Multiple sequence alignment - TraesCS2B01G400700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G400700 chr2B 100.000 2805 0 0 1 2805 569061889 569064693 0.000000e+00 5180
1 TraesCS2B01G400700 chr2B 83.125 160 25 2 1857 2015 454029453 454029295 8.100000e-31 145
2 TraesCS2B01G400700 chr2D 95.455 946 32 4 915 1856 484357813 484358751 0.000000e+00 1498
3 TraesCS2B01G400700 chr2D 90.438 753 49 11 1 741 484334604 484335345 0.000000e+00 970
4 TraesCS2B01G400700 chr2D 81.818 165 29 1 1857 2020 617331519 617331683 1.360000e-28 137
5 TraesCS2B01G400700 chr2A 95.374 843 25 3 925 1767 628638097 628638925 0.000000e+00 1328
6 TraesCS2B01G400700 chr2A 84.558 667 96 6 2036 2699 727600780 727601442 0.000000e+00 654
7 TraesCS2B01G400700 chr2A 90.426 188 11 4 759 941 628637612 628637797 1.000000e-59 241
8 TraesCS2B01G400700 chr2A 94.565 92 4 1 1765 1856 628639028 628639118 1.050000e-29 141
9 TraesCS2B01G400700 chr3A 95.652 690 24 2 2021 2704 49315846 49315157 0.000000e+00 1103
10 TraesCS2B01G400700 chr1A 92.576 687 46 1 2021 2702 439903914 439903228 0.000000e+00 981
11 TraesCS2B01G400700 chr1A 93.846 195 7 1 2515 2704 15507394 15507588 3.540000e-74 289
12 TraesCS2B01G400700 chr1A 82.822 163 27 1 1857 2018 319434803 319434641 8.100000e-31 145
13 TraesCS2B01G400700 chrUn 90.684 687 51 4 2021 2702 290758600 290757922 0.000000e+00 902
14 TraesCS2B01G400700 chrUn 90.684 687 51 4 2021 2702 319225988 319226666 0.000000e+00 902
15 TraesCS2B01G400700 chr5A 88.857 691 44 3 2021 2706 362791658 362790996 0.000000e+00 819
16 TraesCS2B01G400700 chr5A 81.548 168 26 5 1856 2020 666586333 666586498 1.750000e-27 134
17 TraesCS2B01G400700 chr5B 85.528 691 75 5 2021 2703 536522816 536523489 0.000000e+00 699
18 TraesCS2B01G400700 chr4D 94.686 414 20 1 2022 2435 459682239 459682650 2.360000e-180 641
19 TraesCS2B01G400700 chr4D 93.548 279 13 1 2431 2704 459685270 459685548 7.230000e-111 411
20 TraesCS2B01G400700 chr6B 86.139 404 46 4 2021 2414 664711268 664711671 7.180000e-116 427
21 TraesCS2B01G400700 chr6B 80.925 173 30 2 1847 2019 163450784 163450615 1.750000e-27 134
22 TraesCS2B01G400700 chr3B 84.211 171 27 0 1850 2020 765988441 765988611 1.730000e-37 167
23 TraesCS2B01G400700 chr3B 82.424 165 28 1 1857 2020 416808791 416808627 2.910000e-30 143
24 TraesCS2B01G400700 chr7A 83.030 165 27 1 1857 2020 578982415 578982251 6.260000e-32 148
25 TraesCS2B01G400700 chr3D 82.530 166 26 3 1856 2020 491237399 491237236 2.910000e-30 143


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G400700 chr2B 569061889 569064693 2804 False 5180 5180 100.000 1 2805 1 chr2B.!!$F1 2804
1 TraesCS2B01G400700 chr2D 484357813 484358751 938 False 1498 1498 95.455 915 1856 1 chr2D.!!$F2 941
2 TraesCS2B01G400700 chr2D 484334604 484335345 741 False 970 970 90.438 1 741 1 chr2D.!!$F1 740
3 TraesCS2B01G400700 chr2A 727600780 727601442 662 False 654 654 84.558 2036 2699 1 chr2A.!!$F1 663
4 TraesCS2B01G400700 chr2A 628637612 628639118 1506 False 570 1328 93.455 759 1856 3 chr2A.!!$F2 1097
5 TraesCS2B01G400700 chr3A 49315157 49315846 689 True 1103 1103 95.652 2021 2704 1 chr3A.!!$R1 683
6 TraesCS2B01G400700 chr1A 439903228 439903914 686 True 981 981 92.576 2021 2702 1 chr1A.!!$R2 681
7 TraesCS2B01G400700 chrUn 290757922 290758600 678 True 902 902 90.684 2021 2702 1 chrUn.!!$R1 681
8 TraesCS2B01G400700 chrUn 319225988 319226666 678 False 902 902 90.684 2021 2702 1 chrUn.!!$F1 681
9 TraesCS2B01G400700 chr5A 362790996 362791658 662 True 819 819 88.857 2021 2706 1 chr5A.!!$R1 685
10 TraesCS2B01G400700 chr5B 536522816 536523489 673 False 699 699 85.528 2021 2703 1 chr5B.!!$F1 682
11 TraesCS2B01G400700 chr4D 459682239 459685548 3309 False 526 641 94.117 2022 2704 2 chr4D.!!$F1 682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
899 908 0.040692 GCACCGGAGAAAACGAAACC 60.041 55.0 9.46 0.0 0.0 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1940 2403 0.033366 GCACGGCCAATCCAAGTTTT 59.967 50.0 2.24 0.0 34.01 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.878667 TTGATGATAATGATTGTTGAATTTGCT 57.121 25.926 0.00 0.00 0.00 3.91
155 158 6.556116 AGGCCCATCTTATAAATGAAAATGCT 59.444 34.615 0.00 0.00 0.00 3.79
166 169 3.082698 TGAAAATGCTCTGCACACAAC 57.917 42.857 0.00 0.00 43.04 3.32
178 181 1.531058 GCACACAACGCTTTTTCGTCT 60.531 47.619 0.00 0.00 42.46 4.18
216 219 6.384224 CAGACAGTAAATCATGTTGCATGTT 58.616 36.000 8.68 0.00 0.00 2.71
244 247 3.282021 CACAAACTGAATCATCCCGGAT 58.718 45.455 0.73 0.00 0.00 4.18
256 259 3.255888 TCATCCCGGATTGTCTCTAATCG 59.744 47.826 0.73 0.00 37.82 3.34
267 270 7.201444 GGATTGTCTCTAATCGTACAAGTGTTG 60.201 40.741 0.00 0.00 37.82 3.33
277 280 3.426159 CGTACAAGTGTTGCATGGGAATC 60.426 47.826 0.00 0.00 0.00 2.52
280 283 3.245229 ACAAGTGTTGCATGGGAATCCTA 60.245 43.478 0.00 0.00 0.00 2.94
285 288 3.135712 TGTTGCATGGGAATCCTACGTAT 59.864 43.478 0.00 0.00 0.00 3.06
347 350 7.034397 GGAGGACACAGTTAAGTATAGACAAC 58.966 42.308 0.00 0.00 0.00 3.32
348 351 7.309621 GGAGGACACAGTTAAGTATAGACAACA 60.310 40.741 0.00 0.00 0.00 3.33
349 352 8.135382 AGGACACAGTTAAGTATAGACAACAT 57.865 34.615 0.00 0.00 0.00 2.71
350 353 9.251440 AGGACACAGTTAAGTATAGACAACATA 57.749 33.333 0.00 0.00 0.00 2.29
399 404 4.441913 CCCTAATGCATTGGTTGATTCCAC 60.442 45.833 22.27 0.00 37.20 4.02
400 405 4.160065 CCTAATGCATTGGTTGATTCCACA 59.840 41.667 22.27 0.00 37.20 4.17
401 406 4.829872 AATGCATTGGTTGATTCCACAT 57.170 36.364 12.09 0.00 37.20 3.21
402 407 3.872511 TGCATTGGTTGATTCCACATC 57.127 42.857 0.00 0.00 37.20 3.06
403 408 2.164017 TGCATTGGTTGATTCCACATCG 59.836 45.455 0.00 0.00 37.20 3.84
404 409 2.423185 GCATTGGTTGATTCCACATCGA 59.577 45.455 0.00 0.00 37.20 3.59
405 410 3.488047 GCATTGGTTGATTCCACATCGAG 60.488 47.826 0.00 0.00 37.20 4.04
406 411 3.694043 TTGGTTGATTCCACATCGAGA 57.306 42.857 0.00 0.00 37.20 4.04
407 412 3.694043 TGGTTGATTCCACATCGAGAA 57.306 42.857 0.00 0.00 31.96 2.87
408 413 4.220693 TGGTTGATTCCACATCGAGAAT 57.779 40.909 0.00 0.00 35.43 2.40
409 414 4.191544 TGGTTGATTCCACATCGAGAATC 58.808 43.478 14.87 14.87 45.63 2.52
416 421 7.675270 GATTCCACATCGAGAATCAAATTTG 57.325 36.000 12.15 12.15 45.05 2.32
417 422 6.816134 TTCCACATCGAGAATCAAATTTGA 57.184 33.333 22.52 22.52 42.14 2.69
418 423 6.182039 TCCACATCGAGAATCAAATTTGAC 57.818 37.500 22.71 11.43 40.49 3.18
419 424 5.704978 TCCACATCGAGAATCAAATTTGACA 59.295 36.000 22.71 2.32 40.49 3.58
420 425 6.025896 CCACATCGAGAATCAAATTTGACAG 58.974 40.000 22.71 12.12 40.49 3.51
421 426 6.128200 CCACATCGAGAATCAAATTTGACAGA 60.128 38.462 22.71 16.34 40.49 3.41
422 427 7.300320 CACATCGAGAATCAAATTTGACAGAA 58.700 34.615 22.71 7.51 40.49 3.02
423 428 7.966753 CACATCGAGAATCAAATTTGACAGAAT 59.033 33.333 22.71 4.20 40.49 2.40
424 429 8.517878 ACATCGAGAATCAAATTTGACAGAATT 58.482 29.630 22.71 12.76 40.49 2.17
425 430 9.350357 CATCGAGAATCAAATTTGACAGAATTT 57.650 29.630 22.71 12.05 40.49 1.82
439 444 7.364522 TGACAGAATTTAATGTAGACACTGC 57.635 36.000 0.00 0.00 0.00 4.40
440 445 7.161404 TGACAGAATTTAATGTAGACACTGCT 58.839 34.615 0.00 0.00 0.00 4.24
441 446 8.311109 TGACAGAATTTAATGTAGACACTGCTA 58.689 33.333 0.00 0.00 0.00 3.49
442 447 9.319143 GACAGAATTTAATGTAGACACTGCTAT 57.681 33.333 0.00 0.00 0.00 2.97
464 469 9.535878 GCTATAGTGCTATATTTGACTATTCCC 57.464 37.037 0.84 0.00 34.30 3.97
469 474 9.780186 AGTGCTATATTTGACTATTCCCTAAAC 57.220 33.333 0.00 0.00 0.00 2.01
470 475 9.555727 GTGCTATATTTGACTATTCCCTAAACA 57.444 33.333 0.00 0.00 0.00 2.83
476 481 7.391148 TTTGACTATTCCCTAAACAATGAGC 57.609 36.000 0.00 0.00 0.00 4.26
477 482 5.437060 TGACTATTCCCTAAACAATGAGCC 58.563 41.667 0.00 0.00 0.00 4.70
478 483 4.793201 ACTATTCCCTAAACAATGAGCCC 58.207 43.478 0.00 0.00 0.00 5.19
479 484 4.478686 ACTATTCCCTAAACAATGAGCCCT 59.521 41.667 0.00 0.00 0.00 5.19
480 485 5.670361 ACTATTCCCTAAACAATGAGCCCTA 59.330 40.000 0.00 0.00 0.00 3.53
481 486 4.938575 TTCCCTAAACAATGAGCCCTAA 57.061 40.909 0.00 0.00 0.00 2.69
482 487 4.938575 TCCCTAAACAATGAGCCCTAAA 57.061 40.909 0.00 0.00 0.00 1.85
483 488 5.466127 TCCCTAAACAATGAGCCCTAAAT 57.534 39.130 0.00 0.00 0.00 1.40
484 489 6.584471 TCCCTAAACAATGAGCCCTAAATA 57.416 37.500 0.00 0.00 0.00 1.40
485 490 6.362248 TCCCTAAACAATGAGCCCTAAATAC 58.638 40.000 0.00 0.00 0.00 1.89
486 491 6.069323 TCCCTAAACAATGAGCCCTAAATACA 60.069 38.462 0.00 0.00 0.00 2.29
487 492 6.605594 CCCTAAACAATGAGCCCTAAATACAA 59.394 38.462 0.00 0.00 0.00 2.41
488 493 7.123547 CCCTAAACAATGAGCCCTAAATACAAA 59.876 37.037 0.00 0.00 0.00 2.83
489 494 8.527810 CCTAAACAATGAGCCCTAAATACAAAA 58.472 33.333 0.00 0.00 0.00 2.44
490 495 9.353999 CTAAACAATGAGCCCTAAATACAAAAC 57.646 33.333 0.00 0.00 0.00 2.43
491 496 7.539034 AACAATGAGCCCTAAATACAAAACT 57.461 32.000 0.00 0.00 0.00 2.66
492 497 7.539034 ACAATGAGCCCTAAATACAAAACTT 57.461 32.000 0.00 0.00 0.00 2.66
493 498 7.962441 ACAATGAGCCCTAAATACAAAACTTT 58.038 30.769 0.00 0.00 0.00 2.66
494 499 9.084533 ACAATGAGCCCTAAATACAAAACTTTA 57.915 29.630 0.00 0.00 0.00 1.85
495 500 9.573133 CAATGAGCCCTAAATACAAAACTTTAG 57.427 33.333 0.00 0.00 35.60 1.85
496 501 7.153217 TGAGCCCTAAATACAAAACTTTAGC 57.847 36.000 0.00 0.00 34.87 3.09
497 502 6.946009 TGAGCCCTAAATACAAAACTTTAGCT 59.054 34.615 0.00 0.00 34.87 3.32
498 503 7.450323 TGAGCCCTAAATACAAAACTTTAGCTT 59.550 33.333 0.00 0.00 34.87 3.74
499 504 8.190326 AGCCCTAAATACAAAACTTTAGCTTT 57.810 30.769 0.00 0.00 34.87 3.51
500 505 9.304335 AGCCCTAAATACAAAACTTTAGCTTTA 57.696 29.630 0.00 0.00 34.87 1.85
501 506 9.917129 GCCCTAAATACAAAACTTTAGCTTTAA 57.083 29.630 0.00 0.00 34.87 1.52
521 526 9.665264 GCTTTAATAGATTTTGACTAATTCGGG 57.335 33.333 0.00 0.00 0.00 5.14
539 544 3.957591 GGGACGGAGGGAATATAAGAC 57.042 52.381 0.00 0.00 0.00 3.01
540 545 3.508426 GGGACGGAGGGAATATAAGACT 58.492 50.000 0.00 0.00 0.00 3.24
541 546 3.902467 GGGACGGAGGGAATATAAGACTT 59.098 47.826 0.00 0.00 0.00 3.01
542 547 4.347292 GGGACGGAGGGAATATAAGACTTT 59.653 45.833 0.00 0.00 0.00 2.66
543 548 5.298347 GGACGGAGGGAATATAAGACTTTG 58.702 45.833 0.00 0.00 0.00 2.77
544 549 4.704965 ACGGAGGGAATATAAGACTTTGC 58.295 43.478 0.00 0.00 0.00 3.68
545 550 4.409247 ACGGAGGGAATATAAGACTTTGCT 59.591 41.667 0.00 0.00 0.00 3.91
546 551 5.601313 ACGGAGGGAATATAAGACTTTGCTA 59.399 40.000 0.00 0.00 0.00 3.49
547 552 6.099269 ACGGAGGGAATATAAGACTTTGCTAA 59.901 38.462 0.00 0.00 0.00 3.09
548 553 6.424207 CGGAGGGAATATAAGACTTTGCTAAC 59.576 42.308 0.00 0.00 0.00 2.34
549 554 6.711194 GGAGGGAATATAAGACTTTGCTAACC 59.289 42.308 0.00 0.00 0.00 2.85
550 555 7.420330 GGAGGGAATATAAGACTTTGCTAACCT 60.420 40.741 0.00 0.00 0.00 3.50
551 556 7.873195 AGGGAATATAAGACTTTGCTAACCTT 58.127 34.615 0.00 0.00 0.00 3.50
552 557 8.336987 AGGGAATATAAGACTTTGCTAACCTTT 58.663 33.333 0.00 0.00 0.00 3.11
553 558 8.967918 GGGAATATAAGACTTTGCTAACCTTTT 58.032 33.333 0.00 0.00 0.00 2.27
574 579 4.506886 TTTTTGCACGTGGTTTATAGGG 57.493 40.909 18.88 0.00 0.00 3.53
575 580 2.863132 TTGCACGTGGTTTATAGGGT 57.137 45.000 18.88 0.00 0.00 4.34
576 581 3.977134 TTGCACGTGGTTTATAGGGTA 57.023 42.857 18.88 0.00 0.00 3.69
577 582 4.490899 TTGCACGTGGTTTATAGGGTAT 57.509 40.909 18.88 0.00 0.00 2.73
578 583 3.799366 TGCACGTGGTTTATAGGGTATG 58.201 45.455 18.88 0.00 0.00 2.39
579 584 3.135994 GCACGTGGTTTATAGGGTATGG 58.864 50.000 18.88 0.00 0.00 2.74
580 585 3.135994 CACGTGGTTTATAGGGTATGGC 58.864 50.000 7.95 0.00 0.00 4.40
581 586 3.043418 ACGTGGTTTATAGGGTATGGCT 58.957 45.455 0.00 0.00 0.00 4.75
582 587 4.039488 CACGTGGTTTATAGGGTATGGCTA 59.961 45.833 7.95 0.00 0.00 3.93
583 588 4.655186 ACGTGGTTTATAGGGTATGGCTAA 59.345 41.667 0.00 0.00 0.00 3.09
584 589 4.992951 CGTGGTTTATAGGGTATGGCTAAC 59.007 45.833 0.00 0.00 0.00 2.34
585 590 5.221581 CGTGGTTTATAGGGTATGGCTAACT 60.222 44.000 0.00 0.00 0.00 2.24
586 591 6.598503 GTGGTTTATAGGGTATGGCTAACTT 58.401 40.000 0.00 0.00 0.00 2.66
587 592 7.058525 GTGGTTTATAGGGTATGGCTAACTTT 58.941 38.462 0.00 0.00 0.00 2.66
588 593 7.228108 GTGGTTTATAGGGTATGGCTAACTTTC 59.772 40.741 0.00 0.00 0.00 2.62
589 594 7.092354 TGGTTTATAGGGTATGGCTAACTTTCA 60.092 37.037 0.00 0.00 0.00 2.69
590 595 7.942894 GGTTTATAGGGTATGGCTAACTTTCAT 59.057 37.037 0.00 0.00 0.00 2.57
591 596 9.000486 GTTTATAGGGTATGGCTAACTTTCATC 58.000 37.037 0.00 0.00 0.00 2.92
592 597 8.506196 TTATAGGGTATGGCTAACTTTCATCT 57.494 34.615 0.00 0.00 0.00 2.90
593 598 9.610104 TTATAGGGTATGGCTAACTTTCATCTA 57.390 33.333 0.00 0.00 0.00 1.98
594 599 6.426646 AGGGTATGGCTAACTTTCATCTAG 57.573 41.667 0.00 0.00 0.00 2.43
595 600 6.143915 AGGGTATGGCTAACTTTCATCTAGA 58.856 40.000 0.00 0.00 0.00 2.43
596 601 6.789959 AGGGTATGGCTAACTTTCATCTAGAT 59.210 38.462 0.00 0.00 0.00 1.98
597 602 6.876257 GGGTATGGCTAACTTTCATCTAGATG 59.124 42.308 24.32 24.32 40.09 2.90
598 603 7.256332 GGGTATGGCTAACTTTCATCTAGATGA 60.256 40.741 27.93 27.93 45.30 2.92
599 604 8.317679 GGTATGGCTAACTTTCATCTAGATGAT 58.682 37.037 31.02 20.43 46.12 2.45
630 635 7.381766 TCAAGTCTCATGTAAATGACAATGG 57.618 36.000 0.00 0.00 42.78 3.16
631 636 6.942005 TCAAGTCTCATGTAAATGACAATGGT 59.058 34.615 0.00 0.00 42.78 3.55
632 637 8.100164 TCAAGTCTCATGTAAATGACAATGGTA 58.900 33.333 0.00 0.00 42.78 3.25
633 638 8.896744 CAAGTCTCATGTAAATGACAATGGTAT 58.103 33.333 0.00 0.00 42.78 2.73
634 639 8.442632 AGTCTCATGTAAATGACAATGGTATG 57.557 34.615 0.00 0.00 42.78 2.39
635 640 8.267183 AGTCTCATGTAAATGACAATGGTATGA 58.733 33.333 0.00 0.00 42.78 2.15
636 641 8.892723 GTCTCATGTAAATGACAATGGTATGAA 58.107 33.333 0.00 0.00 42.78 2.57
637 642 9.460019 TCTCATGTAAATGACAATGGTATGAAA 57.540 29.630 0.00 0.00 42.78 2.69
661 666 5.453567 AAGAAAAAGAAAAGATCCCCACG 57.546 39.130 0.00 0.00 0.00 4.94
662 667 4.470602 AGAAAAAGAAAAGATCCCCACGT 58.529 39.130 0.00 0.00 0.00 4.49
663 668 5.627135 AGAAAAAGAAAAGATCCCCACGTA 58.373 37.500 0.00 0.00 0.00 3.57
664 669 6.066032 AGAAAAAGAAAAGATCCCCACGTAA 58.934 36.000 0.00 0.00 0.00 3.18
665 670 6.719829 AGAAAAAGAAAAGATCCCCACGTAAT 59.280 34.615 0.00 0.00 0.00 1.89
666 671 6.510879 AAAAGAAAAGATCCCCACGTAATC 57.489 37.500 0.00 0.00 0.00 1.75
667 672 5.437191 AAGAAAAGATCCCCACGTAATCT 57.563 39.130 0.00 0.00 0.00 2.40
668 673 5.024785 AGAAAAGATCCCCACGTAATCTC 57.975 43.478 0.00 0.00 0.00 2.75
669 674 3.840124 AAAGATCCCCACGTAATCTCC 57.160 47.619 0.00 0.00 0.00 3.71
670 675 1.329256 AGATCCCCACGTAATCTCCG 58.671 55.000 0.00 0.00 0.00 4.63
671 676 1.038280 GATCCCCACGTAATCTCCGT 58.962 55.000 0.00 0.00 39.52 4.69
680 685 4.771590 ACGTAATCTCCGTGTAAACTCA 57.228 40.909 0.00 0.00 37.12 3.41
681 686 5.320549 ACGTAATCTCCGTGTAAACTCAT 57.679 39.130 0.00 0.00 37.12 2.90
682 687 6.441093 ACGTAATCTCCGTGTAAACTCATA 57.559 37.500 0.00 0.00 37.12 2.15
683 688 7.035840 ACGTAATCTCCGTGTAAACTCATAT 57.964 36.000 0.00 0.00 37.12 1.78
684 689 6.916387 ACGTAATCTCCGTGTAAACTCATATG 59.084 38.462 0.00 0.00 37.12 1.78
685 690 7.136772 CGTAATCTCCGTGTAAACTCATATGA 58.863 38.462 5.07 5.07 0.00 2.15
686 691 7.113124 CGTAATCTCCGTGTAAACTCATATGAC 59.887 40.741 0.00 0.00 0.00 3.06
687 692 5.907866 TCTCCGTGTAAACTCATATGACA 57.092 39.130 0.00 0.00 0.00 3.58
688 693 6.465439 TCTCCGTGTAAACTCATATGACAT 57.535 37.500 0.00 0.00 0.00 3.06
689 694 7.576861 TCTCCGTGTAAACTCATATGACATA 57.423 36.000 0.00 0.00 0.00 2.29
690 695 8.178313 TCTCCGTGTAAACTCATATGACATAT 57.822 34.615 0.00 1.87 0.00 1.78
691 696 8.082242 TCTCCGTGTAAACTCATATGACATATG 58.918 37.037 23.99 23.99 43.09 1.78
692 697 7.947282 TCCGTGTAAACTCATATGACATATGA 58.053 34.615 28.27 28.27 46.85 2.15
737 742 9.950496 AACATATGAGTTAGATGAGACTTTGTT 57.050 29.630 10.38 0.00 32.37 2.83
822 827 0.317160 CGTGAGCACCACAGGACTTA 59.683 55.000 9.43 0.00 45.98 2.24
862 867 0.318441 TCGACTCCAGAGCCTTTGTG 59.682 55.000 0.00 0.00 0.00 3.33
875 880 3.327757 AGCCTTTGTGAGTAGATGGACAA 59.672 43.478 0.00 0.00 0.00 3.18
876 881 4.072131 GCCTTTGTGAGTAGATGGACAAA 58.928 43.478 0.00 0.00 36.27 2.83
899 908 0.040692 GCACCGGAGAAAACGAAACC 60.041 55.000 9.46 0.00 0.00 3.27
1025 1350 1.339610 CTGCCAAAATTTGTCCCGTCA 59.660 47.619 4.92 0.00 0.00 4.35
1026 1351 1.757118 TGCCAAAATTTGTCCCGTCAA 59.243 42.857 4.92 0.00 0.00 3.18
1027 1352 2.366916 TGCCAAAATTTGTCCCGTCAAT 59.633 40.909 4.92 0.00 0.00 2.57
1028 1353 3.574396 TGCCAAAATTTGTCCCGTCAATA 59.426 39.130 4.92 0.00 0.00 1.90
1029 1354 4.039245 TGCCAAAATTTGTCCCGTCAATAA 59.961 37.500 4.92 0.00 0.00 1.40
1030 1355 4.991687 GCCAAAATTTGTCCCGTCAATAAA 59.008 37.500 4.92 0.00 0.00 1.40
1031 1356 5.120053 GCCAAAATTTGTCCCGTCAATAAAG 59.880 40.000 4.92 0.00 0.00 1.85
1032 1357 5.120053 CCAAAATTTGTCCCGTCAATAAAGC 59.880 40.000 4.92 0.00 0.00 3.51
1033 1358 4.450082 AATTTGTCCCGTCAATAAAGCC 57.550 40.909 0.00 0.00 0.00 4.35
1034 1359 2.871096 TTGTCCCGTCAATAAAGCCT 57.129 45.000 0.00 0.00 0.00 4.58
1035 1360 3.985019 TTGTCCCGTCAATAAAGCCTA 57.015 42.857 0.00 0.00 0.00 3.93
1119 1444 1.003262 CCGTTTCGGCGAAGTTCGTA 61.003 55.000 25.04 12.44 42.81 3.43
1173 1498 2.734276 TGCTGACATGCGTGTTACTA 57.266 45.000 13.92 0.00 39.09 1.82
1187 1512 0.818938 TTACTAGCCGCGTTCATGGA 59.181 50.000 4.92 0.00 0.00 3.41
1230 1558 6.450545 CAAAAGCGACAGATATCAGATCCTA 58.549 40.000 5.32 0.00 0.00 2.94
1258 1586 1.746220 CCACTTTCTCGGTCGATCTCT 59.254 52.381 0.00 0.00 0.00 3.10
1749 2077 5.484173 TCCGTTGTTTTCATATGATGAGC 57.516 39.130 6.17 1.71 40.94 4.26
1887 2350 9.487790 AATTACATTGATGGTGTTAAAACTTGG 57.512 29.630 0.00 0.00 0.00 3.61
1888 2351 5.296748 ACATTGATGGTGTTAAAACTTGGC 58.703 37.500 0.00 0.00 0.00 4.52
1889 2352 3.634568 TGATGGTGTTAAAACTTGGCG 57.365 42.857 0.00 0.00 0.00 5.69
1890 2353 2.287909 TGATGGTGTTAAAACTTGGCGC 60.288 45.455 0.00 0.00 0.00 6.53
1891 2354 1.103803 TGGTGTTAAAACTTGGCGCA 58.896 45.000 10.83 0.00 0.00 6.09
1892 2355 1.476891 TGGTGTTAAAACTTGGCGCAA 59.523 42.857 10.83 0.00 0.00 4.85
1893 2356 2.094182 TGGTGTTAAAACTTGGCGCAAA 60.094 40.909 10.83 2.19 0.00 3.68
1894 2357 3.127589 GGTGTTAAAACTTGGCGCAAAT 58.872 40.909 10.83 0.00 0.00 2.32
1895 2358 3.059935 GGTGTTAAAACTTGGCGCAAATG 60.060 43.478 10.83 0.61 0.00 2.32
1896 2359 3.799420 GTGTTAAAACTTGGCGCAAATGA 59.201 39.130 10.83 0.00 0.00 2.57
1897 2360 4.447389 GTGTTAAAACTTGGCGCAAATGAT 59.553 37.500 10.83 0.00 0.00 2.45
1898 2361 4.683781 TGTTAAAACTTGGCGCAAATGATC 59.316 37.500 10.83 0.00 0.00 2.92
1899 2362 3.383620 AAAACTTGGCGCAAATGATCA 57.616 38.095 10.83 0.00 0.00 2.92
1900 2363 3.598019 AAACTTGGCGCAAATGATCAT 57.402 38.095 10.83 1.18 0.00 2.45
1901 2364 3.598019 AACTTGGCGCAAATGATCATT 57.402 38.095 15.36 15.36 0.00 2.57
1902 2365 3.598019 ACTTGGCGCAAATGATCATTT 57.402 38.095 24.83 24.83 41.33 2.32
1903 2366 3.929094 ACTTGGCGCAAATGATCATTTT 58.071 36.364 27.30 12.74 38.84 1.82
1904 2367 5.070770 ACTTGGCGCAAATGATCATTTTA 57.929 34.783 27.30 11.40 38.84 1.52
1905 2368 5.104374 ACTTGGCGCAAATGATCATTTTAG 58.896 37.500 27.30 23.25 38.84 1.85
1906 2369 4.717233 TGGCGCAAATGATCATTTTAGT 57.283 36.364 27.30 7.67 38.84 2.24
1907 2370 4.422840 TGGCGCAAATGATCATTTTAGTG 58.577 39.130 27.30 23.10 38.84 2.74
1908 2371 4.082300 TGGCGCAAATGATCATTTTAGTGT 60.082 37.500 27.30 6.59 38.84 3.55
1909 2372 4.500477 GGCGCAAATGATCATTTTAGTGTC 59.500 41.667 27.30 21.14 38.84 3.67
1910 2373 5.094812 GCGCAAATGATCATTTTAGTGTCA 58.905 37.500 27.30 0.00 38.84 3.58
1911 2374 5.572511 GCGCAAATGATCATTTTAGTGTCAA 59.427 36.000 27.30 0.00 38.84 3.18
1912 2375 6.089283 GCGCAAATGATCATTTTAGTGTCAAA 59.911 34.615 27.30 0.00 38.84 2.69
1913 2376 7.359097 GCGCAAATGATCATTTTAGTGTCAAAA 60.359 33.333 27.30 0.00 38.84 2.44
1914 2377 8.157813 CGCAAATGATCATTTTAGTGTCAAAAG 58.842 33.333 27.30 14.37 38.84 2.27
1915 2378 8.981647 GCAAATGATCATTTTAGTGTCAAAAGT 58.018 29.630 27.30 2.63 38.84 2.66
1918 2381 7.928908 TGATCATTTTAGTGTCAAAAGTTGC 57.071 32.000 0.00 0.00 31.29 4.17
1919 2382 6.636447 TGATCATTTTAGTGTCAAAAGTTGCG 59.364 34.615 0.00 0.00 31.29 4.85
1920 2383 5.277825 TCATTTTAGTGTCAAAAGTTGCGG 58.722 37.500 0.00 0.00 31.29 5.69
1921 2384 4.705337 TTTTAGTGTCAAAAGTTGCGGT 57.295 36.364 0.00 0.00 0.00 5.68
1922 2385 3.684103 TTAGTGTCAAAAGTTGCGGTG 57.316 42.857 0.00 0.00 0.00 4.94
1923 2386 1.459450 AGTGTCAAAAGTTGCGGTGT 58.541 45.000 0.00 0.00 0.00 4.16
1924 2387 2.634600 AGTGTCAAAAGTTGCGGTGTA 58.365 42.857 0.00 0.00 0.00 2.90
1925 2388 2.353579 AGTGTCAAAAGTTGCGGTGTAC 59.646 45.455 0.00 0.00 0.00 2.90
1926 2389 2.096174 GTGTCAAAAGTTGCGGTGTACA 59.904 45.455 0.00 0.00 0.00 2.90
1927 2390 2.946329 TGTCAAAAGTTGCGGTGTACAT 59.054 40.909 0.00 0.00 0.00 2.29
1928 2391 3.378742 TGTCAAAAGTTGCGGTGTACATT 59.621 39.130 0.00 0.00 0.00 2.71
1929 2392 3.728718 GTCAAAAGTTGCGGTGTACATTG 59.271 43.478 0.00 0.00 0.00 2.82
1930 2393 3.628032 TCAAAAGTTGCGGTGTACATTGA 59.372 39.130 0.00 0.00 0.00 2.57
1931 2394 4.096532 TCAAAAGTTGCGGTGTACATTGAA 59.903 37.500 0.00 0.00 0.00 2.69
1932 2395 3.896648 AAGTTGCGGTGTACATTGAAG 57.103 42.857 0.00 0.00 0.00 3.02
1933 2396 2.846193 AGTTGCGGTGTACATTGAAGT 58.154 42.857 0.00 0.00 0.00 3.01
1934 2397 2.548057 AGTTGCGGTGTACATTGAAGTG 59.452 45.455 0.00 0.00 0.00 3.16
1935 2398 1.518325 TGCGGTGTACATTGAAGTGG 58.482 50.000 0.00 0.00 0.00 4.00
1936 2399 1.202710 TGCGGTGTACATTGAAGTGGT 60.203 47.619 0.00 0.00 0.00 4.16
1937 2400 1.196808 GCGGTGTACATTGAAGTGGTG 59.803 52.381 0.00 0.00 0.00 4.17
1938 2401 1.196808 CGGTGTACATTGAAGTGGTGC 59.803 52.381 0.00 0.00 0.00 5.01
1939 2402 2.226330 GGTGTACATTGAAGTGGTGCA 58.774 47.619 0.00 0.00 0.00 4.57
1940 2403 2.621055 GGTGTACATTGAAGTGGTGCAA 59.379 45.455 0.00 0.00 0.00 4.08
1941 2404 3.067461 GGTGTACATTGAAGTGGTGCAAA 59.933 43.478 0.00 0.00 0.00 3.68
1942 2405 4.440802 GGTGTACATTGAAGTGGTGCAAAA 60.441 41.667 0.00 0.00 0.00 2.44
1943 2406 5.105752 GTGTACATTGAAGTGGTGCAAAAA 58.894 37.500 0.00 0.00 0.00 1.94
1944 2407 5.005299 GTGTACATTGAAGTGGTGCAAAAAC 59.995 40.000 0.00 0.00 0.00 2.43
1945 2408 4.470334 ACATTGAAGTGGTGCAAAAACT 57.530 36.364 0.00 0.00 0.00 2.66
1946 2409 4.831107 ACATTGAAGTGGTGCAAAAACTT 58.169 34.783 9.09 9.09 36.87 2.66
1947 2410 4.630940 ACATTGAAGTGGTGCAAAAACTTG 59.369 37.500 13.05 4.33 34.37 3.16
1948 2411 3.244033 TGAAGTGGTGCAAAAACTTGG 57.756 42.857 13.05 0.00 34.37 3.61
1949 2412 2.828520 TGAAGTGGTGCAAAAACTTGGA 59.171 40.909 13.05 0.10 34.37 3.53
1950 2413 3.450457 TGAAGTGGTGCAAAAACTTGGAT 59.550 39.130 13.05 0.00 34.37 3.41
1951 2414 4.081198 TGAAGTGGTGCAAAAACTTGGATT 60.081 37.500 13.05 0.00 34.37 3.01
1952 2415 3.795877 AGTGGTGCAAAAACTTGGATTG 58.204 40.909 0.00 0.00 0.00 2.67
1953 2416 2.871633 GTGGTGCAAAAACTTGGATTGG 59.128 45.455 0.00 0.00 0.00 3.16
1954 2417 1.872952 GGTGCAAAAACTTGGATTGGC 59.127 47.619 0.00 0.00 0.00 4.52
1955 2418 1.872952 GTGCAAAAACTTGGATTGGCC 59.127 47.619 0.00 0.00 37.10 5.36
1956 2419 1.147473 GCAAAAACTTGGATTGGCCG 58.853 50.000 0.00 0.00 40.66 6.13
1957 2420 1.540146 GCAAAAACTTGGATTGGCCGT 60.540 47.619 0.00 0.00 40.66 5.68
1958 2421 2.134346 CAAAAACTTGGATTGGCCGTG 58.866 47.619 0.00 0.00 40.66 4.94
1959 2422 0.033366 AAAACTTGGATTGGCCGTGC 59.967 50.000 0.00 0.00 40.66 5.34
1960 2423 1.112315 AAACTTGGATTGGCCGTGCA 61.112 50.000 0.00 0.00 40.66 4.57
1961 2424 1.112315 AACTTGGATTGGCCGTGCAA 61.112 50.000 13.00 13.00 40.66 4.08
1962 2425 1.112315 ACTTGGATTGGCCGTGCAAA 61.112 50.000 14.23 0.00 40.66 3.68
1963 2426 0.247185 CTTGGATTGGCCGTGCAAAT 59.753 50.000 14.23 0.93 40.66 2.32
1964 2427 1.476085 CTTGGATTGGCCGTGCAAATA 59.524 47.619 14.23 0.00 40.66 1.40
1965 2428 0.814457 TGGATTGGCCGTGCAAATAC 59.186 50.000 0.00 2.21 40.66 1.89
1966 2429 0.814457 GGATTGGCCGTGCAAATACA 59.186 50.000 0.00 0.00 33.22 2.29
1967 2430 1.203523 GGATTGGCCGTGCAAATACAA 59.796 47.619 0.00 0.00 33.22 2.41
1968 2431 2.159114 GGATTGGCCGTGCAAATACAAT 60.159 45.455 0.00 7.42 33.22 2.71
1969 2432 2.360553 TTGGCCGTGCAAATACAATG 57.639 45.000 0.00 0.00 0.00 2.82
1970 2433 0.108898 TGGCCGTGCAAATACAATGC 60.109 50.000 0.00 0.00 44.08 3.56
1971 2434 0.173255 GGCCGTGCAAATACAATGCT 59.827 50.000 0.00 0.00 44.14 3.79
1972 2435 1.404047 GGCCGTGCAAATACAATGCTT 60.404 47.619 0.00 0.00 44.14 3.91
1973 2436 2.159310 GGCCGTGCAAATACAATGCTTA 60.159 45.455 0.00 0.00 44.14 3.09
1974 2437 3.490761 GGCCGTGCAAATACAATGCTTAT 60.491 43.478 0.00 0.00 44.14 1.73
1975 2438 3.730715 GCCGTGCAAATACAATGCTTATC 59.269 43.478 0.00 0.00 44.14 1.75
1976 2439 4.290155 CCGTGCAAATACAATGCTTATCC 58.710 43.478 0.00 0.00 44.14 2.59
1977 2440 4.290155 CGTGCAAATACAATGCTTATCCC 58.710 43.478 0.00 0.00 44.14 3.85
1978 2441 4.290155 GTGCAAATACAATGCTTATCCCG 58.710 43.478 0.00 0.00 44.14 5.14
1979 2442 3.951037 TGCAAATACAATGCTTATCCCGT 59.049 39.130 0.00 0.00 44.14 5.28
1980 2443 4.400884 TGCAAATACAATGCTTATCCCGTT 59.599 37.500 0.00 0.00 44.14 4.44
1981 2444 5.105554 TGCAAATACAATGCTTATCCCGTTT 60.106 36.000 0.00 0.00 44.14 3.60
1982 2445 5.231991 GCAAATACAATGCTTATCCCGTTTG 59.768 40.000 0.00 0.00 40.64 2.93
1983 2446 6.329496 CAAATACAATGCTTATCCCGTTTGT 58.671 36.000 0.00 0.00 0.00 2.83
1984 2447 7.476667 CAAATACAATGCTTATCCCGTTTGTA 58.523 34.615 0.00 0.00 0.00 2.41
1985 2448 7.817418 AATACAATGCTTATCCCGTTTGTAT 57.183 32.000 0.00 0.00 0.00 2.29
1986 2449 8.911918 AATACAATGCTTATCCCGTTTGTATA 57.088 30.769 6.56 0.00 0.00 1.47
1987 2450 9.515226 AATACAATGCTTATCCCGTTTGTATAT 57.485 29.630 6.56 0.00 0.00 0.86
1988 2451 7.202016 ACAATGCTTATCCCGTTTGTATATG 57.798 36.000 0.00 0.00 0.00 1.78
1989 2452 6.206634 ACAATGCTTATCCCGTTTGTATATGG 59.793 38.462 0.00 0.00 0.00 2.74
1990 2453 5.554437 TGCTTATCCCGTTTGTATATGGA 57.446 39.130 0.00 0.00 0.00 3.41
1991 2454 5.931294 TGCTTATCCCGTTTGTATATGGAA 58.069 37.500 0.00 0.00 0.00 3.53
1992 2455 6.539173 TGCTTATCCCGTTTGTATATGGAAT 58.461 36.000 0.00 0.00 0.00 3.01
1993 2456 6.653320 TGCTTATCCCGTTTGTATATGGAATC 59.347 38.462 0.00 0.00 0.00 2.52
1994 2457 6.879458 GCTTATCCCGTTTGTATATGGAATCT 59.121 38.462 0.00 0.00 0.00 2.40
1995 2458 7.064728 GCTTATCCCGTTTGTATATGGAATCTC 59.935 40.741 0.00 0.00 0.00 2.75
1996 2459 6.688073 ATCCCGTTTGTATATGGAATCTCT 57.312 37.500 0.00 0.00 0.00 3.10
1997 2460 5.853936 TCCCGTTTGTATATGGAATCTCTG 58.146 41.667 0.00 0.00 0.00 3.35
1998 2461 4.997395 CCCGTTTGTATATGGAATCTCTGG 59.003 45.833 0.00 0.00 0.00 3.86
1999 2462 5.454755 CCCGTTTGTATATGGAATCTCTGGT 60.455 44.000 0.00 0.00 0.00 4.00
2000 2463 5.466728 CCGTTTGTATATGGAATCTCTGGTG 59.533 44.000 0.00 0.00 0.00 4.17
2001 2464 6.049149 CGTTTGTATATGGAATCTCTGGTGT 58.951 40.000 0.00 0.00 0.00 4.16
2002 2465 6.201044 CGTTTGTATATGGAATCTCTGGTGTC 59.799 42.308 0.00 0.00 0.00 3.67
2003 2466 7.275920 GTTTGTATATGGAATCTCTGGTGTCT 58.724 38.462 0.00 0.00 0.00 3.41
2004 2467 8.421784 GTTTGTATATGGAATCTCTGGTGTCTA 58.578 37.037 0.00 0.00 0.00 2.59
2005 2468 7.767250 TGTATATGGAATCTCTGGTGTCTAG 57.233 40.000 0.00 0.00 0.00 2.43
2006 2469 6.721668 TGTATATGGAATCTCTGGTGTCTAGG 59.278 42.308 0.00 0.00 0.00 3.02
2007 2470 3.474798 TGGAATCTCTGGTGTCTAGGT 57.525 47.619 0.00 0.00 0.00 3.08
2008 2471 4.603094 TGGAATCTCTGGTGTCTAGGTA 57.397 45.455 0.00 0.00 0.00 3.08
2009 2472 4.279145 TGGAATCTCTGGTGTCTAGGTAC 58.721 47.826 0.00 0.00 0.00 3.34
2010 2473 3.315749 GGAATCTCTGGTGTCTAGGTACG 59.684 52.174 0.00 0.00 0.00 3.67
2011 2474 3.648507 ATCTCTGGTGTCTAGGTACGT 57.351 47.619 0.00 0.00 0.00 3.57
2012 2475 2.708051 TCTCTGGTGTCTAGGTACGTG 58.292 52.381 0.00 0.00 0.00 4.49
2013 2476 1.743958 CTCTGGTGTCTAGGTACGTGG 59.256 57.143 0.00 0.00 0.00 4.94
2014 2477 0.815734 CTGGTGTCTAGGTACGTGGG 59.184 60.000 0.00 0.00 0.00 4.61
2015 2478 0.612732 TGGTGTCTAGGTACGTGGGG 60.613 60.000 0.00 0.00 0.00 4.96
2016 2479 0.613012 GGTGTCTAGGTACGTGGGGT 60.613 60.000 0.00 0.00 0.00 4.95
2017 2480 0.813821 GTGTCTAGGTACGTGGGGTC 59.186 60.000 0.00 0.00 0.00 4.46
2018 2481 0.323725 TGTCTAGGTACGTGGGGTCC 60.324 60.000 0.00 0.00 0.00 4.46
2019 2482 1.077501 TCTAGGTACGTGGGGTCCG 60.078 63.158 0.00 0.00 0.00 4.79
2257 2721 2.618241 ACTTCGCTCAAAATTGCAGTGA 59.382 40.909 0.00 5.39 0.00 3.41
2261 2725 2.679450 GCTCAAAATTGCAGTGATGCA 58.321 42.857 0.00 0.00 43.81 3.96
2303 2770 0.034767 CTGCATTCCTGGGAGCTTGA 60.035 55.000 0.00 0.00 0.00 3.02
2469 5561 5.666969 TCGTCACAATTCTCGTTCAATTT 57.333 34.783 0.00 0.00 0.00 1.82
2543 5635 9.929722 TTATTTGATGTACTTCATGTAAATCGC 57.070 29.630 11.84 0.00 44.85 4.58
2545 5637 7.609760 TTGATGTACTTCATGTAAATCGCTT 57.390 32.000 11.84 0.00 44.85 4.68
2634 5726 3.785364 GATGAGACCCCTAGCTTCCTAT 58.215 50.000 0.00 0.00 0.00 2.57
2718 5840 2.209690 AAAAAGGTACATGGGGTCCG 57.790 50.000 0.00 0.00 0.00 4.79
2719 5841 0.323087 AAAAGGTACATGGGGTCCGC 60.323 55.000 0.00 0.00 0.00 5.54
2720 5842 1.205460 AAAGGTACATGGGGTCCGCT 61.205 55.000 7.55 0.00 0.00 5.52
2721 5843 1.623542 AAGGTACATGGGGTCCGCTC 61.624 60.000 7.55 0.00 0.00 5.03
2723 5845 1.442148 GTACATGGGGTCCGCTCTC 59.558 63.158 7.55 0.00 0.00 3.20
2725 5847 1.043116 TACATGGGGTCCGCTCTCAG 61.043 60.000 7.55 0.00 0.00 3.35
2726 5848 3.474570 ATGGGGTCCGCTCTCAGC 61.475 66.667 7.55 0.00 38.02 4.26
2735 5857 2.183046 GCTCTCAGCGACTGGACC 59.817 66.667 6.95 0.00 31.51 4.46
2736 5858 2.487428 CTCTCAGCGACTGGACCG 59.513 66.667 6.95 0.00 31.51 4.79
2737 5859 3.057547 CTCTCAGCGACTGGACCGG 62.058 68.421 0.00 0.00 31.51 5.28
2738 5860 4.135153 CTCAGCGACTGGACCGGG 62.135 72.222 6.32 0.00 31.51 5.73
2739 5861 4.671590 TCAGCGACTGGACCGGGA 62.672 66.667 6.32 0.00 31.51 5.14
2740 5862 3.691342 CAGCGACTGGACCGGGAA 61.691 66.667 6.32 0.00 0.00 3.97
2741 5863 3.382832 AGCGACTGGACCGGGAAG 61.383 66.667 6.32 2.07 0.00 3.46
2743 5865 3.691342 CGACTGGACCGGGAAGCA 61.691 66.667 6.32 0.00 0.00 3.91
2744 5866 2.266055 GACTGGACCGGGAAGCAG 59.734 66.667 6.32 0.00 0.00 4.24
2745 5867 3.316573 GACTGGACCGGGAAGCAGG 62.317 68.421 6.32 0.00 0.00 4.85
2749 5871 4.410400 GACCGGGAAGCAGGGGTG 62.410 72.222 6.32 0.00 31.66 4.61
2751 5873 4.722700 CCGGGAAGCAGGGGTGTG 62.723 72.222 0.00 0.00 0.00 3.82
2754 5876 2.282462 GGAAGCAGGGGTGTGTGG 60.282 66.667 0.00 0.00 0.00 4.17
2756 5878 4.603535 AAGCAGGGGTGTGTGGCC 62.604 66.667 0.00 0.00 0.00 5.36
2759 5881 4.666253 CAGGGGTGTGTGGCCTGG 62.666 72.222 3.32 0.00 0.00 4.45
2765 5887 0.179086 GGTGTGTGGCCTGGTTTTTG 60.179 55.000 3.32 0.00 0.00 2.44
2767 5889 0.534412 TGTGTGGCCTGGTTTTTGTG 59.466 50.000 3.32 0.00 0.00 3.33
2771 5893 2.303022 TGTGGCCTGGTTTTTGTGAAAA 59.697 40.909 3.32 0.00 32.53 2.29
2773 5895 3.944650 GTGGCCTGGTTTTTGTGAAAAAT 59.055 39.130 3.32 0.00 41.85 1.82
2774 5896 4.035091 GTGGCCTGGTTTTTGTGAAAAATC 59.965 41.667 3.32 0.00 41.85 2.17
2775 5897 3.563808 GGCCTGGTTTTTGTGAAAAATCC 59.436 43.478 0.00 4.72 40.03 3.01
2776 5898 3.563808 GCCTGGTTTTTGTGAAAAATCCC 59.436 43.478 0.00 0.00 40.03 3.85
2777 5899 4.685848 GCCTGGTTTTTGTGAAAAATCCCT 60.686 41.667 0.00 0.00 40.03 4.20
2778 5900 5.056480 CCTGGTTTTTGTGAAAAATCCCTC 58.944 41.667 8.02 0.00 40.03 4.30
2779 5901 5.029807 TGGTTTTTGTGAAAAATCCCTCC 57.970 39.130 8.02 0.00 40.03 4.30
2780 5902 4.055360 GGTTTTTGTGAAAAATCCCTCCG 58.945 43.478 0.00 0.00 41.85 4.63
2782 5904 5.353111 GTTTTTGTGAAAAATCCCTCCGAA 58.647 37.500 0.00 0.00 41.85 4.30
2783 5905 5.799827 TTTTGTGAAAAATCCCTCCGAAT 57.200 34.783 0.00 0.00 0.00 3.34
2784 5906 6.902771 TTTTGTGAAAAATCCCTCCGAATA 57.097 33.333 0.00 0.00 0.00 1.75
2785 5907 7.475137 TTTTGTGAAAAATCCCTCCGAATAT 57.525 32.000 0.00 0.00 0.00 1.28
2787 5909 8.760980 TTTGTGAAAAATCCCTCCGAATATAT 57.239 30.769 0.00 0.00 0.00 0.86
2788 5910 9.854668 TTTGTGAAAAATCCCTCCGAATATATA 57.145 29.630 0.00 0.00 0.00 0.86
2799 5921 9.854668 TCCCTCCGAATATATATTTTTCACAAA 57.145 29.630 9.33 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.878667 AGCAAATTCAACAATCATTATCATCAA 57.121 25.926 0.00 0.00 0.00 2.57
35 36 6.930731 ACAAAGAGCAACTTCTAACCAAAAA 58.069 32.000 0.00 0.00 37.93 1.94
103 106 3.782992 ACCGAAAAGGAGGGAGTACTTA 58.217 45.455 0.00 0.00 45.00 2.24
113 116 3.630769 GGGCCTAATAAACCGAAAAGGAG 59.369 47.826 0.84 0.00 45.00 3.69
120 123 5.836024 ATAAGATGGGCCTAATAAACCGA 57.164 39.130 4.53 0.00 0.00 4.69
155 158 1.530852 CGAAAAAGCGTTGTGTGCAGA 60.531 47.619 0.00 0.00 33.85 4.26
166 169 1.201812 CCGATGTCAGACGAAAAAGCG 60.202 52.381 0.00 0.00 37.29 4.68
189 192 4.826733 TGCAACATGATTTACTGTCTGGTT 59.173 37.500 0.00 0.00 0.00 3.67
196 199 7.433131 GGACATAACATGCAACATGATTTACTG 59.567 37.037 14.17 5.54 0.00 2.74
216 219 5.192927 GGATGATTCAGTTTGTGGGACATA 58.807 41.667 0.00 0.00 44.52 2.29
244 247 5.404366 GCAACACTTGTACGATTAGAGACAA 59.596 40.000 0.00 0.00 0.00 3.18
256 259 3.119495 GGATTCCCATGCAACACTTGTAC 60.119 47.826 0.00 0.00 0.00 2.90
267 270 3.402628 ACATACGTAGGATTCCCATGC 57.597 47.619 15.09 0.00 33.88 4.06
277 280 6.095160 GGACAATCCTCCTATACATACGTAGG 59.905 46.154 5.55 5.55 39.06 3.18
280 283 5.477291 CAGGACAATCCTCCTATACATACGT 59.523 44.000 0.00 0.00 45.66 3.57
285 288 3.653164 TGCAGGACAATCCTCCTATACA 58.347 45.455 0.00 0.00 45.66 2.29
304 307 6.319658 TGTCCTCCTTATTTGATGAGATTTGC 59.680 38.462 0.00 0.00 0.00 3.68
347 350 6.372659 GGGGTCATGTATGTAGCTTCAATATG 59.627 42.308 0.00 3.26 0.00 1.78
348 351 6.476378 GGGGTCATGTATGTAGCTTCAATAT 58.524 40.000 0.00 0.00 0.00 1.28
349 352 5.221843 GGGGGTCATGTATGTAGCTTCAATA 60.222 44.000 0.00 0.00 0.00 1.90
350 353 4.446311 GGGGGTCATGTATGTAGCTTCAAT 60.446 45.833 0.00 0.00 0.00 2.57
351 354 3.118038 GGGGGTCATGTATGTAGCTTCAA 60.118 47.826 0.00 0.00 0.00 2.69
352 355 2.438021 GGGGGTCATGTATGTAGCTTCA 59.562 50.000 0.00 0.00 0.00 3.02
353 356 3.127425 GGGGGTCATGTATGTAGCTTC 57.873 52.381 0.00 0.00 0.00 3.86
374 377 4.038402 GGAATCAACCAATGCATTAGGGAG 59.962 45.833 19.75 15.12 0.00 4.30
375 378 3.960102 GGAATCAACCAATGCATTAGGGA 59.040 43.478 19.75 12.01 0.00 4.20
376 379 3.705579 TGGAATCAACCAATGCATTAGGG 59.294 43.478 23.27 18.83 36.96 3.53
399 404 8.906636 AATTCTGTCAAATTTGATTCTCGATG 57.093 30.769 23.05 8.25 39.73 3.84
413 418 8.289618 GCAGTGTCTACATTAAATTCTGTCAAA 58.710 33.333 0.00 0.00 0.00 2.69
414 419 7.661437 AGCAGTGTCTACATTAAATTCTGTCAA 59.339 33.333 0.00 0.00 0.00 3.18
415 420 7.161404 AGCAGTGTCTACATTAAATTCTGTCA 58.839 34.615 0.00 0.00 0.00 3.58
416 421 7.602517 AGCAGTGTCTACATTAAATTCTGTC 57.397 36.000 0.00 0.00 0.00 3.51
438 443 9.535878 GGGAATAGTCAAATATAGCACTATAGC 57.464 37.037 0.00 0.00 32.05 2.97
443 448 9.780186 GTTTAGGGAATAGTCAAATATAGCACT 57.220 33.333 0.00 0.00 0.00 4.40
444 449 9.555727 TGTTTAGGGAATAGTCAAATATAGCAC 57.444 33.333 0.00 0.00 0.00 4.40
450 455 9.120538 GCTCATTGTTTAGGGAATAGTCAAATA 57.879 33.333 0.00 0.00 0.00 1.40
451 456 7.068716 GGCTCATTGTTTAGGGAATAGTCAAAT 59.931 37.037 0.00 0.00 0.00 2.32
452 457 6.377146 GGCTCATTGTTTAGGGAATAGTCAAA 59.623 38.462 0.00 0.00 0.00 2.69
453 458 5.885912 GGCTCATTGTTTAGGGAATAGTCAA 59.114 40.000 0.00 0.00 0.00 3.18
454 459 5.437060 GGCTCATTGTTTAGGGAATAGTCA 58.563 41.667 0.00 0.00 0.00 3.41
455 460 4.822350 GGGCTCATTGTTTAGGGAATAGTC 59.178 45.833 0.00 0.00 0.00 2.59
456 461 4.478686 AGGGCTCATTGTTTAGGGAATAGT 59.521 41.667 0.00 0.00 0.00 2.12
457 462 5.053978 AGGGCTCATTGTTTAGGGAATAG 57.946 43.478 0.00 0.00 0.00 1.73
458 463 6.584471 TTAGGGCTCATTGTTTAGGGAATA 57.416 37.500 0.00 0.00 0.00 1.75
459 464 5.466127 TTAGGGCTCATTGTTTAGGGAAT 57.534 39.130 0.00 0.00 0.00 3.01
460 465 4.938575 TTAGGGCTCATTGTTTAGGGAA 57.061 40.909 0.00 0.00 0.00 3.97
461 466 4.938575 TTTAGGGCTCATTGTTTAGGGA 57.061 40.909 0.00 0.00 0.00 4.20
462 467 6.126409 TGTATTTAGGGCTCATTGTTTAGGG 58.874 40.000 0.00 0.00 0.00 3.53
463 468 7.639113 TTGTATTTAGGGCTCATTGTTTAGG 57.361 36.000 0.00 0.00 0.00 2.69
464 469 9.353999 GTTTTGTATTTAGGGCTCATTGTTTAG 57.646 33.333 0.00 0.00 0.00 1.85
465 470 9.084533 AGTTTTGTATTTAGGGCTCATTGTTTA 57.915 29.630 0.00 0.00 0.00 2.01
466 471 7.962441 AGTTTTGTATTTAGGGCTCATTGTTT 58.038 30.769 0.00 0.00 0.00 2.83
467 472 7.539034 AGTTTTGTATTTAGGGCTCATTGTT 57.461 32.000 0.00 0.00 0.00 2.83
468 473 7.539034 AAGTTTTGTATTTAGGGCTCATTGT 57.461 32.000 0.00 0.00 0.00 2.71
469 474 9.573133 CTAAAGTTTTGTATTTAGGGCTCATTG 57.427 33.333 0.00 0.00 36.02 2.82
470 475 8.251026 GCTAAAGTTTTGTATTTAGGGCTCATT 58.749 33.333 0.00 0.00 38.73 2.57
471 476 7.615757 AGCTAAAGTTTTGTATTTAGGGCTCAT 59.384 33.333 0.00 0.00 38.73 2.90
472 477 6.946009 AGCTAAAGTTTTGTATTTAGGGCTCA 59.054 34.615 0.00 0.00 38.73 4.26
473 478 7.392494 AGCTAAAGTTTTGTATTTAGGGCTC 57.608 36.000 0.00 0.00 38.73 4.70
474 479 7.776618 AAGCTAAAGTTTTGTATTTAGGGCT 57.223 32.000 0.00 0.00 38.73 5.19
475 480 9.917129 TTAAAGCTAAAGTTTTGTATTTAGGGC 57.083 29.630 0.00 0.00 38.73 5.19
495 500 9.665264 CCCGAATTAGTCAAAATCTATTAAAGC 57.335 33.333 0.00 0.00 0.00 3.51
498 503 9.037737 CGTCCCGAATTAGTCAAAATCTATTAA 57.962 33.333 0.00 0.00 0.00 1.40
499 504 7.654520 CCGTCCCGAATTAGTCAAAATCTATTA 59.345 37.037 0.00 0.00 0.00 0.98
500 505 6.482308 CCGTCCCGAATTAGTCAAAATCTATT 59.518 38.462 0.00 0.00 0.00 1.73
501 506 5.989777 CCGTCCCGAATTAGTCAAAATCTAT 59.010 40.000 0.00 0.00 0.00 1.98
502 507 5.127519 TCCGTCCCGAATTAGTCAAAATCTA 59.872 40.000 0.00 0.00 0.00 1.98
503 508 4.081309 TCCGTCCCGAATTAGTCAAAATCT 60.081 41.667 0.00 0.00 0.00 2.40
504 509 4.186159 TCCGTCCCGAATTAGTCAAAATC 58.814 43.478 0.00 0.00 0.00 2.17
505 510 4.189231 CTCCGTCCCGAATTAGTCAAAAT 58.811 43.478 0.00 0.00 0.00 1.82
506 511 3.592059 CTCCGTCCCGAATTAGTCAAAA 58.408 45.455 0.00 0.00 0.00 2.44
507 512 2.093869 CCTCCGTCCCGAATTAGTCAAA 60.094 50.000 0.00 0.00 0.00 2.69
508 513 1.479323 CCTCCGTCCCGAATTAGTCAA 59.521 52.381 0.00 0.00 0.00 3.18
509 514 1.108776 CCTCCGTCCCGAATTAGTCA 58.891 55.000 0.00 0.00 0.00 3.41
510 515 0.388294 CCCTCCGTCCCGAATTAGTC 59.612 60.000 0.00 0.00 0.00 2.59
511 516 0.032813 TCCCTCCGTCCCGAATTAGT 60.033 55.000 0.00 0.00 0.00 2.24
512 517 1.117150 TTCCCTCCGTCCCGAATTAG 58.883 55.000 0.00 0.00 0.00 1.73
513 518 1.797320 ATTCCCTCCGTCCCGAATTA 58.203 50.000 0.00 0.00 0.00 1.40
514 519 1.797320 TATTCCCTCCGTCCCGAATT 58.203 50.000 0.00 0.00 0.00 2.17
515 520 2.025636 ATATTCCCTCCGTCCCGAAT 57.974 50.000 0.00 0.00 0.00 3.34
516 521 2.681319 TATATTCCCTCCGTCCCGAA 57.319 50.000 0.00 0.00 0.00 4.30
517 522 2.108776 TCTTATATTCCCTCCGTCCCGA 59.891 50.000 0.00 0.00 0.00 5.14
518 523 2.230750 GTCTTATATTCCCTCCGTCCCG 59.769 54.545 0.00 0.00 0.00 5.14
519 524 3.508426 AGTCTTATATTCCCTCCGTCCC 58.492 50.000 0.00 0.00 0.00 4.46
520 525 5.298347 CAAAGTCTTATATTCCCTCCGTCC 58.702 45.833 0.00 0.00 0.00 4.79
521 526 4.750598 GCAAAGTCTTATATTCCCTCCGTC 59.249 45.833 0.00 0.00 0.00 4.79
522 527 4.409247 AGCAAAGTCTTATATTCCCTCCGT 59.591 41.667 0.00 0.00 0.00 4.69
523 528 4.962155 AGCAAAGTCTTATATTCCCTCCG 58.038 43.478 0.00 0.00 0.00 4.63
524 529 6.711194 GGTTAGCAAAGTCTTATATTCCCTCC 59.289 42.308 0.00 0.00 0.00 4.30
525 530 7.510407 AGGTTAGCAAAGTCTTATATTCCCTC 58.490 38.462 0.00 0.00 0.00 4.30
526 531 7.453141 AGGTTAGCAAAGTCTTATATTCCCT 57.547 36.000 0.00 0.00 0.00 4.20
527 532 8.521170 AAAGGTTAGCAAAGTCTTATATTCCC 57.479 34.615 0.00 0.00 0.00 3.97
553 558 3.890147 ACCCTATAAACCACGTGCAAAAA 59.110 39.130 10.91 0.00 0.00 1.94
554 559 3.488363 ACCCTATAAACCACGTGCAAAA 58.512 40.909 10.91 0.00 0.00 2.44
555 560 3.143211 ACCCTATAAACCACGTGCAAA 57.857 42.857 10.91 0.00 0.00 3.68
556 561 2.863132 ACCCTATAAACCACGTGCAA 57.137 45.000 10.91 0.00 0.00 4.08
557 562 3.432467 CCATACCCTATAAACCACGTGCA 60.432 47.826 10.91 0.00 0.00 4.57
558 563 3.135994 CCATACCCTATAAACCACGTGC 58.864 50.000 10.91 0.00 0.00 5.34
559 564 3.135994 GCCATACCCTATAAACCACGTG 58.864 50.000 9.08 9.08 0.00 4.49
560 565 3.043418 AGCCATACCCTATAAACCACGT 58.957 45.455 0.00 0.00 0.00 4.49
561 566 3.764237 AGCCATACCCTATAAACCACG 57.236 47.619 0.00 0.00 0.00 4.94
562 567 6.183810 AGTTAGCCATACCCTATAAACCAC 57.816 41.667 0.00 0.00 0.00 4.16
563 568 6.835029 AAGTTAGCCATACCCTATAAACCA 57.165 37.500 0.00 0.00 0.00 3.67
564 569 7.284820 TGAAAGTTAGCCATACCCTATAAACC 58.715 38.462 0.00 0.00 0.00 3.27
565 570 8.919777 ATGAAAGTTAGCCATACCCTATAAAC 57.080 34.615 0.00 0.00 0.00 2.01
566 571 8.945193 AGATGAAAGTTAGCCATACCCTATAAA 58.055 33.333 0.00 0.00 0.00 1.40
567 572 8.506196 AGATGAAAGTTAGCCATACCCTATAA 57.494 34.615 0.00 0.00 0.00 0.98
568 573 9.256228 CTAGATGAAAGTTAGCCATACCCTATA 57.744 37.037 0.00 0.00 0.00 1.31
569 574 7.956315 TCTAGATGAAAGTTAGCCATACCCTAT 59.044 37.037 0.00 0.00 0.00 2.57
570 575 7.302948 TCTAGATGAAAGTTAGCCATACCCTA 58.697 38.462 0.00 0.00 0.00 3.53
571 576 6.143915 TCTAGATGAAAGTTAGCCATACCCT 58.856 40.000 0.00 0.00 0.00 4.34
572 577 6.420913 TCTAGATGAAAGTTAGCCATACCC 57.579 41.667 0.00 0.00 0.00 3.69
573 578 7.671302 TCATCTAGATGAAAGTTAGCCATACC 58.329 38.462 29.15 0.00 44.14 2.73
604 609 8.464404 CCATTGTCATTTACATGAGACTTGATT 58.536 33.333 0.00 0.00 40.28 2.57
605 610 7.613022 ACCATTGTCATTTACATGAGACTTGAT 59.387 33.333 0.00 0.00 40.28 2.57
606 611 6.942005 ACCATTGTCATTTACATGAGACTTGA 59.058 34.615 0.00 0.00 40.28 3.02
607 612 7.149569 ACCATTGTCATTTACATGAGACTTG 57.850 36.000 0.00 2.69 40.28 3.16
608 613 8.896744 CATACCATTGTCATTTACATGAGACTT 58.103 33.333 0.00 0.00 40.28 3.01
609 614 8.267183 TCATACCATTGTCATTTACATGAGACT 58.733 33.333 0.00 0.00 40.28 3.24
610 615 8.437360 TCATACCATTGTCATTTACATGAGAC 57.563 34.615 0.00 0.06 40.28 3.36
611 616 9.460019 TTTCATACCATTGTCATTTACATGAGA 57.540 29.630 0.00 0.00 40.28 3.27
636 641 6.761242 CGTGGGGATCTTTTCTTTTTCTTTTT 59.239 34.615 0.00 0.00 0.00 1.94
637 642 6.127168 ACGTGGGGATCTTTTCTTTTTCTTTT 60.127 34.615 0.00 0.00 0.00 2.27
638 643 5.362717 ACGTGGGGATCTTTTCTTTTTCTTT 59.637 36.000 0.00 0.00 0.00 2.52
639 644 4.893524 ACGTGGGGATCTTTTCTTTTTCTT 59.106 37.500 0.00 0.00 0.00 2.52
640 645 4.470602 ACGTGGGGATCTTTTCTTTTTCT 58.529 39.130 0.00 0.00 0.00 2.52
641 646 4.848562 ACGTGGGGATCTTTTCTTTTTC 57.151 40.909 0.00 0.00 0.00 2.29
642 647 6.719829 AGATTACGTGGGGATCTTTTCTTTTT 59.280 34.615 0.00 0.00 0.00 1.94
643 648 6.246163 AGATTACGTGGGGATCTTTTCTTTT 58.754 36.000 0.00 0.00 0.00 2.27
644 649 5.816682 AGATTACGTGGGGATCTTTTCTTT 58.183 37.500 0.00 0.00 0.00 2.52
645 650 5.429130 GAGATTACGTGGGGATCTTTTCTT 58.571 41.667 0.00 0.00 30.64 2.52
646 651 4.141688 GGAGATTACGTGGGGATCTTTTCT 60.142 45.833 0.00 0.00 30.64 2.52
647 652 4.127907 GGAGATTACGTGGGGATCTTTTC 58.872 47.826 0.00 0.00 30.64 2.29
648 653 3.431766 CGGAGATTACGTGGGGATCTTTT 60.432 47.826 0.00 0.00 30.64 2.27
649 654 2.102588 CGGAGATTACGTGGGGATCTTT 59.897 50.000 0.00 0.00 30.64 2.52
650 655 1.687123 CGGAGATTACGTGGGGATCTT 59.313 52.381 0.00 0.00 30.64 2.40
651 656 1.329256 CGGAGATTACGTGGGGATCT 58.671 55.000 0.00 1.66 33.05 2.75
652 657 1.038280 ACGGAGATTACGTGGGGATC 58.962 55.000 0.00 0.00 43.78 3.36
653 658 3.218974 ACGGAGATTACGTGGGGAT 57.781 52.632 0.00 0.00 43.78 3.85
654 659 4.770540 ACGGAGATTACGTGGGGA 57.229 55.556 0.00 0.00 43.78 4.81
659 664 4.771590 TGAGTTTACACGGAGATTACGT 57.228 40.909 0.00 0.00 46.82 3.57
660 665 7.113124 GTCATATGAGTTTACACGGAGATTACG 59.887 40.741 5.42 0.00 37.36 3.18
661 666 7.919091 TGTCATATGAGTTTACACGGAGATTAC 59.081 37.037 5.42 0.00 0.00 1.89
662 667 8.002984 TGTCATATGAGTTTACACGGAGATTA 57.997 34.615 5.42 0.00 0.00 1.75
663 668 6.873997 TGTCATATGAGTTTACACGGAGATT 58.126 36.000 5.42 0.00 0.00 2.40
664 669 6.465439 TGTCATATGAGTTTACACGGAGAT 57.535 37.500 5.42 0.00 0.00 2.75
665 670 5.907866 TGTCATATGAGTTTACACGGAGA 57.092 39.130 5.42 0.00 0.00 3.71
666 671 8.082242 TCATATGTCATATGAGTTTACACGGAG 58.918 37.037 25.33 2.15 44.85 4.63
667 672 7.947282 TCATATGTCATATGAGTTTACACGGA 58.053 34.615 25.33 5.25 44.85 4.69
711 716 9.950496 AACAAAGTCTCATCTAACTCATATGTT 57.050 29.630 1.90 0.00 0.00 2.71
758 763 1.068588 GCGAGGGCTTCCTTTGTTTTT 59.931 47.619 0.00 0.00 41.93 1.94
759 764 0.673985 GCGAGGGCTTCCTTTGTTTT 59.326 50.000 0.00 0.00 41.93 2.43
760 765 1.515521 CGCGAGGGCTTCCTTTGTTT 61.516 55.000 0.00 0.00 41.93 2.83
761 766 1.966451 CGCGAGGGCTTCCTTTGTT 60.966 57.895 0.00 0.00 41.93 2.83
762 767 2.358737 CGCGAGGGCTTCCTTTGT 60.359 61.111 0.00 0.00 41.93 2.83
763 768 2.358737 ACGCGAGGGCTTCCTTTG 60.359 61.111 15.93 0.00 41.93 2.77
808 813 0.391793 GCTCCTAAGTCCTGTGGTGC 60.392 60.000 0.00 0.00 33.07 5.01
815 820 0.526662 CGAACGTGCTCCTAAGTCCT 59.473 55.000 0.00 0.00 0.00 3.85
822 827 2.561885 CGTCTCGAACGTGCTCCT 59.438 61.111 10.63 0.00 46.42 3.69
840 845 2.166664 ACAAAGGCTCTGGAGTCGATAC 59.833 50.000 0.00 0.00 38.27 2.24
851 856 3.196685 GTCCATCTACTCACAAAGGCTCT 59.803 47.826 0.00 0.00 0.00 4.09
862 867 3.873952 GGTGCATCTTTGTCCATCTACTC 59.126 47.826 0.00 0.00 0.00 2.59
875 880 1.156736 CGTTTTCTCCGGTGCATCTT 58.843 50.000 0.00 0.00 0.00 2.40
876 881 0.320374 TCGTTTTCTCCGGTGCATCT 59.680 50.000 0.00 0.00 0.00 2.90
877 882 1.153353 TTCGTTTTCTCCGGTGCATC 58.847 50.000 0.00 0.00 0.00 3.91
878 883 1.265905 GTTTCGTTTTCTCCGGTGCAT 59.734 47.619 0.00 0.00 0.00 3.96
879 884 0.658897 GTTTCGTTTTCTCCGGTGCA 59.341 50.000 0.00 0.00 0.00 4.57
880 885 0.040692 GGTTTCGTTTTCTCCGGTGC 60.041 55.000 0.00 0.00 0.00 5.01
899 908 0.167470 CGTGCTGGAGTGCATCTTTG 59.833 55.000 0.00 0.00 45.23 2.77
993 1318 1.220169 TTTGGCAGTTTACGCGCGTA 61.220 50.000 36.55 36.55 0.00 4.42
1025 1350 3.385111 CAGAGAGACGGGTAGGCTTTATT 59.615 47.826 0.00 0.00 39.26 1.40
1026 1351 2.959707 CAGAGAGACGGGTAGGCTTTAT 59.040 50.000 0.00 0.00 39.26 1.40
1027 1352 2.376109 CAGAGAGACGGGTAGGCTTTA 58.624 52.381 0.00 0.00 39.26 1.85
1028 1353 1.187087 CAGAGAGACGGGTAGGCTTT 58.813 55.000 0.00 0.00 39.26 3.51
1029 1354 0.684805 CCAGAGAGACGGGTAGGCTT 60.685 60.000 0.00 0.00 39.26 4.35
1030 1355 1.076632 CCAGAGAGACGGGTAGGCT 60.077 63.158 0.00 0.00 44.42 4.58
1031 1356 1.380112 ACCAGAGAGACGGGTAGGC 60.380 63.158 0.00 0.00 44.69 3.93
1032 1357 0.256464 AGACCAGAGAGACGGGTAGG 59.744 60.000 0.00 0.00 46.35 3.18
1033 1358 1.210967 AGAGACCAGAGAGACGGGTAG 59.789 57.143 0.00 0.00 46.35 3.18
1034 1359 1.065345 CAGAGACCAGAGAGACGGGTA 60.065 57.143 0.00 0.00 46.35 3.69
1173 1498 2.034879 CAAGTCCATGAACGCGGCT 61.035 57.895 12.47 0.00 0.00 5.52
1649 1977 2.842462 AGGGATATGGTCGCGGCA 60.842 61.111 14.93 0.00 44.02 5.69
1656 1984 2.208872 AGGACTTTGCAGGGATATGGT 58.791 47.619 0.00 0.00 0.00 3.55
1749 2077 9.108449 CGAATATAGTACAAGAGAACGAATGAG 57.892 37.037 0.00 0.00 0.00 2.90
1861 2324 9.487790 CCAAGTTTTAACACCATCAATGTAATT 57.512 29.630 0.00 0.00 36.63 1.40
1862 2325 7.602265 GCCAAGTTTTAACACCATCAATGTAAT 59.398 33.333 0.00 0.00 0.00 1.89
1863 2326 6.926272 GCCAAGTTTTAACACCATCAATGTAA 59.074 34.615 0.00 0.00 0.00 2.41
1864 2327 6.451393 GCCAAGTTTTAACACCATCAATGTA 58.549 36.000 0.00 0.00 0.00 2.29
1865 2328 5.296748 GCCAAGTTTTAACACCATCAATGT 58.703 37.500 0.00 0.00 0.00 2.71
1866 2329 4.385447 CGCCAAGTTTTAACACCATCAATG 59.615 41.667 0.00 0.00 0.00 2.82
1867 2330 4.555262 CGCCAAGTTTTAACACCATCAAT 58.445 39.130 0.00 0.00 0.00 2.57
1868 2331 3.797184 GCGCCAAGTTTTAACACCATCAA 60.797 43.478 0.00 0.00 0.00 2.57
1869 2332 2.287909 GCGCCAAGTTTTAACACCATCA 60.288 45.455 0.00 0.00 0.00 3.07
1870 2333 2.287909 TGCGCCAAGTTTTAACACCATC 60.288 45.455 4.18 0.00 0.00 3.51
1871 2334 1.683917 TGCGCCAAGTTTTAACACCAT 59.316 42.857 4.18 0.00 0.00 3.55
1872 2335 1.103803 TGCGCCAAGTTTTAACACCA 58.896 45.000 4.18 0.00 0.00 4.17
1873 2336 2.211353 TTGCGCCAAGTTTTAACACC 57.789 45.000 4.18 0.00 0.00 4.16
1874 2337 3.799420 TCATTTGCGCCAAGTTTTAACAC 59.201 39.130 4.18 0.00 0.00 3.32
1875 2338 4.046938 TCATTTGCGCCAAGTTTTAACA 57.953 36.364 4.18 0.00 0.00 2.41
1876 2339 4.683781 TGATCATTTGCGCCAAGTTTTAAC 59.316 37.500 4.18 0.00 0.00 2.01
1877 2340 4.876125 TGATCATTTGCGCCAAGTTTTAA 58.124 34.783 4.18 0.00 0.00 1.52
1878 2341 4.511617 TGATCATTTGCGCCAAGTTTTA 57.488 36.364 4.18 0.00 0.00 1.52
1879 2342 3.383620 TGATCATTTGCGCCAAGTTTT 57.616 38.095 4.18 0.00 0.00 2.43
1880 2343 3.598019 ATGATCATTTGCGCCAAGTTT 57.402 38.095 4.18 0.00 0.00 2.66
1881 2344 3.598019 AATGATCATTTGCGCCAAGTT 57.402 38.095 15.36 0.00 0.00 2.66
1882 2345 3.598019 AAATGATCATTTGCGCCAAGT 57.402 38.095 28.57 5.37 39.36 3.16
1883 2346 5.005012 CACTAAAATGATCATTTGCGCCAAG 59.995 40.000 29.52 20.93 40.57 3.61
1884 2347 4.863689 CACTAAAATGATCATTTGCGCCAA 59.136 37.500 29.52 12.99 40.57 4.52
1885 2348 4.082300 ACACTAAAATGATCATTTGCGCCA 60.082 37.500 29.52 14.15 40.57 5.69
1886 2349 4.423732 ACACTAAAATGATCATTTGCGCC 58.576 39.130 29.52 0.00 40.57 6.53
1887 2350 5.094812 TGACACTAAAATGATCATTTGCGC 58.905 37.500 29.52 17.43 40.57 6.09
1888 2351 7.565450 TTTGACACTAAAATGATCATTTGCG 57.435 32.000 29.52 24.17 40.57 4.85
1889 2352 8.981647 ACTTTTGACACTAAAATGATCATTTGC 58.018 29.630 29.52 15.90 40.57 3.68
1892 2355 8.981647 GCAACTTTTGACACTAAAATGATCATT 58.018 29.630 15.36 15.36 0.00 2.57
1893 2356 7.326789 CGCAACTTTTGACACTAAAATGATCAT 59.673 33.333 1.18 1.18 0.00 2.45
1894 2357 6.636447 CGCAACTTTTGACACTAAAATGATCA 59.364 34.615 0.00 0.00 0.00 2.92
1895 2358 6.088085 CCGCAACTTTTGACACTAAAATGATC 59.912 38.462 0.00 0.00 0.00 2.92
1896 2359 5.920273 CCGCAACTTTTGACACTAAAATGAT 59.080 36.000 0.00 0.00 0.00 2.45
1897 2360 5.163602 ACCGCAACTTTTGACACTAAAATGA 60.164 36.000 0.00 0.00 0.00 2.57
1898 2361 5.040635 ACCGCAACTTTTGACACTAAAATG 58.959 37.500 0.00 0.00 0.00 2.32
1899 2362 5.040635 CACCGCAACTTTTGACACTAAAAT 58.959 37.500 0.00 0.00 0.00 1.82
1900 2363 4.082679 ACACCGCAACTTTTGACACTAAAA 60.083 37.500 0.00 0.00 0.00 1.52
1901 2364 3.440872 ACACCGCAACTTTTGACACTAAA 59.559 39.130 0.00 0.00 0.00 1.85
1902 2365 3.011119 ACACCGCAACTTTTGACACTAA 58.989 40.909 0.00 0.00 0.00 2.24
1903 2366 2.634600 ACACCGCAACTTTTGACACTA 58.365 42.857 0.00 0.00 0.00 2.74
1904 2367 1.459450 ACACCGCAACTTTTGACACT 58.541 45.000 0.00 0.00 0.00 3.55
1905 2368 2.096174 TGTACACCGCAACTTTTGACAC 59.904 45.455 0.00 0.00 0.00 3.67
1906 2369 2.357075 TGTACACCGCAACTTTTGACA 58.643 42.857 0.00 0.00 0.00 3.58
1907 2370 3.619233 ATGTACACCGCAACTTTTGAC 57.381 42.857 0.00 0.00 0.00 3.18
1908 2371 3.628032 TCAATGTACACCGCAACTTTTGA 59.372 39.130 0.00 0.00 0.00 2.69
1909 2372 3.958704 TCAATGTACACCGCAACTTTTG 58.041 40.909 0.00 0.00 0.00 2.44
1910 2373 4.097286 ACTTCAATGTACACCGCAACTTTT 59.903 37.500 0.00 0.00 0.00 2.27
1911 2374 3.630312 ACTTCAATGTACACCGCAACTTT 59.370 39.130 0.00 0.00 0.00 2.66
1912 2375 3.003275 CACTTCAATGTACACCGCAACTT 59.997 43.478 0.00 0.00 0.00 2.66
1913 2376 2.548057 CACTTCAATGTACACCGCAACT 59.452 45.455 0.00 0.00 0.00 3.16
1914 2377 2.350388 CCACTTCAATGTACACCGCAAC 60.350 50.000 0.00 0.00 0.00 4.17
1915 2378 1.876799 CCACTTCAATGTACACCGCAA 59.123 47.619 0.00 0.00 0.00 4.85
1916 2379 1.202710 ACCACTTCAATGTACACCGCA 60.203 47.619 0.00 0.00 0.00 5.69
1917 2380 1.196808 CACCACTTCAATGTACACCGC 59.803 52.381 0.00 0.00 0.00 5.68
1918 2381 1.196808 GCACCACTTCAATGTACACCG 59.803 52.381 0.00 0.00 0.00 4.94
1919 2382 2.226330 TGCACCACTTCAATGTACACC 58.774 47.619 0.00 0.00 0.00 4.16
1920 2383 3.980646 TTGCACCACTTCAATGTACAC 57.019 42.857 0.00 0.00 0.00 2.90
1921 2384 4.991153 TTTTGCACCACTTCAATGTACA 57.009 36.364 0.00 0.00 0.00 2.90
1922 2385 5.348164 AGTTTTTGCACCACTTCAATGTAC 58.652 37.500 0.00 0.00 0.00 2.90
1923 2386 5.590530 AGTTTTTGCACCACTTCAATGTA 57.409 34.783 0.00 0.00 0.00 2.29
1924 2387 4.470334 AGTTTTTGCACCACTTCAATGT 57.530 36.364 0.00 0.00 0.00 2.71
1925 2388 4.034279 CCAAGTTTTTGCACCACTTCAATG 59.966 41.667 2.08 0.00 32.79 2.82
1926 2389 4.081198 TCCAAGTTTTTGCACCACTTCAAT 60.081 37.500 2.08 0.00 32.79 2.57
1927 2390 3.259374 TCCAAGTTTTTGCACCACTTCAA 59.741 39.130 2.08 0.00 32.79 2.69
1928 2391 2.828520 TCCAAGTTTTTGCACCACTTCA 59.171 40.909 2.08 0.00 32.79 3.02
1929 2392 3.518634 TCCAAGTTTTTGCACCACTTC 57.481 42.857 2.08 0.00 32.79 3.01
1930 2393 4.190772 CAATCCAAGTTTTTGCACCACTT 58.809 39.130 0.00 0.00 32.79 3.16
1931 2394 3.432046 CCAATCCAAGTTTTTGCACCACT 60.432 43.478 0.00 0.00 32.79 4.00
1932 2395 2.871633 CCAATCCAAGTTTTTGCACCAC 59.128 45.455 0.00 0.00 32.79 4.16
1933 2396 2.744494 GCCAATCCAAGTTTTTGCACCA 60.744 45.455 0.00 0.00 32.79 4.17
1934 2397 1.872952 GCCAATCCAAGTTTTTGCACC 59.127 47.619 0.00 0.00 32.79 5.01
1935 2398 1.872952 GGCCAATCCAAGTTTTTGCAC 59.127 47.619 0.00 0.00 32.79 4.57
1936 2399 1.539929 CGGCCAATCCAAGTTTTTGCA 60.540 47.619 2.24 0.00 32.79 4.08
1937 2400 1.147473 CGGCCAATCCAAGTTTTTGC 58.853 50.000 2.24 0.00 32.79 3.68
1938 2401 2.134346 CACGGCCAATCCAAGTTTTTG 58.866 47.619 2.24 0.00 34.01 2.44
1939 2402 1.540146 GCACGGCCAATCCAAGTTTTT 60.540 47.619 2.24 0.00 34.01 1.94
1940 2403 0.033366 GCACGGCCAATCCAAGTTTT 59.967 50.000 2.24 0.00 34.01 2.43
1941 2404 1.112315 TGCACGGCCAATCCAAGTTT 61.112 50.000 2.24 0.00 34.01 2.66
1942 2405 1.112315 TTGCACGGCCAATCCAAGTT 61.112 50.000 2.24 0.00 34.01 2.66
1943 2406 1.112315 TTTGCACGGCCAATCCAAGT 61.112 50.000 2.24 0.00 34.01 3.16
1944 2407 0.247185 ATTTGCACGGCCAATCCAAG 59.753 50.000 2.24 0.00 34.01 3.61
1945 2408 1.203523 GTATTTGCACGGCCAATCCAA 59.796 47.619 2.24 0.00 34.01 3.53
1946 2409 0.814457 GTATTTGCACGGCCAATCCA 59.186 50.000 2.24 0.00 34.01 3.41
1947 2410 0.814457 TGTATTTGCACGGCCAATCC 59.186 50.000 2.24 0.00 0.00 3.01
1948 2411 2.645730 TTGTATTTGCACGGCCAATC 57.354 45.000 2.24 0.00 0.00 2.67
1949 2412 2.891112 CATTGTATTTGCACGGCCAAT 58.109 42.857 2.24 0.00 0.00 3.16
1950 2413 1.671261 GCATTGTATTTGCACGGCCAA 60.671 47.619 2.24 0.00 39.90 4.52
1951 2414 0.108898 GCATTGTATTTGCACGGCCA 60.109 50.000 2.24 0.00 39.90 5.36
1952 2415 0.173255 AGCATTGTATTTGCACGGCC 59.827 50.000 0.00 0.00 42.62 6.13
1953 2416 1.994916 AAGCATTGTATTTGCACGGC 58.005 45.000 0.00 0.00 42.62 5.68
1954 2417 4.290155 GGATAAGCATTGTATTTGCACGG 58.710 43.478 0.00 0.00 42.62 4.94
1955 2418 4.290155 GGGATAAGCATTGTATTTGCACG 58.710 43.478 0.00 0.00 42.62 5.34
1956 2419 4.202010 ACGGGATAAGCATTGTATTTGCAC 60.202 41.667 0.00 0.00 42.62 4.57
1957 2420 3.951037 ACGGGATAAGCATTGTATTTGCA 59.049 39.130 0.00 0.00 42.62 4.08
1958 2421 4.568152 ACGGGATAAGCATTGTATTTGC 57.432 40.909 0.00 0.00 40.45 3.68
1959 2422 6.329496 ACAAACGGGATAAGCATTGTATTTG 58.671 36.000 0.00 0.00 29.89 2.32
1960 2423 6.524101 ACAAACGGGATAAGCATTGTATTT 57.476 33.333 0.00 0.00 29.89 1.40
1961 2424 7.817418 ATACAAACGGGATAAGCATTGTATT 57.183 32.000 0.00 0.00 39.59 1.89
1962 2425 8.946085 CATATACAAACGGGATAAGCATTGTAT 58.054 33.333 12.06 12.06 42.96 2.29
1963 2426 7.389330 CCATATACAAACGGGATAAGCATTGTA 59.611 37.037 0.00 0.00 37.57 2.41
1964 2427 6.206634 CCATATACAAACGGGATAAGCATTGT 59.793 38.462 0.00 0.00 35.41 2.71
1965 2428 6.429692 TCCATATACAAACGGGATAAGCATTG 59.570 38.462 0.00 0.00 0.00 2.82
1966 2429 6.539173 TCCATATACAAACGGGATAAGCATT 58.461 36.000 0.00 0.00 0.00 3.56
1967 2430 6.121776 TCCATATACAAACGGGATAAGCAT 57.878 37.500 0.00 0.00 0.00 3.79
1968 2431 5.554437 TCCATATACAAACGGGATAAGCA 57.446 39.130 0.00 0.00 0.00 3.91
1969 2432 6.879458 AGATTCCATATACAAACGGGATAAGC 59.121 38.462 0.00 0.00 0.00 3.09
1970 2433 8.314751 AGAGATTCCATATACAAACGGGATAAG 58.685 37.037 0.00 0.00 0.00 1.73
1971 2434 8.094548 CAGAGATTCCATATACAAACGGGATAA 58.905 37.037 0.00 0.00 0.00 1.75
1972 2435 7.310423 CCAGAGATTCCATATACAAACGGGATA 60.310 40.741 0.00 0.00 0.00 2.59
1973 2436 6.467677 CAGAGATTCCATATACAAACGGGAT 58.532 40.000 0.00 0.00 0.00 3.85
1974 2437 5.221641 CCAGAGATTCCATATACAAACGGGA 60.222 44.000 0.00 0.00 0.00 5.14
1975 2438 4.997395 CCAGAGATTCCATATACAAACGGG 59.003 45.833 0.00 0.00 0.00 5.28
1976 2439 5.466728 CACCAGAGATTCCATATACAAACGG 59.533 44.000 0.00 0.00 0.00 4.44
1977 2440 6.049149 ACACCAGAGATTCCATATACAAACG 58.951 40.000 0.00 0.00 0.00 3.60
1978 2441 7.275920 AGACACCAGAGATTCCATATACAAAC 58.724 38.462 0.00 0.00 0.00 2.93
1979 2442 7.437713 AGACACCAGAGATTCCATATACAAA 57.562 36.000 0.00 0.00 0.00 2.83
1980 2443 7.233553 CCTAGACACCAGAGATTCCATATACAA 59.766 40.741 0.00 0.00 0.00 2.41
1981 2444 6.721668 CCTAGACACCAGAGATTCCATATACA 59.278 42.308 0.00 0.00 0.00 2.29
1982 2445 6.722129 ACCTAGACACCAGAGATTCCATATAC 59.278 42.308 0.00 0.00 0.00 1.47
1983 2446 6.864421 ACCTAGACACCAGAGATTCCATATA 58.136 40.000 0.00 0.00 0.00 0.86
1984 2447 5.721225 ACCTAGACACCAGAGATTCCATAT 58.279 41.667 0.00 0.00 0.00 1.78
1985 2448 5.144159 ACCTAGACACCAGAGATTCCATA 57.856 43.478 0.00 0.00 0.00 2.74
1986 2449 4.000928 ACCTAGACACCAGAGATTCCAT 57.999 45.455 0.00 0.00 0.00 3.41
1987 2450 3.474798 ACCTAGACACCAGAGATTCCA 57.525 47.619 0.00 0.00 0.00 3.53
1988 2451 3.315749 CGTACCTAGACACCAGAGATTCC 59.684 52.174 0.00 0.00 0.00 3.01
1989 2452 3.946558 ACGTACCTAGACACCAGAGATTC 59.053 47.826 0.00 0.00 0.00 2.52
1990 2453 3.695060 CACGTACCTAGACACCAGAGATT 59.305 47.826 0.00 0.00 0.00 2.40
1991 2454 3.280295 CACGTACCTAGACACCAGAGAT 58.720 50.000 0.00 0.00 0.00 2.75
1992 2455 2.617276 CCACGTACCTAGACACCAGAGA 60.617 54.545 0.00 0.00 0.00 3.10
1993 2456 1.743958 CCACGTACCTAGACACCAGAG 59.256 57.143 0.00 0.00 0.00 3.35
1994 2457 1.615116 CCCACGTACCTAGACACCAGA 60.615 57.143 0.00 0.00 0.00 3.86
1995 2458 0.815734 CCCACGTACCTAGACACCAG 59.184 60.000 0.00 0.00 0.00 4.00
1996 2459 0.612732 CCCCACGTACCTAGACACCA 60.613 60.000 0.00 0.00 0.00 4.17
1997 2460 0.613012 ACCCCACGTACCTAGACACC 60.613 60.000 0.00 0.00 0.00 4.16
1998 2461 0.813821 GACCCCACGTACCTAGACAC 59.186 60.000 0.00 0.00 0.00 3.67
1999 2462 0.323725 GGACCCCACGTACCTAGACA 60.324 60.000 0.00 0.00 0.00 3.41
2000 2463 1.379642 CGGACCCCACGTACCTAGAC 61.380 65.000 0.00 0.00 0.00 2.59
2001 2464 1.077501 CGGACCCCACGTACCTAGA 60.078 63.158 0.00 0.00 0.00 2.43
2002 2465 2.123428 CCGGACCCCACGTACCTAG 61.123 68.421 0.00 0.00 0.00 3.02
2003 2466 2.044053 CCGGACCCCACGTACCTA 60.044 66.667 0.00 0.00 0.00 3.08
2004 2467 3.951769 CTCCGGACCCCACGTACCT 62.952 68.421 0.00 0.00 0.00 3.08
2005 2468 3.455469 CTCCGGACCCCACGTACC 61.455 72.222 0.00 0.00 0.00 3.34
2006 2469 4.139234 GCTCCGGACCCCACGTAC 62.139 72.222 0.00 0.00 0.00 3.67
2007 2470 2.497792 TTAGCTCCGGACCCCACGTA 62.498 60.000 0.00 0.00 0.00 3.57
2008 2471 3.892104 TTAGCTCCGGACCCCACGT 62.892 63.158 0.00 0.00 0.00 4.49
2009 2472 2.175035 TTTTAGCTCCGGACCCCACG 62.175 60.000 0.00 0.00 0.00 4.94
2010 2473 0.255033 ATTTTAGCTCCGGACCCCAC 59.745 55.000 0.00 0.00 0.00 4.61
2011 2474 0.996583 AATTTTAGCTCCGGACCCCA 59.003 50.000 0.00 0.00 0.00 4.96
2012 2475 3.181448 TGATAATTTTAGCTCCGGACCCC 60.181 47.826 0.00 0.00 0.00 4.95
2013 2476 3.813724 GTGATAATTTTAGCTCCGGACCC 59.186 47.826 0.00 0.00 0.00 4.46
2014 2477 3.813724 GGTGATAATTTTAGCTCCGGACC 59.186 47.826 0.00 0.00 0.00 4.46
2015 2478 4.448210 TGGTGATAATTTTAGCTCCGGAC 58.552 43.478 0.00 0.00 35.95 4.79
2016 2479 4.764050 TGGTGATAATTTTAGCTCCGGA 57.236 40.909 2.93 2.93 35.95 5.14
2017 2480 5.063204 TGATGGTGATAATTTTAGCTCCGG 58.937 41.667 0.00 0.00 35.95 5.14
2018 2481 6.205464 ACATGATGGTGATAATTTTAGCTCCG 59.795 38.462 0.00 0.00 35.95 4.63
2019 2482 7.365741 CACATGATGGTGATAATTTTAGCTCC 58.634 38.462 0.00 0.88 41.32 4.70
2055 2518 5.752892 TGTTTTAACCTGTTGCGTGAATA 57.247 34.783 0.00 0.00 0.00 1.75
2196 2660 2.168936 TGATCTTTACCGTACCCGCATT 59.831 45.455 0.00 0.00 0.00 3.56
2469 5561 6.609616 CCAATTTCTAGTAAAATAGGGGCCAA 59.390 38.462 4.39 0.00 0.00 4.52
2707 5829 2.284625 TGAGAGCGGACCCCATGT 60.285 61.111 0.00 0.00 0.00 3.21
2708 5830 2.503061 CTGAGAGCGGACCCCATG 59.497 66.667 0.00 0.00 0.00 3.66
2718 5840 2.183046 GGTCCAGTCGCTGAGAGC 59.817 66.667 8.20 9.07 38.02 4.09
2719 5841 2.487428 CGGTCCAGTCGCTGAGAG 59.513 66.667 8.20 0.00 32.44 3.20
2720 5842 3.062466 CCGGTCCAGTCGCTGAGA 61.062 66.667 8.20 2.36 32.44 3.27
2721 5843 4.135153 CCCGGTCCAGTCGCTGAG 62.135 72.222 0.00 0.32 32.44 3.35
2723 5845 3.649277 CTTCCCGGTCCAGTCGCTG 62.649 68.421 0.00 0.52 0.00 5.18
2726 5848 3.649277 CTGCTTCCCGGTCCAGTCG 62.649 68.421 0.00 0.00 0.00 4.18
2727 5849 2.266055 CTGCTTCCCGGTCCAGTC 59.734 66.667 0.00 0.00 0.00 3.51
2728 5850 3.322466 CCTGCTTCCCGGTCCAGT 61.322 66.667 0.00 0.00 0.00 4.00
2734 5856 4.722700 CACACCCCTGCTTCCCGG 62.723 72.222 0.00 0.00 0.00 5.73
2735 5857 3.953775 ACACACCCCTGCTTCCCG 61.954 66.667 0.00 0.00 0.00 5.14
2736 5858 2.282462 CACACACCCCTGCTTCCC 60.282 66.667 0.00 0.00 0.00 3.97
2737 5859 2.282462 CCACACACCCCTGCTTCC 60.282 66.667 0.00 0.00 0.00 3.46
2738 5860 2.985847 GCCACACACCCCTGCTTC 60.986 66.667 0.00 0.00 0.00 3.86
2739 5861 4.603535 GGCCACACACCCCTGCTT 62.604 66.667 0.00 0.00 0.00 3.91
2742 5864 4.666253 CCAGGCCACACACCCCTG 62.666 72.222 5.01 0.00 44.49 4.45
2744 5866 3.749284 AAACCAGGCCACACACCCC 62.749 63.158 5.01 0.00 0.00 4.95
2745 5867 1.334384 AAAAACCAGGCCACACACCC 61.334 55.000 5.01 0.00 0.00 4.61
2749 5871 0.820871 TCACAAAAACCAGGCCACAC 59.179 50.000 5.01 0.00 0.00 3.82
2751 5873 2.682155 TTTCACAAAAACCAGGCCAC 57.318 45.000 5.01 0.00 0.00 5.01
2754 5876 3.563808 GGGATTTTTCACAAAAACCAGGC 59.436 43.478 8.47 0.00 43.49 4.85
2756 5878 5.056480 GGAGGGATTTTTCACAAAAACCAG 58.944 41.667 8.47 0.00 43.49 4.00
2759 5881 4.939271 TCGGAGGGATTTTTCACAAAAAC 58.061 39.130 0.00 0.00 42.57 2.43
2760 5882 5.599999 TTCGGAGGGATTTTTCACAAAAA 57.400 34.783 0.00 0.00 43.76 1.94
2773 5895 9.854668 TTTGTGAAAAATATATATTCGGAGGGA 57.145 29.630 8.42 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.