.00 38.18 4.18
513 1290 2.362503 TCCTGCACCGAGATCCGT 60.363 61.111 0.00 0.00 36.31 4.69
514 1291 2.202797 CCTGCACCGAGATCCGTG 60.203 66.667 0.00 0.00 36.31 4.94
515 1292 2.887568 CTGCACCGAGATCCGTGC 60.888 66.667 18.49 18.49 41.88 5.34
516 1293 3.647649 CTGCACCGAGATCCGTGCA 62.648 63.158 23.65 23.65 45.55 4.57
517 1294 2.434185 GCACCGAGATCCGTGCAA 60.434 61.111 19.76 0.00 41.49 4.08
518 1295 1.815421 GCACCGAGATCCGTGCAAT 60.815 57.895 19.76 0.00 41.49 3.56
519 1296 2.009108 CACCGAGATCCGTGCAATG 58.991 57.895 0.00 0.00 36.31 2.82
521 1298 1.153369 CCGAGATCCGTGCAATGGT 60.153 57.895 6.17 0.00 45.66 3.55
522 1299 1.431488 CCGAGATCCGTGCAATGGTG 61.431 60.000 6.17 0.00 45.66 4.17
523 1300 1.431488 CGAGATCCGTGCAATGGTGG 61.431 60.000 6.17 0.00 45.66 4.61
524 1301 1.077501 AGATCCGTGCAATGGTGGG 60.078 57.895 6.17 0.00 45.66 4.61
525 1302 2.044053 ATCCGTGCAATGGTGGGG 60.044 61.111 6.17 0.00 45.66 4.96
526 1303 2.550699 GATCCGTGCAATGGTGGGGA 62.551 60.000 6.17 0.00 45.66 4.81
527 1304 2.556840 ATCCGTGCAATGGTGGGGAG 62.557 60.000 6.17 0.00 45.66 4.30
528 1305 2.350895 CGTGCAATGGTGGGGAGA 59.649 61.111 0.00 0.00 0.00 3.71
529 1306 1.746615 CGTGCAATGGTGGGGAGAG 60.747 63.158 0.00 0.00 0.00 3.20
530 1307 1.380302 GTGCAATGGTGGGGAGAGT 59.620 57.895 0.00 0.00 0.00 3.24
531 1308 0.962356 GTGCAATGGTGGGGAGAGTG 60.962 60.000 0.00 0.00 0.00 3.51
532 1309 1.380302 GCAATGGTGGGGAGAGTGT 59.620 57.895 0.00 0.00 0.00 3.55
533 1310 0.251341 GCAATGGTGGGGAGAGTGTT 60.251 55.000 0.00 0.00 0.00 3.32
534 1311 1.826385 CAATGGTGGGGAGAGTGTTC 58.174 55.000 0.00 0.00 0.00 3.18
535 1312 1.073763 CAATGGTGGGGAGAGTGTTCA 59.926 52.381 0.00 0.00 0.00 3.18
536 1313 0.693049 ATGGTGGGGAGAGTGTTCAC 59.307 55.000 0.00 0.00 0.00 3.18
537 1314 0.399949 TGGTGGGGAGAGTGTTCACT 60.400 55.000 5.08 5.08 0.00 3.41
538 1315 0.035458 GGTGGGGAGAGTGTTCACTG 59.965 60.000 10.29 0.00 0.00 3.66
539 1316 0.035458 GTGGGGAGAGTGTTCACTGG 59.965 60.000 10.29 0.00 0.00 4.00
540 1317 0.105194 TGGGGAGAGTGTTCACTGGA 60.105 55.000 10.29 0.00 0.00 3.86
541 1318 0.610687 GGGGAGAGTGTTCACTGGAG 59.389 60.000 10.29 0.00 0.00 3.86
542 1319 1.633774 GGGAGAGTGTTCACTGGAGA 58.366 55.000 10.29 0.00 0.00 3.71
543 1320 2.183679 GGGAGAGTGTTCACTGGAGAT 58.816 52.381 10.29 0.00 0.00 2.75
544 1321 2.167487 GGGAGAGTGTTCACTGGAGATC 59.833 54.545 10.29 0.00 0.00 2.75
545 1322 2.828520 GGAGAGTGTTCACTGGAGATCA 59.171 50.000 10.29 0.00 0.00 2.92
546 1323 3.450457 GGAGAGTGTTCACTGGAGATCAT 59.550 47.826 10.29 0.00 0.00 2.45
547 1324 4.441356 GGAGAGTGTTCACTGGAGATCATC 60.441 50.000 10.29 0.00 0.00 2.92
548 1325 4.092279 AGAGTGTTCACTGGAGATCATCA 58.908 43.478 10.29 0.00 0.00 3.07
549 1326 4.529769 AGAGTGTTCACTGGAGATCATCAA 59.470 41.667 10.29 0.00 0.00 2.57
550 1327 5.012458 AGAGTGTTCACTGGAGATCATCAAA 59.988 40.000 10.29 0.00 0.00 2.69
551 1328 5.813383 AGTGTTCACTGGAGATCATCAAAT 58.187 37.500 4.58 0.00 0.00 2.32
552 1329 6.950842 AGTGTTCACTGGAGATCATCAAATA 58.049 36.000 4.58 0.00 0.00 1.40
553 1330 7.571919 AGTGTTCACTGGAGATCATCAAATAT 58.428 34.615 4.58 0.00 0.00 1.28
554 1331 7.714377 AGTGTTCACTGGAGATCATCAAATATC 59.286 37.037 4.58 0.00 0.00 1.63
555 1332 6.994496 TGTTCACTGGAGATCATCAAATATCC 59.006 38.462 0.00 0.00 37.51 2.59
556 1333 5.787380 TCACTGGAGATCATCAAATATCCG 58.213 41.667 0.00 0.00 39.44 4.18
557 1334 4.934001 CACTGGAGATCATCAAATATCCGG 59.066 45.833 0.00 0.00 45.19 5.14
558 1335 3.937706 CTGGAGATCATCAAATATCCGGC 59.062 47.826 0.00 0.00 39.44 6.13
559 1336 2.932614 GGAGATCATCAAATATCCGGCG 59.067 50.000 0.00 0.00 28.05 6.46
560 1337 3.589988 GAGATCATCAAATATCCGGCGT 58.410 45.455 6.01 0.00 0.00 5.68
561 1338 3.997021 GAGATCATCAAATATCCGGCGTT 59.003 43.478 6.01 0.00 0.00 4.84
562 1339 3.997021 AGATCATCAAATATCCGGCGTTC 59.003 43.478 6.01 0.00 0.00 3.95
563 1340 2.131972 TCATCAAATATCCGGCGTTCG 58.868 47.619 6.01 0.00 38.88 3.95
564 1341 2.131972 CATCAAATATCCGGCGTTCGA 58.868 47.619 6.01 0.00 42.43 3.71
565 1342 1.847818 TCAAATATCCGGCGTTCGAG 58.152 50.000 6.01 0.00 42.43 4.04
566 1343 0.232303 CAAATATCCGGCGTTCGAGC 59.768 55.000 6.01 0.00 42.43 5.03
574 1351 2.126189 GCGTTCGAGCCGGTTACT 60.126 61.111 1.90 0.00 0.00 2.24
575 1352 1.137404 GCGTTCGAGCCGGTTACTA 59.863 57.895 1.90 0.00 0.00 1.82
576 1353 0.248784 GCGTTCGAGCCGGTTACTAT 60.249 55.000 1.90 0.00 0.00 2.12
577 1354 1.800286 GCGTTCGAGCCGGTTACTATT 60.800 52.381 1.90 0.00 0.00 1.73
578 1355 2.533266 CGTTCGAGCCGGTTACTATTT 58.467 47.619 1.90 0.00 0.00 1.40
579 1356 2.533129 CGTTCGAGCCGGTTACTATTTC 59.467 50.000 1.90 0.00 0.00 2.17
580 1357 2.862536 GTTCGAGCCGGTTACTATTTCC 59.137 50.000 1.90 0.00 0.00 3.13
581 1358 2.101783 TCGAGCCGGTTACTATTTCCA 58.898 47.619 1.90 0.00 0.00 3.53
582 1359 2.696707 TCGAGCCGGTTACTATTTCCAT 59.303 45.455 1.90 0.00 0.00 3.41
583 1360 3.057734 CGAGCCGGTTACTATTTCCATC 58.942 50.000 1.90 0.00 0.00 3.51
584 1361 3.243771 CGAGCCGGTTACTATTTCCATCT 60.244 47.826 1.90 0.00 0.00 2.90
585 1362 4.308265 GAGCCGGTTACTATTTCCATCTC 58.692 47.826 1.90 0.00 0.00 2.75
586 1363 3.967987 AGCCGGTTACTATTTCCATCTCT 59.032 43.478 1.90 0.00 0.00 3.10
587 1364 5.145564 AGCCGGTTACTATTTCCATCTCTA 58.854 41.667 1.90 0.00 0.00 2.43
588 1365 5.601313 AGCCGGTTACTATTTCCATCTCTAA 59.399 40.000 1.90 0.00 0.00 2.10
589 1366 6.099269 AGCCGGTTACTATTTCCATCTCTAAA 59.901 38.462 1.90 0.00 0.00 1.85
590 1367 6.935208 GCCGGTTACTATTTCCATCTCTAAAT 59.065 38.462 1.90 0.00 0.00 1.40
591 1368 7.095187 GCCGGTTACTATTTCCATCTCTAAATG 60.095 40.741 1.90 0.00 0.00 2.32
592 1369 8.148351 CCGGTTACTATTTCCATCTCTAAATGA 58.852 37.037 0.00 0.00 0.00 2.57
593 1370 9.712305 CGGTTACTATTTCCATCTCTAAATGAT 57.288 33.333 0.00 0.00 0.00 2.45
597 1374 8.985315 ACTATTTCCATCTCTAAATGATGCAA 57.015 30.769 0.00 0.00 39.76 4.08
598 1375 9.064706 ACTATTTCCATCTCTAAATGATGCAAG 57.935 33.333 0.00 0.00 39.76 4.01
599 1376 5.762825 TTCCATCTCTAAATGATGCAAGC 57.237 39.130 0.00 0.00 39.76 4.01
600 1377 4.139786 TCCATCTCTAAATGATGCAAGCC 58.860 43.478 0.00 0.00 39.76 4.35
601 1378 3.058432 CCATCTCTAAATGATGCAAGCCG 60.058 47.826 0.00 0.00 39.76 5.52
602 1379 3.266510 TCTCTAAATGATGCAAGCCGT 57.733 42.857 0.00 0.00 0.00 5.68
603 1380 2.938451 TCTCTAAATGATGCAAGCCGTG 59.062 45.455 0.00 0.00 0.00 4.94
604 1381 2.679837 CTCTAAATGATGCAAGCCGTGT 59.320 45.455 0.00 0.00 0.00 4.49
605 1382 3.081061 TCTAAATGATGCAAGCCGTGTT 58.919 40.909 0.00 0.00 0.00 3.32
606 1383 2.068837 AAATGATGCAAGCCGTGTTG 57.931 45.000 0.00 0.00 0.00 3.33
613 1390 3.628005 CAAGCCGTGTTGCATATGG 57.372 52.632 4.56 5.57 0.00 2.74
614 1391 0.526096 CAAGCCGTGTTGCATATGGC 60.526 55.000 21.17 21.17 46.07 4.40
615 1392 1.666209 AAGCCGTGTTGCATATGGCC 61.666 55.000 23.66 0.00 46.92 5.36
616 1393 2.413963 GCCGTGTTGCATATGGCCA 61.414 57.895 8.56 8.56 43.89 5.36
617 1394 1.737355 GCCGTGTTGCATATGGCCAT 61.737 55.000 24.45 24.45 43.89 4.40
618 1395 0.746063 CCGTGTTGCATATGGCCATT 59.254 50.000 26.37 9.15 43.89 3.16
619 1396 1.536496 CCGTGTTGCATATGGCCATTG 60.536 52.381 26.37 21.27 43.89 2.82
620 1397 1.134753 CGTGTTGCATATGGCCATTGT 59.865 47.619 26.37 10.75 43.89 2.71
621 1398 2.542597 GTGTTGCATATGGCCATTGTG 58.457 47.619 26.37 22.85 43.89 3.33
622 1399 1.134759 TGTTGCATATGGCCATTGTGC 60.135 47.619 32.71 32.71 43.89 4.57
631 1408 2.903284 GCCATTGTGCCAAACTGTG 58.097 52.632 0.00 0.00 0.00 3.66
632 1409 0.104671 GCCATTGTGCCAAACTGTGT 59.895 50.000 0.00 0.00 0.00 3.72
633 1410 1.339610 GCCATTGTGCCAAACTGTGTA 59.660 47.619 0.00 0.00 0.00 2.90
634 1411 2.029110 GCCATTGTGCCAAACTGTGTAT 60.029 45.455 0.00 0.00 0.00 2.29
635 1412 3.554752 GCCATTGTGCCAAACTGTGTATT 60.555 43.478 0.00 0.00 0.00 1.89
636 1413 4.321601 GCCATTGTGCCAAACTGTGTATTA 60.322 41.667 0.00 0.00 0.00 0.98
679 1456 3.854994 AGATCCTTTGGAATCCCAGAACT 59.145 43.478 0.00 0.00 44.60 3.01
791 1568 2.350007 GCAGAGAGATCGATGGTACGAC 60.350 54.545 0.54 0.00 44.84 4.34
856 1635 9.314501 GTTACGAGTTTGATTGAGACAAAATAC 57.685 33.333 0.00 0.00 38.63 1.89
857 1636 7.490962 ACGAGTTTGATTGAGACAAAATACA 57.509 32.000 0.00 0.00 38.63 2.29
1041 1830 2.230660 GTTCACTGGGGAGAGGTTTTG 58.769 52.381 0.00 0.00 0.00 2.44
1054 1843 1.686587 AGGTTTTGTGGTTTAGCTGGC 59.313 47.619 0.00 0.00 0.00 4.85
1063 1852 1.819288 GGTTTAGCTGGCTTTCCTTCC 59.181 52.381 0.00 0.00 0.00 3.46
1096 1885 0.410663 TACGGTTCCCCTCCTTCTCA 59.589 55.000 0.00 0.00 0.00 3.27
1097 1886 0.473117 ACGGTTCCCCTCCTTCTCAA 60.473 55.000 0.00 0.00 0.00 3.02
1098 1887 0.250513 CGGTTCCCCTCCTTCTCAAG 59.749 60.000 0.00 0.00 0.00 3.02
1099 1888 1.657804 GGTTCCCCTCCTTCTCAAGA 58.342 55.000 0.00 0.00 0.00 3.02
1100 1889 2.200955 GGTTCCCCTCCTTCTCAAGAT 58.799 52.381 0.00 0.00 0.00 2.40
1102 1891 1.781786 TCCCCTCCTTCTCAAGATCG 58.218 55.000 0.00 0.00 0.00 3.69
1137 1936 2.425143 TCATCAATCTGGTTCCAGGC 57.575 50.000 17.37 0.00 35.01 4.85
1207 2007 2.906458 CTCCTGCTCGCCCTCATT 59.094 61.111 0.00 0.00 0.00 2.57
1261 2061 2.584418 CTCGAGCTCACCGGCATG 60.584 66.667 15.40 0.00 34.17 4.06
1361 2161 2.598394 TGGGCAACAGCTTCAGCC 60.598 61.111 10.80 10.80 46.28 4.85
1537 2340 2.811317 GAGTTGCGCTGGGACTCG 60.811 66.667 9.73 0.00 31.54 4.18
1639 2442 3.974835 ATCGCGGGTGCTGCATCAA 62.975 57.895 15.74 0.00 39.65 2.57
1702 2505 4.310769 CAGACGAGGAGTTTTGACTGATT 58.689 43.478 0.00 0.00 0.00 2.57
1705 2508 4.451900 ACGAGGAGTTTTGACTGATTTGT 58.548 39.130 0.00 0.00 0.00 2.83
1706 2509 5.607477 ACGAGGAGTTTTGACTGATTTGTA 58.393 37.500 0.00 0.00 0.00 2.41
1707 2510 5.465724 ACGAGGAGTTTTGACTGATTTGTAC 59.534 40.000 0.00 0.00 0.00 2.90
1735 2538 3.056313 GCAGCACGAATTCCCAGCC 62.056 63.158 0.00 0.00 0.00 4.85
1745 2548 1.717032 ATTCCCAGCCTATGCGTCTA 58.283 50.000 0.00 0.00 44.33 2.59
1754 2569 5.122396 CCAGCCTATGCGTCTATTATTTTCC 59.878 44.000 0.00 0.00 44.33 3.13
1759 2574 8.604890 GCCTATGCGTCTATTATTTTCCTATTC 58.395 37.037 0.00 0.00 0.00 1.75
1852 2681 3.202906 TGGTCCTTCAAGTCTCAAAACG 58.797 45.455 0.00 0.00 0.00 3.60
1894 2724 2.549754 CAGATTTTGAGCACGTTGACCT 59.450 45.455 0.00 0.00 0.00 3.85
1904 2744 2.805657 GCACGTTGACCTAGTTTGACCT 60.806 50.000 0.00 0.00 0.00 3.85
2034 2928 1.784283 GTGCGTGTAAATTGTTGTGGC 59.216 47.619 0.00 0.00 0.00 5.01
2046 2940 5.743636 ATTGTTGTGGCCAAATAACATCT 57.256 34.783 23.90 15.45 33.56 2.90
2186 3113 4.331168 TGCCACAAAATTTCGGAGTTTTTG 59.669 37.500 18.24 18.24 42.93 2.44
2192 3120 7.477112 CACAAAATTTCGGAGTTTTTGTTGAAC 59.523 33.333 20.90 0.00 46.07 3.18
2312 3266 6.877611 TTTGAGACTTGAAGGACCAAATAC 57.122 37.500 0.00 0.00 0.00 1.89
2314 3268 4.349636 TGAGACTTGAAGGACCAAATACCA 59.650 41.667 0.00 0.00 0.00 3.25
2395 3356 8.577296 ACATACTTTTCTCTTTTTCTTTAGGGC 58.423 33.333 0.00 0.00 0.00 5.19
2396 3357 8.576442 CATACTTTTCTCTTTTTCTTTAGGGCA 58.424 33.333 0.00 0.00 0.00 5.36
2397 3358 7.043961 ACTTTTCTCTTTTTCTTTAGGGCAG 57.956 36.000 0.00 0.00 0.00 4.85
2398 3359 6.607600 ACTTTTCTCTTTTTCTTTAGGGCAGT 59.392 34.615 0.00 0.00 0.00 4.40
2399 3360 6.391227 TTTCTCTTTTTCTTTAGGGCAGTG 57.609 37.500 0.00 0.00 0.00 3.66
2400 3361 3.821033 TCTCTTTTTCTTTAGGGCAGTGC 59.179 43.478 6.55 6.55 0.00 4.40
2401 3362 3.823304 CTCTTTTTCTTTAGGGCAGTGCT 59.177 43.478 16.11 0.00 0.00 4.40
2402 3363 4.980573 TCTTTTTCTTTAGGGCAGTGCTA 58.019 39.130 16.11 0.00 0.00 3.49
2403 3364 5.570320 TCTTTTTCTTTAGGGCAGTGCTAT 58.430 37.500 16.11 6.46 0.00 2.97
2404 3365 5.415701 TCTTTTTCTTTAGGGCAGTGCTATG 59.584 40.000 16.11 0.29 0.00 2.23
2405 3366 2.332063 TCTTTAGGGCAGTGCTATGC 57.668 50.000 16.11 5.28 45.74 3.14
2411 3372 3.929948 GCAGTGCTATGCGTCGGC 61.930 66.667 8.18 0.00 36.28 5.54
2412 3373 3.264897 CAGTGCTATGCGTCGGCC 61.265 66.667 0.00 0.00 38.85 6.13
2413 3374 4.873129 AGTGCTATGCGTCGGCCG 62.873 66.667 22.12 22.12 38.85 6.13
2414 3375 4.865761 GTGCTATGCGTCGGCCGA 62.866 66.667 27.28 27.28 39.56 5.54
2415 3376 4.136511 TGCTATGCGTCGGCCGAA 62.137 61.111 32.93 16.23 39.56 4.30
2416 3377 3.330853 GCTATGCGTCGGCCGAAG 61.331 66.667 32.94 32.94 39.56 3.79
2435 3396 5.628134 CGAAGGATCTTTTAAAAAGACCCG 58.372 41.667 1.66 2.81 35.02 5.28
2436 3397 5.386958 AAGGATCTTTTAAAAAGACCCGC 57.613 39.130 1.66 0.00 35.02 6.13
2437 3398 4.663334 AGGATCTTTTAAAAAGACCCGCT 58.337 39.130 1.66 0.00 35.02 5.52
2438 3399 4.459337 AGGATCTTTTAAAAAGACCCGCTG 59.541 41.667 1.66 0.00 35.02 5.18
2439 3400 3.636282 TCTTTTAAAAAGACCCGCTGC 57.364 42.857 1.66 0.00 0.00 5.25
2440 3401 2.295070 TCTTTTAAAAAGACCCGCTGCC 59.705 45.455 1.66 0.00 0.00 4.85
2441 3402 1.989706 TTTAAAAAGACCCGCTGCCT 58.010 45.000 0.00 0.00 0.00 4.75
2442 3403 1.530323 TTAAAAAGACCCGCTGCCTC 58.470 50.000 0.00 0.00 0.00 4.70
2443 3404 0.672401 TAAAAAGACCCGCTGCCTCG 60.672 55.000 0.00 0.00 0.00 4.63
2444 3405 2.676163 AAAAAGACCCGCTGCCTCGT 62.676 55.000 0.00 0.00 0.00 4.18
2445 3406 3.883744 AAAGACCCGCTGCCTCGTG 62.884 63.158 0.00 0.00 0.00 4.35
2447 3408 4.803426 GACCCGCTGCCTCGTGAG 62.803 72.222 0.00 0.00 0.00 3.51
2453 3414 4.803426 CTGCCTCGTGAGCCGTCC 62.803 72.222 0.00 0.00 37.94 4.79
2456 3417 3.518998 CCTCGTGAGCCGTCCGAT 61.519 66.667 0.00 0.00 37.94 4.18
2457 3418 2.490217 CTCGTGAGCCGTCCGATT 59.510 61.111 0.00 0.00 37.94 3.34
2458 3419 1.874019 CTCGTGAGCCGTCCGATTG 60.874 63.158 0.00 0.00 37.94 2.67
2459 3420 2.126071 CGTGAGCCGTCCGATTGT 60.126 61.111 0.00 0.00 0.00 2.71
2460 3421 1.138036 CGTGAGCCGTCCGATTGTA 59.862 57.895 0.00 0.00 0.00 2.41
2461 3422 0.457166 CGTGAGCCGTCCGATTGTAA 60.457 55.000 0.00 0.00 0.00 2.41
2462 3423 1.278238 GTGAGCCGTCCGATTGTAAG 58.722 55.000 0.00 0.00 0.00 2.34
2463 3424 1.135199 GTGAGCCGTCCGATTGTAAGA 60.135 52.381 0.00 0.00 0.00 2.10
2464 3425 1.134367 TGAGCCGTCCGATTGTAAGAG 59.866 52.381 0.00 0.00 0.00 2.85
2465 3426 0.460311 AGCCGTCCGATTGTAAGAGG 59.540 55.000 0.00 0.00 0.00 3.69
2466 3427 1.152383 GCCGTCCGATTGTAAGAGGC 61.152 60.000 0.00 0.00 36.32 4.70
2467 3428 0.870307 CCGTCCGATTGTAAGAGGCG 60.870 60.000 0.00 0.00 0.00 5.52
2468 3429 0.099968 CGTCCGATTGTAAGAGGCGA 59.900 55.000 0.00 0.00 0.00 5.54
2469 3430 1.841450 GTCCGATTGTAAGAGGCGAG 58.159 55.000 0.00 0.00 0.00 5.03
2470 3431 0.102481 TCCGATTGTAAGAGGCGAGC 59.898 55.000 0.00 0.00 0.00 5.03
2471 3432 0.876342 CCGATTGTAAGAGGCGAGCC 60.876 60.000 5.89 5.89 0.00 4.70
2472 3433 1.209275 CGATTGTAAGAGGCGAGCCG 61.209 60.000 8.63 0.00 41.95 5.52
2473 3434 0.179108 GATTGTAAGAGGCGAGCCGT 60.179 55.000 8.63 1.04 41.95 5.68
2474 3435 0.179108 ATTGTAAGAGGCGAGCCGTC 60.179 55.000 8.63 6.93 41.95 4.79
2475 3436 2.104530 GTAAGAGGCGAGCCGTCC 59.895 66.667 8.63 2.53 41.95 4.79
2476 3437 2.361992 TAAGAGGCGAGCCGTCCA 60.362 61.111 8.63 0.00 41.95 4.02
2477 3438 1.756950 TAAGAGGCGAGCCGTCCAT 60.757 57.895 8.63 0.00 41.95 3.41
2478 3439 1.327690 TAAGAGGCGAGCCGTCCATT 61.328 55.000 8.63 3.49 41.95 3.16
2479 3440 2.579684 AAGAGGCGAGCCGTCCATTC 62.580 60.000 8.63 0.00 41.95 2.67
2480 3441 3.077556 AGGCGAGCCGTCCATTCT 61.078 61.111 8.63 0.00 41.95 2.40
2481 3442 2.125106 GGCGAGCCGTCCATTCTT 60.125 61.111 0.00 0.00 0.00 2.52
2482 3443 2.464459 GGCGAGCCGTCCATTCTTG 61.464 63.158 0.00 0.00 0.00 3.02
2483 3444 1.741770 GCGAGCCGTCCATTCTTGT 60.742 57.895 0.00 0.00 0.00 3.16
2484 3445 1.298859 GCGAGCCGTCCATTCTTGTT 61.299 55.000 0.00 0.00 0.00 2.83
2485 3446 0.721718 CGAGCCGTCCATTCTTGTTC 59.278 55.000 0.00 0.00 0.00 3.18
2486 3447 1.673033 CGAGCCGTCCATTCTTGTTCT 60.673 52.381 0.00 0.00 0.00 3.01
2487 3448 1.734465 GAGCCGTCCATTCTTGTTCTG 59.266 52.381 0.00 0.00 0.00 3.02
2488 3449 1.072331 AGCCGTCCATTCTTGTTCTGT 59.928 47.619 0.00 0.00 0.00 3.41
2489 3450 2.301870 AGCCGTCCATTCTTGTTCTGTA 59.698 45.455 0.00 0.00 0.00 2.74
2490 3451 3.071479 GCCGTCCATTCTTGTTCTGTAA 58.929 45.455 0.00 0.00 0.00 2.41
2491 3452 3.689649 GCCGTCCATTCTTGTTCTGTAAT 59.310 43.478 0.00 0.00 0.00 1.89
2492 3453 4.156008 GCCGTCCATTCTTGTTCTGTAATT 59.844 41.667 0.00 0.00 0.00 1.40
2493 3454 5.335661 GCCGTCCATTCTTGTTCTGTAATTT 60.336 40.000 0.00 0.00 0.00 1.82
2494 3455 6.314784 CCGTCCATTCTTGTTCTGTAATTTC 58.685 40.000 0.00 0.00 0.00 2.17
2495 3456 6.149474 CCGTCCATTCTTGTTCTGTAATTTCT 59.851 38.462 0.00 0.00 0.00 2.52
2496 3457 7.308589 CCGTCCATTCTTGTTCTGTAATTTCTT 60.309 37.037 0.00 0.00 0.00 2.52
2497 3458 7.535258 CGTCCATTCTTGTTCTGTAATTTCTTG 59.465 37.037 0.00 0.00 0.00 3.02
2498 3459 7.327032 GTCCATTCTTGTTCTGTAATTTCTTGC 59.673 37.037 0.00 0.00 0.00 4.01
2499 3460 7.014134 TCCATTCTTGTTCTGTAATTTCTTGCA 59.986 33.333 0.00 0.00 0.00 4.08
2500 3461 7.327761 CCATTCTTGTTCTGTAATTTCTTGCAG 59.672 37.037 0.00 0.00 43.95 4.41
2501 3462 5.762045 TCTTGTTCTGTAATTTCTTGCAGC 58.238 37.500 0.00 0.00 42.75 5.25
2502 3463 5.299028 TCTTGTTCTGTAATTTCTTGCAGCA 59.701 36.000 0.00 0.00 42.75 4.41
2503 3464 5.512753 TGTTCTGTAATTTCTTGCAGCAA 57.487 34.783 7.81 7.81 42.75 3.91
2504 3465 6.088016 TGTTCTGTAATTTCTTGCAGCAAT 57.912 33.333 8.67 0.00 42.75 3.56
2505 3466 5.921976 TGTTCTGTAATTTCTTGCAGCAATG 59.078 36.000 8.67 3.30 42.75 2.82
2506 3467 5.710513 TCTGTAATTTCTTGCAGCAATGT 57.289 34.783 8.67 0.00 42.75 2.71
2507 3468 6.088016 TCTGTAATTTCTTGCAGCAATGTT 57.912 33.333 8.67 4.24 42.75 2.71
2508 3469 6.151691 TCTGTAATTTCTTGCAGCAATGTTC 58.848 36.000 8.67 0.00 42.75 3.18
2509 3470 5.229423 TGTAATTTCTTGCAGCAATGTTCC 58.771 37.500 8.67 0.00 0.00 3.62
2510 3471 4.612264 AATTTCTTGCAGCAATGTTCCT 57.388 36.364 8.67 0.00 0.00 3.36
2511 3472 3.374220 TTTCTTGCAGCAATGTTCCTG 57.626 42.857 8.67 0.00 0.00 3.86
2512 3473 1.985473 TCTTGCAGCAATGTTCCTGT 58.015 45.000 8.67 0.00 0.00 4.00
2513 3474 2.309613 TCTTGCAGCAATGTTCCTGTT 58.690 42.857 8.67 0.00 0.00 3.16
2514 3475 2.034939 TCTTGCAGCAATGTTCCTGTTG 59.965 45.455 8.67 0.00 0.00 3.33
2515 3476 1.401761 TGCAGCAATGTTCCTGTTGT 58.598 45.000 0.00 0.00 0.00 3.32
2516 3477 1.067364 TGCAGCAATGTTCCTGTTGTG 59.933 47.619 0.00 0.00 0.00 3.33
2517 3478 1.337703 GCAGCAATGTTCCTGTTGTGA 59.662 47.619 0.00 0.00 0.00 3.58
2518 3479 2.223782 GCAGCAATGTTCCTGTTGTGAA 60.224 45.455 0.00 0.00 0.00 3.18
2519 3480 3.737663 GCAGCAATGTTCCTGTTGTGAAA 60.738 43.478 0.00 0.00 0.00 2.69
2520 3481 3.798337 CAGCAATGTTCCTGTTGTGAAAC 59.202 43.478 0.00 0.00 37.35 2.78
2521 3482 3.123050 GCAATGTTCCTGTTGTGAAACC 58.877 45.455 0.00 0.00 34.36 3.27
2522 3483 3.181476 GCAATGTTCCTGTTGTGAAACCT 60.181 43.478 0.00 0.00 34.36 3.50
2523 3484 4.610945 CAATGTTCCTGTTGTGAAACCTC 58.389 43.478 0.00 0.00 34.36 3.85
2524 3485 3.644966 TGTTCCTGTTGTGAAACCTCT 57.355 42.857 0.00 0.00 34.36 3.69
2525 3486 3.963129 TGTTCCTGTTGTGAAACCTCTT 58.037 40.909 0.00 0.00 34.36 2.85
2526 3487 3.945285 TGTTCCTGTTGTGAAACCTCTTC 59.055 43.478 0.00 0.00 34.36 2.87
2527 3488 4.200092 GTTCCTGTTGTGAAACCTCTTCT 58.800 43.478 0.00 0.00 34.36 2.85
2528 3489 4.073293 TCCTGTTGTGAAACCTCTTCTC 57.927 45.455 0.00 0.00 34.36 2.87
2529 3490 2.802816 CCTGTTGTGAAACCTCTTCTCG 59.197 50.000 0.00 0.00 34.36 4.04
2530 3491 3.458189 CTGTTGTGAAACCTCTTCTCGT 58.542 45.455 0.00 0.00 34.36 4.18
2531 3492 3.194861 TGTTGTGAAACCTCTTCTCGTG 58.805 45.455 0.00 0.00 34.36 4.35
2532 3493 3.195661 GTTGTGAAACCTCTTCTCGTGT 58.804 45.455 0.00 0.00 34.36 4.49
2533 3494 4.142116 TGTTGTGAAACCTCTTCTCGTGTA 60.142 41.667 0.00 0.00 34.36 2.90
2534 3495 4.659111 TGTGAAACCTCTTCTCGTGTAA 57.341 40.909 0.00 0.00 34.36 2.41
2535 3496 4.365723 TGTGAAACCTCTTCTCGTGTAAC 58.634 43.478 0.00 0.00 34.36 2.50
2536 3497 4.098960 TGTGAAACCTCTTCTCGTGTAACT 59.901 41.667 0.00 0.00 34.36 2.24
2537 3498 5.048507 GTGAAACCTCTTCTCGTGTAACTT 58.951 41.667 0.00 0.00 31.75 2.66
2538 3499 5.522824 GTGAAACCTCTTCTCGTGTAACTTT 59.477 40.000 0.00 0.00 31.75 2.66
2539 3500 5.751990 TGAAACCTCTTCTCGTGTAACTTTC 59.248 40.000 0.00 0.00 31.75 2.62
2540 3501 5.532664 AACCTCTTCTCGTGTAACTTTCT 57.467 39.130 0.00 0.00 31.75 2.52
2541 3502 4.872664 ACCTCTTCTCGTGTAACTTTCTG 58.127 43.478 0.00 0.00 31.75 3.02
2542 3503 3.675698 CCTCTTCTCGTGTAACTTTCTGC 59.324 47.826 0.00 0.00 31.75 4.26
2543 3504 4.299155 CTCTTCTCGTGTAACTTTCTGCA 58.701 43.478 0.00 0.00 31.75 4.41
2544 3505 4.689071 TCTTCTCGTGTAACTTTCTGCAA 58.311 39.130 0.00 0.00 31.75 4.08
2545 3506 4.506654 TCTTCTCGTGTAACTTTCTGCAAC 59.493 41.667 0.00 0.00 31.75 4.17
2546 3507 3.787785 TCTCGTGTAACTTTCTGCAACA 58.212 40.909 0.00 0.00 31.75 3.33
2547 3508 4.185394 TCTCGTGTAACTTTCTGCAACAA 58.815 39.130 0.00 0.00 31.75 2.83
2548 3509 4.270084 TCTCGTGTAACTTTCTGCAACAAG 59.730 41.667 3.47 3.47 31.75 3.16
2549 3510 4.185394 TCGTGTAACTTTCTGCAACAAGA 58.815 39.130 10.77 4.58 31.75 3.02
2550 3511 4.270084 TCGTGTAACTTTCTGCAACAAGAG 59.730 41.667 10.77 0.00 31.75 2.85
2551 3512 4.282873 GTGTAACTTTCTGCAACAAGAGC 58.717 43.478 10.77 0.00 0.00 4.09
2552 3513 3.315191 TGTAACTTTCTGCAACAAGAGCC 59.685 43.478 10.77 0.47 0.00 4.70
2553 3514 2.057137 ACTTTCTGCAACAAGAGCCA 57.943 45.000 10.77 0.00 0.00 4.75
2554 3515 2.590821 ACTTTCTGCAACAAGAGCCAT 58.409 42.857 10.77 0.00 0.00 4.40
2555 3516 2.295349 ACTTTCTGCAACAAGAGCCATG 59.705 45.455 10.77 0.00 0.00 3.66
2556 3517 1.985473 TTCTGCAACAAGAGCCATGT 58.015 45.000 0.00 0.00 0.00 3.21
2557 3518 1.241165 TCTGCAACAAGAGCCATGTG 58.759 50.000 0.00 0.00 0.00 3.21
2558 3519 1.202794 TCTGCAACAAGAGCCATGTGA 60.203 47.619 0.00 0.00 0.00 3.58
2559 3520 0.953727 TGCAACAAGAGCCATGTGAC 59.046 50.000 0.00 0.00 0.00 3.67
2560 3521 0.953727 GCAACAAGAGCCATGTGACA 59.046 50.000 0.00 0.00 0.00 3.58
2561 3522 1.337703 GCAACAAGAGCCATGTGACAA 59.662 47.619 0.00 0.00 0.00 3.18
2562 3523 2.223782 GCAACAAGAGCCATGTGACAAA 60.224 45.455 0.00 0.00 0.00 2.83
2563 3524 3.737663 GCAACAAGAGCCATGTGACAAAA 60.738 43.478 0.00 0.00 0.00 2.44
2564 3525 4.431809 CAACAAGAGCCATGTGACAAAAA 58.568 39.130 0.00 0.00 0.00 1.94
2565 3526 4.942761 ACAAGAGCCATGTGACAAAAAT 57.057 36.364 0.00 0.00 0.00 1.82
2566 3527 4.874970 ACAAGAGCCATGTGACAAAAATC 58.125 39.130 0.00 0.00 0.00 2.17
2567 3528 4.586001 ACAAGAGCCATGTGACAAAAATCT 59.414 37.500 0.00 0.00 0.00 2.40
2568 3529 5.159209 CAAGAGCCATGTGACAAAAATCTC 58.841 41.667 0.00 0.00 0.00 2.75
2569 3530 4.660168 AGAGCCATGTGACAAAAATCTCT 58.340 39.130 0.00 0.00 0.00 3.10
2570 3531 5.075493 AGAGCCATGTGACAAAAATCTCTT 58.925 37.500 0.00 0.00 0.00 2.85
2571 3532 5.182760 AGAGCCATGTGACAAAAATCTCTTC 59.817 40.000 0.00 0.00 0.00 2.87
2572 3533 5.075493 AGCCATGTGACAAAAATCTCTTCT 58.925 37.500 0.00 0.00 0.00 2.85
2573 3534 5.537674 AGCCATGTGACAAAAATCTCTTCTT 59.462 36.000 0.00 0.00 0.00 2.52
2574 3535 5.860716 GCCATGTGACAAAAATCTCTTCTTC 59.139 40.000 0.00 0.00 0.00 2.87
2575 3536 6.294397 GCCATGTGACAAAAATCTCTTCTTCT 60.294 38.462 0.00 0.00 0.00 2.85
2576 3537 7.303998 CCATGTGACAAAAATCTCTTCTTCTC 58.696 38.462 0.00 0.00 0.00 2.87
2577 3538 6.867662 TGTGACAAAAATCTCTTCTTCTCC 57.132 37.500 0.00 0.00 0.00 3.71
2578 3539 6.356556 TGTGACAAAAATCTCTTCTTCTCCA 58.643 36.000 0.00 0.00 0.00 3.86
2579 3540 6.828273 TGTGACAAAAATCTCTTCTTCTCCAA 59.172 34.615 0.00 0.00 0.00 3.53
2580 3541 7.503566 TGTGACAAAAATCTCTTCTTCTCCAAT 59.496 33.333 0.00 0.00 0.00 3.16
2581 3542 8.355913 GTGACAAAAATCTCTTCTTCTCCAATT 58.644 33.333 0.00 0.00 0.00 2.32
2582 3543 8.917088 TGACAAAAATCTCTTCTTCTCCAATTT 58.083 29.630 0.00 0.00 0.00 1.82
2583 3544 9.755804 GACAAAAATCTCTTCTTCTCCAATTTT 57.244 29.630 0.00 0.00 0.00 1.82
2604 3565 4.503741 TTTGCAACAAGACCTCTATTGC 57.496 40.909 0.00 13.62 44.66 3.56
2607 3568 4.503741 GCAACAAGACCTCTATTGCAAA 57.496 40.909 1.71 0.00 44.01 3.68
2608 3569 4.870363 GCAACAAGACCTCTATTGCAAAA 58.130 39.130 1.71 0.00 44.01 2.44
2609 3570 5.473039 GCAACAAGACCTCTATTGCAAAAT 58.527 37.500 1.71 0.00 44.01 1.82
2610 3571 6.620678 GCAACAAGACCTCTATTGCAAAATA 58.379 36.000 1.71 0.00 44.01 1.40
2611 3572 7.260603 GCAACAAGACCTCTATTGCAAAATAT 58.739 34.615 1.71 0.00 44.01 1.28
2612 3573 7.761249 GCAACAAGACCTCTATTGCAAAATATT 59.239 33.333 1.71 0.00 44.01 1.28
2613 3574 9.294030 CAACAAGACCTCTATTGCAAAATATTC 57.706 33.333 1.71 0.00 0.00 1.75
2614 3575 8.814038 ACAAGACCTCTATTGCAAAATATTCT 57.186 30.769 1.71 0.00 0.00 2.40
2615 3576 8.897752 ACAAGACCTCTATTGCAAAATATTCTC 58.102 33.333 1.71 0.00 0.00 2.87
2616 3577 9.118300 CAAGACCTCTATTGCAAAATATTCTCT 57.882 33.333 1.71 0.00 0.00 3.10
2617 3578 9.692325 AAGACCTCTATTGCAAAATATTCTCTT 57.308 29.630 1.71 2.20 0.00 2.85
2618 3579 9.336171 AGACCTCTATTGCAAAATATTCTCTTC 57.664 33.333 1.71 0.00 0.00 2.87
2619 3580 9.336171 GACCTCTATTGCAAAATATTCTCTTCT 57.664 33.333 1.71 0.00 0.00 2.85
2620 3581 9.692325 ACCTCTATTGCAAAATATTCTCTTCTT 57.308 29.630 1.71 0.00 0.00 2.52
2638 3599 9.725019 TCTCTTCTTTAATTTACTGCATCAAGA 57.275 29.630 0.00 0.00 0.00 3.02
2639 3600 9.766277 CTCTTCTTTAATTTACTGCATCAAGAC 57.234 33.333 0.00 0.00 0.00 3.01
2640 3601 9.283768 TCTTCTTTAATTTACTGCATCAAGACA 57.716 29.630 0.00 0.00 0.00 3.41
2641 3602 9.334693 CTTCTTTAATTTACTGCATCAAGACAC 57.665 33.333 0.00 0.00 0.00 3.67
2642 3603 7.816640 TCTTTAATTTACTGCATCAAGACACC 58.183 34.615 0.00 0.00 0.00 4.16
2643 3604 7.665559 TCTTTAATTTACTGCATCAAGACACCT 59.334 33.333 0.00 0.00 0.00 4.00
2644 3605 8.856153 TTTAATTTACTGCATCAAGACACCTA 57.144 30.769 0.00 0.00 0.00 3.08
2645 3606 9.461312 TTTAATTTACTGCATCAAGACACCTAT 57.539 29.630 0.00 0.00 0.00 2.57
2646 3607 7.944729 AATTTACTGCATCAAGACACCTATT 57.055 32.000 0.00 0.00 0.00 1.73
2647 3608 6.741992 TTTACTGCATCAAGACACCTATTG 57.258 37.500 0.00 0.00 0.00 1.90
2648 3609 3.012518 ACTGCATCAAGACACCTATTGC 58.987 45.455 0.00 0.00 0.00 3.56
2649 3610 2.009051 TGCATCAAGACACCTATTGCG 58.991 47.619 0.00 0.00 0.00 4.85
2650 3611 2.279741 GCATCAAGACACCTATTGCGA 58.720 47.619 0.00 0.00 0.00 5.10
2651 3612 2.677836 GCATCAAGACACCTATTGCGAA 59.322 45.455 0.00 0.00 0.00 4.70
2652 3613 3.126858 GCATCAAGACACCTATTGCGAAA 59.873 43.478 0.00 0.00 0.00 3.46
2653 3614 4.651994 CATCAAGACACCTATTGCGAAAC 58.348 43.478 0.00 0.00 0.00 2.78
2654 3615 4.002906 TCAAGACACCTATTGCGAAACT 57.997 40.909 0.00 0.00 0.00 2.66
2655 3616 4.385825 TCAAGACACCTATTGCGAAACTT 58.614 39.130 0.00 0.00 0.00 2.66
2656 3617 4.819630 TCAAGACACCTATTGCGAAACTTT 59.180 37.500 0.00 0.00 0.00 2.66
2657 3618 5.298276 TCAAGACACCTATTGCGAAACTTTT 59.702 36.000 0.00 0.00 0.00 2.27
2658 3619 5.767816 AGACACCTATTGCGAAACTTTTT 57.232 34.783 0.00 0.00 0.00 1.94
2659 3620 5.758924 AGACACCTATTGCGAAACTTTTTC 58.241 37.500 0.00 0.00 0.00 2.29
2660 3621 5.531287 AGACACCTATTGCGAAACTTTTTCT 59.469 36.000 0.00 0.00 0.00 2.52
2661 3622 5.758924 ACACCTATTGCGAAACTTTTTCTC 58.241 37.500 0.00 0.00 0.00 2.87
2662 3623 5.531287 ACACCTATTGCGAAACTTTTTCTCT 59.469 36.000 0.00 0.00 0.00 3.10
2663 3624 6.080406 CACCTATTGCGAAACTTTTTCTCTC 58.920 40.000 0.00 0.00 0.00 3.20
2664 3625 5.998363 ACCTATTGCGAAACTTTTTCTCTCT 59.002 36.000 0.00 0.00 0.00 3.10
2665 3626 7.117812 CACCTATTGCGAAACTTTTTCTCTCTA 59.882 37.037 0.00 0.00 0.00 2.43
2666 3627 7.824779 ACCTATTGCGAAACTTTTTCTCTCTAT 59.175 33.333 0.00 0.00 0.00 1.98
2667 3628 8.669243 CCTATTGCGAAACTTTTTCTCTCTATT 58.331 33.333 0.00 0.00 0.00 1.73
2670 3631 9.750125 ATTGCGAAACTTTTTCTCTCTATTTTT 57.250 25.926 0.00 0.00 0.00 1.94
2671 3632 8.782533 TGCGAAACTTTTTCTCTCTATTTTTC 57.217 30.769 0.00 0.00 0.00 2.29
2672 3633 8.621286 TGCGAAACTTTTTCTCTCTATTTTTCT 58.379 29.630 0.00 0.00 0.00 2.52
2673 3634 8.896826 GCGAAACTTTTTCTCTCTATTTTTCTG 58.103 33.333 0.00 0.00 0.00 3.02
2674 3635 8.896826 CGAAACTTTTTCTCTCTATTTTTCTGC 58.103 33.333 0.00 0.00 0.00 4.26
2675 3636 9.736023 GAAACTTTTTCTCTCTATTTTTCTGCA 57.264 29.630 0.00 0.00 0.00 4.41
2677 3638 9.521503 AACTTTTTCTCTCTATTTTTCTGCAAC 57.478 29.630 0.00 0.00 0.00 4.17
2678 3639 8.686334 ACTTTTTCTCTCTATTTTTCTGCAACA 58.314 29.630 0.00 0.00 0.00 3.33
2679 3640 9.520204 CTTTTTCTCTCTATTTTTCTGCAACAA 57.480 29.630 0.00 0.00 0.00 2.83
2680 3641 9.520204 TTTTTCTCTCTATTTTTCTGCAACAAG 57.480 29.630 0.00 0.00 0.00 3.16
2681 3642 8.450578 TTTCTCTCTATTTTTCTGCAACAAGA 57.549 30.769 0.00 0.00 0.00 3.02
2682 3643 7.426929 TCTCTCTATTTTTCTGCAACAAGAC 57.573 36.000 0.00 0.00 0.00 3.01
2683 3644 6.428159 TCTCTCTATTTTTCTGCAACAAGACC 59.572 38.462 0.00 0.00 0.00 3.85
2684 3645 5.473504 TCTCTATTTTTCTGCAACAAGACCC 59.526 40.000 0.00 0.00 0.00 4.46
2685 3646 5.385198 TCTATTTTTCTGCAACAAGACCCT 58.615 37.500 0.00 0.00 0.00 4.34
2686 3647 5.833131 TCTATTTTTCTGCAACAAGACCCTT 59.167 36.000 0.00 0.00 0.00 3.95
2687 3648 3.799281 TTTTCTGCAACAAGACCCTTG 57.201 42.857 5.26 5.26 0.00 3.61
2688 3649 2.727123 TTCTGCAACAAGACCCTTGA 57.273 45.000 13.00 0.00 0.00 3.02
2689 3650 2.957402 TCTGCAACAAGACCCTTGAT 57.043 45.000 13.00 0.00 0.00 2.57
2690 3651 2.507484 TCTGCAACAAGACCCTTGATG 58.493 47.619 13.00 11.98 0.00 3.07
2691 3652 2.158623 TCTGCAACAAGACCCTTGATGT 60.159 45.455 13.00 0.00 0.00 3.06
2692 3653 3.072330 TCTGCAACAAGACCCTTGATGTA 59.928 43.478 13.00 9.84 0.00 2.29
2693 3654 3.820467 CTGCAACAAGACCCTTGATGTAA 59.180 43.478 13.00 4.65 0.00 2.41
2694 3655 4.211125 TGCAACAAGACCCTTGATGTAAA 58.789 39.130 13.00 0.96 0.00 2.01
2695 3656 4.646945 TGCAACAAGACCCTTGATGTAAAA 59.353 37.500 13.00 0.00 0.00 1.52
2696 3657 4.982295 GCAACAAGACCCTTGATGTAAAAC 59.018 41.667 13.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 6.930731 ACACTGTCTTTAAAATGTGTGGTTT 58.069 32.000 11.66 0.00 37.28 3.27
62 63 4.729458 GCGCAACTGACACTGTCTTTAAAA 60.729 41.667 0.30 0.00 33.15 1.52
71 72 2.546321 GACGCGCAACTGACACTG 59.454 61.111 5.73 0.00 0.00 3.66
74 75 2.278923 TTCGACGCGCAACTGACA 60.279 55.556 5.73 0.00 0.00 3.58
84 85 3.455685 CGTGTTACCCTTCGACGC 58.544 61.111 0.00 0.00 0.00 5.19
95 96 1.001974 AGCTTGTGATCCAGCGTGTTA 59.998 47.619 3.67 0.00 0.00 2.41
99 100 2.698855 ATAAGCTTGTGATCCAGCGT 57.301 45.000 9.86 3.49 0.00 5.07
120 121 2.597805 ACGCTCTGGACGGTCTGT 60.598 61.111 8.23 0.00 34.00 3.41
122 123 3.063084 GGACGCTCTGGACGGTCT 61.063 66.667 8.23 0.00 34.00 3.85
150 151 0.543410 TTAGGTGGCTCTCCGTTGGA 60.543 55.000 0.00 0.00 34.14 3.53
178 179 4.650377 GCCCATCCCTCCATCGGC 62.650 72.222 0.00 0.00 0.00 5.54
183 184 1.009997 AAATTCAGCCCATCCCTCCA 58.990 50.000 0.00 0.00 0.00 3.86
186 187 0.106519 CGGAAATTCAGCCCATCCCT 60.107 55.000 0.00 0.00 0.00 4.20
194 195 1.339151 ACCTCCTCACGGAAATTCAGC 60.339 52.381 0.00 0.00 39.29 4.26
246 247 1.662122 AGTTGTTTTCGCGAAGTCGTT 59.338 42.857 22.21 4.92 42.22 3.85
250 251 1.658994 TGGAGTTGTTTTCGCGAAGT 58.341 45.000 22.21 2.79 0.00 3.01
252 253 2.678836 TCTTTGGAGTTGTTTTCGCGAA 59.321 40.909 19.38 19.38 0.00 4.70
255 256 5.727249 CAATTTCTTTGGAGTTGTTTTCGC 58.273 37.500 0.00 0.00 0.00 4.70
285 286 6.509418 AACCACATATTCTTTGCGTGTATT 57.491 33.333 0.00 0.00 0.00 1.89
287 288 4.092237 CGAACCACATATTCTTTGCGTGTA 59.908 41.667 0.00 0.00 0.00 2.90
312 313 1.417890 CCCCTCTGTGGTATGATGGAC 59.582 57.143 0.00 0.00 0.00 4.02
316 317 2.119495 GTGTCCCCTCTGTGGTATGAT 58.881 52.381 0.00 0.00 0.00 2.45
317 318 1.203250 TGTGTCCCCTCTGTGGTATGA 60.203 52.381 0.00 0.00 0.00 2.15
320 321 1.568504 GATGTGTCCCCTCTGTGGTA 58.431 55.000 0.00 0.00 0.00 3.25
321 322 1.201429 GGATGTGTCCCCTCTGTGGT 61.201 60.000 0.00 0.00 38.69 4.16
322 323 1.604378 GGATGTGTCCCCTCTGTGG 59.396 63.158 0.00 0.00 38.69 4.17
345 349 0.693622 TCAAACGTAATGGCCCTGGA 59.306 50.000 0.00 0.00 0.00 3.86
398 402 3.569491 AGGATATTCTTGTGGCAATGGG 58.431 45.455 0.00 0.00 0.00 4.00
409 413 5.075493 CAAGGCAGCCATTAGGATATTCTT 58.925 41.667 15.80 0.00 36.89 2.52
420 424 0.681175 GTTTGTCCAAGGCAGCCATT 59.319 50.000 15.80 1.93 0.00 3.16
423 427 0.244721 GATGTTTGTCCAAGGCAGCC 59.755 55.000 1.84 1.84 0.00 4.85
424 428 1.068055 CAGATGTTTGTCCAAGGCAGC 60.068 52.381 0.00 0.00 0.00 5.25
425 429 1.068055 GCAGATGTTTGTCCAAGGCAG 60.068 52.381 0.00 0.00 0.00 4.85
426 430 0.961019 GCAGATGTTTGTCCAAGGCA 59.039 50.000 0.00 0.00 0.00 4.75
438 1215 4.415150 CCGTGGCAGGGCAGATGT 62.415 66.667 14.01 0.00 0.00 3.06
467 1244 4.378459 GCCACGTCAGATTTTGAAACTAGG 60.378 45.833 0.00 0.00 37.61 3.02
468 1245 4.213270 TGCCACGTCAGATTTTGAAACTAG 59.787 41.667 0.00 0.00 37.61 2.57
469 1246 4.024387 GTGCCACGTCAGATTTTGAAACTA 60.024 41.667 0.00 0.00 37.61 2.24
470 1247 2.948979 TGCCACGTCAGATTTTGAAACT 59.051 40.909 0.00 0.00 37.61 2.66
471 1248 3.042887 GTGCCACGTCAGATTTTGAAAC 58.957 45.455 0.00 0.00 37.61 2.78
472 1249 2.034053 GGTGCCACGTCAGATTTTGAAA 59.966 45.455 0.00 0.00 37.61 2.69
473 1250 1.606668 GGTGCCACGTCAGATTTTGAA 59.393 47.619 0.00 0.00 37.61 2.69
474 1251 1.234821 GGTGCCACGTCAGATTTTGA 58.765 50.000 0.00 0.00 0.00 2.69
475 1252 0.110238 CGGTGCCACGTCAGATTTTG 60.110 55.000 0.00 0.00 0.00 2.44
476 1253 1.234615 CCGGTGCCACGTCAGATTTT 61.235 55.000 0.00 0.00 0.00 1.82
477 1254 1.671054 CCGGTGCCACGTCAGATTT 60.671 57.895 0.00 0.00 0.00 2.17
478 1255 2.047274 CCGGTGCCACGTCAGATT 60.047 61.111 0.00 0.00 0.00 2.40
479 1256 3.296709 GACCGGTGCCACGTCAGAT 62.297 63.158 14.63 0.00 0.00 2.90
480 1257 3.986006 GACCGGTGCCACGTCAGA 61.986 66.667 14.63 0.00 0.00 3.27
494 1271 2.501610 GGATCTCGGTGCAGGACC 59.498 66.667 0.00 0.00 42.07 4.46
495 1272 2.105128 CGGATCTCGGTGCAGGAC 59.895 66.667 0.00 0.00 34.75 3.85
496 1273 2.362503 ACGGATCTCGGTGCAGGA 60.363 61.111 8.20 0.00 44.45 3.86
497 1274 2.202797 CACGGATCTCGGTGCAGG 60.203 66.667 5.15 0.00 44.45 4.85
501 1278 1.431488 CCATTGCACGGATCTCGGTG 61.431 60.000 12.13 12.13 46.08 4.94
502 1279 1.153369 CCATTGCACGGATCTCGGT 60.153 57.895 8.20 0.00 44.45 4.69
503 1280 1.153369 ACCATTGCACGGATCTCGG 60.153 57.895 8.35 0.00 44.45 4.63
504 1281 1.431488 CCACCATTGCACGGATCTCG 61.431 60.000 8.35 0.00 45.88 4.04
505 1282 1.097547 CCCACCATTGCACGGATCTC 61.098 60.000 8.35 0.00 0.00 2.75
506 1283 1.077501 CCCACCATTGCACGGATCT 60.078 57.895 8.35 0.00 0.00 2.75
507 1284 2.120909 CCCCACCATTGCACGGATC 61.121 63.158 8.35 0.00 0.00 3.36
508 1285 2.044053 CCCCACCATTGCACGGAT 60.044 61.111 8.35 0.00 0.00 4.18
509 1286 3.253061 TCCCCACCATTGCACGGA 61.253 61.111 8.35 0.00 0.00 4.69
510 1287 2.751436 CTCCCCACCATTGCACGG 60.751 66.667 0.00 0.00 0.00 4.94
511 1288 1.746615 CTCTCCCCACCATTGCACG 60.747 63.158 0.00 0.00 0.00 5.34
512 1289 0.962356 CACTCTCCCCACCATTGCAC 60.962 60.000 0.00 0.00 0.00 4.57
513 1290 1.379916 CACTCTCCCCACCATTGCA 59.620 57.895 0.00 0.00 0.00 4.08
514 1291 0.251341 AACACTCTCCCCACCATTGC 60.251 55.000 0.00 0.00 0.00 3.56
515 1292 1.073763 TGAACACTCTCCCCACCATTG 59.926 52.381 0.00 0.00 0.00 2.82
516 1293 1.073923 GTGAACACTCTCCCCACCATT 59.926 52.381 0.00 0.00 0.00 3.16
517 1294 0.693049 GTGAACACTCTCCCCACCAT 59.307 55.000 0.00 0.00 0.00 3.55
518 1295 0.399949 AGTGAACACTCTCCCCACCA 60.400 55.000 1.32 0.00 36.92 4.17
519 1296 0.035458 CAGTGAACACTCTCCCCACC 59.965 60.000 4.38 0.00 40.20 4.61
520 1297 0.035458 CCAGTGAACACTCTCCCCAC 59.965 60.000 4.38 0.00 40.20 4.61
521 1298 0.105194 TCCAGTGAACACTCTCCCCA 60.105 55.000 4.38 0.00 40.20 4.96
522 1299 0.610687 CTCCAGTGAACACTCTCCCC 59.389 60.000 4.38 0.00 40.20 4.81
523 1300 1.633774 TCTCCAGTGAACACTCTCCC 58.366 55.000 4.38 0.00 40.20 4.30
524 1301 2.828520 TGATCTCCAGTGAACACTCTCC 59.171 50.000 4.38 0.00 40.20 3.71
525 1302 4.159321 TGATGATCTCCAGTGAACACTCTC 59.841 45.833 4.38 0.00 40.20 3.20
526 1303 4.092279 TGATGATCTCCAGTGAACACTCT 58.908 43.478 4.38 0.00 40.20 3.24
527 1304 4.462508 TGATGATCTCCAGTGAACACTC 57.537 45.455 4.38 0.00 40.20 3.51
528 1305 4.897509 TTGATGATCTCCAGTGAACACT 57.102 40.909 1.32 1.32 43.61 3.55
529 1306 7.041508 GGATATTTGATGATCTCCAGTGAACAC 60.042 40.741 0.00 0.00 0.00 3.32
530 1307 6.994496 GGATATTTGATGATCTCCAGTGAACA 59.006 38.462 0.00 0.00 0.00 3.18
531 1308 6.146837 CGGATATTTGATGATCTCCAGTGAAC 59.853 42.308 0.00 0.00 0.00 3.18
532 1309 6.226052 CGGATATTTGATGATCTCCAGTGAA 58.774 40.000 0.00 0.00 0.00 3.18
533 1310 5.279657 CCGGATATTTGATGATCTCCAGTGA 60.280 44.000 0.00 0.00 0.00 3.41
534 1311 4.934001 CCGGATATTTGATGATCTCCAGTG 59.066 45.833 0.00 0.00 0.00 3.66
535 1312 4.564406 GCCGGATATTTGATGATCTCCAGT 60.564 45.833 5.05 0.00 0.00 4.00
536 1313 3.937706 GCCGGATATTTGATGATCTCCAG 59.062 47.826 5.05 0.00 0.00 3.86
537 1314 3.617288 CGCCGGATATTTGATGATCTCCA 60.617 47.826 5.05 0.00 0.00 3.86
538 1315 2.932614 CGCCGGATATTTGATGATCTCC 59.067 50.000 5.05 0.00 0.00 3.71
539 1316 3.589988 ACGCCGGATATTTGATGATCTC 58.410 45.455 5.05 0.00 0.00 2.75
540 1317 3.685139 ACGCCGGATATTTGATGATCT 57.315 42.857 5.05 0.00 0.00 2.75
541 1318 3.181530 CGAACGCCGGATATTTGATGATC 60.182 47.826 5.05 0.00 33.91 2.92
542 1319 2.736721 CGAACGCCGGATATTTGATGAT 59.263 45.455 5.05 0.00 33.91 2.45
543 1320 2.131972 CGAACGCCGGATATTTGATGA 58.868 47.619 5.05 0.00 33.91 2.92
544 1321 2.131972 TCGAACGCCGGATATTTGATG 58.868 47.619 5.05 0.00 39.14 3.07
545 1322 2.404215 CTCGAACGCCGGATATTTGAT 58.596 47.619 5.05 0.00 39.14 2.57
546 1323 1.847818 CTCGAACGCCGGATATTTGA 58.152 50.000 5.05 3.99 39.14 2.69
547 1324 0.232303 GCTCGAACGCCGGATATTTG 59.768 55.000 5.05 0.00 39.14 2.32
548 1325 0.878961 GGCTCGAACGCCGGATATTT 60.879 55.000 5.05 0.00 40.79 1.40
549 1326 1.300697 GGCTCGAACGCCGGATATT 60.301 57.895 5.05 0.00 40.79 1.28
550 1327 2.338984 GGCTCGAACGCCGGATAT 59.661 61.111 5.05 0.00 40.79 1.63
556 1333 2.270297 TAGTAACCGGCTCGAACGCC 62.270 60.000 0.00 5.62 46.68 5.68
557 1334 0.248784 ATAGTAACCGGCTCGAACGC 60.249 55.000 0.00 0.00 0.00 4.84
558 1335 2.199291 AATAGTAACCGGCTCGAACG 57.801 50.000 0.00 2.46 0.00 3.95
559 1336 2.862536 GGAAATAGTAACCGGCTCGAAC 59.137 50.000 0.00 0.00 0.00 3.95
560 1337 2.496871 TGGAAATAGTAACCGGCTCGAA 59.503 45.455 0.00 0.00 0.00 3.71
561 1338 2.101783 TGGAAATAGTAACCGGCTCGA 58.898 47.619 0.00 0.00 0.00 4.04
562 1339 2.589798 TGGAAATAGTAACCGGCTCG 57.410 50.000 0.00 0.00 0.00 5.03
563 1340 4.039366 AGAGATGGAAATAGTAACCGGCTC 59.961 45.833 0.00 0.00 0.00 4.70
564 1341 3.967987 AGAGATGGAAATAGTAACCGGCT 59.032 43.478 0.00 0.00 0.00 5.52
565 1342 4.338379 AGAGATGGAAATAGTAACCGGC 57.662 45.455 0.00 0.00 0.00 6.13
566 1343 8.148351 TCATTTAGAGATGGAAATAGTAACCGG 58.852 37.037 0.00 0.00 0.00 5.28
567 1344 9.712305 ATCATTTAGAGATGGAAATAGTAACCG 57.288 33.333 0.00 0.00 0.00 4.44
572 1349 8.985315 TTGCATCATTTAGAGATGGAAATAGT 57.015 30.769 7.49 0.00 46.27 2.12
577 1354 4.581824 GGCTTGCATCATTTAGAGATGGAA 59.418 41.667 9.23 9.23 46.81 3.53
578 1355 4.139786 GGCTTGCATCATTTAGAGATGGA 58.860 43.478 5.45 0.00 42.38 3.41
579 1356 3.058432 CGGCTTGCATCATTTAGAGATGG 60.058 47.826 5.45 0.00 42.38 3.51
580 1357 3.562973 ACGGCTTGCATCATTTAGAGATG 59.437 43.478 0.00 0.00 44.38 2.90
581 1358 3.562973 CACGGCTTGCATCATTTAGAGAT 59.437 43.478 0.00 0.00 0.00 2.75
582 1359 2.938451 CACGGCTTGCATCATTTAGAGA 59.062 45.455 0.00 0.00 0.00 3.10
583 1360 2.679837 ACACGGCTTGCATCATTTAGAG 59.320 45.455 0.00 0.00 0.00 2.43
584 1361 2.710377 ACACGGCTTGCATCATTTAGA 58.290 42.857 0.00 0.00 0.00 2.10
585 1362 3.173599 CAACACGGCTTGCATCATTTAG 58.826 45.455 0.00 0.00 0.00 1.85
586 1363 2.670789 GCAACACGGCTTGCATCATTTA 60.671 45.455 12.90 0.00 45.07 1.40
587 1364 1.936203 GCAACACGGCTTGCATCATTT 60.936 47.619 12.90 0.00 45.07 2.32
588 1365 0.388907 GCAACACGGCTTGCATCATT 60.389 50.000 12.90 0.00 45.07 2.57
589 1366 1.213537 GCAACACGGCTTGCATCAT 59.786 52.632 12.90 0.00 45.07 2.45
590 1367 2.644418 GCAACACGGCTTGCATCA 59.356 55.556 12.90 0.00 45.07 3.07
594 1371 0.526096 CCATATGCAACACGGCTTGC 60.526 55.000 11.32 11.32 45.80 4.01
595 1372 0.526096 GCCATATGCAACACGGCTTG 60.526 55.000 11.36 0.00 39.73 4.01
596 1373 1.666209 GGCCATATGCAACACGGCTT 61.666 55.000 16.40 0.00 43.89 4.35
597 1374 2.120909 GGCCATATGCAACACGGCT 61.121 57.895 16.40 0.00 43.89 5.52
598 1375 1.737355 ATGGCCATATGCAACACGGC 61.737 55.000 19.18 10.43 43.89 5.68
599 1376 0.746063 AATGGCCATATGCAACACGG 59.254 50.000 21.15 0.00 43.89 4.94
600 1377 1.134753 ACAATGGCCATATGCAACACG 59.865 47.619 21.15 1.85 43.89 4.49
601 1378 2.542597 CACAATGGCCATATGCAACAC 58.457 47.619 21.15 0.00 43.89 3.32
602 1379 1.134759 GCACAATGGCCATATGCAACA 60.135 47.619 34.24 3.21 43.89 3.33
603 1380 1.574134 GCACAATGGCCATATGCAAC 58.426 50.000 34.24 18.18 43.89 4.17
617 1394 8.079203 CTGTTTATAATACACAGTTTGGCACAA 58.921 33.333 7.39 0.00 37.35 3.33
618 1395 7.445707 TCTGTTTATAATACACAGTTTGGCACA 59.554 33.333 13.09 0.00 39.24 4.57
619 1396 7.749126 GTCTGTTTATAATACACAGTTTGGCAC 59.251 37.037 13.09 2.99 39.24 5.01
620 1397 7.663905 AGTCTGTTTATAATACACAGTTTGGCA 59.336 33.333 13.09 0.00 39.24 4.92
621 1398 8.040716 AGTCTGTTTATAATACACAGTTTGGC 57.959 34.615 13.09 3.89 39.24 4.52
657 1434 3.854994 AGTTCTGGGATTCCAAAGGATCT 59.145 43.478 4.80 0.00 43.51 2.75
662 1439 5.165961 TCAGTAGTTCTGGGATTCCAAAG 57.834 43.478 4.80 1.71 43.51 2.77
679 1456 2.584064 CCCGGCTGCACATCAGTA 59.416 61.111 0.50 0.00 44.66 2.74
856 1635 3.761897 TGGGTTACAATTGGAGACCTTG 58.238 45.455 19.83 0.00 0.00 3.61
857 1636 4.141018 AGTTGGGTTACAATTGGAGACCTT 60.141 41.667 19.83 7.25 41.95 3.50
1041 1830 1.911057 AGGAAAGCCAGCTAAACCAC 58.089 50.000 0.00 0.00 36.29 4.16
1063 1852 0.815734 ACCGTACCGACTCCAATCAG 59.184 55.000 0.00 0.00 0.00 2.90
1088 1877 4.133820 TGCAAAAACGATCTTGAGAAGGA 58.866 39.130 0.00 0.00 0.00 3.36
1096 1885 7.144722 TGATTACAGATGCAAAAACGATCTT 57.855 32.000 0.00 0.00 0.00 2.40
1097 1886 6.741992 TGATTACAGATGCAAAAACGATCT 57.258 33.333 0.00 0.00 0.00 2.75
1098 1887 7.188834 TGATGATTACAGATGCAAAAACGATC 58.811 34.615 0.00 0.00 0.00 3.69
1099 1888 7.087409 TGATGATTACAGATGCAAAAACGAT 57.913 32.000 0.00 0.00 0.00 3.73
1100 1889 6.493449 TGATGATTACAGATGCAAAAACGA 57.507 33.333 0.00 0.00 0.00 3.85
1102 1891 8.804743 CAGATTGATGATTACAGATGCAAAAAC 58.195 33.333 0.00 0.00 0.00 2.43
1137 1936 9.000018 GCTTGTATAAAGCGAAAAATACAGAAG 58.000 33.333 0.00 0.00 36.48 2.85
1207 2007 2.806608 AAGAACTCCTGAACGCGTTA 57.193 45.000 26.68 8.39 0.00 3.18
1361 2161 0.609131 GACACCACCACCTTCCCATG 60.609 60.000 0.00 0.00 0.00 3.66
1499 2302 4.803426 CTCCACGCGCCTCCTCAC 62.803 72.222 5.73 0.00 0.00 3.51
1537 2340 2.202518 TCGACGTCGAATTCCGCC 60.203 61.111 36.25 0.00 46.30 6.13
1552 2355 3.121030 CGGAACAGCTTGGCCTCG 61.121 66.667 3.32 0.00 0.00 4.63
1702 2505 1.279527 GCTGCACGCACGTAGTACAA 61.280 55.000 0.38 0.00 41.61 2.41
1705 2508 2.646143 TGCTGCACGCACGTAGTA 59.354 55.556 0.00 0.00 45.47 1.82
1770 2592 5.948742 TGAGAAACTTGGGGAACAAAAAT 57.051 34.783 0.00 0.00 38.91 1.82
1894 2724 3.935818 TGGTCAAACCAGGTCAAACTA 57.064 42.857 0.00 0.00 44.79 2.24
1992 2883 1.106351 AACGCACCCAAGCATGTTGA 61.106 50.000 8.90 0.00 0.00 3.18
2034 2928 5.033589 AGAGCTCCTCAGATGTTATTTGG 57.966 43.478 10.93 0.00 32.06 3.28
2106 3018 2.136298 TTCGACATCTGAGGAGCTCT 57.864 50.000 14.64 0.00 0.00 4.09
2244 3197 2.228822 CAGATTTTAAGCACGTTGGCCT 59.771 45.455 3.32 0.00 0.00 5.19
2348 3309 3.680777 TTTTGGTCCCTCAAGTTTCCT 57.319 42.857 0.00 0.00 0.00 3.36
2395 3356 3.264897 GGCCGACGCATAGCACTG 61.265 66.667 0.00 0.00 36.38 3.66
2396 3357 4.873129 CGGCCGACGCATAGCACT 62.873 66.667 24.07 0.00 36.38 4.40
2397 3358 4.865761 TCGGCCGACGCATAGCAC 62.866 66.667 27.28 0.00 43.86 4.40
2398 3359 4.136511 TTCGGCCGACGCATAGCA 62.137 61.111 31.19 7.76 43.86 3.49
2399 3360 3.330853 CTTCGGCCGACGCATAGC 61.331 66.667 31.19 0.00 43.86 2.97
2400 3361 2.421877 ATCCTTCGGCCGACGCATAG 62.422 60.000 31.19 22.07 43.86 2.23
2401 3362 2.416244 GATCCTTCGGCCGACGCATA 62.416 60.000 31.19 12.53 43.86 3.14
2402 3363 3.792053 GATCCTTCGGCCGACGCAT 62.792 63.158 31.19 19.40 43.86 4.73
2403 3364 4.508128 GATCCTTCGGCCGACGCA 62.508 66.667 31.19 14.09 43.86 5.24
2404 3365 3.718210 AAGATCCTTCGGCCGACGC 62.718 63.158 31.19 13.62 43.86 5.19
2405 3366 0.739813 AAAAGATCCTTCGGCCGACG 60.740 55.000 31.19 27.09 46.11 5.12
2406 3367 2.304751 TAAAAGATCCTTCGGCCGAC 57.695 50.000 31.19 16.71 0.00 4.79
2407 3368 3.337694 TTTAAAAGATCCTTCGGCCGA 57.662 42.857 27.28 27.28 0.00 5.54
2408 3369 4.155280 TCTTTTTAAAAGATCCTTCGGCCG 59.845 41.667 22.12 22.12 0.00 6.13
2409 3370 5.399858 GTCTTTTTAAAAGATCCTTCGGCC 58.600 41.667 20.94 0.00 0.00 6.13
2410 3371 5.399858 GGTCTTTTTAAAAGATCCTTCGGC 58.600 41.667 20.94 7.45 0.00 5.54
2411 3372 5.391629 CGGGTCTTTTTAAAAGATCCTTCGG 60.392 44.000 33.57 21.17 43.72 4.30
2412 3373 5.628134 CGGGTCTTTTTAAAAGATCCTTCG 58.372 41.667 33.57 22.71 43.72 3.79
2413 3374 5.183331 AGCGGGTCTTTTTAAAAGATCCTTC 59.817 40.000 33.57 26.86 43.72 3.46
2414 3375 5.048013 CAGCGGGTCTTTTTAAAAGATCCTT 60.048 40.000 33.57 23.84 43.72 3.36
2415 3376 4.459337 CAGCGGGTCTTTTTAAAAGATCCT 59.541 41.667 33.57 21.00 43.72 3.24
2416 3377 4.733850 CAGCGGGTCTTTTTAAAAGATCC 58.266 43.478 29.98 29.98 42.73 3.36
2417 3378 4.166523 GCAGCGGGTCTTTTTAAAAGATC 58.833 43.478 20.94 20.07 0.00 2.75
2418 3379 3.056821 GGCAGCGGGTCTTTTTAAAAGAT 60.057 43.478 20.94 4.32 0.00 2.40
2419 3380 2.295070 GGCAGCGGGTCTTTTTAAAAGA 59.705 45.455 15.24 15.24 0.00 2.52
2420 3381 2.296190 AGGCAGCGGGTCTTTTTAAAAG 59.704 45.455 10.89 10.89 0.00 2.27
2421 3382 2.295070 GAGGCAGCGGGTCTTTTTAAAA 59.705 45.455 0.00 0.00 0.00 1.52
2422 3383 1.883926 GAGGCAGCGGGTCTTTTTAAA 59.116 47.619 0.00 0.00 0.00 1.52
2423 3384 1.530323 GAGGCAGCGGGTCTTTTTAA 58.470 50.000 0.00 0.00 0.00 1.52
2424 3385 0.672401 CGAGGCAGCGGGTCTTTTTA 60.672 55.000 0.00 0.00 0.00 1.52
2425 3386 1.966451 CGAGGCAGCGGGTCTTTTT 60.966 57.895 0.00 0.00 0.00 1.94
2426 3387 2.358737 CGAGGCAGCGGGTCTTTT 60.359 61.111 0.00 0.00 0.00 2.27
2427 3388 3.626924 ACGAGGCAGCGGGTCTTT 61.627 61.111 4.86 0.00 35.12 2.52
2428 3389 4.379243 CACGAGGCAGCGGGTCTT 62.379 66.667 4.86 0.00 35.12 3.01
2430 3391 4.803426 CTCACGAGGCAGCGGGTC 62.803 72.222 2.09 0.00 35.83 4.46
2443 3404 1.135199 TCTTACAATCGGACGGCTCAC 60.135 52.381 0.00 0.00 0.00 3.51
2444 3405 1.134367 CTCTTACAATCGGACGGCTCA 59.866 52.381 0.00 0.00 0.00 4.26
2445 3406 1.536284 CCTCTTACAATCGGACGGCTC 60.536 57.143 0.00 0.00 0.00 4.70
2446 3407 0.460311 CCTCTTACAATCGGACGGCT 59.540 55.000 0.00 0.00 0.00 5.52
2447 3408 1.152383 GCCTCTTACAATCGGACGGC 61.152 60.000 0.00 0.00 0.00 5.68
2448 3409 0.870307 CGCCTCTTACAATCGGACGG 60.870 60.000 0.00 0.00 0.00 4.79
2449 3410 0.099968 TCGCCTCTTACAATCGGACG 59.900 55.000 0.00 0.00 0.00 4.79
2450 3411 1.841450 CTCGCCTCTTACAATCGGAC 58.159 55.000 0.00 0.00 0.00 4.79
2451 3412 0.102481 GCTCGCCTCTTACAATCGGA 59.898 55.000 0.00 0.00 0.00 4.55
2452 3413 0.876342 GGCTCGCCTCTTACAATCGG 60.876 60.000 0.00 0.00 0.00 4.18
2453 3414 1.209275 CGGCTCGCCTCTTACAATCG 61.209 60.000 6.35 0.00 0.00 3.34
2454 3415 0.179108 ACGGCTCGCCTCTTACAATC 60.179 55.000 6.35 0.00 0.00 2.67
2455 3416 0.179108 GACGGCTCGCCTCTTACAAT 60.179 55.000 6.35 0.00 0.00 2.71
2456 3417 1.214589 GACGGCTCGCCTCTTACAA 59.785 57.895 6.35 0.00 0.00 2.41
2457 3418 2.707849 GGACGGCTCGCCTCTTACA 61.708 63.158 6.35 0.00 0.00 2.41
2458 3419 2.017559 ATGGACGGCTCGCCTCTTAC 62.018 60.000 6.35 0.00 0.00 2.34
2459 3420 1.327690 AATGGACGGCTCGCCTCTTA 61.328 55.000 6.35 0.00 0.00 2.10
2460 3421 2.579684 GAATGGACGGCTCGCCTCTT 62.580 60.000 6.35 0.00 0.00 2.85
2461 3422 3.077556 AATGGACGGCTCGCCTCT 61.078 61.111 6.35 0.00 0.00 3.69
2462 3423 2.579684 AAGAATGGACGGCTCGCCTC 62.580 60.000 6.35 3.00 0.00 4.70
2463 3424 2.660064 AAGAATGGACGGCTCGCCT 61.660 57.895 6.35 0.00 0.00 5.52
2464 3425 2.125106 AAGAATGGACGGCTCGCC 60.125 61.111 0.00 0.00 0.00 5.54
2465 3426 1.298859 AACAAGAATGGACGGCTCGC 61.299 55.000 0.00 0.00 0.00 5.03
2466 3427 0.721718 GAACAAGAATGGACGGCTCG 59.278 55.000 0.00 0.00 0.00 5.03
2467 3428 1.734465 CAGAACAAGAATGGACGGCTC 59.266 52.381 0.00 0.00 0.00 4.70
2468 3429 1.072331 ACAGAACAAGAATGGACGGCT 59.928 47.619 0.00 0.00 0.00 5.52
2469 3430 1.523758 ACAGAACAAGAATGGACGGC 58.476 50.000 0.00 0.00 0.00 5.68
2470 3431 5.880054 AATTACAGAACAAGAATGGACGG 57.120 39.130 0.00 0.00 0.00 4.79
2471 3432 7.133891 AGAAATTACAGAACAAGAATGGACG 57.866 36.000 0.00 0.00 0.00 4.79
2472 3433 7.327032 GCAAGAAATTACAGAACAAGAATGGAC 59.673 37.037 0.00 0.00 0.00 4.02
2473 3434 7.014134 TGCAAGAAATTACAGAACAAGAATGGA 59.986 33.333 0.00 0.00 0.00 3.41
2474 3435 7.147312 TGCAAGAAATTACAGAACAAGAATGG 58.853 34.615 0.00 0.00 0.00 3.16
2475 3436 7.148853 GCTGCAAGAAATTACAGAACAAGAATG 60.149 37.037 0.00 0.00 34.07 2.67
2476 3437 6.865205 GCTGCAAGAAATTACAGAACAAGAAT 59.135 34.615 0.00 0.00 34.07 2.40
2477 3438 6.183360 TGCTGCAAGAAATTACAGAACAAGAA 60.183 34.615 0.00 0.00 34.07 2.52
2478 3439 5.299028 TGCTGCAAGAAATTACAGAACAAGA 59.701 36.000 0.00 0.00 34.07 3.02
2479 3440 5.522456 TGCTGCAAGAAATTACAGAACAAG 58.478 37.500 0.00 0.00 34.07 3.16
2480 3441 5.512753 TGCTGCAAGAAATTACAGAACAA 57.487 34.783 0.00 0.00 34.07 2.83
2481 3442 5.512753 TTGCTGCAAGAAATTACAGAACA 57.487 34.783 11.69 0.00 34.07 3.18
2482 3443 5.922544 ACATTGCTGCAAGAAATTACAGAAC 59.077 36.000 20.72 0.00 40.00 3.01
2483 3444 6.088016 ACATTGCTGCAAGAAATTACAGAA 57.912 33.333 20.72 0.00 40.00 3.02
2484 3445 5.710513 ACATTGCTGCAAGAAATTACAGA 57.289 34.783 20.72 0.00 40.00 3.41
2485 3446 5.346822 GGAACATTGCTGCAAGAAATTACAG 59.653 40.000 20.72 4.57 40.00 2.74
2486 3447 5.010922 AGGAACATTGCTGCAAGAAATTACA 59.989 36.000 20.72 0.00 40.00 2.41
2487 3448 5.346822 CAGGAACATTGCTGCAAGAAATTAC 59.653 40.000 20.72 11.88 40.00 1.89
2488 3449 5.010922 ACAGGAACATTGCTGCAAGAAATTA 59.989 36.000 20.72 0.00 40.00 1.40
2489 3450 4.202284 ACAGGAACATTGCTGCAAGAAATT 60.202 37.500 20.72 11.30 40.00 1.82
2490 3451 3.322828 ACAGGAACATTGCTGCAAGAAAT 59.677 39.130 20.72 6.82 45.34 2.17
2491 3452 3.374220 CAGGAACATTGCTGCAAGAAA 57.626 42.857 20.72 0.00 39.74 2.52
2499 3460 3.181476 GGTTTCACAACAGGAACATTGCT 60.181 43.478 0.00 0.00 34.15 3.91
2500 3461 3.123050 GGTTTCACAACAGGAACATTGC 58.877 45.455 0.00 0.00 34.15 3.56
2501 3462 4.339247 AGAGGTTTCACAACAGGAACATTG 59.661 41.667 0.00 0.00 34.15 2.82
2502 3463 4.536765 AGAGGTTTCACAACAGGAACATT 58.463 39.130 0.00 0.00 34.15 2.71
2503 3464 4.170468 AGAGGTTTCACAACAGGAACAT 57.830 40.909 0.00 0.00 34.15 2.71
2504 3465 3.644966 AGAGGTTTCACAACAGGAACA 57.355 42.857 0.00 0.00 34.15 3.18
2505 3466 4.200092 AGAAGAGGTTTCACAACAGGAAC 58.800 43.478 0.00 0.00 34.15 3.62
2506 3467 4.451900 GAGAAGAGGTTTCACAACAGGAA 58.548 43.478 0.00 0.00 34.15 3.36
2507 3468 3.492656 CGAGAAGAGGTTTCACAACAGGA 60.493 47.826 0.00 0.00 34.15 3.86
2508 3469 2.802816 CGAGAAGAGGTTTCACAACAGG 59.197 50.000 0.00 0.00 34.15 4.00
2509 3470 3.246226 CACGAGAAGAGGTTTCACAACAG 59.754 47.826 0.00 0.00 34.15 3.16
2510 3471 3.194861 CACGAGAAGAGGTTTCACAACA 58.805 45.455 0.00 0.00 34.15 3.33
2511 3472 3.195661 ACACGAGAAGAGGTTTCACAAC 58.804 45.455 0.00 0.00 0.00 3.32
2512 3473 3.536956 ACACGAGAAGAGGTTTCACAA 57.463 42.857 0.00 0.00 0.00 3.33
2513 3474 4.098960 AGTTACACGAGAAGAGGTTTCACA 59.901 41.667 0.00 0.00 0.00 3.58
2514 3475 4.618965 AGTTACACGAGAAGAGGTTTCAC 58.381 43.478 0.00 0.00 0.00 3.18
2515 3476 4.931661 AGTTACACGAGAAGAGGTTTCA 57.068 40.909 0.00 0.00 0.00 2.69
2516 3477 5.984323 AGAAAGTTACACGAGAAGAGGTTTC 59.016 40.000 0.00 0.00 0.00 2.78
2517 3478 5.753921 CAGAAAGTTACACGAGAAGAGGTTT 59.246 40.000 0.00 0.00 0.00 3.27
2518 3479 5.290386 CAGAAAGTTACACGAGAAGAGGTT 58.710 41.667 0.00 0.00 0.00 3.50
2519 3480 4.796618 GCAGAAAGTTACACGAGAAGAGGT 60.797 45.833 0.00 0.00 0.00 3.85
2520 3481 3.675698 GCAGAAAGTTACACGAGAAGAGG 59.324 47.826 0.00 0.00 0.00 3.69
2521 3482 4.299155 TGCAGAAAGTTACACGAGAAGAG 58.701 43.478 0.00 0.00 0.00 2.85
2522 3483 4.316205 TGCAGAAAGTTACACGAGAAGA 57.684 40.909 0.00 0.00 0.00 2.87
2523 3484 4.270084 TGTTGCAGAAAGTTACACGAGAAG 59.730 41.667 0.00 0.00 0.00 2.85
2524 3485 4.185394 TGTTGCAGAAAGTTACACGAGAA 58.815 39.130 0.00 0.00 0.00 2.87
2525 3486 3.787785 TGTTGCAGAAAGTTACACGAGA 58.212 40.909 0.00 0.00 0.00 4.04
2526 3487 4.270084 TCTTGTTGCAGAAAGTTACACGAG 59.730 41.667 9.51 1.35 0.00 4.18
2527 3488 4.185394 TCTTGTTGCAGAAAGTTACACGA 58.815 39.130 9.51 0.07 0.00 4.35
2528 3489 4.518217 CTCTTGTTGCAGAAAGTTACACG 58.482 43.478 9.51 0.00 0.00 4.49
2529 3490 4.282873 GCTCTTGTTGCAGAAAGTTACAC 58.717 43.478 9.51 0.00 0.00 2.90
2530 3491 3.315191 GGCTCTTGTTGCAGAAAGTTACA 59.685 43.478 9.51 0.00 0.00 2.41
2531 3492 3.315191 TGGCTCTTGTTGCAGAAAGTTAC 59.685 43.478 9.51 0.00 0.00 2.50
2532 3493 3.550820 TGGCTCTTGTTGCAGAAAGTTA 58.449 40.909 9.51 0.00 0.00 2.24
2533 3494 2.378038 TGGCTCTTGTTGCAGAAAGTT 58.622 42.857 9.51 0.00 0.00 2.66
2534 3495 2.057137 TGGCTCTTGTTGCAGAAAGT 57.943 45.000 9.51 0.00 0.00 2.66
2535 3496 2.295349 ACATGGCTCTTGTTGCAGAAAG 59.705 45.455 0.00 4.49 0.00 2.62
2536 3497 2.034939 CACATGGCTCTTGTTGCAGAAA 59.965 45.455 0.00 0.00 0.00 2.52
2537 3498 1.610038 CACATGGCTCTTGTTGCAGAA 59.390 47.619 0.00 0.00 0.00 3.02
2538 3499 1.202794 TCACATGGCTCTTGTTGCAGA 60.203 47.619 0.00 0.00 0.00 4.26
2539 3500 1.068748 GTCACATGGCTCTTGTTGCAG 60.069 52.381 0.00 0.00 0.00 4.41
2540 3501 0.953727 GTCACATGGCTCTTGTTGCA 59.046 50.000 0.00 0.00 0.00 4.08
2541 3502 0.953727 TGTCACATGGCTCTTGTTGC 59.046 50.000 0.00 0.00 0.00 4.17
2542 3503 3.713858 TTTGTCACATGGCTCTTGTTG 57.286 42.857 0.00 0.00 0.00 3.33
2543 3504 4.734398 TTTTTGTCACATGGCTCTTGTT 57.266 36.364 0.00 0.00 0.00 2.83
2544 3505 4.586001 AGATTTTTGTCACATGGCTCTTGT 59.414 37.500 0.00 0.00 0.00 3.16
2545 3506 5.048224 AGAGATTTTTGTCACATGGCTCTTG 60.048 40.000 0.00 0.00 0.00 3.02
2546 3507 5.075493 AGAGATTTTTGTCACATGGCTCTT 58.925 37.500 0.00 0.00 0.00 2.85
2547 3508 4.660168 AGAGATTTTTGTCACATGGCTCT 58.340 39.130 0.00 0.00 0.00 4.09
2548 3509 5.182760 AGAAGAGATTTTTGTCACATGGCTC 59.817 40.000 0.00 0.00 0.00 4.70
2549 3510 5.075493 AGAAGAGATTTTTGTCACATGGCT 58.925 37.500 0.00 0.00 0.00 4.75
2550 3511 5.382618 AGAAGAGATTTTTGTCACATGGC 57.617 39.130 0.00 0.00 0.00 4.40
2551 3512 7.211966 AGAAGAAGAGATTTTTGTCACATGG 57.788 36.000 0.00 0.00 0.00 3.66
2552 3513 7.040892 TGGAGAAGAAGAGATTTTTGTCACATG 60.041 37.037 0.00 0.00 0.00 3.21
2553 3514 7.000472 TGGAGAAGAAGAGATTTTTGTCACAT 59.000 34.615 0.00 0.00 0.00 3.21
2554 3515 6.356556 TGGAGAAGAAGAGATTTTTGTCACA 58.643 36.000 0.00 0.00 0.00 3.58
2555 3516 6.867662 TGGAGAAGAAGAGATTTTTGTCAC 57.132 37.500 0.00 0.00 0.00 3.67
2556 3517 8.469309 AATTGGAGAAGAAGAGATTTTTGTCA 57.531 30.769 0.00 0.00 0.00 3.58
2557 3518 9.755804 AAAATTGGAGAAGAAGAGATTTTTGTC 57.244 29.630 0.00 0.00 0.00 3.18
2581 3542 5.163468 TGCAATAGAGGTCTTGTTGCAAAAA 60.163 36.000 20.94 0.00 45.02 1.94
2582 3543 4.340666 TGCAATAGAGGTCTTGTTGCAAAA 59.659 37.500 20.94 0.00 45.02 2.44
2583 3544 3.888323 TGCAATAGAGGTCTTGTTGCAAA 59.112 39.130 20.94 7.43 45.02 3.68
2584 3545 3.485394 TGCAATAGAGGTCTTGTTGCAA 58.515 40.909 20.94 0.00 45.02 4.08
2585 3546 3.138884 TGCAATAGAGGTCTTGTTGCA 57.861 42.857 20.02 20.02 45.39 4.08
2586 3547 4.503741 TTTGCAATAGAGGTCTTGTTGC 57.496 40.909 16.74 16.74 42.02 4.17
2587 3548 9.294030 GAATATTTTGCAATAGAGGTCTTGTTG 57.706 33.333 0.00 0.00 0.00 3.33
2588 3549 9.247861 AGAATATTTTGCAATAGAGGTCTTGTT 57.752 29.630 0.00 0.00 0.00 2.83
2589 3550 8.814038 AGAATATTTTGCAATAGAGGTCTTGT 57.186 30.769 0.00 0.00 0.00 3.16
2590 3551 9.118300 AGAGAATATTTTGCAATAGAGGTCTTG 57.882 33.333 0.00 0.00 0.00 3.02
2591 3552 9.692325 AAGAGAATATTTTGCAATAGAGGTCTT 57.308 29.630 0.00 1.49 0.00 3.01
2592 3553 9.336171 GAAGAGAATATTTTGCAATAGAGGTCT 57.664 33.333 0.00 0.08 0.00 3.85
2593 3554 9.336171 AGAAGAGAATATTTTGCAATAGAGGTC 57.664 33.333 0.00 0.00 0.00 3.85
2594 3555 9.692325 AAGAAGAGAATATTTTGCAATAGAGGT 57.308 29.630 0.00 0.00 0.00 3.85
2612 3573 9.725019 TCTTGATGCAGTAAATTAAAGAAGAGA 57.275 29.630 0.00 0.00 0.00 3.10
2613 3574 9.766277 GTCTTGATGCAGTAAATTAAAGAAGAG 57.234 33.333 0.00 0.00 0.00 2.85
2614 3575 9.283768 TGTCTTGATGCAGTAAATTAAAGAAGA 57.716 29.630 0.00 0.00 0.00 2.87
2615 3576 9.334693 GTGTCTTGATGCAGTAAATTAAAGAAG 57.665 33.333 0.00 0.00 0.00 2.85
2616 3577 8.296713 GGTGTCTTGATGCAGTAAATTAAAGAA 58.703 33.333 0.00 0.00 0.00 2.52
2617 3578 7.665559 AGGTGTCTTGATGCAGTAAATTAAAGA 59.334 33.333 0.00 0.00 0.00 2.52
2618 3579 7.820648 AGGTGTCTTGATGCAGTAAATTAAAG 58.179 34.615 0.00 0.00 0.00 1.85
2619 3580 7.759489 AGGTGTCTTGATGCAGTAAATTAAA 57.241 32.000 0.00 0.00 0.00 1.52
2620 3581 9.461312 AATAGGTGTCTTGATGCAGTAAATTAA 57.539 29.630 0.00 0.00 0.00 1.40
2621 3582 8.892723 CAATAGGTGTCTTGATGCAGTAAATTA 58.107 33.333 0.00 0.00 0.00 1.40
2622 3583 7.629222 GCAATAGGTGTCTTGATGCAGTAAATT 60.629 37.037 0.00 0.00 32.80 1.82
2623 3584 6.183360 GCAATAGGTGTCTTGATGCAGTAAAT 60.183 38.462 0.00 0.00 32.80 1.40
2624 3585 5.123820 GCAATAGGTGTCTTGATGCAGTAAA 59.876 40.000 0.00 0.00 32.80 2.01
2625 3586 4.635765 GCAATAGGTGTCTTGATGCAGTAA 59.364 41.667 0.00 0.00 32.80 2.24
2626 3587 4.191544 GCAATAGGTGTCTTGATGCAGTA 58.808 43.478 0.00 0.00 32.80 2.74
2627 3588 3.012518 GCAATAGGTGTCTTGATGCAGT 58.987 45.455 0.00 0.00 32.80 4.40
2628 3589 2.031314 CGCAATAGGTGTCTTGATGCAG 59.969 50.000 0.00 0.00 32.80 4.41
2629 3590 2.009051 CGCAATAGGTGTCTTGATGCA 58.991 47.619 0.00 0.00 32.80 3.96
2630 3591 2.279741 TCGCAATAGGTGTCTTGATGC 58.720 47.619 0.00 0.00 0.00 3.91
2631 3592 4.393062 AGTTTCGCAATAGGTGTCTTGATG 59.607 41.667 0.00 0.00 0.00 3.07
2632 3593 4.579869 AGTTTCGCAATAGGTGTCTTGAT 58.420 39.130 0.00 0.00 0.00 2.57
2633 3594 4.002906 AGTTTCGCAATAGGTGTCTTGA 57.997 40.909 0.00 0.00 0.00 3.02
2634 3595 4.749245 AAGTTTCGCAATAGGTGTCTTG 57.251 40.909 0.00 0.00 0.00 3.02
2635 3596 5.767816 AAAAGTTTCGCAATAGGTGTCTT 57.232 34.783 0.00 0.00 0.00 3.01
2636 3597 5.531287 AGAAAAAGTTTCGCAATAGGTGTCT 59.469 36.000 0.00 0.00 0.00 3.41
2637 3598 5.758924 AGAAAAAGTTTCGCAATAGGTGTC 58.241 37.500 0.00 0.00 0.00 3.67
2638 3599 5.531287 AGAGAAAAAGTTTCGCAATAGGTGT 59.469 36.000 7.13 0.00 0.00 4.16
2639 3600 6.002062 AGAGAAAAAGTTTCGCAATAGGTG 57.998 37.500 7.13 0.00 0.00 4.00
2640 3601 5.998363 AGAGAGAAAAAGTTTCGCAATAGGT 59.002 36.000 7.13 0.00 0.00 3.08
2641 3602 6.487689 AGAGAGAAAAAGTTTCGCAATAGG 57.512 37.500 7.13 0.00 0.00 2.57
2644 3605 9.750125 AAAAATAGAGAGAAAAAGTTTCGCAAT 57.250 25.926 7.13 0.00 0.00 3.56
2645 3606 9.233232 GAAAAATAGAGAGAAAAAGTTTCGCAA 57.767 29.630 7.13 0.00 0.00 4.85
2646 3607 8.621286 AGAAAAATAGAGAGAAAAAGTTTCGCA 58.379 29.630 7.13 0.00 0.00 5.10
2647 3608 8.896826 CAGAAAAATAGAGAGAAAAAGTTTCGC 58.103 33.333 0.00 0.00 0.00 4.70
2648 3609 8.896826 GCAGAAAAATAGAGAGAAAAAGTTTCG 58.103 33.333 0.00 0.00 0.00 3.46
2649 3610 9.736023 TGCAGAAAAATAGAGAGAAAAAGTTTC 57.264 29.630 0.00 0.00 0.00 2.78
2651 3612 9.521503 GTTGCAGAAAAATAGAGAGAAAAAGTT 57.478 29.630 0.00 0.00 0.00 2.66
2652 3613 8.686334 TGTTGCAGAAAAATAGAGAGAAAAAGT 58.314 29.630 0.00 0.00 0.00 2.66
2653 3614 9.520204 TTGTTGCAGAAAAATAGAGAGAAAAAG 57.480 29.630 0.00 0.00 0.00 2.27
2654 3615 9.520204 CTTGTTGCAGAAAAATAGAGAGAAAAA 57.480 29.630 0.00 0.00 0.00 1.94
2655 3616 8.902806 TCTTGTTGCAGAAAAATAGAGAGAAAA 58.097 29.630 0.00 0.00 0.00 2.29
2656 3617 8.345565 GTCTTGTTGCAGAAAAATAGAGAGAAA 58.654 33.333 0.00 0.00 0.00 2.52
2657 3618 7.041098 GGTCTTGTTGCAGAAAAATAGAGAGAA 60.041 37.037 0.00 0.00 0.00 2.87
2658 3619 6.428159 GGTCTTGTTGCAGAAAAATAGAGAGA 59.572 38.462 0.00 0.00 0.00 3.10
2659 3620 6.348868 GGGTCTTGTTGCAGAAAAATAGAGAG 60.349 42.308 0.00 0.00 0.00 3.20
2660 3621 5.473504 GGGTCTTGTTGCAGAAAAATAGAGA 59.526 40.000 0.00 0.00 0.00 3.10
2661 3622 5.474876 AGGGTCTTGTTGCAGAAAAATAGAG 59.525 40.000 0.00 0.00 0.00 2.43
2662 3623 5.385198 AGGGTCTTGTTGCAGAAAAATAGA 58.615 37.500 0.00 0.00 0.00 1.98
2663 3624 5.712152 AGGGTCTTGTTGCAGAAAAATAG 57.288 39.130 0.00 0.00 0.00 1.73
2664 3625 5.596361 TCAAGGGTCTTGTTGCAGAAAAATA 59.404 36.000 7.42 0.00 0.00 1.40
2665 3626 4.405358 TCAAGGGTCTTGTTGCAGAAAAAT 59.595 37.500 7.42 0.00 0.00 1.82
2666 3627 3.766591 TCAAGGGTCTTGTTGCAGAAAAA 59.233 39.130 7.42 0.00 0.00 1.94
2667 3628 3.360867 TCAAGGGTCTTGTTGCAGAAAA 58.639 40.909 7.42 0.00 0.00 2.29
2668 3629 3.011566 TCAAGGGTCTTGTTGCAGAAA 57.988 42.857 7.42 0.00 0.00 2.52
2669 3630 2.727123 TCAAGGGTCTTGTTGCAGAA 57.273 45.000 7.42 0.00 0.00 3.02
2670 3631 2.158623 ACATCAAGGGTCTTGTTGCAGA 60.159 45.455 14.83 0.00 0.00 4.26
2671 3632 2.233271 ACATCAAGGGTCTTGTTGCAG 58.767 47.619 14.83 3.74 0.00 4.41
2672 3633 2.363306 ACATCAAGGGTCTTGTTGCA 57.637 45.000 14.83 0.00 0.00 4.08
2673 3634 4.846779 TTTACATCAAGGGTCTTGTTGC 57.153 40.909 14.83 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.