Multiple sequence alignment - TraesCS2B01G400200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G400200 chr2B 100.000 2843 0 0 1 2843 568633784 568636626 0.000000e+00 5251.0
1 TraesCS2B01G400200 chr2D 94.229 1750 72 21 674 2411 483784980 483786712 0.000000e+00 2645.0
2 TraesCS2B01G400200 chr2D 93.357 572 34 3 1 571 483784367 483784935 0.000000e+00 843.0
3 TraesCS2B01G400200 chr2D 95.250 400 17 2 2446 2843 330209669 330210068 1.440000e-177 632.0
4 TraesCS2B01G400200 chr2D 100.000 40 0 0 2410 2449 483786991 483787030 1.090000e-09 75.0
5 TraesCS2B01G400200 chr2D 96.774 31 1 0 2154 2184 13445472 13445502 5.000000e-03 52.8
6 TraesCS2B01G400200 chr2A 92.867 1514 64 18 585 2082 627609917 627611402 0.000000e+00 2158.0
7 TraesCS2B01G400200 chr2A 86.379 580 62 10 1 571 627609359 627609930 4.020000e-173 617.0
8 TraesCS2B01G400200 chr2A 86.667 270 30 3 2140 2409 627611411 627611674 7.700000e-76 294.0
9 TraesCS2B01G400200 chr1D 97.000 400 10 2 2446 2843 247835974 247836373 0.000000e+00 671.0
10 TraesCS2B01G400200 chr1D 96.250 400 13 2 2446 2843 206087781 206087382 0.000000e+00 654.0
11 TraesCS2B01G400200 chr5A 96.500 400 12 2 2446 2843 494397613 494397214 0.000000e+00 660.0
12 TraesCS2B01G400200 chr5A 96.000 400 14 2 2446 2843 547113988 547114387 0.000000e+00 649.0
13 TraesCS2B01G400200 chr1A 96.250 400 13 2 2446 2843 98492658 98493057 0.000000e+00 654.0
14 TraesCS2B01G400200 chr4A 95.500 400 16 2 2446 2843 724238490 724238889 3.090000e-179 638.0
15 TraesCS2B01G400200 chr3A 95.000 400 18 2 2446 2843 741173121 741173520 6.690000e-176 627.0
16 TraesCS2B01G400200 chr3A 95.000 400 18 2 2446 2843 741193841 741194240 6.690000e-176 627.0
17 TraesCS2B01G400200 chr1B 89.320 206 21 1 2206 2411 378887078 378886874 1.010000e-64 257.0
18 TraesCS2B01G400200 chr1B 87.963 216 24 2 2196 2411 378878023 378877810 1.310000e-63 254.0
19 TraesCS2B01G400200 chr1B 88.350 206 23 1 2206 2411 385103494 385103290 2.190000e-61 246.0
20 TraesCS2B01G400200 chr5D 88.889 207 21 2 2206 2411 110472524 110472319 1.310000e-63 254.0
21 TraesCS2B01G400200 chr7B 88.670 203 22 1 2206 2408 36648719 36648920 2.190000e-61 246.0
22 TraesCS2B01G400200 chr7B 85.185 189 27 1 1636 1823 428921207 428921019 2.890000e-45 193.0
23 TraesCS2B01G400200 chr7B 86.667 150 20 0 1184 1333 428921490 428921341 1.750000e-37 167.0
24 TraesCS2B01G400200 chr6B 87.619 210 25 1 2199 2408 558470534 558470742 2.830000e-60 243.0
25 TraesCS2B01G400200 chr3B 87.143 210 25 2 2199 2408 125720872 125721079 1.320000e-58 237.0
26 TraesCS2B01G400200 chr7A 86.316 190 23 3 1636 1823 476936086 476935898 1.340000e-48 204.0
27 TraesCS2B01G400200 chr7A 88.000 150 18 0 1184 1333 476936369 476936220 8.090000e-41 178.0
28 TraesCS2B01G400200 chr7D 84.694 196 28 2 1629 1823 414489579 414489385 8.040000e-46 195.0
29 TraesCS2B01G400200 chr7D 88.000 150 18 0 1184 1333 414489856 414489707 8.090000e-41 178.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G400200 chr2B 568633784 568636626 2842 False 5251.000000 5251 100.000000 1 2843 1 chr2B.!!$F1 2842
1 TraesCS2B01G400200 chr2D 483784367 483787030 2663 False 1187.666667 2645 95.862000 1 2449 3 chr2D.!!$F3 2448
2 TraesCS2B01G400200 chr2A 627609359 627611674 2315 False 1023.000000 2158 88.637667 1 2409 3 chr2A.!!$F1 2408

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
609 622 0.807496 GCAGATGTTGAGGCAGTTCC 59.193 55.0 0.0 0.0 0.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2573 2901 0.037326 GTGAACGGTCTCATGCAGGA 60.037 55.0 0.33 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 1.069204 AGTCGTGTGCTTCATGTGACT 59.931 47.619 0.00 0.00 33.94 3.41
60 62 2.124983 CATGTGACTGCGAGGGGG 60.125 66.667 0.00 0.00 0.00 5.40
86 88 2.481185 GAGGGTATTTTTCGTGCGTTCA 59.519 45.455 0.00 0.00 0.00 3.18
95 97 2.078849 TCGTGCGTTCATCATGAAGT 57.921 45.000 0.00 0.00 37.00 3.01
131 134 2.444421 AGGGACTCACGAATCTAACGT 58.556 47.619 0.00 0.00 44.83 3.99
145 148 2.494471 TCTAACGTTGCTAGGCTGCTTA 59.506 45.455 11.99 0.00 0.00 3.09
153 156 1.599542 GCTAGGCTGCTTAATCCAACG 59.400 52.381 0.00 0.00 0.00 4.10
158 161 1.164411 CTGCTTAATCCAACGCCACA 58.836 50.000 0.00 0.00 0.00 4.17
165 168 3.430862 CCAACGCCACATGGGACG 61.431 66.667 0.71 0.71 40.01 4.79
262 265 3.011595 ACATGGAGGATGAAATTGGGACA 59.988 43.478 0.00 0.00 35.80 4.02
308 311 2.435586 CTGGGCCACTTCAGAGCG 60.436 66.667 0.00 0.00 33.11 5.03
490 497 6.309980 CGAGGCTATAGCAAGTGATCATTTAG 59.690 42.308 25.53 0.00 44.36 1.85
519 531 6.528537 TGGTTCAAAATGCTAATATGCAGT 57.471 33.333 0.00 0.00 46.71 4.40
521 533 6.152492 TGGTTCAAAATGCTAATATGCAGTCA 59.848 34.615 0.00 0.00 46.71 3.41
562 575 4.021807 TGGCACGACTTCATAAGTAACAGA 60.022 41.667 0.00 0.00 43.03 3.41
563 576 4.563184 GGCACGACTTCATAAGTAACAGAG 59.437 45.833 0.00 0.00 43.03 3.35
564 577 4.031878 GCACGACTTCATAAGTAACAGAGC 59.968 45.833 0.00 0.00 43.03 4.09
565 578 5.161358 CACGACTTCATAAGTAACAGAGCA 58.839 41.667 0.00 0.00 43.03 4.26
566 579 5.287274 CACGACTTCATAAGTAACAGAGCAG 59.713 44.000 0.00 0.00 43.03 4.24
567 580 5.183331 ACGACTTCATAAGTAACAGAGCAGA 59.817 40.000 0.00 0.00 43.03 4.26
568 581 6.127591 ACGACTTCATAAGTAACAGAGCAGAT 60.128 38.462 0.00 0.00 43.03 2.90
569 582 6.198029 CGACTTCATAAGTAACAGAGCAGATG 59.802 42.308 0.00 0.00 43.03 2.90
570 583 6.940739 ACTTCATAAGTAACAGAGCAGATGT 58.059 36.000 0.00 0.00 40.69 3.06
571 584 7.390027 ACTTCATAAGTAACAGAGCAGATGTT 58.610 34.615 6.47 6.47 40.69 2.71
572 585 7.880195 ACTTCATAAGTAACAGAGCAGATGTTT 59.120 33.333 6.53 0.00 40.69 2.83
573 586 8.621532 TTCATAAGTAACAGAGCAGATGTTTT 57.378 30.769 6.53 0.43 41.08 2.43
574 587 8.621532 TCATAAGTAACAGAGCAGATGTTTTT 57.378 30.769 6.53 5.44 41.08 1.94
598 611 6.449635 TTTTTACACAACAGAGCAGATGTT 57.550 33.333 0.00 0.00 41.47 2.71
609 622 0.807496 GCAGATGTTGAGGCAGTTCC 59.193 55.000 0.00 0.00 0.00 3.62
622 635 4.723309 AGGCAGTTCCTCCATGATTATTC 58.277 43.478 0.00 0.00 43.20 1.75
623 636 4.166725 AGGCAGTTCCTCCATGATTATTCA 59.833 41.667 0.00 0.00 43.20 2.57
624 637 5.075493 GGCAGTTCCTCCATGATTATTCAT 58.925 41.667 0.00 0.00 43.51 2.57
625 638 5.182760 GGCAGTTCCTCCATGATTATTCATC 59.817 44.000 0.00 0.00 40.70 2.92
626 639 5.106791 GCAGTTCCTCCATGATTATTCATCG 60.107 44.000 0.00 0.00 40.70 3.84
627 640 4.999950 AGTTCCTCCATGATTATTCATCGC 59.000 41.667 0.00 0.00 40.70 4.58
645 658 0.959372 GCACATTGTGAGAGCTGGCT 60.959 55.000 20.77 0.00 35.23 4.75
702 715 2.169146 GCTTGGCGCATGCATTTCC 61.169 57.895 19.57 12.83 45.35 3.13
713 726 1.243342 TGCATTTCCGAGCAGTTGGG 61.243 55.000 0.00 0.00 35.51 4.12
747 760 2.672996 CCACTCCCACAAAGCCCG 60.673 66.667 0.00 0.00 0.00 6.13
776 789 1.358152 CACAACCCTCCCAACCTCTA 58.642 55.000 0.00 0.00 0.00 2.43
794 807 4.282195 CCTCTACACAAACTTCTCCACTCT 59.718 45.833 0.00 0.00 0.00 3.24
800 813 7.482169 ACACAAACTTCTCCACTCTATGATA 57.518 36.000 0.00 0.00 0.00 2.15
802 815 7.179338 ACACAAACTTCTCCACTCTATGATAGT 59.821 37.037 0.00 0.00 0.00 2.12
803 816 7.704472 CACAAACTTCTCCACTCTATGATAGTC 59.296 40.741 0.00 0.00 0.00 2.59
804 817 6.627395 AACTTCTCCACTCTATGATAGTCG 57.373 41.667 0.00 0.00 0.00 4.18
805 818 5.686753 ACTTCTCCACTCTATGATAGTCGT 58.313 41.667 0.00 0.00 0.00 4.34
806 819 5.761234 ACTTCTCCACTCTATGATAGTCGTC 59.239 44.000 0.00 0.00 0.00 4.20
807 820 5.554437 TCTCCACTCTATGATAGTCGTCT 57.446 43.478 0.00 0.00 0.00 4.18
819 834 4.271291 TGATAGTCGTCTCTCACTCATTCG 59.729 45.833 0.00 0.00 0.00 3.34
841 856 2.025416 CACCATACCCAACTCATCCCAA 60.025 50.000 0.00 0.00 0.00 4.12
853 868 3.292481 ATCCCAACAGGCAGCAGGG 62.292 63.158 0.00 1.36 40.98 4.45
855 870 4.980702 CCAACAGGCAGCAGGGCA 62.981 66.667 0.00 0.00 46.44 5.36
858 873 3.951769 AACAGGCAGCAGGGCATCC 62.952 63.158 0.00 0.00 46.44 3.51
918 933 4.734398 TCAAATCAAACACAAGCACCTT 57.266 36.364 0.00 0.00 0.00 3.50
958 976 1.078356 GAAACCCCGCCTTCTCCTC 60.078 63.158 0.00 0.00 0.00 3.71
959 977 1.539124 AAACCCCGCCTTCTCCTCT 60.539 57.895 0.00 0.00 0.00 3.69
960 978 1.554583 AAACCCCGCCTTCTCCTCTC 61.555 60.000 0.00 0.00 0.00 3.20
1159 1195 0.608035 GTTCCCCATGCGGTTCTTCA 60.608 55.000 0.00 0.00 0.00 3.02
1343 1379 2.431683 GGCCTTCCTGTCAGTGCA 59.568 61.111 0.00 0.00 0.00 4.57
1353 1395 1.657594 CTGTCAGTGCACATCATCGAC 59.342 52.381 21.04 14.53 0.00 4.20
1462 1504 0.253160 ACCTGCTGTTATCCCTCCCA 60.253 55.000 0.00 0.00 0.00 4.37
1922 1969 5.517322 AACCGTGCCTGTGTTTTTAAATA 57.483 34.783 0.00 0.00 0.00 1.40
1927 1974 5.442649 CGTGCCTGTGTTTTTAAATATTGCG 60.443 40.000 0.00 0.00 0.00 4.85
1963 2010 7.986889 AGTTTCCTTTCTGCATTTGTGTAATTT 59.013 29.630 0.00 0.00 0.00 1.82
2132 2180 4.016444 ACAGCGGAACAATGTTTATGGAT 58.984 39.130 0.00 0.00 0.00 3.41
2133 2181 4.462483 ACAGCGGAACAATGTTTATGGATT 59.538 37.500 0.00 0.00 0.00 3.01
2134 2182 5.047377 ACAGCGGAACAATGTTTATGGATTT 60.047 36.000 0.00 0.00 0.00 2.17
2169 2217 3.406512 AGATAGGTGTGGCTAGGTCTT 57.593 47.619 0.00 0.00 0.00 3.01
2194 2242 2.414293 CGACCGAGACTCAGTTAAGTGG 60.414 54.545 10.39 4.17 0.00 4.00
2246 2294 0.966920 CTAGTTGGGTCACACTCGGT 59.033 55.000 0.00 0.00 0.00 4.69
2260 2308 3.099141 CACTCGGTAGGTTTACCCCTAA 58.901 50.000 0.00 0.00 45.56 2.69
2278 2326 6.072119 ACCCCTAATTTCTGAAAACAATCGTC 60.072 38.462 6.95 0.00 0.00 4.20
2324 2372 4.651503 TCTTATGTTTTTGCCCTTTGACCA 59.348 37.500 0.00 0.00 0.00 4.02
2449 2777 7.394816 AGAATGCCAGTTAGCTCTTAAACTTA 58.605 34.615 0.00 0.00 33.72 2.24
2450 2778 7.883311 AGAATGCCAGTTAGCTCTTAAACTTAA 59.117 33.333 0.00 0.00 33.72 1.85
2451 2779 8.581253 AATGCCAGTTAGCTCTTAAACTTAAT 57.419 30.769 0.00 0.00 33.72 1.40
2452 2780 7.377766 TGCCAGTTAGCTCTTAAACTTAATG 57.622 36.000 0.00 0.00 33.72 1.90
2453 2781 6.940298 TGCCAGTTAGCTCTTAAACTTAATGT 59.060 34.615 0.00 0.00 33.72 2.71
2454 2782 7.119262 TGCCAGTTAGCTCTTAAACTTAATGTC 59.881 37.037 0.00 0.00 33.72 3.06
2455 2783 7.119262 GCCAGTTAGCTCTTAAACTTAATGTCA 59.881 37.037 0.00 0.00 33.72 3.58
2456 2784 8.660373 CCAGTTAGCTCTTAAACTTAATGTCAG 58.340 37.037 0.00 0.00 33.72 3.51
2457 2785 8.171840 CAGTTAGCTCTTAAACTTAATGTCAGC 58.828 37.037 0.00 0.00 33.72 4.26
2458 2786 8.097662 AGTTAGCTCTTAAACTTAATGTCAGCT 58.902 33.333 0.00 0.00 38.27 4.24
2459 2787 8.722394 GTTAGCTCTTAAACTTAATGTCAGCTT 58.278 33.333 0.00 0.00 36.19 3.74
2460 2788 7.371126 AGCTCTTAAACTTAATGTCAGCTTC 57.629 36.000 0.00 0.00 30.46 3.86
2461 2789 6.936900 AGCTCTTAAACTTAATGTCAGCTTCA 59.063 34.615 0.00 0.00 30.46 3.02
2462 2790 7.445402 AGCTCTTAAACTTAATGTCAGCTTCAA 59.555 33.333 0.00 0.00 30.46 2.69
2463 2791 8.076178 GCTCTTAAACTTAATGTCAGCTTCAAA 58.924 33.333 0.00 0.00 0.00 2.69
2464 2792 9.950680 CTCTTAAACTTAATGTCAGCTTCAAAA 57.049 29.630 0.00 0.00 0.00 2.44
2470 2798 9.598517 AACTTAATGTCAGCTTCAAAATTTTCA 57.401 25.926 0.00 0.00 0.00 2.69
2471 2799 9.034544 ACTTAATGTCAGCTTCAAAATTTTCAC 57.965 29.630 0.00 0.00 0.00 3.18
2472 2800 6.849588 AATGTCAGCTTCAAAATTTTCACC 57.150 33.333 0.00 0.00 0.00 4.02
2473 2801 5.336150 TGTCAGCTTCAAAATTTTCACCA 57.664 34.783 0.00 0.00 0.00 4.17
2474 2802 5.728471 TGTCAGCTTCAAAATTTTCACCAA 58.272 33.333 0.00 0.00 0.00 3.67
2475 2803 6.169094 TGTCAGCTTCAAAATTTTCACCAAA 58.831 32.000 0.00 0.00 0.00 3.28
2476 2804 6.313411 TGTCAGCTTCAAAATTTTCACCAAAG 59.687 34.615 0.00 2.14 0.00 2.77
2477 2805 6.313658 GTCAGCTTCAAAATTTTCACCAAAGT 59.686 34.615 0.00 0.00 0.00 2.66
2478 2806 7.491048 GTCAGCTTCAAAATTTTCACCAAAGTA 59.509 33.333 0.00 0.00 0.00 2.24
2479 2807 7.706179 TCAGCTTCAAAATTTTCACCAAAGTAG 59.294 33.333 0.00 0.00 0.00 2.57
2480 2808 6.479990 AGCTTCAAAATTTTCACCAAAGTAGC 59.520 34.615 0.00 3.48 0.00 3.58
2481 2809 6.479990 GCTTCAAAATTTTCACCAAAGTAGCT 59.520 34.615 0.00 0.00 0.00 3.32
2482 2810 7.651704 GCTTCAAAATTTTCACCAAAGTAGCTA 59.348 33.333 0.00 0.00 0.00 3.32
2483 2811 8.865590 TTCAAAATTTTCACCAAAGTAGCTAC 57.134 30.769 16.43 16.43 0.00 3.58
2484 2812 7.136119 TCAAAATTTTCACCAAAGTAGCTACG 58.864 34.615 17.99 6.60 0.00 3.51
2485 2813 6.870971 AAATTTTCACCAAAGTAGCTACGA 57.129 33.333 17.99 5.57 0.00 3.43
2486 2814 6.870971 AATTTTCACCAAAGTAGCTACGAA 57.129 33.333 17.99 11.20 0.00 3.85
2487 2815 7.448748 AATTTTCACCAAAGTAGCTACGAAT 57.551 32.000 17.99 6.17 0.00 3.34
2488 2816 8.556213 AATTTTCACCAAAGTAGCTACGAATA 57.444 30.769 17.99 9.66 0.00 1.75
2489 2817 7.591006 TTTTCACCAAAGTAGCTACGAATAG 57.409 36.000 17.99 9.78 0.00 1.73
2490 2818 5.258456 TCACCAAAGTAGCTACGAATAGG 57.742 43.478 17.99 17.28 0.00 2.57
2491 2819 4.708421 TCACCAAAGTAGCTACGAATAGGT 59.292 41.667 17.99 17.85 41.95 3.08
2492 2820 5.186409 TCACCAAAGTAGCTACGAATAGGTT 59.814 40.000 17.99 2.46 39.81 3.50
2493 2821 6.377996 TCACCAAAGTAGCTACGAATAGGTTA 59.622 38.462 17.99 11.25 39.81 2.85
2494 2822 7.037438 CACCAAAGTAGCTACGAATAGGTTAA 58.963 38.462 17.99 0.00 39.81 2.01
2495 2823 7.546667 CACCAAAGTAGCTACGAATAGGTTAAA 59.453 37.037 17.99 0.00 39.81 1.52
2496 2824 7.547019 ACCAAAGTAGCTACGAATAGGTTAAAC 59.453 37.037 17.99 0.00 39.81 2.01
2497 2825 7.763071 CCAAAGTAGCTACGAATAGGTTAAACT 59.237 37.037 17.99 0.00 39.81 2.66
2498 2826 8.805688 CAAAGTAGCTACGAATAGGTTAAACTC 58.194 37.037 17.99 0.00 39.81 3.01
2499 2827 6.723282 AGTAGCTACGAATAGGTTAAACTCG 58.277 40.000 17.99 0.00 39.81 4.18
2500 2828 5.824904 AGCTACGAATAGGTTAAACTCGA 57.175 39.130 7.55 0.00 35.56 4.04
2501 2829 6.388435 AGCTACGAATAGGTTAAACTCGAT 57.612 37.500 7.55 0.00 35.56 3.59
2502 2830 7.502120 AGCTACGAATAGGTTAAACTCGATA 57.498 36.000 7.55 0.00 35.56 2.92
2503 2831 7.583230 AGCTACGAATAGGTTAAACTCGATAG 58.417 38.462 7.55 6.72 35.56 2.08
2504 2832 6.305160 GCTACGAATAGGTTAAACTCGATAGC 59.695 42.308 7.55 11.39 34.88 2.97
2505 2833 6.388435 ACGAATAGGTTAAACTCGATAGCT 57.612 37.500 7.55 0.00 33.81 3.32
2506 2834 6.207213 ACGAATAGGTTAAACTCGATAGCTG 58.793 40.000 7.55 0.00 33.81 4.24
2507 2835 6.039047 ACGAATAGGTTAAACTCGATAGCTGA 59.961 38.462 7.55 0.00 33.81 4.26
2508 2836 6.360148 CGAATAGGTTAAACTCGATAGCTGAC 59.640 42.308 0.00 0.00 0.00 3.51
2509 2837 4.388378 AGGTTAAACTCGATAGCTGACC 57.612 45.455 0.00 0.00 0.00 4.02
2510 2838 3.767673 AGGTTAAACTCGATAGCTGACCA 59.232 43.478 0.00 0.00 0.00 4.02
2511 2839 4.406003 AGGTTAAACTCGATAGCTGACCAT 59.594 41.667 0.00 0.00 0.00 3.55
2512 2840 4.508124 GGTTAAACTCGATAGCTGACCATG 59.492 45.833 0.00 0.00 0.00 3.66
2513 2841 3.895232 AAACTCGATAGCTGACCATGT 57.105 42.857 0.00 0.00 0.00 3.21
2514 2842 3.895232 AACTCGATAGCTGACCATGTT 57.105 42.857 0.00 0.00 0.00 2.71
2515 2843 3.170791 ACTCGATAGCTGACCATGTTG 57.829 47.619 0.00 0.00 0.00 3.33
2516 2844 2.497675 ACTCGATAGCTGACCATGTTGT 59.502 45.455 0.00 0.00 0.00 3.32
2517 2845 3.119291 CTCGATAGCTGACCATGTTGTC 58.881 50.000 0.00 0.00 35.77 3.18
2518 2846 2.159099 TCGATAGCTGACCATGTTGTCC 60.159 50.000 0.00 0.00 34.25 4.02
2519 2847 2.205074 GATAGCTGACCATGTTGTCCG 58.795 52.381 0.00 0.00 34.25 4.79
2520 2848 0.249120 TAGCTGACCATGTTGTCCGG 59.751 55.000 0.00 0.00 34.25 5.14
2521 2849 2.690778 GCTGACCATGTTGTCCGGC 61.691 63.158 0.00 0.00 34.25 6.13
2522 2850 2.033448 TGACCATGTTGTCCGGCC 59.967 61.111 0.00 0.00 34.25 6.13
2523 2851 2.033448 GACCATGTTGTCCGGCCA 59.967 61.111 2.24 0.00 0.00 5.36
2524 2852 1.378514 GACCATGTTGTCCGGCCAT 60.379 57.895 2.24 0.00 0.00 4.40
2525 2853 1.376609 GACCATGTTGTCCGGCCATC 61.377 60.000 2.24 0.00 0.00 3.51
2526 2854 1.077501 CCATGTTGTCCGGCCATCT 60.078 57.895 2.24 0.00 0.00 2.90
2527 2855 1.097547 CCATGTTGTCCGGCCATCTC 61.098 60.000 2.24 0.00 0.00 2.75
2528 2856 0.392863 CATGTTGTCCGGCCATCTCA 60.393 55.000 2.24 0.00 0.00 3.27
2529 2857 0.327924 ATGTTGTCCGGCCATCTCAA 59.672 50.000 2.24 0.00 0.00 3.02
2530 2858 0.109532 TGTTGTCCGGCCATCTCAAA 59.890 50.000 2.24 0.00 0.00 2.69
2531 2859 0.521735 GTTGTCCGGCCATCTCAAAC 59.478 55.000 2.24 0.00 0.00 2.93
2532 2860 0.109532 TTGTCCGGCCATCTCAAACA 59.890 50.000 2.24 0.00 0.00 2.83
2533 2861 0.109532 TGTCCGGCCATCTCAAACAA 59.890 50.000 2.24 0.00 0.00 2.83
2534 2862 0.521735 GTCCGGCCATCTCAAACAAC 59.478 55.000 2.24 0.00 0.00 3.32
2535 2863 0.953471 TCCGGCCATCTCAAACAACG 60.953 55.000 2.24 0.00 0.00 4.10
2536 2864 1.234615 CCGGCCATCTCAAACAACGT 61.235 55.000 2.24 0.00 0.00 3.99
2537 2865 0.591170 CGGCCATCTCAAACAACGTT 59.409 50.000 2.24 0.00 0.00 3.99
2538 2866 1.399727 CGGCCATCTCAAACAACGTTC 60.400 52.381 2.24 0.00 0.00 3.95
2539 2867 1.606668 GGCCATCTCAAACAACGTTCA 59.393 47.619 0.00 0.00 0.00 3.18
2540 2868 2.228822 GGCCATCTCAAACAACGTTCAT 59.771 45.455 0.00 0.00 0.00 2.57
2541 2869 3.236816 GCCATCTCAAACAACGTTCATG 58.763 45.455 0.00 0.00 0.00 3.07
2542 2870 3.236816 CCATCTCAAACAACGTTCATGC 58.763 45.455 0.00 0.00 0.00 4.06
2543 2871 3.304592 CCATCTCAAACAACGTTCATGCA 60.305 43.478 0.00 0.00 0.00 3.96
2544 2872 4.289342 CATCTCAAACAACGTTCATGCAA 58.711 39.130 0.00 0.00 0.00 4.08
2545 2873 3.951306 TCTCAAACAACGTTCATGCAAG 58.049 40.909 0.00 0.00 0.00 4.01
2546 2874 3.044986 CTCAAACAACGTTCATGCAAGG 58.955 45.455 0.00 0.00 0.00 3.61
2547 2875 2.685388 TCAAACAACGTTCATGCAAGGA 59.315 40.909 0.00 0.00 0.00 3.36
2548 2876 3.129462 TCAAACAACGTTCATGCAAGGAA 59.871 39.130 0.00 0.00 32.22 3.36
2549 2877 3.354089 AACAACGTTCATGCAAGGAAG 57.646 42.857 0.00 0.00 37.27 3.46
2550 2878 1.608590 ACAACGTTCATGCAAGGAAGG 59.391 47.619 17.45 17.45 46.56 3.46
2551 2879 1.879380 CAACGTTCATGCAAGGAAGGA 59.121 47.619 22.86 0.65 44.28 3.36
2552 2880 2.270352 ACGTTCATGCAAGGAAGGAA 57.730 45.000 22.86 5.91 44.28 3.36
2553 2881 2.795329 ACGTTCATGCAAGGAAGGAAT 58.205 42.857 22.86 6.41 44.28 3.01
2554 2882 3.950397 ACGTTCATGCAAGGAAGGAATA 58.050 40.909 22.86 0.00 44.28 1.75
2555 2883 4.526970 ACGTTCATGCAAGGAAGGAATAT 58.473 39.130 22.86 5.60 44.28 1.28
2556 2884 5.680619 ACGTTCATGCAAGGAAGGAATATA 58.319 37.500 22.86 0.00 44.28 0.86
2557 2885 5.527582 ACGTTCATGCAAGGAAGGAATATAC 59.472 40.000 22.86 4.34 44.28 1.47
2558 2886 5.760253 CGTTCATGCAAGGAAGGAATATACT 59.240 40.000 15.19 0.00 44.28 2.12
2559 2887 6.073548 CGTTCATGCAAGGAAGGAATATACTC 60.074 42.308 15.19 0.00 44.28 2.59
2560 2888 5.541845 TCATGCAAGGAAGGAATATACTCG 58.458 41.667 0.00 0.00 0.00 4.18
2561 2889 5.304357 TCATGCAAGGAAGGAATATACTCGA 59.696 40.000 0.00 0.00 0.00 4.04
2562 2890 5.808366 TGCAAGGAAGGAATATACTCGAT 57.192 39.130 0.00 0.00 0.00 3.59
2563 2891 5.541845 TGCAAGGAAGGAATATACTCGATG 58.458 41.667 0.00 0.00 0.00 3.84
2564 2892 4.932200 GCAAGGAAGGAATATACTCGATGG 59.068 45.833 0.00 0.00 0.00 3.51
2565 2893 4.810191 AGGAAGGAATATACTCGATGGC 57.190 45.455 0.00 0.00 0.00 4.40
2566 2894 3.193691 AGGAAGGAATATACTCGATGGCG 59.806 47.826 0.00 0.00 39.35 5.69
2567 2895 3.056749 GGAAGGAATATACTCGATGGCGT 60.057 47.826 0.00 0.00 38.98 5.68
2568 2896 4.157289 GGAAGGAATATACTCGATGGCGTA 59.843 45.833 0.00 0.00 38.98 4.42
2569 2897 4.966965 AGGAATATACTCGATGGCGTAG 57.033 45.455 0.00 0.00 38.98 3.51
2570 2898 4.333690 AGGAATATACTCGATGGCGTAGT 58.666 43.478 0.00 0.00 38.98 2.73
2571 2899 5.494724 AGGAATATACTCGATGGCGTAGTA 58.505 41.667 0.00 0.00 38.98 1.82
2572 2900 5.942236 AGGAATATACTCGATGGCGTAGTAA 59.058 40.000 0.00 0.00 35.45 2.24
2573 2901 6.602406 AGGAATATACTCGATGGCGTAGTAAT 59.398 38.462 0.00 0.00 35.45 1.89
2574 2902 6.911511 GGAATATACTCGATGGCGTAGTAATC 59.088 42.308 0.00 0.00 35.45 1.75
2575 2903 4.698583 ATACTCGATGGCGTAGTAATCC 57.301 45.455 0.00 0.00 35.45 3.01
2576 2904 2.584236 ACTCGATGGCGTAGTAATCCT 58.416 47.619 0.00 0.00 38.98 3.24
2577 2905 2.293677 ACTCGATGGCGTAGTAATCCTG 59.706 50.000 0.00 0.00 38.98 3.86
2578 2906 1.000607 TCGATGGCGTAGTAATCCTGC 60.001 52.381 0.00 0.00 38.98 4.85
2579 2907 1.269569 CGATGGCGTAGTAATCCTGCA 60.270 52.381 0.00 0.00 0.00 4.41
2580 2908 2.610479 CGATGGCGTAGTAATCCTGCAT 60.610 50.000 0.00 0.00 0.00 3.96
2581 2909 2.238942 TGGCGTAGTAATCCTGCATG 57.761 50.000 0.00 0.00 0.00 4.06
2582 2910 1.760029 TGGCGTAGTAATCCTGCATGA 59.240 47.619 0.00 0.00 0.00 3.07
2583 2911 2.224042 TGGCGTAGTAATCCTGCATGAG 60.224 50.000 0.00 0.00 0.00 2.90
2584 2912 2.035961 GGCGTAGTAATCCTGCATGAGA 59.964 50.000 0.00 0.00 0.00 3.27
2585 2913 3.053455 GCGTAGTAATCCTGCATGAGAC 58.947 50.000 0.00 0.00 0.00 3.36
2586 2914 3.643763 CGTAGTAATCCTGCATGAGACC 58.356 50.000 0.00 0.00 0.00 3.85
2587 2915 2.898729 AGTAATCCTGCATGAGACCG 57.101 50.000 0.00 0.00 0.00 4.79
2588 2916 2.111384 AGTAATCCTGCATGAGACCGT 58.889 47.619 0.00 0.00 0.00 4.83
2589 2917 2.501723 AGTAATCCTGCATGAGACCGTT 59.498 45.455 0.00 0.00 0.00 4.44
2590 2918 2.029838 AATCCTGCATGAGACCGTTC 57.970 50.000 0.00 0.00 0.00 3.95
2591 2919 0.904649 ATCCTGCATGAGACCGTTCA 59.095 50.000 0.00 0.00 0.00 3.18
2592 2920 0.037326 TCCTGCATGAGACCGTTCAC 60.037 55.000 0.00 0.00 0.00 3.18
2593 2921 1.354337 CCTGCATGAGACCGTTCACG 61.354 60.000 0.00 0.00 39.44 4.35
2594 2922 0.388520 CTGCATGAGACCGTTCACGA 60.389 55.000 0.00 0.00 43.02 4.35
2595 2923 0.388520 TGCATGAGACCGTTCACGAG 60.389 55.000 0.00 0.00 43.02 4.18
2596 2924 0.109272 GCATGAGACCGTTCACGAGA 60.109 55.000 0.00 0.00 43.02 4.04
2597 2925 1.469940 GCATGAGACCGTTCACGAGAT 60.470 52.381 0.00 0.00 43.02 2.75
2598 2926 2.188524 CATGAGACCGTTCACGAGATG 58.811 52.381 0.00 0.00 43.02 2.90
2599 2927 0.109272 TGAGACCGTTCACGAGATGC 60.109 55.000 0.00 0.00 43.02 3.91
2600 2928 0.109272 GAGACCGTTCACGAGATGCA 60.109 55.000 0.00 0.00 43.02 3.96
2601 2929 0.388649 AGACCGTTCACGAGATGCAC 60.389 55.000 0.00 0.00 43.02 4.57
2602 2930 1.352156 GACCGTTCACGAGATGCACC 61.352 60.000 0.00 0.00 43.02 5.01
2603 2931 2.444624 CCGTTCACGAGATGCACCG 61.445 63.158 0.00 0.00 43.02 4.94
2604 2932 1.443702 CGTTCACGAGATGCACCGA 60.444 57.895 11.22 0.00 43.02 4.69
2605 2933 1.006825 CGTTCACGAGATGCACCGAA 61.007 55.000 11.22 0.00 43.02 4.30
2606 2934 1.144969 GTTCACGAGATGCACCGAAA 58.855 50.000 11.22 3.66 0.00 3.46
2607 2935 1.529438 GTTCACGAGATGCACCGAAAA 59.471 47.619 11.22 3.38 0.00 2.29
2608 2936 1.872388 TCACGAGATGCACCGAAAAA 58.128 45.000 11.22 0.00 0.00 1.94
2630 2958 8.918202 AAAAACATGAGTGGAGTAGTATTCAA 57.082 30.769 0.00 0.00 0.00 2.69
2631 2959 8.918202 AAAACATGAGTGGAGTAGTATTCAAA 57.082 30.769 0.00 0.00 0.00 2.69
2632 2960 8.918202 AAACATGAGTGGAGTAGTATTCAAAA 57.082 30.769 0.00 0.00 0.00 2.44
2633 2961 9.520515 AAACATGAGTGGAGTAGTATTCAAAAT 57.479 29.630 0.00 0.00 0.00 1.82
2634 2962 9.520515 AACATGAGTGGAGTAGTATTCAAAATT 57.479 29.630 0.00 0.00 0.00 1.82
2635 2963 8.950210 ACATGAGTGGAGTAGTATTCAAAATTG 58.050 33.333 0.00 0.00 0.00 2.32
2636 2964 9.166173 CATGAGTGGAGTAGTATTCAAAATTGA 57.834 33.333 0.00 0.00 34.92 2.57
2637 2965 8.547967 TGAGTGGAGTAGTATTCAAAATTGAC 57.452 34.615 0.00 0.00 36.83 3.18
2638 2966 8.375506 TGAGTGGAGTAGTATTCAAAATTGACT 58.624 33.333 0.00 0.00 36.83 3.41
2639 2967 9.220767 GAGTGGAGTAGTATTCAAAATTGACTT 57.779 33.333 0.00 0.00 36.83 3.01
2640 2968 9.574516 AGTGGAGTAGTATTCAAAATTGACTTT 57.425 29.630 0.00 0.00 36.83 2.66
2641 2969 9.612620 GTGGAGTAGTATTCAAAATTGACTTTG 57.387 33.333 0.00 0.00 36.83 2.77
2642 2970 9.567776 TGGAGTAGTATTCAAAATTGACTTTGA 57.432 29.630 0.00 0.00 42.21 2.69
2650 2978 7.862512 TTCAAAATTGACTTTGAAAATGCCT 57.137 28.000 8.61 0.00 46.90 4.75
2651 2979 8.954950 TTCAAAATTGACTTTGAAAATGCCTA 57.045 26.923 8.61 0.00 46.90 3.93
2652 2980 9.558396 TTCAAAATTGACTTTGAAAATGCCTAT 57.442 25.926 8.61 0.00 46.90 2.57
2653 2981 8.991026 TCAAAATTGACTTTGAAAATGCCTATG 58.009 29.630 0.00 0.00 41.25 2.23
2654 2982 8.991026 CAAAATTGACTTTGAAAATGCCTATGA 58.009 29.630 0.00 0.00 38.35 2.15
2655 2983 9.729281 AAAATTGACTTTGAAAATGCCTATGAT 57.271 25.926 0.00 0.00 0.00 2.45
2659 2987 7.999679 TGACTTTGAAAATGCCTATGATAAGG 58.000 34.615 0.00 0.00 39.87 2.69
2660 2988 7.615365 TGACTTTGAAAATGCCTATGATAAGGT 59.385 33.333 0.00 0.00 39.02 3.50
2661 2989 8.366359 ACTTTGAAAATGCCTATGATAAGGTT 57.634 30.769 0.00 0.00 39.02 3.50
2662 2990 9.474313 ACTTTGAAAATGCCTATGATAAGGTTA 57.526 29.630 0.00 0.00 39.02 2.85
2667 2995 9.696917 GAAAATGCCTATGATAAGGTTAAATGG 57.303 33.333 0.00 0.00 39.02 3.16
2668 2996 8.782137 AAATGCCTATGATAAGGTTAAATGGT 57.218 30.769 0.00 0.00 39.02 3.55
2669 2997 8.409358 AATGCCTATGATAAGGTTAAATGGTC 57.591 34.615 0.00 0.00 39.02 4.02
2670 2998 7.149202 TGCCTATGATAAGGTTAAATGGTCT 57.851 36.000 0.00 0.00 39.02 3.85
2671 2999 7.582719 TGCCTATGATAAGGTTAAATGGTCTT 58.417 34.615 0.00 0.00 39.02 3.01
2672 3000 8.058847 TGCCTATGATAAGGTTAAATGGTCTTT 58.941 33.333 0.00 0.00 39.02 2.52
2673 3001 8.568794 GCCTATGATAAGGTTAAATGGTCTTTC 58.431 37.037 0.00 0.00 39.02 2.62
2674 3002 9.067986 CCTATGATAAGGTTAAATGGTCTTTCC 57.932 37.037 0.00 0.00 31.46 3.13
2675 3003 9.853177 CTATGATAAGGTTAAATGGTCTTTCCT 57.147 33.333 0.00 0.00 37.07 3.36
2677 3005 8.575649 TGATAAGGTTAAATGGTCTTTCCTTC 57.424 34.615 0.00 0.00 35.75 3.46
2678 3006 8.167392 TGATAAGGTTAAATGGTCTTTCCTTCA 58.833 33.333 0.00 0.00 35.75 3.02
2679 3007 8.950007 ATAAGGTTAAATGGTCTTTCCTTCAA 57.050 30.769 0.00 0.00 35.75 2.69
2680 3008 7.855784 AAGGTTAAATGGTCTTTCCTTCAAT 57.144 32.000 0.00 0.00 37.07 2.57
2681 3009 8.950007 AAGGTTAAATGGTCTTTCCTTCAATA 57.050 30.769 0.00 0.00 37.07 1.90
2682 3010 8.581253 AGGTTAAATGGTCTTTCCTTCAATAG 57.419 34.615 0.00 0.00 37.07 1.73
2683 3011 7.615757 AGGTTAAATGGTCTTTCCTTCAATAGG 59.384 37.037 0.00 0.00 46.27 2.57
2684 3012 5.921962 AAATGGTCTTTCCTTCAATAGGC 57.078 39.130 0.00 0.00 44.37 3.93
2685 3013 3.366052 TGGTCTTTCCTTCAATAGGCC 57.634 47.619 0.00 0.00 44.37 5.19
2686 3014 2.919602 TGGTCTTTCCTTCAATAGGCCT 59.080 45.455 11.78 11.78 44.37 5.19
2687 3015 3.333680 TGGTCTTTCCTTCAATAGGCCTT 59.666 43.478 12.58 0.00 44.37 4.35
2688 3016 4.538490 TGGTCTTTCCTTCAATAGGCCTTA 59.462 41.667 12.58 0.00 44.37 2.69
2689 3017 5.014755 TGGTCTTTCCTTCAATAGGCCTTAA 59.985 40.000 12.58 0.00 44.37 1.85
2690 3018 5.590663 GGTCTTTCCTTCAATAGGCCTTAAG 59.409 44.000 12.58 10.12 44.37 1.85
2691 3019 5.590663 GTCTTTCCTTCAATAGGCCTTAAGG 59.409 44.000 12.58 17.81 44.37 2.69
2692 3020 5.491078 TCTTTCCTTCAATAGGCCTTAAGGA 59.509 40.000 26.21 24.07 44.37 3.36
2693 3021 5.994416 TTCCTTCAATAGGCCTTAAGGAT 57.006 39.130 26.47 14.69 43.84 3.24
2694 3022 5.310409 TCCTTCAATAGGCCTTAAGGATG 57.690 43.478 26.21 14.02 44.37 3.51
2695 3023 4.975147 TCCTTCAATAGGCCTTAAGGATGA 59.025 41.667 26.21 15.91 44.37 2.92
2696 3024 5.431731 TCCTTCAATAGGCCTTAAGGATGAA 59.568 40.000 26.21 20.94 44.37 2.57
2697 3025 6.069088 TCCTTCAATAGGCCTTAAGGATGAAA 60.069 38.462 26.21 9.36 44.37 2.69
2698 3026 6.264067 CCTTCAATAGGCCTTAAGGATGAAAG 59.736 42.308 26.21 15.79 39.26 2.62
2699 3027 5.694995 TCAATAGGCCTTAAGGATGAAAGG 58.305 41.667 26.21 8.20 44.32 3.11
2700 3028 5.193728 TCAATAGGCCTTAAGGATGAAAGGT 59.806 40.000 26.21 2.11 43.55 3.50
2701 3029 5.734031 ATAGGCCTTAAGGATGAAAGGTT 57.266 39.130 26.21 1.69 43.55 3.50
2702 3030 4.404185 AGGCCTTAAGGATGAAAGGTTT 57.596 40.909 26.21 0.00 43.55 3.27
2703 3031 4.344978 AGGCCTTAAGGATGAAAGGTTTC 58.655 43.478 26.21 2.28 43.55 2.78
2704 3032 4.044698 AGGCCTTAAGGATGAAAGGTTTCT 59.955 41.667 26.21 1.79 43.55 2.52
2705 3033 4.399618 GGCCTTAAGGATGAAAGGTTTCTC 59.600 45.833 26.21 1.62 43.55 2.87
2706 3034 4.399618 GCCTTAAGGATGAAAGGTTTCTCC 59.600 45.833 26.21 7.98 43.55 3.71
2707 3035 4.636206 CCTTAAGGATGAAAGGTTTCTCCG 59.364 45.833 17.21 0.00 38.44 4.63
2708 3036 5.488341 CTTAAGGATGAAAGGTTTCTCCGA 58.512 41.667 4.19 1.31 41.99 4.55
2709 3037 4.576330 AAGGATGAAAGGTTTCTCCGAT 57.424 40.909 4.19 2.06 41.99 4.18
2710 3038 5.693769 AAGGATGAAAGGTTTCTCCGATA 57.306 39.130 4.19 0.00 41.99 2.92
2711 3039 5.693769 AGGATGAAAGGTTTCTCCGATAA 57.306 39.130 4.19 0.00 41.99 1.75
2712 3040 6.062258 AGGATGAAAGGTTTCTCCGATAAA 57.938 37.500 4.19 0.00 41.99 1.40
2713 3041 6.663734 AGGATGAAAGGTTTCTCCGATAAAT 58.336 36.000 4.19 0.00 41.99 1.40
2714 3042 6.543831 AGGATGAAAGGTTTCTCCGATAAATG 59.456 38.462 4.19 0.00 41.99 2.32
2715 3043 6.238759 GGATGAAAGGTTTCTCCGATAAATGG 60.239 42.308 4.19 0.00 41.99 3.16
2716 3044 4.398044 TGAAAGGTTTCTCCGATAAATGGC 59.602 41.667 4.19 0.00 41.99 4.40
2717 3045 3.644966 AGGTTTCTCCGATAAATGGCA 57.355 42.857 0.00 0.00 41.99 4.92
2718 3046 4.170468 AGGTTTCTCCGATAAATGGCAT 57.830 40.909 0.00 0.00 41.99 4.40
2719 3047 4.137543 AGGTTTCTCCGATAAATGGCATC 58.862 43.478 0.00 0.00 41.99 3.91
2720 3048 3.882888 GGTTTCTCCGATAAATGGCATCA 59.117 43.478 0.00 0.00 0.00 3.07
2721 3049 4.338118 GGTTTCTCCGATAAATGGCATCAA 59.662 41.667 0.00 0.00 0.00 2.57
2722 3050 5.010012 GGTTTCTCCGATAAATGGCATCAAT 59.990 40.000 0.00 0.00 0.00 2.57
2723 3051 5.694231 TTCTCCGATAAATGGCATCAATG 57.306 39.130 0.00 0.00 0.00 2.82
2724 3052 4.074259 TCTCCGATAAATGGCATCAATGG 58.926 43.478 0.00 0.00 0.00 3.16
2725 3053 4.074259 CTCCGATAAATGGCATCAATGGA 58.926 43.478 0.00 4.44 0.00 3.41
2726 3054 4.665451 TCCGATAAATGGCATCAATGGAT 58.335 39.130 0.00 0.00 0.00 3.41
2727 3055 4.701651 TCCGATAAATGGCATCAATGGATC 59.298 41.667 0.00 0.00 0.00 3.36
2728 3056 4.142315 CCGATAAATGGCATCAATGGATCC 60.142 45.833 4.20 4.20 0.00 3.36
2729 3057 4.460034 CGATAAATGGCATCAATGGATCCA 59.540 41.667 18.88 18.88 36.12 3.41
2730 3058 5.126545 CGATAAATGGCATCAATGGATCCAT 59.873 40.000 22.15 22.15 40.28 3.41
2731 3059 6.319405 CGATAAATGGCATCAATGGATCCATA 59.681 38.462 27.54 13.70 38.94 2.74
2732 3060 7.148035 CGATAAATGGCATCAATGGATCCATAA 60.148 37.037 27.54 18.52 38.94 1.90
2733 3061 6.945636 AAATGGCATCAATGGATCCATAAT 57.054 33.333 27.54 19.86 38.94 1.28
2734 3062 6.945636 AATGGCATCAATGGATCCATAATT 57.054 33.333 27.54 10.56 38.94 1.40
2735 3063 6.945636 ATGGCATCAATGGATCCATAATTT 57.054 33.333 27.54 10.17 38.52 1.82
2736 3064 6.750660 TGGCATCAATGGATCCATAATTTT 57.249 33.333 27.54 9.76 35.31 1.82
2737 3065 6.526526 TGGCATCAATGGATCCATAATTTTG 58.473 36.000 27.54 21.01 35.31 2.44
2738 3066 6.099990 TGGCATCAATGGATCCATAATTTTGT 59.900 34.615 27.54 7.36 35.31 2.83
2739 3067 7.289549 TGGCATCAATGGATCCATAATTTTGTA 59.710 33.333 27.54 12.20 35.31 2.41
2740 3068 8.149647 GGCATCAATGGATCCATAATTTTGTAA 58.850 33.333 27.54 8.09 35.31 2.41
2741 3069 8.981647 GCATCAATGGATCCATAATTTTGTAAC 58.018 33.333 27.54 11.51 35.31 2.50
2744 3072 8.694540 TCAATGGATCCATAATTTTGTAACTGG 58.305 33.333 27.54 0.00 35.31 4.00
2745 3073 8.694540 CAATGGATCCATAATTTTGTAACTGGA 58.305 33.333 27.54 0.00 37.21 3.86
2746 3074 7.880160 TGGATCCATAATTTTGTAACTGGAG 57.120 36.000 11.44 0.00 36.31 3.86
2747 3075 6.833416 TGGATCCATAATTTTGTAACTGGAGG 59.167 38.462 11.44 0.00 36.31 4.30
2748 3076 6.833933 GGATCCATAATTTTGTAACTGGAGGT 59.166 38.462 6.95 0.00 36.31 3.85
2749 3077 7.996644 GGATCCATAATTTTGTAACTGGAGGTA 59.003 37.037 6.95 0.00 36.31 3.08
2750 3078 8.980481 ATCCATAATTTTGTAACTGGAGGTAG 57.020 34.615 0.00 0.00 36.31 3.18
2751 3079 6.826741 TCCATAATTTTGTAACTGGAGGTAGC 59.173 38.462 0.00 0.00 0.00 3.58
2752 3080 6.238374 CCATAATTTTGTAACTGGAGGTAGCG 60.238 42.308 0.00 0.00 0.00 4.26
2753 3081 3.756933 TTTTGTAACTGGAGGTAGCGT 57.243 42.857 0.00 0.00 0.00 5.07
2754 3082 2.736144 TTGTAACTGGAGGTAGCGTG 57.264 50.000 0.00 0.00 0.00 5.34
2755 3083 0.245539 TGTAACTGGAGGTAGCGTGC 59.754 55.000 0.00 0.00 0.00 5.34
2756 3084 0.459759 GTAACTGGAGGTAGCGTGCC 60.460 60.000 0.00 0.00 0.00 5.01
2757 3085 0.901114 TAACTGGAGGTAGCGTGCCA 60.901 55.000 4.57 4.57 0.00 4.92
2758 3086 1.553690 AACTGGAGGTAGCGTGCCAT 61.554 55.000 5.00 0.00 0.00 4.40
2759 3087 1.227380 CTGGAGGTAGCGTGCCATC 60.227 63.158 5.00 0.00 0.00 3.51
2760 3088 1.960040 CTGGAGGTAGCGTGCCATCA 61.960 60.000 5.00 0.00 0.00 3.07
2761 3089 1.220749 GGAGGTAGCGTGCCATCAA 59.779 57.895 0.00 0.00 0.00 2.57
2762 3090 0.392461 GGAGGTAGCGTGCCATCAAA 60.392 55.000 0.00 0.00 0.00 2.69
2763 3091 1.009829 GAGGTAGCGTGCCATCAAAG 58.990 55.000 0.00 0.00 0.00 2.77
2764 3092 0.324943 AGGTAGCGTGCCATCAAAGT 59.675 50.000 0.00 0.00 0.00 2.66
2765 3093 0.727398 GGTAGCGTGCCATCAAAGTC 59.273 55.000 0.00 0.00 0.00 3.01
2766 3094 1.438651 GTAGCGTGCCATCAAAGTCA 58.561 50.000 0.00 0.00 0.00 3.41
2767 3095 1.804151 GTAGCGTGCCATCAAAGTCAA 59.196 47.619 0.00 0.00 0.00 3.18
2768 3096 1.538047 AGCGTGCCATCAAAGTCAAT 58.462 45.000 0.00 0.00 0.00 2.57
2769 3097 1.200716 AGCGTGCCATCAAAGTCAATG 59.799 47.619 0.00 0.00 0.00 2.82
2770 3098 1.199789 GCGTGCCATCAAAGTCAATGA 59.800 47.619 0.00 0.00 0.00 2.57
2771 3099 2.159338 GCGTGCCATCAAAGTCAATGAT 60.159 45.455 0.00 0.00 38.02 2.45
2780 3108 6.630444 ATCAAAGTCAATGATGATGTAGGC 57.370 37.500 0.00 0.00 38.01 3.93
2781 3109 4.883585 TCAAAGTCAATGATGATGTAGGCC 59.116 41.667 0.00 0.00 38.01 5.19
2782 3110 4.508551 AAGTCAATGATGATGTAGGCCA 57.491 40.909 5.01 0.00 38.01 5.36
2783 3111 4.719026 AGTCAATGATGATGTAGGCCAT 57.281 40.909 5.01 0.00 38.01 4.40
2784 3112 5.057843 AGTCAATGATGATGTAGGCCATT 57.942 39.130 5.01 0.00 38.01 3.16
2785 3113 6.191657 AGTCAATGATGATGTAGGCCATTA 57.808 37.500 5.01 0.00 38.01 1.90
2786 3114 6.000219 AGTCAATGATGATGTAGGCCATTAC 59.000 40.000 5.01 0.00 38.01 1.89
2787 3115 6.000219 GTCAATGATGATGTAGGCCATTACT 59.000 40.000 5.01 0.00 38.01 2.24
2788 3116 6.488006 GTCAATGATGATGTAGGCCATTACTT 59.512 38.462 5.01 0.00 38.01 2.24
2789 3117 7.013655 GTCAATGATGATGTAGGCCATTACTTT 59.986 37.037 5.01 0.00 38.01 2.66
2790 3118 7.229306 TCAATGATGATGTAGGCCATTACTTTC 59.771 37.037 5.01 2.45 32.56 2.62
2791 3119 6.000246 TGATGATGTAGGCCATTACTTTCA 58.000 37.500 5.01 8.00 32.56 2.69
2792 3120 6.057533 TGATGATGTAGGCCATTACTTTCAG 58.942 40.000 5.01 0.00 32.56 3.02
2793 3121 5.692115 TGATGTAGGCCATTACTTTCAGA 57.308 39.130 5.01 0.00 32.56 3.27
2794 3122 5.428253 TGATGTAGGCCATTACTTTCAGAC 58.572 41.667 5.01 0.00 32.56 3.51
2795 3123 4.901197 TGTAGGCCATTACTTTCAGACA 57.099 40.909 5.01 0.00 0.00 3.41
2796 3124 5.235850 TGTAGGCCATTACTTTCAGACAA 57.764 39.130 5.01 0.00 0.00 3.18
2797 3125 5.626142 TGTAGGCCATTACTTTCAGACAAA 58.374 37.500 5.01 0.00 0.00 2.83
2798 3126 6.065374 TGTAGGCCATTACTTTCAGACAAAA 58.935 36.000 5.01 0.00 0.00 2.44
2799 3127 6.547880 TGTAGGCCATTACTTTCAGACAAAAA 59.452 34.615 5.01 0.00 0.00 1.94
2815 3143 3.800826 AAAAAGACTGCGACAGGGT 57.199 47.368 10.80 0.00 35.51 4.34
2816 3144 1.308998 AAAAAGACTGCGACAGGGTG 58.691 50.000 10.80 0.00 35.51 4.61
2817 3145 0.468226 AAAAGACTGCGACAGGGTGA 59.532 50.000 10.80 0.00 35.51 4.02
2818 3146 0.249911 AAAGACTGCGACAGGGTGAC 60.250 55.000 10.80 0.00 35.51 3.67
2819 3147 1.115930 AAGACTGCGACAGGGTGACT 61.116 55.000 10.80 1.46 35.51 3.41
2820 3148 1.080434 GACTGCGACAGGGTGACTC 60.080 63.158 10.80 0.00 35.51 3.36
2821 3149 2.262915 CTGCGACAGGGTGACTCC 59.737 66.667 0.00 0.00 0.00 3.85
2822 3150 2.523168 TGCGACAGGGTGACTCCA 60.523 61.111 0.00 0.00 38.11 3.86
2823 3151 1.892819 CTGCGACAGGGTGACTCCAT 61.893 60.000 0.00 0.00 38.11 3.41
2828 3156 2.689073 CAGGGTGACTCCATGTCCT 58.311 57.895 0.05 0.00 44.75 3.85
2829 3157 0.539051 CAGGGTGACTCCATGTCCTC 59.461 60.000 0.05 0.00 44.75 3.71
2830 3158 0.117140 AGGGTGACTCCATGTCCTCA 59.883 55.000 0.00 0.00 44.75 3.86
2831 3159 0.984230 GGGTGACTCCATGTCCTCAA 59.016 55.000 0.00 0.00 44.75 3.02
2832 3160 1.561542 GGGTGACTCCATGTCCTCAAT 59.438 52.381 0.00 0.00 44.75 2.57
2833 3161 2.636830 GGTGACTCCATGTCCTCAATG 58.363 52.381 0.00 0.00 44.75 2.82
2834 3162 2.026822 GGTGACTCCATGTCCTCAATGT 60.027 50.000 0.00 0.00 44.75 2.71
2835 3163 3.560025 GGTGACTCCATGTCCTCAATGTT 60.560 47.826 0.00 0.00 44.75 2.71
2836 3164 4.323485 GGTGACTCCATGTCCTCAATGTTA 60.323 45.833 0.00 0.00 44.75 2.41
2837 3165 5.431765 GTGACTCCATGTCCTCAATGTTAT 58.568 41.667 0.00 0.00 44.75 1.89
2838 3166 5.882557 GTGACTCCATGTCCTCAATGTTATT 59.117 40.000 0.00 0.00 44.75 1.40
2839 3167 6.375455 GTGACTCCATGTCCTCAATGTTATTT 59.625 38.462 0.00 0.00 44.75 1.40
2840 3168 7.552687 GTGACTCCATGTCCTCAATGTTATTTA 59.447 37.037 0.00 0.00 44.75 1.40
2841 3169 8.106462 TGACTCCATGTCCTCAATGTTATTTAA 58.894 33.333 0.00 0.00 44.75 1.52
2842 3170 8.281212 ACTCCATGTCCTCAATGTTATTTAAC 57.719 34.615 0.00 0.00 36.74 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 62 2.418976 GCACGAAAAATACCCTCTCACC 59.581 50.000 0.00 0.00 0.00 4.02
61 63 2.093783 CGCACGAAAAATACCCTCTCAC 59.906 50.000 0.00 0.00 0.00 3.51
70 72 5.538067 TCATGATGAACGCACGAAAAATA 57.462 34.783 0.00 0.00 0.00 1.40
86 88 1.759445 CCGGTCTCCTCACTTCATGAT 59.241 52.381 0.00 0.00 36.48 2.45
95 97 1.075970 CCTCATCCCGGTCTCCTCA 60.076 63.158 0.00 0.00 0.00 3.86
131 134 3.016736 GTTGGATTAAGCAGCCTAGCAA 58.983 45.455 0.00 0.00 36.85 3.91
145 148 0.965363 GTCCCATGTGGCGTTGGATT 60.965 55.000 2.10 0.00 34.81 3.01
153 156 1.376609 GATTGGTCGTCCCATGTGGC 61.377 60.000 0.00 0.00 44.74 5.01
158 161 1.133792 GGATTGGATTGGTCGTCCCAT 60.134 52.381 0.00 0.00 44.74 4.00
165 168 2.025887 AGGTCACTGGATTGGATTGGTC 60.026 50.000 0.00 0.00 0.00 4.02
262 265 8.001292 CCCTCCTACCATATTGAAAGAAGAATT 58.999 37.037 0.00 0.00 0.00 2.17
268 271 4.044308 TGCCCTCCTACCATATTGAAAGA 58.956 43.478 0.00 0.00 0.00 2.52
308 311 2.086869 CCACCTGTTCATGTCCATCAC 58.913 52.381 0.00 0.00 0.00 3.06
465 472 3.650070 TGATCACTTGCTATAGCCTCG 57.350 47.619 21.84 12.04 41.18 4.63
490 497 8.337532 GCATATTAGCATTTTGAACCAAAATCC 58.662 33.333 12.98 6.38 46.82 3.01
507 516 4.553547 CGCTTTTCCTGACTGCATATTAGC 60.554 45.833 0.00 0.00 0.00 3.09
540 553 4.491676 TCTGTTACTTATGAAGTCGTGCC 58.508 43.478 0.00 0.00 41.77 5.01
575 588 6.264832 CAACATCTGCTCTGTTGTGTAAAAA 58.735 36.000 14.50 0.00 45.31 1.94
576 589 5.820131 CAACATCTGCTCTGTTGTGTAAAA 58.180 37.500 14.50 0.00 45.31 1.52
577 590 5.422666 CAACATCTGCTCTGTTGTGTAAA 57.577 39.130 14.50 0.00 45.31 2.01
584 597 1.072806 TGCCTCAACATCTGCTCTGTT 59.927 47.619 0.00 0.00 37.31 3.16
585 598 0.689055 TGCCTCAACATCTGCTCTGT 59.311 50.000 0.00 0.00 0.00 3.41
586 599 1.338864 ACTGCCTCAACATCTGCTCTG 60.339 52.381 0.00 0.00 0.00 3.35
587 600 0.982704 ACTGCCTCAACATCTGCTCT 59.017 50.000 0.00 0.00 0.00 4.09
588 601 1.736681 GAACTGCCTCAACATCTGCTC 59.263 52.381 0.00 0.00 0.00 4.26
609 622 5.874895 ATGTGCGATGAATAATCATGGAG 57.125 39.130 6.95 0.00 46.30 3.86
619 632 2.353889 GCTCTCACAATGTGCGATGAAT 59.646 45.455 8.78 0.00 32.98 2.57
620 633 1.733912 GCTCTCACAATGTGCGATGAA 59.266 47.619 8.78 0.00 32.98 2.57
622 635 1.062148 CAGCTCTCACAATGTGCGATG 59.938 52.381 8.78 4.92 32.98 3.84
623 636 1.366679 CAGCTCTCACAATGTGCGAT 58.633 50.000 8.78 0.00 32.98 4.58
624 637 0.671472 CCAGCTCTCACAATGTGCGA 60.671 55.000 8.78 7.23 32.98 5.10
625 638 1.792301 CCAGCTCTCACAATGTGCG 59.208 57.895 8.78 2.17 32.98 5.34
626 639 0.959372 AGCCAGCTCTCACAATGTGC 60.959 55.000 8.78 0.00 32.98 4.57
627 640 2.277969 CTAGCCAGCTCTCACAATGTG 58.722 52.381 7.12 7.12 34.45 3.21
645 658 0.606401 GGTTTGCCTCTGCTGCACTA 60.606 55.000 0.00 0.00 38.72 2.74
693 706 0.813184 CCAACTGCTCGGAAATGCAT 59.187 50.000 0.00 0.00 38.59 3.96
702 715 0.951040 GAGTGGTTCCCAACTGCTCG 60.951 60.000 0.00 0.00 34.18 5.03
713 726 2.435059 GCCGAGCTGGAGTGGTTC 60.435 66.667 0.00 0.00 42.00 3.62
724 737 3.842925 TTTGTGGGAGTGGCCGAGC 62.843 63.158 0.00 0.00 37.63 5.03
747 760 1.037493 GAGGGTTGTGGTTTGGGTTC 58.963 55.000 0.00 0.00 0.00 3.62
776 789 5.808366 TCATAGAGTGGAGAAGTTTGTGT 57.192 39.130 0.00 0.00 0.00 3.72
794 807 6.146347 CGAATGAGTGAGAGACGACTATCATA 59.854 42.308 14.82 6.13 44.39 2.15
800 813 1.131504 GCGAATGAGTGAGAGACGACT 59.868 52.381 0.00 0.00 0.00 4.18
802 815 1.135660 GTGCGAATGAGTGAGAGACGA 60.136 52.381 0.00 0.00 0.00 4.20
803 816 1.263776 GTGCGAATGAGTGAGAGACG 58.736 55.000 0.00 0.00 0.00 4.18
804 817 1.067565 TGGTGCGAATGAGTGAGAGAC 60.068 52.381 0.00 0.00 0.00 3.36
805 818 1.256812 TGGTGCGAATGAGTGAGAGA 58.743 50.000 0.00 0.00 0.00 3.10
806 819 2.306341 ATGGTGCGAATGAGTGAGAG 57.694 50.000 0.00 0.00 0.00 3.20
807 820 2.159099 GGTATGGTGCGAATGAGTGAGA 60.159 50.000 0.00 0.00 0.00 3.27
819 834 1.680338 GGATGAGTTGGGTATGGTGC 58.320 55.000 0.00 0.00 0.00 5.01
841 856 4.437587 GGATGCCCTGCTGCCTGT 62.438 66.667 0.00 0.00 0.00 4.00
853 868 4.013050 GGATTTTATAGAGGCAGGGATGC 58.987 47.826 0.00 0.00 0.00 3.91
855 870 3.307762 GCGGATTTTATAGAGGCAGGGAT 60.308 47.826 0.00 0.00 0.00 3.85
858 873 2.427506 GGCGGATTTTATAGAGGCAGG 58.572 52.381 0.00 0.00 0.00 4.85
918 933 6.325993 TCTTGATGGGGTTTATGAGATGAA 57.674 37.500 0.00 0.00 0.00 2.57
1353 1395 4.033129 TCGCCATTAACTTAATTCGAACGG 59.967 41.667 0.00 0.00 31.81 4.44
1462 1504 3.437795 ACGACGACGGCGGAGAAT 61.438 61.111 28.89 1.90 44.46 2.40
1492 1534 2.508586 GAAGCCTCAGGACGGTGGTC 62.509 65.000 0.00 0.00 42.66 4.02
1922 1969 1.470098 GAAACTGAGGATGCACGCAAT 59.530 47.619 0.00 0.00 0.00 3.56
1927 1974 3.190118 CAGAAAGGAAACTGAGGATGCAC 59.810 47.826 0.00 0.00 42.68 4.57
2112 2160 5.659440 AAATCCATAAACATTGTTCCGCT 57.341 34.783 1.83 0.00 0.00 5.52
2149 2197 3.406512 AAGACCTAGCCACACCTATCT 57.593 47.619 0.00 0.00 0.00 1.98
2169 2217 2.469274 AACTGAGTCTCGGTCGACTA 57.531 50.000 16.46 3.17 43.91 2.59
2177 2225 2.724977 TGCCACTTAACTGAGTCTCG 57.275 50.000 0.00 0.00 0.00 4.04
2194 2242 9.243105 ACAACCAATTATCCCTGTATATTATGC 57.757 33.333 0.00 0.00 0.00 3.14
2246 2294 8.226112 TGTTTTCAGAAATTAGGGGTAAACCTA 58.774 33.333 0.00 0.00 42.09 3.08
2260 2308 4.783764 GGGGACGATTGTTTTCAGAAAT 57.216 40.909 0.00 0.00 0.00 2.17
2278 2326 2.037871 CAAAGTGGTTTGGACGGGG 58.962 57.895 0.00 0.00 39.63 5.73
2324 2372 8.410141 TGAAGTTTTCTAAATTGACGGTCAAAT 58.590 29.630 25.64 16.09 40.12 2.32
2449 2777 6.347696 TGGTGAAAATTTTGAAGCTGACATT 58.652 32.000 8.47 0.00 0.00 2.71
2450 2778 5.916318 TGGTGAAAATTTTGAAGCTGACAT 58.084 33.333 8.47 0.00 0.00 3.06
2451 2779 5.336150 TGGTGAAAATTTTGAAGCTGACA 57.664 34.783 8.47 0.00 0.00 3.58
2452 2780 6.313658 ACTTTGGTGAAAATTTTGAAGCTGAC 59.686 34.615 8.47 0.00 0.00 3.51
2453 2781 6.405538 ACTTTGGTGAAAATTTTGAAGCTGA 58.594 32.000 8.47 0.00 0.00 4.26
2454 2782 6.667007 ACTTTGGTGAAAATTTTGAAGCTG 57.333 33.333 8.47 4.33 0.00 4.24
2455 2783 6.479990 GCTACTTTGGTGAAAATTTTGAAGCT 59.520 34.615 8.47 0.00 0.00 3.74
2456 2784 6.479990 AGCTACTTTGGTGAAAATTTTGAAGC 59.520 34.615 8.47 4.13 0.00 3.86
2457 2785 8.968242 GTAGCTACTTTGGTGAAAATTTTGAAG 58.032 33.333 16.88 7.00 0.00 3.02
2458 2786 7.646130 CGTAGCTACTTTGGTGAAAATTTTGAA 59.354 33.333 21.20 0.00 0.00 2.69
2459 2787 7.012515 TCGTAGCTACTTTGGTGAAAATTTTGA 59.987 33.333 21.20 0.00 0.00 2.69
2460 2788 7.136119 TCGTAGCTACTTTGGTGAAAATTTTG 58.864 34.615 21.20 0.22 0.00 2.44
2461 2789 7.266922 TCGTAGCTACTTTGGTGAAAATTTT 57.733 32.000 21.20 2.28 0.00 1.82
2462 2790 6.870971 TCGTAGCTACTTTGGTGAAAATTT 57.129 33.333 21.20 0.00 0.00 1.82
2463 2791 6.870971 TTCGTAGCTACTTTGGTGAAAATT 57.129 33.333 21.20 0.00 0.00 1.82
2464 2792 7.280205 CCTATTCGTAGCTACTTTGGTGAAAAT 59.720 37.037 21.20 5.56 0.00 1.82
2465 2793 6.592607 CCTATTCGTAGCTACTTTGGTGAAAA 59.407 38.462 21.20 3.01 0.00 2.29
2466 2794 6.103997 CCTATTCGTAGCTACTTTGGTGAAA 58.896 40.000 21.20 6.88 0.00 2.69
2467 2795 5.186409 ACCTATTCGTAGCTACTTTGGTGAA 59.814 40.000 21.20 15.37 0.00 3.18
2468 2796 4.708421 ACCTATTCGTAGCTACTTTGGTGA 59.292 41.667 21.20 7.49 0.00 4.02
2469 2797 5.007385 ACCTATTCGTAGCTACTTTGGTG 57.993 43.478 21.20 8.64 0.00 4.17
2470 2798 5.672421 AACCTATTCGTAGCTACTTTGGT 57.328 39.130 21.20 17.06 0.00 3.67
2471 2799 7.763071 AGTTTAACCTATTCGTAGCTACTTTGG 59.237 37.037 21.20 16.52 0.00 3.28
2472 2800 8.699283 AGTTTAACCTATTCGTAGCTACTTTG 57.301 34.615 21.20 6.62 0.00 2.77
2473 2801 7.699812 CGAGTTTAACCTATTCGTAGCTACTTT 59.300 37.037 21.20 8.52 0.00 2.66
2474 2802 7.066284 TCGAGTTTAACCTATTCGTAGCTACTT 59.934 37.037 21.20 9.51 33.35 2.24
2475 2803 6.540189 TCGAGTTTAACCTATTCGTAGCTACT 59.460 38.462 21.20 5.86 33.35 2.57
2476 2804 6.719365 TCGAGTTTAACCTATTCGTAGCTAC 58.281 40.000 14.19 14.19 33.35 3.58
2477 2805 6.925610 TCGAGTTTAACCTATTCGTAGCTA 57.074 37.500 4.81 0.00 33.35 3.32
2478 2806 5.824904 TCGAGTTTAACCTATTCGTAGCT 57.175 39.130 0.00 0.00 33.35 3.32
2479 2807 6.305160 GCTATCGAGTTTAACCTATTCGTAGC 59.695 42.308 15.25 15.25 35.73 3.58
2480 2808 7.534578 CAGCTATCGAGTTTAACCTATTCGTAG 59.465 40.741 4.81 6.89 33.35 3.51
2481 2809 7.227314 TCAGCTATCGAGTTTAACCTATTCGTA 59.773 37.037 4.81 0.00 33.35 3.43
2482 2810 6.039047 TCAGCTATCGAGTTTAACCTATTCGT 59.961 38.462 4.81 0.00 33.35 3.85
2483 2811 6.360148 GTCAGCTATCGAGTTTAACCTATTCG 59.640 42.308 0.00 0.00 0.00 3.34
2484 2812 6.641723 GGTCAGCTATCGAGTTTAACCTATTC 59.358 42.308 0.00 0.00 0.00 1.75
2485 2813 6.097839 TGGTCAGCTATCGAGTTTAACCTATT 59.902 38.462 0.00 0.00 0.00 1.73
2486 2814 5.597182 TGGTCAGCTATCGAGTTTAACCTAT 59.403 40.000 0.00 0.00 0.00 2.57
2487 2815 4.951715 TGGTCAGCTATCGAGTTTAACCTA 59.048 41.667 0.00 0.00 0.00 3.08
2488 2816 3.767673 TGGTCAGCTATCGAGTTTAACCT 59.232 43.478 0.00 0.00 0.00 3.50
2489 2817 4.119442 TGGTCAGCTATCGAGTTTAACC 57.881 45.455 0.00 0.00 0.00 2.85
2490 2818 5.109903 ACATGGTCAGCTATCGAGTTTAAC 58.890 41.667 0.00 0.00 0.00 2.01
2491 2819 5.339008 ACATGGTCAGCTATCGAGTTTAA 57.661 39.130 0.00 0.00 0.00 1.52
2492 2820 5.109210 CAACATGGTCAGCTATCGAGTTTA 58.891 41.667 0.00 0.00 0.00 2.01
2493 2821 3.895232 ACATGGTCAGCTATCGAGTTT 57.105 42.857 0.00 0.00 0.00 2.66
2494 2822 3.055819 ACAACATGGTCAGCTATCGAGTT 60.056 43.478 0.00 0.00 0.00 3.01
2495 2823 2.497675 ACAACATGGTCAGCTATCGAGT 59.502 45.455 0.00 0.00 0.00 4.18
2496 2824 3.119291 GACAACATGGTCAGCTATCGAG 58.881 50.000 0.00 0.00 37.73 4.04
2497 2825 2.159099 GGACAACATGGTCAGCTATCGA 60.159 50.000 0.00 0.00 39.59 3.59
2498 2826 2.205074 GGACAACATGGTCAGCTATCG 58.795 52.381 0.00 0.00 39.59 2.92
2499 2827 2.205074 CGGACAACATGGTCAGCTATC 58.795 52.381 0.00 0.00 39.59 2.08
2500 2828 1.134401 CCGGACAACATGGTCAGCTAT 60.134 52.381 0.00 0.00 39.59 2.97
2501 2829 0.249120 CCGGACAACATGGTCAGCTA 59.751 55.000 0.00 0.00 39.59 3.32
2502 2830 1.003355 CCGGACAACATGGTCAGCT 60.003 57.895 0.00 0.00 39.59 4.24
2503 2831 2.690778 GCCGGACAACATGGTCAGC 61.691 63.158 5.05 0.00 39.59 4.26
2504 2832 2.040544 GGCCGGACAACATGGTCAG 61.041 63.158 5.05 0.00 39.59 3.51
2505 2833 2.033448 GGCCGGACAACATGGTCA 59.967 61.111 5.05 0.00 39.59 4.02
2506 2834 1.376609 GATGGCCGGACAACATGGTC 61.377 60.000 17.77 0.91 37.06 4.02
2507 2835 1.378514 GATGGCCGGACAACATGGT 60.379 57.895 17.77 0.00 0.00 3.55
2508 2836 1.077501 AGATGGCCGGACAACATGG 60.078 57.895 17.77 0.00 0.00 3.66
2509 2837 0.392863 TGAGATGGCCGGACAACATG 60.393 55.000 17.77 0.00 0.00 3.21
2510 2838 0.327924 TTGAGATGGCCGGACAACAT 59.672 50.000 17.77 7.69 0.00 2.71
2511 2839 0.109532 TTTGAGATGGCCGGACAACA 59.890 50.000 17.77 13.11 0.00 3.33
2512 2840 0.521735 GTTTGAGATGGCCGGACAAC 59.478 55.000 17.77 13.56 0.00 3.32
2513 2841 0.109532 TGTTTGAGATGGCCGGACAA 59.890 50.000 17.77 0.00 0.00 3.18
2514 2842 0.109532 TTGTTTGAGATGGCCGGACA 59.890 50.000 15.46 15.46 0.00 4.02
2515 2843 0.521735 GTTGTTTGAGATGGCCGGAC 59.478 55.000 5.05 0.56 0.00 4.79
2516 2844 0.953471 CGTTGTTTGAGATGGCCGGA 60.953 55.000 5.05 0.00 0.00 5.14
2517 2845 1.234615 ACGTTGTTTGAGATGGCCGG 61.235 55.000 0.00 0.00 0.00 6.13
2518 2846 0.591170 AACGTTGTTTGAGATGGCCG 59.409 50.000 0.00 0.00 0.00 6.13
2519 2847 1.606668 TGAACGTTGTTTGAGATGGCC 59.393 47.619 5.00 0.00 0.00 5.36
2520 2848 3.236816 CATGAACGTTGTTTGAGATGGC 58.763 45.455 5.00 0.00 0.00 4.40
2521 2849 3.236816 GCATGAACGTTGTTTGAGATGG 58.763 45.455 5.00 0.00 0.00 3.51
2522 2850 3.887741 TGCATGAACGTTGTTTGAGATG 58.112 40.909 5.00 0.00 0.00 2.90
2523 2851 4.539870 CTTGCATGAACGTTGTTTGAGAT 58.460 39.130 5.00 0.00 0.00 2.75
2524 2852 3.243035 CCTTGCATGAACGTTGTTTGAGA 60.243 43.478 5.00 0.00 0.00 3.27
2525 2853 3.044986 CCTTGCATGAACGTTGTTTGAG 58.955 45.455 5.00 0.00 0.00 3.02
2526 2854 2.685388 TCCTTGCATGAACGTTGTTTGA 59.315 40.909 5.00 0.00 0.00 2.69
2527 2855 3.077229 TCCTTGCATGAACGTTGTTTG 57.923 42.857 5.00 1.08 0.00 2.93
2528 2856 3.490761 CCTTCCTTGCATGAACGTTGTTT 60.491 43.478 5.00 0.00 0.00 2.83
2529 2857 2.034558 CCTTCCTTGCATGAACGTTGTT 59.965 45.455 5.00 0.00 0.00 2.83
2530 2858 1.608590 CCTTCCTTGCATGAACGTTGT 59.391 47.619 5.00 0.00 0.00 3.32
2531 2859 1.879380 TCCTTCCTTGCATGAACGTTG 59.121 47.619 5.00 0.00 0.00 4.10
2532 2860 2.270352 TCCTTCCTTGCATGAACGTT 57.730 45.000 0.00 0.00 0.00 3.99
2533 2861 2.270352 TTCCTTCCTTGCATGAACGT 57.730 45.000 0.00 0.00 0.00 3.99
2534 2862 5.760253 AGTATATTCCTTCCTTGCATGAACG 59.240 40.000 0.00 0.00 0.00 3.95
2535 2863 6.073548 CGAGTATATTCCTTCCTTGCATGAAC 60.074 42.308 0.00 0.00 0.00 3.18
2536 2864 5.991606 CGAGTATATTCCTTCCTTGCATGAA 59.008 40.000 0.00 0.08 0.00 2.57
2537 2865 5.304357 TCGAGTATATTCCTTCCTTGCATGA 59.696 40.000 0.00 0.00 0.00 3.07
2538 2866 5.541845 TCGAGTATATTCCTTCCTTGCATG 58.458 41.667 0.00 0.00 0.00 4.06
2539 2867 5.808366 TCGAGTATATTCCTTCCTTGCAT 57.192 39.130 0.00 0.00 0.00 3.96
2540 2868 5.511373 CCATCGAGTATATTCCTTCCTTGCA 60.511 44.000 0.00 0.00 0.00 4.08
2541 2869 4.932200 CCATCGAGTATATTCCTTCCTTGC 59.068 45.833 0.00 0.00 0.00 4.01
2542 2870 4.932200 GCCATCGAGTATATTCCTTCCTTG 59.068 45.833 0.00 0.00 0.00 3.61
2543 2871 4.322049 CGCCATCGAGTATATTCCTTCCTT 60.322 45.833 0.00 0.00 38.10 3.36
2544 2872 3.193691 CGCCATCGAGTATATTCCTTCCT 59.806 47.826 0.00 0.00 38.10 3.36
2545 2873 3.056749 ACGCCATCGAGTATATTCCTTCC 60.057 47.826 0.00 0.00 39.41 3.46
2546 2874 4.175787 ACGCCATCGAGTATATTCCTTC 57.824 45.455 0.00 0.00 39.41 3.46
2547 2875 4.765856 ACTACGCCATCGAGTATATTCCTT 59.234 41.667 0.00 0.00 39.41 3.36
2548 2876 4.333690 ACTACGCCATCGAGTATATTCCT 58.666 43.478 0.00 0.00 39.41 3.36
2549 2877 4.698583 ACTACGCCATCGAGTATATTCC 57.301 45.455 0.00 0.00 39.41 3.01
2550 2878 6.911511 GGATTACTACGCCATCGAGTATATTC 59.088 42.308 0.00 0.00 39.41 1.75
2551 2879 6.602406 AGGATTACTACGCCATCGAGTATATT 59.398 38.462 0.00 0.00 39.41 1.28
2552 2880 6.038382 CAGGATTACTACGCCATCGAGTATAT 59.962 42.308 0.00 0.00 39.41 0.86
2553 2881 5.353400 CAGGATTACTACGCCATCGAGTATA 59.647 44.000 0.00 0.00 39.41 1.47
2554 2882 4.156190 CAGGATTACTACGCCATCGAGTAT 59.844 45.833 0.00 0.00 39.41 2.12
2555 2883 3.501062 CAGGATTACTACGCCATCGAGTA 59.499 47.826 0.00 0.00 39.41 2.59
2556 2884 2.293677 CAGGATTACTACGCCATCGAGT 59.706 50.000 0.00 0.00 39.41 4.18
2557 2885 2.922758 GCAGGATTACTACGCCATCGAG 60.923 54.545 0.00 0.00 39.41 4.04
2558 2886 1.000607 GCAGGATTACTACGCCATCGA 60.001 52.381 0.00 0.00 39.41 3.59
2559 2887 1.269569 TGCAGGATTACTACGCCATCG 60.270 52.381 0.00 0.00 42.43 3.84
2560 2888 2.526304 TGCAGGATTACTACGCCATC 57.474 50.000 0.00 0.00 0.00 3.51
2561 2889 2.368548 TCATGCAGGATTACTACGCCAT 59.631 45.455 0.00 0.00 0.00 4.40
2562 2890 1.760029 TCATGCAGGATTACTACGCCA 59.240 47.619 0.00 0.00 0.00 5.69
2563 2891 2.035961 TCTCATGCAGGATTACTACGCC 59.964 50.000 0.00 0.00 0.00 5.68
2564 2892 3.053455 GTCTCATGCAGGATTACTACGC 58.947 50.000 0.00 0.00 0.00 4.42
2565 2893 3.643763 GGTCTCATGCAGGATTACTACG 58.356 50.000 0.00 0.00 0.00 3.51
2566 2894 3.068307 ACGGTCTCATGCAGGATTACTAC 59.932 47.826 0.00 0.00 0.00 2.73
2567 2895 3.296854 ACGGTCTCATGCAGGATTACTA 58.703 45.455 0.00 0.00 0.00 1.82
2568 2896 2.111384 ACGGTCTCATGCAGGATTACT 58.889 47.619 0.00 0.00 0.00 2.24
2569 2897 2.604046 ACGGTCTCATGCAGGATTAC 57.396 50.000 0.00 3.37 0.00 1.89
2570 2898 2.499693 TGAACGGTCTCATGCAGGATTA 59.500 45.455 0.00 0.00 0.00 1.75
2571 2899 1.278985 TGAACGGTCTCATGCAGGATT 59.721 47.619 0.00 0.00 0.00 3.01
2572 2900 0.904649 TGAACGGTCTCATGCAGGAT 59.095 50.000 0.00 0.00 0.00 3.24
2573 2901 0.037326 GTGAACGGTCTCATGCAGGA 60.037 55.000 0.33 0.00 0.00 3.86
2574 2902 1.354337 CGTGAACGGTCTCATGCAGG 61.354 60.000 0.33 0.00 35.37 4.85
2575 2903 0.388520 TCGTGAACGGTCTCATGCAG 60.389 55.000 0.33 0.00 40.29 4.41
2576 2904 0.388520 CTCGTGAACGGTCTCATGCA 60.389 55.000 0.33 0.00 40.29 3.96
2577 2905 0.109272 TCTCGTGAACGGTCTCATGC 60.109 55.000 0.33 0.00 40.29 4.06
2578 2906 2.188524 CATCTCGTGAACGGTCTCATG 58.811 52.381 0.33 0.00 40.29 3.07
2579 2907 1.469940 GCATCTCGTGAACGGTCTCAT 60.470 52.381 0.33 0.00 40.29 2.90
2580 2908 0.109272 GCATCTCGTGAACGGTCTCA 60.109 55.000 0.33 0.00 40.29 3.27
2581 2909 0.109272 TGCATCTCGTGAACGGTCTC 60.109 55.000 0.33 0.00 40.29 3.36
2582 2910 0.388649 GTGCATCTCGTGAACGGTCT 60.389 55.000 0.33 0.00 40.29 3.85
2583 2911 1.352156 GGTGCATCTCGTGAACGGTC 61.352 60.000 2.59 0.00 37.23 4.79
2584 2912 1.374252 GGTGCATCTCGTGAACGGT 60.374 57.895 2.59 0.00 37.23 4.83
2585 2913 2.444624 CGGTGCATCTCGTGAACGG 61.445 63.158 2.59 0.00 37.23 4.44
2586 2914 1.006825 TTCGGTGCATCTCGTGAACG 61.007 55.000 0.00 0.00 37.23 3.95
2587 2915 1.144969 TTTCGGTGCATCTCGTGAAC 58.855 50.000 0.00 0.00 35.43 3.18
2588 2916 1.872388 TTTTCGGTGCATCTCGTGAA 58.128 45.000 0.00 0.00 0.00 3.18
2589 2917 1.872388 TTTTTCGGTGCATCTCGTGA 58.128 45.000 0.00 0.00 0.00 4.35
2605 2933 8.918202 TTGAATACTACTCCACTCATGTTTTT 57.082 30.769 0.00 0.00 0.00 1.94
2606 2934 8.918202 TTTGAATACTACTCCACTCATGTTTT 57.082 30.769 0.00 0.00 0.00 2.43
2607 2935 8.918202 TTTTGAATACTACTCCACTCATGTTT 57.082 30.769 0.00 0.00 0.00 2.83
2608 2936 9.520515 AATTTTGAATACTACTCCACTCATGTT 57.479 29.630 0.00 0.00 0.00 2.71
2609 2937 8.950210 CAATTTTGAATACTACTCCACTCATGT 58.050 33.333 0.00 0.00 0.00 3.21
2610 2938 9.166173 TCAATTTTGAATACTACTCCACTCATG 57.834 33.333 0.00 0.00 33.55 3.07
2611 2939 9.167311 GTCAATTTTGAATACTACTCCACTCAT 57.833 33.333 0.00 0.00 39.21 2.90
2612 2940 8.375506 AGTCAATTTTGAATACTACTCCACTCA 58.624 33.333 0.00 0.00 39.21 3.41
2613 2941 8.779354 AGTCAATTTTGAATACTACTCCACTC 57.221 34.615 0.00 0.00 39.21 3.51
2614 2942 9.574516 AAAGTCAATTTTGAATACTACTCCACT 57.425 29.630 0.00 0.00 39.21 4.00
2615 2943 9.612620 CAAAGTCAATTTTGAATACTACTCCAC 57.387 33.333 0.00 0.00 39.79 4.02
2616 2944 9.567776 TCAAAGTCAATTTTGAATACTACTCCA 57.432 29.630 0.00 0.00 42.39 3.86
2627 2955 8.991026 CATAGGCATTTTCAAAGTCAATTTTGA 58.009 29.630 0.00 0.00 43.32 2.69
2628 2956 8.991026 TCATAGGCATTTTCAAAGTCAATTTTG 58.009 29.630 0.00 0.00 38.97 2.44
2629 2957 9.729281 ATCATAGGCATTTTCAAAGTCAATTTT 57.271 25.926 0.00 0.00 0.00 1.82
2633 2961 8.469200 CCTTATCATAGGCATTTTCAAAGTCAA 58.531 33.333 0.00 0.00 0.00 3.18
2634 2962 7.615365 ACCTTATCATAGGCATTTTCAAAGTCA 59.385 33.333 0.00 0.00 38.99 3.41
2635 2963 8.000780 ACCTTATCATAGGCATTTTCAAAGTC 57.999 34.615 0.00 0.00 38.99 3.01
2636 2964 7.961326 ACCTTATCATAGGCATTTTCAAAGT 57.039 32.000 0.00 0.00 38.99 2.66
2641 2969 9.696917 CCATTTAACCTTATCATAGGCATTTTC 57.303 33.333 0.00 0.00 38.99 2.29
2642 2970 9.212593 ACCATTTAACCTTATCATAGGCATTTT 57.787 29.630 0.00 0.00 38.99 1.82
2643 2971 8.782137 ACCATTTAACCTTATCATAGGCATTT 57.218 30.769 0.00 0.00 38.99 2.32
2644 2972 8.227507 AGACCATTTAACCTTATCATAGGCATT 58.772 33.333 0.00 0.00 38.99 3.56
2645 2973 7.759607 AGACCATTTAACCTTATCATAGGCAT 58.240 34.615 0.00 0.00 38.99 4.40
2646 2974 7.149202 AGACCATTTAACCTTATCATAGGCA 57.851 36.000 0.00 0.00 38.99 4.75
2647 2975 8.465273 AAAGACCATTTAACCTTATCATAGGC 57.535 34.615 0.00 0.00 38.99 3.93
2648 2976 9.067986 GGAAAGACCATTTAACCTTATCATAGG 57.932 37.037 0.00 0.00 38.76 2.57
2649 2977 9.853177 AGGAAAGACCATTTAACCTTATCATAG 57.147 33.333 0.00 0.00 42.04 2.23
2651 2979 9.190317 GAAGGAAAGACCATTTAACCTTATCAT 57.810 33.333 0.00 0.00 42.04 2.45
2652 2980 8.167392 TGAAGGAAAGACCATTTAACCTTATCA 58.833 33.333 0.00 0.00 42.04 2.15
2653 2981 8.575649 TGAAGGAAAGACCATTTAACCTTATC 57.424 34.615 0.00 0.00 42.04 1.75
2654 2982 8.950007 TTGAAGGAAAGACCATTTAACCTTAT 57.050 30.769 0.00 0.00 42.04 1.73
2655 2983 8.950007 ATTGAAGGAAAGACCATTTAACCTTA 57.050 30.769 0.00 0.00 42.04 2.69
2656 2984 7.855784 ATTGAAGGAAAGACCATTTAACCTT 57.144 32.000 0.00 0.00 42.04 3.50
2657 2985 8.581253 CTATTGAAGGAAAGACCATTTAACCT 57.419 34.615 0.00 0.00 42.04 3.50
2674 3002 6.264067 CCTTTCATCCTTAAGGCCTATTGAAG 59.736 42.308 17.32 7.67 34.96 3.02
2675 3003 6.129179 CCTTTCATCCTTAAGGCCTATTGAA 58.871 40.000 17.32 15.40 34.96 2.69
2676 3004 5.193728 ACCTTTCATCCTTAAGGCCTATTGA 59.806 40.000 17.32 10.85 43.84 2.57
2677 3005 5.449553 ACCTTTCATCCTTAAGGCCTATTG 58.550 41.667 17.32 8.84 43.84 1.90
2678 3006 5.734031 ACCTTTCATCCTTAAGGCCTATT 57.266 39.130 17.32 0.00 43.84 1.73
2679 3007 5.734031 AACCTTTCATCCTTAAGGCCTAT 57.266 39.130 17.32 2.31 43.84 2.57
2680 3008 5.253096 AGAAACCTTTCATCCTTAAGGCCTA 59.747 40.000 17.32 0.00 43.84 3.93
2681 3009 4.044698 AGAAACCTTTCATCCTTAAGGCCT 59.955 41.667 17.32 0.00 43.84 5.19
2682 3010 4.344978 AGAAACCTTTCATCCTTAAGGCC 58.655 43.478 17.32 0.00 43.84 5.19
2683 3011 4.399618 GGAGAAACCTTTCATCCTTAAGGC 59.600 45.833 17.32 0.00 43.84 4.35
2684 3012 4.636206 CGGAGAAACCTTTCATCCTTAAGG 59.364 45.833 15.98 15.98 45.19 2.69
2685 3013 5.488341 TCGGAGAAACCTTTCATCCTTAAG 58.512 41.667 0.00 0.00 39.61 1.85
2686 3014 5.492855 TCGGAGAAACCTTTCATCCTTAA 57.507 39.130 0.78 0.00 39.61 1.85
2687 3015 5.693769 ATCGGAGAAACCTTTCATCCTTA 57.306 39.130 0.78 0.00 43.58 2.69
2688 3016 4.576330 ATCGGAGAAACCTTTCATCCTT 57.424 40.909 0.78 0.00 43.58 3.36
2689 3017 5.693769 TTATCGGAGAAACCTTTCATCCT 57.306 39.130 0.78 0.00 43.58 3.24
2690 3018 6.238759 CCATTTATCGGAGAAACCTTTCATCC 60.239 42.308 0.00 4.13 43.58 3.51
2691 3019 6.729187 CCATTTATCGGAGAAACCTTTCATC 58.271 40.000 0.00 0.00 43.58 2.92
2692 3020 5.067805 GCCATTTATCGGAGAAACCTTTCAT 59.932 40.000 0.00 0.00 43.58 2.57
2693 3021 4.398044 GCCATTTATCGGAGAAACCTTTCA 59.602 41.667 0.00 0.00 43.58 2.69
2694 3022 4.398044 TGCCATTTATCGGAGAAACCTTTC 59.602 41.667 0.00 0.00 43.58 2.62
2695 3023 4.340617 TGCCATTTATCGGAGAAACCTTT 58.659 39.130 0.00 0.00 43.58 3.11
2696 3024 3.963129 TGCCATTTATCGGAGAAACCTT 58.037 40.909 0.00 0.00 43.58 3.50
2697 3025 3.644966 TGCCATTTATCGGAGAAACCT 57.355 42.857 0.00 0.00 43.58 3.50
2698 3026 3.882888 TGATGCCATTTATCGGAGAAACC 59.117 43.478 0.00 0.00 43.58 3.27
2699 3027 5.499139 TTGATGCCATTTATCGGAGAAAC 57.501 39.130 0.00 0.00 43.58 2.78
2700 3028 5.009911 CCATTGATGCCATTTATCGGAGAAA 59.990 40.000 0.00 0.00 43.58 2.52
2701 3029 4.520111 CCATTGATGCCATTTATCGGAGAA 59.480 41.667 0.00 0.00 43.58 2.87
2702 3030 4.074259 CCATTGATGCCATTTATCGGAGA 58.926 43.478 0.00 0.00 45.75 3.71
2703 3031 4.074259 TCCATTGATGCCATTTATCGGAG 58.926 43.478 0.00 0.00 0.00 4.63
2704 3032 4.097551 TCCATTGATGCCATTTATCGGA 57.902 40.909 0.00 0.00 0.00 4.55
2705 3033 4.142315 GGATCCATTGATGCCATTTATCGG 60.142 45.833 6.95 0.00 33.52 4.18
2706 3034 4.460034 TGGATCCATTGATGCCATTTATCG 59.540 41.667 11.44 0.00 38.47 2.92
2707 3035 5.988310 TGGATCCATTGATGCCATTTATC 57.012 39.130 11.44 0.00 38.47 1.75
2708 3036 8.618240 ATTATGGATCCATTGATGCCATTTAT 57.382 30.769 31.70 6.25 38.47 1.40
2709 3037 8.438618 AATTATGGATCCATTGATGCCATTTA 57.561 30.769 31.70 6.94 38.47 1.40
2710 3038 6.945636 ATTATGGATCCATTGATGCCATTT 57.054 33.333 31.70 6.93 38.47 2.32
2711 3039 6.945636 AATTATGGATCCATTGATGCCATT 57.054 33.333 31.70 14.84 38.47 3.16
2712 3040 6.945636 AAATTATGGATCCATTGATGCCAT 57.054 33.333 31.70 8.26 38.47 4.40
2713 3041 6.099990 ACAAAATTATGGATCCATTGATGCCA 59.900 34.615 31.70 9.82 38.47 4.92
2714 3042 6.527423 ACAAAATTATGGATCCATTGATGCC 58.473 36.000 31.70 0.00 38.47 4.40
2715 3043 8.981647 GTTACAAAATTATGGATCCATTGATGC 58.018 33.333 31.70 14.44 39.59 3.91
2718 3046 8.694540 CCAGTTACAAAATTATGGATCCATTGA 58.305 33.333 31.70 20.58 37.82 2.57
2719 3047 8.694540 TCCAGTTACAAAATTATGGATCCATTG 58.305 33.333 31.70 24.58 37.82 2.82
2720 3048 8.837099 TCCAGTTACAAAATTATGGATCCATT 57.163 30.769 31.70 12.97 37.82 3.16
2721 3049 7.506938 CCTCCAGTTACAAAATTATGGATCCAT 59.493 37.037 29.66 29.66 36.31 3.41
2722 3050 6.833416 CCTCCAGTTACAAAATTATGGATCCA 59.167 38.462 18.88 18.88 36.31 3.41
2723 3051 6.833933 ACCTCCAGTTACAAAATTATGGATCC 59.166 38.462 4.20 4.20 36.31 3.36
2724 3052 7.881775 ACCTCCAGTTACAAAATTATGGATC 57.118 36.000 0.00 0.00 36.31 3.36
2725 3053 7.502561 GCTACCTCCAGTTACAAAATTATGGAT 59.497 37.037 0.00 0.00 36.31 3.41
2726 3054 6.826741 GCTACCTCCAGTTACAAAATTATGGA 59.173 38.462 0.00 0.00 35.60 3.41
2727 3055 6.238374 CGCTACCTCCAGTTACAAAATTATGG 60.238 42.308 0.00 0.00 0.00 2.74
2728 3056 6.315393 ACGCTACCTCCAGTTACAAAATTATG 59.685 38.462 0.00 0.00 0.00 1.90
2729 3057 6.315393 CACGCTACCTCCAGTTACAAAATTAT 59.685 38.462 0.00 0.00 0.00 1.28
2730 3058 5.640357 CACGCTACCTCCAGTTACAAAATTA 59.360 40.000 0.00 0.00 0.00 1.40
2731 3059 4.454504 CACGCTACCTCCAGTTACAAAATT 59.545 41.667 0.00 0.00 0.00 1.82
2732 3060 4.000988 CACGCTACCTCCAGTTACAAAAT 58.999 43.478 0.00 0.00 0.00 1.82
2733 3061 3.395639 CACGCTACCTCCAGTTACAAAA 58.604 45.455 0.00 0.00 0.00 2.44
2734 3062 2.868839 GCACGCTACCTCCAGTTACAAA 60.869 50.000 0.00 0.00 0.00 2.83
2735 3063 1.337447 GCACGCTACCTCCAGTTACAA 60.337 52.381 0.00 0.00 0.00 2.41
2736 3064 0.245539 GCACGCTACCTCCAGTTACA 59.754 55.000 0.00 0.00 0.00 2.41
2737 3065 0.459759 GGCACGCTACCTCCAGTTAC 60.460 60.000 0.00 0.00 0.00 2.50
2738 3066 0.901114 TGGCACGCTACCTCCAGTTA 60.901 55.000 0.00 0.00 0.00 2.24
2739 3067 1.553690 ATGGCACGCTACCTCCAGTT 61.554 55.000 0.00 0.00 31.36 3.16
2740 3068 1.961180 GATGGCACGCTACCTCCAGT 61.961 60.000 0.00 0.00 31.36 4.00
2741 3069 1.227380 GATGGCACGCTACCTCCAG 60.227 63.158 0.00 0.00 31.36 3.86
2742 3070 1.549243 TTGATGGCACGCTACCTCCA 61.549 55.000 0.00 0.00 0.00 3.86
2743 3071 0.392461 TTTGATGGCACGCTACCTCC 60.392 55.000 0.00 0.00 0.00 4.30
2744 3072 1.009829 CTTTGATGGCACGCTACCTC 58.990 55.000 0.00 0.00 0.00 3.85
2745 3073 0.324943 ACTTTGATGGCACGCTACCT 59.675 50.000 0.00 0.00 0.00 3.08
2746 3074 0.727398 GACTTTGATGGCACGCTACC 59.273 55.000 0.00 0.00 0.00 3.18
2747 3075 1.438651 TGACTTTGATGGCACGCTAC 58.561 50.000 0.00 0.00 0.00 3.58
2748 3076 2.177394 TTGACTTTGATGGCACGCTA 57.823 45.000 0.00 0.00 0.00 4.26
2749 3077 1.200716 CATTGACTTTGATGGCACGCT 59.799 47.619 0.00 0.00 0.00 5.07
2750 3078 1.199789 TCATTGACTTTGATGGCACGC 59.800 47.619 0.00 0.00 0.00 5.34
2751 3079 3.127376 TCATCATTGACTTTGATGGCACG 59.873 43.478 12.31 0.00 46.75 5.34
2752 3080 4.707030 TCATCATTGACTTTGATGGCAC 57.293 40.909 12.31 0.00 46.75 5.01
2753 3081 4.707934 ACATCATCATTGACTTTGATGGCA 59.292 37.500 23.07 0.00 46.75 4.92
2754 3082 5.258456 ACATCATCATTGACTTTGATGGC 57.742 39.130 23.07 0.00 46.75 4.40
2755 3083 6.514541 GCCTACATCATCATTGACTTTGATGG 60.515 42.308 23.07 12.81 46.75 3.51
2757 3085 5.533903 GGCCTACATCATCATTGACTTTGAT 59.466 40.000 0.00 0.00 33.85 2.57
2758 3086 4.883585 GGCCTACATCATCATTGACTTTGA 59.116 41.667 0.00 0.00 33.85 2.69
2759 3087 4.641541 TGGCCTACATCATCATTGACTTTG 59.358 41.667 3.32 0.00 33.85 2.77
2760 3088 4.858850 TGGCCTACATCATCATTGACTTT 58.141 39.130 3.32 0.00 33.85 2.66
2761 3089 4.508551 TGGCCTACATCATCATTGACTT 57.491 40.909 3.32 0.00 33.85 3.01
2762 3090 4.719026 ATGGCCTACATCATCATTGACT 57.281 40.909 3.32 0.00 33.53 3.41
2763 3091 6.000219 AGTAATGGCCTACATCATCATTGAC 59.000 40.000 3.32 0.00 39.40 3.18
2764 3092 6.191657 AGTAATGGCCTACATCATCATTGA 57.808 37.500 3.32 0.00 39.40 2.57
2765 3093 6.889301 AAGTAATGGCCTACATCATCATTG 57.111 37.500 3.32 0.00 39.40 2.82
2766 3094 7.062322 TGAAAGTAATGGCCTACATCATCATT 58.938 34.615 3.32 0.00 39.40 2.57
2767 3095 6.604171 TGAAAGTAATGGCCTACATCATCAT 58.396 36.000 3.32 0.00 39.40 2.45
2768 3096 6.000246 TGAAAGTAATGGCCTACATCATCA 58.000 37.500 3.32 0.00 39.40 3.07
2769 3097 6.203723 GTCTGAAAGTAATGGCCTACATCATC 59.796 42.308 3.32 0.00 34.89 2.92
2770 3098 6.058183 GTCTGAAAGTAATGGCCTACATCAT 58.942 40.000 3.32 0.00 34.89 2.45
2771 3099 5.045942 TGTCTGAAAGTAATGGCCTACATCA 60.046 40.000 3.32 7.30 34.89 3.07
2772 3100 5.428253 TGTCTGAAAGTAATGGCCTACATC 58.572 41.667 3.32 2.91 34.89 3.06
2773 3101 5.435686 TGTCTGAAAGTAATGGCCTACAT 57.564 39.130 3.32 0.00 36.85 2.29
2774 3102 4.901197 TGTCTGAAAGTAATGGCCTACA 57.099 40.909 3.32 0.00 33.76 2.74
2775 3103 6.569179 TTTTGTCTGAAAGTAATGGCCTAC 57.431 37.500 3.32 0.00 33.76 3.18
2797 3125 1.134220 TCACCCTGTCGCAGTCTTTTT 60.134 47.619 6.19 0.00 0.00 1.94
2798 3126 0.468226 TCACCCTGTCGCAGTCTTTT 59.532 50.000 6.19 0.00 0.00 2.27
2799 3127 0.249911 GTCACCCTGTCGCAGTCTTT 60.250 55.000 6.19 0.00 0.00 2.52
2800 3128 1.115930 AGTCACCCTGTCGCAGTCTT 61.116 55.000 6.19 0.00 0.00 3.01
2801 3129 1.528292 GAGTCACCCTGTCGCAGTCT 61.528 60.000 6.19 0.00 0.00 3.24
2802 3130 1.080434 GAGTCACCCTGTCGCAGTC 60.080 63.158 6.19 0.00 0.00 3.51
2803 3131 2.574955 GGAGTCACCCTGTCGCAGT 61.575 63.158 6.19 0.00 0.00 4.40
2804 3132 1.892819 ATGGAGTCACCCTGTCGCAG 61.893 60.000 0.00 0.52 38.00 5.18
2805 3133 1.913262 ATGGAGTCACCCTGTCGCA 60.913 57.895 0.00 0.00 38.00 5.10
2806 3134 1.448540 CATGGAGTCACCCTGTCGC 60.449 63.158 0.00 0.00 38.00 5.19
2807 3135 1.975327 ACATGGAGTCACCCTGTCG 59.025 57.895 0.00 0.00 42.34 4.35
2816 3144 8.398665 GTTAAATAACATTGAGGACATGGAGTC 58.601 37.037 0.00 0.00 39.95 3.36
2817 3145 8.281212 GTTAAATAACATTGAGGACATGGAGT 57.719 34.615 0.00 0.00 36.25 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.