Multiple sequence alignment - TraesCS2B01G398800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G398800 chr2B 100.000 4544 0 0 1 4544 566404443 566399900 0.000000e+00 8392.0
1 TraesCS2B01G398800 chr2B 85.391 2868 381 27 701 3558 687208037 687205198 0.000000e+00 2940.0
2 TraesCS2B01G398800 chr2B 86.759 1586 193 7 1986 3570 566391485 566389916 0.000000e+00 1749.0
3 TraesCS2B01G398800 chr2B 82.729 1158 175 18 779 1927 566392734 566391593 0.000000e+00 1007.0
4 TraesCS2B01G398800 chr2D 94.573 3059 143 11 519 3570 482383013 482379971 0.000000e+00 4708.0
5 TraesCS2B01G398800 chr2D 83.552 3429 453 65 194 3558 572258318 572254937 0.000000e+00 3105.0
6 TraesCS2B01G398800 chr2D 84.776 2634 345 33 965 3570 482351081 482348476 0.000000e+00 2591.0
7 TraesCS2B01G398800 chr2D 86.000 550 49 18 1 532 482383602 482383063 8.530000e-157 564.0
8 TraesCS2B01G398800 chr2D 91.045 67 5 1 3840 3906 66151185 66151120 6.260000e-14 89.8
9 TraesCS2B01G398800 chr2D 85.714 84 7 3 3564 3646 431424297 431424218 2.910000e-12 84.2
10 TraesCS2B01G398800 chr2D 100.000 43 0 0 4501 4543 482377658 482377616 3.770000e-11 80.5
11 TraesCS2B01G398800 chr2A 94.109 2852 155 7 719 3570 624968216 624965378 0.000000e+00 4324.0
12 TraesCS2B01G398800 chr2A 84.854 2872 386 35 701 3558 711468432 711465596 0.000000e+00 2848.0
13 TraesCS2B01G398800 chr2A 84.291 2820 379 35 779 3570 624944234 624941451 0.000000e+00 2695.0
14 TraesCS2B01G398800 chr2A 87.352 1265 151 7 2309 3568 757554391 757553131 0.000000e+00 1441.0
15 TraesCS2B01G398800 chr2A 87.299 748 70 16 1 729 624968977 624968236 0.000000e+00 832.0
16 TraesCS2B01G398800 chr1B 81.437 1169 196 18 2273 3425 25259982 25261145 0.000000e+00 937.0
17 TraesCS2B01G398800 chr7D 75.350 929 196 19 991 1898 87995964 87996880 2.530000e-112 416.0
18 TraesCS2B01G398800 chr7D 90.769 65 5 1 3569 3632 86389572 86389636 8.100000e-13 86.1
19 TraesCS2B01G398800 chr1D 75.188 931 194 22 991 1898 17627885 17628801 5.470000e-109 405.0
20 TraesCS2B01G398800 chr1D 74.425 348 76 11 974 1315 496194 496534 2.200000e-28 137.0
21 TraesCS2B01G398800 chr6D 96.296 54 2 0 3583 3636 382077643 382077696 6.260000e-14 89.8
22 TraesCS2B01G398800 chr6B 93.333 60 4 0 3583 3642 15894419 15894478 6.260000e-14 89.8
23 TraesCS2B01G398800 chr6B 93.333 60 4 0 3583 3642 15903445 15903504 6.260000e-14 89.8
24 TraesCS2B01G398800 chr6B 93.333 60 4 0 3583 3642 15923299 15923358 6.260000e-14 89.8
25 TraesCS2B01G398800 chr5B 93.333 60 3 1 3584 3643 470017115 470017057 2.250000e-13 87.9
26 TraesCS2B01G398800 chr4B 92.188 64 1 2 3569 3632 43064239 43064298 2.250000e-13 87.9
27 TraesCS2B01G398800 chr7A 87.324 71 7 2 3583 3652 44444219 44444288 3.770000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G398800 chr2B 566399900 566404443 4543 True 8392.000000 8392 100.000000 1 4544 1 chr2B.!!$R1 4543
1 TraesCS2B01G398800 chr2B 687205198 687208037 2839 True 2940.000000 2940 85.391000 701 3558 1 chr2B.!!$R2 2857
2 TraesCS2B01G398800 chr2B 566389916 566392734 2818 True 1378.000000 1749 84.744000 779 3570 2 chr2B.!!$R3 2791
3 TraesCS2B01G398800 chr2D 572254937 572258318 3381 True 3105.000000 3105 83.552000 194 3558 1 chr2D.!!$R4 3364
4 TraesCS2B01G398800 chr2D 482348476 482351081 2605 True 2591.000000 2591 84.776000 965 3570 1 chr2D.!!$R3 2605
5 TraesCS2B01G398800 chr2D 482377616 482383602 5986 True 1784.166667 4708 93.524333 1 4543 3 chr2D.!!$R5 4542
6 TraesCS2B01G398800 chr2A 711465596 711468432 2836 True 2848.000000 2848 84.854000 701 3558 1 chr2A.!!$R2 2857
7 TraesCS2B01G398800 chr2A 624941451 624944234 2783 True 2695.000000 2695 84.291000 779 3570 1 chr2A.!!$R1 2791
8 TraesCS2B01G398800 chr2A 624965378 624968977 3599 True 2578.000000 4324 90.704000 1 3570 2 chr2A.!!$R4 3569
9 TraesCS2B01G398800 chr2A 757553131 757554391 1260 True 1441.000000 1441 87.352000 2309 3568 1 chr2A.!!$R3 1259
10 TraesCS2B01G398800 chr1B 25259982 25261145 1163 False 937.000000 937 81.437000 2273 3425 1 chr1B.!!$F1 1152
11 TraesCS2B01G398800 chr7D 87995964 87996880 916 False 416.000000 416 75.350000 991 1898 1 chr7D.!!$F2 907
12 TraesCS2B01G398800 chr1D 17627885 17628801 916 False 405.000000 405 75.188000 991 1898 1 chr1D.!!$F2 907

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
767 919 0.180406 ACAGCGTTCACCAGGAGTTT 59.820 50.000 0.00 0.00 0.00 2.66 F
1589 1787 1.278637 CCGAAGCGGTCAACACAAC 59.721 57.895 0.00 0.00 42.73 3.32 F
1662 1860 0.657312 CGTTCAAGTTCAGCACTGCA 59.343 50.000 3.30 0.00 35.12 4.41 F
1967 2165 0.810648 AATACCGCACCTTGCATGTG 59.189 50.000 11.46 11.46 45.36 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1595 1793 0.179029 ACAACGGTTGAACTCCCAGG 60.179 55.0 26.39 0.0 0.0 4.45 R
2451 2720 2.054232 AGCCTCCATGCTGATGAAAG 57.946 50.0 0.00 0.0 40.9 2.62 R
3099 3374 2.353889 TCCGAAGCTGTATACGTCACTC 59.646 50.0 0.00 0.0 0.0 3.51 R
3875 4152 0.808125 GCAATTGGTGGTGTCGCATA 59.192 50.0 7.72 0.0 0.0 3.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.641396 TGCAATGCAGTACCCAGTATATC 58.359 43.478 2.72 0.00 33.32 1.63
83 84 9.783256 AGTGTTAAATGATTAATTTCCGTTAGC 57.217 29.630 0.00 0.00 39.29 3.09
86 87 8.940924 GTTAAATGATTAATTTCCGTTAGCGAC 58.059 33.333 0.00 0.00 39.29 5.19
87 88 6.920569 AATGATTAATTTCCGTTAGCGACT 57.079 33.333 0.00 0.00 41.33 4.18
88 89 5.712217 TGATTAATTTCCGTTAGCGACTG 57.288 39.130 0.00 0.00 41.33 3.51
124 126 8.156165 AGAAGATTCAGAGATGTTCTTTCTTGT 58.844 33.333 0.00 0.00 36.55 3.16
131 133 7.821359 TCAGAGATGTTCTTTCTTGTGGAATAG 59.179 37.037 0.00 0.00 32.41 1.73
132 134 7.821359 CAGAGATGTTCTTTCTTGTGGAATAGA 59.179 37.037 0.00 0.00 32.41 1.98
134 136 7.108847 AGATGTTCTTTCTTGTGGAATAGAGG 58.891 38.462 0.00 0.00 33.53 3.69
143 154 7.361457 TCTTGTGGAATAGAGGACGATAAAT 57.639 36.000 0.00 0.00 0.00 1.40
148 159 8.701895 TGTGGAATAGAGGACGATAAATACTTT 58.298 33.333 0.00 0.00 0.00 2.66
188 203 4.950434 TTATTTTTACGAGGGAAAGCCG 57.050 40.909 0.00 0.00 33.83 5.52
253 268 1.071019 CGGACCATTGACGTCGTCAG 61.071 60.000 25.67 17.74 43.69 3.51
260 277 0.889638 TTGACGTCGTCAGGAGCTCT 60.890 55.000 25.67 0.00 43.69 4.09
261 278 1.299562 TGACGTCGTCAGGAGCTCTC 61.300 60.000 23.70 3.76 37.67 3.20
279 296 4.360563 CTCTCCGTGTATACGCAGAAAAT 58.639 43.478 16.29 0.00 45.66 1.82
361 384 1.030488 CCTCGCCTCTCGGTGTCTTA 61.030 60.000 0.00 0.00 41.65 2.10
362 385 1.025812 CTCGCCTCTCGGTGTCTTAT 58.974 55.000 0.00 0.00 41.65 1.73
363 386 1.002251 CTCGCCTCTCGGTGTCTTATC 60.002 57.143 0.00 0.00 41.65 1.75
400 423 4.326826 CTGAAGCACAAGTAAATCCCTCA 58.673 43.478 0.00 0.00 0.00 3.86
402 425 5.324409 TGAAGCACAAGTAAATCCCTCAAT 58.676 37.500 0.00 0.00 0.00 2.57
403 426 6.480763 TGAAGCACAAGTAAATCCCTCAATA 58.519 36.000 0.00 0.00 0.00 1.90
404 427 6.374333 TGAAGCACAAGTAAATCCCTCAATAC 59.626 38.462 0.00 0.00 0.00 1.89
464 487 8.296713 GCTTATTTCAGGTGAGTTTTATCAACA 58.703 33.333 0.00 0.00 39.49 3.33
527 616 5.625311 CGTTTTTCAGTTTACATGAAGGCTC 59.375 40.000 0.00 0.00 37.91 4.70
575 665 5.450550 GCTGCTTATTTGTTCCCAATACTCC 60.451 44.000 0.00 0.00 0.00 3.85
584 674 4.132336 GTTCCCAATACTCCGAATTACCC 58.868 47.826 0.00 0.00 0.00 3.69
586 676 3.781407 TCCCAATACTCCGAATTACCCAA 59.219 43.478 0.00 0.00 0.00 4.12
608 698 1.732259 CCAGCTAACGGCAAACACTAG 59.268 52.381 0.00 0.00 44.79 2.57
613 703 4.159879 AGCTAACGGCAAACACTAGATAGT 59.840 41.667 0.00 0.00 44.79 2.12
638 728 0.606096 AAAATTAACTGCCGCACCCC 59.394 50.000 0.00 0.00 0.00 4.95
730 881 4.154347 CTCGCTCCCAGGCTCCAC 62.154 72.222 0.00 0.00 0.00 4.02
767 919 0.180406 ACAGCGTTCACCAGGAGTTT 59.820 50.000 0.00 0.00 0.00 2.66
777 929 5.183530 TCACCAGGAGTTTCATGATTGAT 57.816 39.130 0.00 0.00 27.97 2.57
818 971 4.762251 AGCAGATCCTTGTTTGTTAAGACC 59.238 41.667 0.00 0.00 0.00 3.85
831 1002 9.515226 TGTTTGTTAAGACCTCTATAGCAAATT 57.485 29.630 0.00 0.00 0.00 1.82
937 1112 5.106197 GCATCCATTATTCATGCAACCGATA 60.106 40.000 0.00 0.00 42.18 2.92
1001 1181 4.843728 TGTTTTCTTATTCTCCAGCCGAT 58.156 39.130 0.00 0.00 0.00 4.18
1278 1476 3.071892 CCCGGGTGCTTAATTACATCCTA 59.928 47.826 14.18 0.00 34.72 2.94
1570 1768 4.509230 TGTACTACTACGACATAGCCTTCG 59.491 45.833 0.00 0.00 41.14 3.79
1589 1787 1.278637 CCGAAGCGGTCAACACAAC 59.721 57.895 0.00 0.00 42.73 3.32
1595 1793 1.400494 AGCGGTCAACACAACTGAAAC 59.600 47.619 0.00 0.00 0.00 2.78
1662 1860 0.657312 CGTTCAAGTTCAGCACTGCA 59.343 50.000 3.30 0.00 35.12 4.41
1783 1981 5.864418 ACAGAATAAGACCGGCACTTATA 57.136 39.130 24.78 9.77 38.91 0.98
1915 2113 5.857822 AGGTAACGATTAACTTTGAGTGC 57.142 39.130 0.00 0.00 46.39 4.40
1928 2126 7.807977 AACTTTGAGTGCCAATGTATATAGG 57.192 36.000 0.00 0.00 40.80 2.57
1929 2127 7.136822 ACTTTGAGTGCCAATGTATATAGGA 57.863 36.000 0.00 0.00 40.16 2.94
1930 2128 7.220030 ACTTTGAGTGCCAATGTATATAGGAG 58.780 38.462 0.00 0.00 40.16 3.69
1931 2129 6.747414 TTGAGTGCCAATGTATATAGGAGT 57.253 37.500 0.00 0.00 0.00 3.85
1932 2130 7.849322 TTGAGTGCCAATGTATATAGGAGTA 57.151 36.000 0.00 0.00 0.00 2.59
1935 2133 7.454694 TGAGTGCCAATGTATATAGGAGTATGT 59.545 37.037 0.00 0.00 0.00 2.29
1953 2151 6.928520 AGTATGTACTAACGCCCATAATACC 58.071 40.000 0.00 0.00 34.13 2.73
1967 2165 0.810648 AATACCGCACCTTGCATGTG 59.189 50.000 11.46 11.46 45.36 3.21
1983 2206 3.745797 GCATGTGGAGGTCCCTTTATCTC 60.746 52.174 0.00 0.00 35.38 2.75
1989 2243 4.715297 TGGAGGTCCCTTTATCTCACTTAC 59.285 45.833 0.00 0.00 35.38 2.34
2451 2720 5.432885 TGCAAAAAGTTAAGCAGGAGTAC 57.567 39.130 0.00 0.00 32.48 2.73
2598 2867 1.186200 GAAAAGGAGGCCATGGAACC 58.814 55.000 18.40 14.67 0.00 3.62
2955 3230 4.590850 AAAAACTTCCAACATCCTGCTC 57.409 40.909 0.00 0.00 0.00 4.26
3099 3374 5.682862 GCAAACATGTCAGTTAACAGACAAG 59.317 40.000 30.00 27.61 43.80 3.16
3177 3452 0.541998 TGAAGCTCGAGGGGTCTGAA 60.542 55.000 15.58 0.00 0.00 3.02
3249 3524 6.365970 AATCTAGATTCTGTGTTGGTGAGT 57.634 37.500 12.37 0.00 0.00 3.41
3579 3854 9.592196 TGTATAATAAACTATTACTCCCTCCGT 57.408 33.333 0.00 0.00 33.80 4.69
3581 3856 8.953223 ATAATAAACTATTACTCCCTCCGTCT 57.047 34.615 0.00 0.00 33.80 4.18
3582 3857 7.672122 AATAAACTATTACTCCCTCCGTCTT 57.328 36.000 0.00 0.00 0.00 3.01
3583 3858 8.773033 AATAAACTATTACTCCCTCCGTCTTA 57.227 34.615 0.00 0.00 0.00 2.10
3584 3859 6.462552 AAACTATTACTCCCTCCGTCTTAC 57.537 41.667 0.00 0.00 0.00 2.34
3585 3860 5.385628 ACTATTACTCCCTCCGTCTTACT 57.614 43.478 0.00 0.00 0.00 2.24
3586 3861 6.506538 ACTATTACTCCCTCCGTCTTACTA 57.493 41.667 0.00 0.00 0.00 1.82
3587 3862 6.904626 ACTATTACTCCCTCCGTCTTACTAA 58.095 40.000 0.00 0.00 0.00 2.24
3588 3863 7.349598 ACTATTACTCCCTCCGTCTTACTAAA 58.650 38.462 0.00 0.00 0.00 1.85
3589 3864 6.712179 ATTACTCCCTCCGTCTTACTAAAG 57.288 41.667 0.00 0.00 0.00 1.85
3590 3865 4.044946 ACTCCCTCCGTCTTACTAAAGT 57.955 45.455 0.00 0.00 34.13 2.66
3591 3866 4.414677 ACTCCCTCCGTCTTACTAAAGTT 58.585 43.478 0.00 0.00 34.13 2.66
3592 3867 5.574188 ACTCCCTCCGTCTTACTAAAGTTA 58.426 41.667 0.00 0.00 34.13 2.24
3593 3868 5.651576 ACTCCCTCCGTCTTACTAAAGTTAG 59.348 44.000 0.00 0.00 36.82 2.34
3594 3869 5.574188 TCCCTCCGTCTTACTAAAGTTAGT 58.426 41.667 8.67 8.67 45.39 2.24
3595 3870 6.721318 TCCCTCCGTCTTACTAAAGTTAGTA 58.279 40.000 6.81 6.81 43.36 1.82
3596 3871 6.599638 TCCCTCCGTCTTACTAAAGTTAGTAC 59.400 42.308 9.88 2.45 43.73 2.73
3597 3872 6.375455 CCCTCCGTCTTACTAAAGTTAGTACA 59.625 42.308 9.88 0.00 43.73 2.90
3598 3873 7.094205 CCCTCCGTCTTACTAAAGTTAGTACAA 60.094 40.741 9.88 0.00 43.73 2.41
3599 3874 8.299570 CCTCCGTCTTACTAAAGTTAGTACAAA 58.700 37.037 9.88 0.00 43.73 2.83
3600 3875 9.683069 CTCCGTCTTACTAAAGTTAGTACAAAA 57.317 33.333 9.88 0.00 43.73 2.44
3618 3893 9.965824 AGTACAAAATTGAGTCACTTATTTTGG 57.034 29.630 28.46 18.25 45.43 3.28
3619 3894 9.191995 GTACAAAATTGAGTCACTTATTTTGGG 57.808 33.333 28.46 15.64 45.43 4.12
3620 3895 8.017418 ACAAAATTGAGTCACTTATTTTGGGA 57.983 30.769 28.46 1.96 45.43 4.37
3621 3896 8.650490 ACAAAATTGAGTCACTTATTTTGGGAT 58.350 29.630 28.46 15.63 45.43 3.85
3622 3897 8.928733 CAAAATTGAGTCACTTATTTTGGGATG 58.071 33.333 22.69 7.72 41.13 3.51
3623 3898 6.780457 ATTGAGTCACTTATTTTGGGATGG 57.220 37.500 0.00 0.00 0.00 3.51
3624 3899 5.512942 TGAGTCACTTATTTTGGGATGGA 57.487 39.130 0.00 0.00 0.00 3.41
3625 3900 5.500234 TGAGTCACTTATTTTGGGATGGAG 58.500 41.667 0.00 0.00 0.00 3.86
3626 3901 4.860022 AGTCACTTATTTTGGGATGGAGG 58.140 43.478 0.00 0.00 0.00 4.30
3627 3902 3.954258 GTCACTTATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
3628 3903 3.855599 TCACTTATTTTGGGATGGAGGGA 59.144 43.478 0.00 0.00 0.00 4.20
3629 3904 4.079787 TCACTTATTTTGGGATGGAGGGAG 60.080 45.833 0.00 0.00 0.00 4.30
3630 3905 3.858638 ACTTATTTTGGGATGGAGGGAGT 59.141 43.478 0.00 0.00 0.00 3.85
3631 3906 5.043762 ACTTATTTTGGGATGGAGGGAGTA 58.956 41.667 0.00 0.00 0.00 2.59
3632 3907 5.676811 ACTTATTTTGGGATGGAGGGAGTAT 59.323 40.000 0.00 0.00 0.00 2.12
3633 3908 6.162241 ACTTATTTTGGGATGGAGGGAGTATT 59.838 38.462 0.00 0.00 0.00 1.89
3634 3909 7.352522 ACTTATTTTGGGATGGAGGGAGTATTA 59.647 37.037 0.00 0.00 0.00 0.98
3635 3910 6.803587 ATTTTGGGATGGAGGGAGTATTAT 57.196 37.500 0.00 0.00 0.00 1.28
3636 3911 7.905144 ATTTTGGGATGGAGGGAGTATTATA 57.095 36.000 0.00 0.00 0.00 0.98
3637 3912 6.697641 TTTGGGATGGAGGGAGTATTATAC 57.302 41.667 0.00 0.00 0.00 1.47
3638 3913 5.363124 TGGGATGGAGGGAGTATTATACA 57.637 43.478 5.11 0.00 0.00 2.29
3639 3914 5.927465 TGGGATGGAGGGAGTATTATACAT 58.073 41.667 5.11 0.00 0.00 2.29
3640 3915 5.726308 TGGGATGGAGGGAGTATTATACATG 59.274 44.000 5.11 0.00 0.00 3.21
3641 3916 5.726793 GGGATGGAGGGAGTATTATACATGT 59.273 44.000 2.69 2.69 0.00 3.21
3642 3917 6.352222 GGGATGGAGGGAGTATTATACATGTG 60.352 46.154 9.11 0.00 0.00 3.21
3643 3918 6.213600 GGATGGAGGGAGTATTATACATGTGT 59.786 42.308 9.11 4.04 0.00 3.72
3644 3919 6.419484 TGGAGGGAGTATTATACATGTGTG 57.581 41.667 9.11 0.00 0.00 3.82
3645 3920 5.903010 TGGAGGGAGTATTATACATGTGTGT 59.097 40.000 9.11 0.00 42.39 3.72
3646 3921 6.385759 TGGAGGGAGTATTATACATGTGTGTT 59.614 38.462 9.11 0.00 39.77 3.32
3647 3922 7.565768 TGGAGGGAGTATTATACATGTGTGTTA 59.434 37.037 9.11 0.00 39.77 2.41
3648 3923 8.426489 GGAGGGAGTATTATACATGTGTGTTAA 58.574 37.037 9.11 2.02 39.77 2.01
3649 3924 9.998106 GAGGGAGTATTATACATGTGTGTTAAT 57.002 33.333 9.11 9.01 39.77 1.40
3650 3925 9.998106 AGGGAGTATTATACATGTGTGTTAATC 57.002 33.333 9.11 7.01 39.77 1.75
3651 3926 9.998106 GGGAGTATTATACATGTGTGTTAATCT 57.002 33.333 9.11 6.51 39.77 2.40
3682 3957 6.176183 ACTACATGAAGATTGTTCCTTCTGG 58.824 40.000 0.00 0.00 40.37 3.86
3687 3962 5.694995 TGAAGATTGTTCCTTCTGGACTTT 58.305 37.500 0.00 0.00 43.06 2.66
3692 3967 7.234355 AGATTGTTCCTTCTGGACTTTGTTAT 58.766 34.615 0.00 0.00 43.06 1.89
3696 3971 6.655003 TGTTCCTTCTGGACTTTGTTATCATC 59.345 38.462 0.00 0.00 43.06 2.92
3736 4012 5.661056 TCTAGACCTTCTTACCATGTGTG 57.339 43.478 0.00 0.00 0.00 3.82
3739 4015 5.818678 AGACCTTCTTACCATGTGTGTTA 57.181 39.130 0.00 0.00 0.00 2.41
3755 4031 7.459795 TGTGTGTTATATTTTGAGGATTGCA 57.540 32.000 0.00 0.00 0.00 4.08
3776 4052 5.430417 TGCATGTACCTTTCCTAATAGGGAA 59.570 40.000 6.46 2.82 42.86 3.97
3791 4067 7.821846 CCTAATAGGGAATCTATCTCTTGCAAC 59.178 40.741 0.00 0.00 40.29 4.17
3841 4118 5.034554 ACATTCGATGTGTGATGTGAAAC 57.965 39.130 3.45 0.00 43.01 2.78
3861 4138 4.806342 ACAACAAGTTTTACCGCTACAG 57.194 40.909 0.00 0.00 0.00 2.74
3864 4141 5.464389 ACAACAAGTTTTACCGCTACAGTAG 59.536 40.000 2.85 2.85 0.00 2.57
3865 4142 9.312303 AACAACAAGTTTTACCGCTACAGTAGC 62.312 40.741 21.13 21.13 42.34 3.58
3889 4166 1.024046 GCATGTATGCGACACCACCA 61.024 55.000 0.53 0.00 44.67 4.17
3891 4168 2.016318 CATGTATGCGACACCACCAAT 58.984 47.619 0.00 0.00 42.17 3.16
3893 4170 1.809547 TGTATGCGACACCACCAATTG 59.190 47.619 0.00 0.00 31.20 2.32
3898 4175 1.405105 GCGACACCACCAATTGCATAT 59.595 47.619 0.00 0.00 0.00 1.78
3899 4176 2.541588 GCGACACCACCAATTGCATATC 60.542 50.000 0.00 0.00 0.00 1.63
3901 4178 3.002656 CGACACCACCAATTGCATATCTC 59.997 47.826 0.00 0.00 0.00 2.75
3902 4179 4.202441 GACACCACCAATTGCATATCTCT 58.798 43.478 0.00 0.00 0.00 3.10
3903 4180 4.202441 ACACCACCAATTGCATATCTCTC 58.798 43.478 0.00 0.00 0.00 3.20
3904 4181 4.201657 CACCACCAATTGCATATCTCTCA 58.798 43.478 0.00 0.00 0.00 3.27
3909 4186 6.938596 CCACCAATTGCATATCTCTCATCTAA 59.061 38.462 0.00 0.00 0.00 2.10
3910 4187 7.094890 CCACCAATTGCATATCTCTCATCTAAC 60.095 40.741 0.00 0.00 0.00 2.34
3911 4188 7.443272 CACCAATTGCATATCTCTCATCTAACA 59.557 37.037 0.00 0.00 0.00 2.41
3912 4189 8.162085 ACCAATTGCATATCTCTCATCTAACAT 58.838 33.333 0.00 0.00 0.00 2.71
3913 4190 9.662947 CCAATTGCATATCTCTCATCTAACATA 57.337 33.333 0.00 0.00 0.00 2.29
3918 4195 9.649167 TGCATATCTCTCATCTAACATACATTG 57.351 33.333 0.00 0.00 0.00 2.82
3952 4229 8.915871 TGCAAGAAAAATTATGCAAGAGTATC 57.084 30.769 0.00 0.00 45.04 2.24
3977 4254 6.852858 GCCTTTTGCAGGTAAATTTTGTAA 57.147 33.333 0.00 0.00 46.07 2.41
3978 4255 6.887368 GCCTTTTGCAGGTAAATTTTGTAAG 58.113 36.000 0.00 0.00 46.07 2.34
3979 4256 6.704050 GCCTTTTGCAGGTAAATTTTGTAAGA 59.296 34.615 0.00 0.00 46.07 2.10
3980 4257 7.225734 GCCTTTTGCAGGTAAATTTTGTAAGAA 59.774 33.333 0.00 0.00 46.07 2.52
3981 4258 8.764287 CCTTTTGCAGGTAAATTTTGTAAGAAG 58.236 33.333 0.00 2.74 37.99 2.85
3982 4259 9.528018 CTTTTGCAGGTAAATTTTGTAAGAAGA 57.472 29.630 0.00 0.00 0.00 2.87
3993 4270 9.612066 AAATTTTGTAAGAAGATTTTGGAAGCA 57.388 25.926 0.00 0.00 0.00 3.91
3994 4271 9.612066 AATTTTGTAAGAAGATTTTGGAAGCAA 57.388 25.926 0.00 0.00 0.00 3.91
3995 4272 9.612066 ATTTTGTAAGAAGATTTTGGAAGCAAA 57.388 25.926 0.00 0.00 0.00 3.68
3996 4273 9.612066 TTTTGTAAGAAGATTTTGGAAGCAAAT 57.388 25.926 0.00 0.00 0.00 2.32
3997 4274 9.612066 TTTGTAAGAAGATTTTGGAAGCAAATT 57.388 25.926 0.00 0.00 0.00 1.82
3998 4275 9.612066 TTGTAAGAAGATTTTGGAAGCAAATTT 57.388 25.926 0.00 0.00 0.00 1.82
3999 4276 9.612066 TGTAAGAAGATTTTGGAAGCAAATTTT 57.388 25.926 0.00 0.00 0.00 1.82
4000 4277 9.868389 GTAAGAAGATTTTGGAAGCAAATTTTG 57.132 29.630 4.72 4.72 0.00 2.44
4020 4297 1.525941 CAAGCCAAAATTGCAAGGGG 58.474 50.000 4.94 4.72 0.00 4.79
4021 4298 1.072015 CAAGCCAAAATTGCAAGGGGA 59.928 47.619 4.94 0.00 0.00 4.81
4022 4299 0.686789 AGCCAAAATTGCAAGGGGAC 59.313 50.000 4.94 0.95 0.00 4.46
4038 4315 4.626081 ACCCGCGTCTTGCTGCTT 62.626 61.111 4.92 0.00 43.27 3.91
4039 4316 2.434185 CCCGCGTCTTGCTGCTTA 60.434 61.111 4.92 0.00 43.27 3.09
4040 4317 2.032634 CCCGCGTCTTGCTGCTTAA 61.033 57.895 4.92 0.00 43.27 1.85
4041 4318 1.369091 CCCGCGTCTTGCTGCTTAAT 61.369 55.000 4.92 0.00 43.27 1.40
4042 4319 0.447801 CCGCGTCTTGCTGCTTAATT 59.552 50.000 4.92 0.00 43.27 1.40
4043 4320 1.135689 CCGCGTCTTGCTGCTTAATTT 60.136 47.619 4.92 0.00 43.27 1.82
4044 4321 2.584791 CGCGTCTTGCTGCTTAATTTT 58.415 42.857 0.00 0.00 43.27 1.82
4045 4322 2.339400 CGCGTCTTGCTGCTTAATTTTG 59.661 45.455 0.00 0.00 43.27 2.44
4046 4323 2.091122 GCGTCTTGCTGCTTAATTTTGC 59.909 45.455 0.00 0.00 41.73 3.68
4047 4324 3.307674 CGTCTTGCTGCTTAATTTTGCA 58.692 40.909 0.00 5.22 37.63 4.08
4048 4325 3.735240 CGTCTTGCTGCTTAATTTTGCAA 59.265 39.130 0.00 0.00 40.65 4.08
4053 4330 6.674694 TTGCTGCTTAATTTTGCAAGAAAA 57.325 29.167 0.00 0.00 38.49 2.29
4105 5065 6.331369 ACCATATTATAGCACAAACCATGC 57.669 37.500 0.00 0.00 43.74 4.06
4106 5066 5.243730 ACCATATTATAGCACAAACCATGCC 59.756 40.000 0.00 0.00 44.53 4.40
4107 5067 5.243507 CCATATTATAGCACAAACCATGCCA 59.756 40.000 0.00 0.00 44.53 4.92
4108 5068 6.071221 CCATATTATAGCACAAACCATGCCAT 60.071 38.462 0.00 0.00 44.53 4.40
4110 5070 8.689061 CATATTATAGCACAAACCATGCCATAT 58.311 33.333 0.00 0.00 44.53 1.78
4111 5071 6.975196 TTATAGCACAAACCATGCCATATT 57.025 33.333 0.00 0.00 44.53 1.28
4112 5072 8.648698 ATTATAGCACAAACCATGCCATATTA 57.351 30.769 0.00 0.00 44.53 0.98
4114 5074 5.458041 AGCACAAACCATGCCATATTATC 57.542 39.130 0.00 0.00 44.53 1.75
4115 5075 4.894705 AGCACAAACCATGCCATATTATCA 59.105 37.500 0.00 0.00 44.53 2.15
4116 5076 4.984161 GCACAAACCATGCCATATTATCAC 59.016 41.667 0.00 0.00 37.08 3.06
4117 5077 5.214417 CACAAACCATGCCATATTATCACG 58.786 41.667 0.00 0.00 0.00 4.35
4118 5078 4.229096 CAAACCATGCCATATTATCACGC 58.771 43.478 0.00 0.00 0.00 5.34
4119 5079 2.076100 ACCATGCCATATTATCACGCG 58.924 47.619 3.53 3.53 0.00 6.01
4120 5080 2.289382 ACCATGCCATATTATCACGCGA 60.289 45.455 15.93 0.00 0.00 5.87
4121 5081 2.741517 CCATGCCATATTATCACGCGAA 59.258 45.455 15.93 0.00 0.00 4.70
4124 5084 2.139917 GCCATATTATCACGCGAACCA 58.860 47.619 15.93 0.00 0.00 3.67
4126 5086 3.930229 GCCATATTATCACGCGAACCATA 59.070 43.478 15.93 2.55 0.00 2.74
4127 5087 4.390603 GCCATATTATCACGCGAACCATAA 59.609 41.667 15.93 9.50 0.00 1.90
4128 5088 5.445939 GCCATATTATCACGCGAACCATAAG 60.446 44.000 15.93 0.00 0.00 1.73
4129 5089 5.867174 CCATATTATCACGCGAACCATAAGA 59.133 40.000 15.93 6.97 0.00 2.10
4133 5093 6.483385 TTATCACGCGAACCATAAGAAAAA 57.517 33.333 15.93 0.00 0.00 1.94
4134 5094 4.136517 TCACGCGAACCATAAGAAAAAC 57.863 40.909 15.93 0.00 0.00 2.43
4135 5095 3.058777 TCACGCGAACCATAAGAAAAACC 60.059 43.478 15.93 0.00 0.00 3.27
4136 5096 3.058501 CACGCGAACCATAAGAAAAACCT 60.059 43.478 15.93 0.00 0.00 3.50
4137 5097 3.566742 ACGCGAACCATAAGAAAAACCTT 59.433 39.130 15.93 0.00 0.00 3.50
4138 5098 4.037089 ACGCGAACCATAAGAAAAACCTTT 59.963 37.500 15.93 0.00 0.00 3.11
4139 5099 4.381566 CGCGAACCATAAGAAAAACCTTTG 59.618 41.667 0.00 0.00 0.00 2.77
4140 5100 5.286438 GCGAACCATAAGAAAAACCTTTGT 58.714 37.500 0.00 0.00 0.00 2.83
4142 5102 6.500041 CGAACCATAAGAAAAACCTTTGTCA 58.500 36.000 0.00 0.00 0.00 3.58
4143 5103 7.145323 CGAACCATAAGAAAAACCTTTGTCAT 58.855 34.615 0.00 0.00 0.00 3.06
4144 5104 7.651704 CGAACCATAAGAAAAACCTTTGTCATT 59.348 33.333 0.00 0.00 0.00 2.57
4145 5105 8.661352 AACCATAAGAAAAACCTTTGTCATTG 57.339 30.769 0.00 0.00 0.00 2.82
4146 5106 6.705825 ACCATAAGAAAAACCTTTGTCATTGC 59.294 34.615 0.00 0.00 0.00 3.56
4147 5107 6.128849 CCATAAGAAAAACCTTTGTCATTGCG 60.129 38.462 0.00 0.00 0.00 4.85
4148 5108 4.647424 AGAAAAACCTTTGTCATTGCGA 57.353 36.364 0.00 0.00 0.00 5.10
4150 5110 6.325919 AGAAAAACCTTTGTCATTGCGATA 57.674 33.333 0.00 0.00 0.00 2.92
4151 5111 6.381801 AGAAAAACCTTTGTCATTGCGATAG 58.618 36.000 0.00 0.00 0.00 2.08
4152 5112 5.705609 AAAACCTTTGTCATTGCGATAGT 57.294 34.783 0.00 0.00 39.35 2.12
4153 5113 6.811253 AAAACCTTTGTCATTGCGATAGTA 57.189 33.333 0.00 0.00 39.35 1.82
4154 5114 7.391148 AAAACCTTTGTCATTGCGATAGTAT 57.609 32.000 0.00 0.00 39.35 2.12
4155 5115 6.604735 AACCTTTGTCATTGCGATAGTATC 57.395 37.500 0.00 0.00 39.35 2.24
4156 5116 5.918608 ACCTTTGTCATTGCGATAGTATCT 58.081 37.500 8.49 0.00 39.35 1.98
4157 5117 6.349300 ACCTTTGTCATTGCGATAGTATCTT 58.651 36.000 8.49 0.00 39.35 2.40
4165 5625 8.821894 GTCATTGCGATAGTATCTTTTTCTTCT 58.178 33.333 8.49 0.00 39.35 2.85
4166 5626 9.383519 TCATTGCGATAGTATCTTTTTCTTCTT 57.616 29.630 8.49 0.00 39.35 2.52
4168 5628 8.547967 TTGCGATAGTATCTTTTTCTTCTTGT 57.452 30.769 8.49 0.00 39.35 3.16
4169 5629 8.547967 TGCGATAGTATCTTTTTCTTCTTGTT 57.452 30.769 8.49 0.00 39.35 2.83
4170 5630 8.999431 TGCGATAGTATCTTTTTCTTCTTGTTT 58.001 29.630 8.49 0.00 39.35 2.83
4198 5658 6.500684 TTTCTCATTTTCATCTTCTTCCCG 57.499 37.500 0.00 0.00 0.00 5.14
4199 5659 5.165961 TCTCATTTTCATCTTCTTCCCGT 57.834 39.130 0.00 0.00 0.00 5.28
4201 5661 6.707290 TCTCATTTTCATCTTCTTCCCGTAA 58.293 36.000 0.00 0.00 0.00 3.18
4203 5663 6.472887 TCATTTTCATCTTCTTCCCGTAAGT 58.527 36.000 0.00 0.00 36.51 2.24
4204 5664 7.617225 TCATTTTCATCTTCTTCCCGTAAGTA 58.383 34.615 0.00 0.00 36.51 2.24
4205 5665 7.548075 TCATTTTCATCTTCTTCCCGTAAGTAC 59.452 37.037 0.00 0.00 36.51 2.73
4208 5668 5.014858 TCATCTTCTTCCCGTAAGTACAGT 58.985 41.667 0.00 0.00 36.51 3.55
4210 5670 6.318144 TCATCTTCTTCCCGTAAGTACAGTAG 59.682 42.308 0.00 0.00 36.51 2.57
4211 5671 4.397417 TCTTCTTCCCGTAAGTACAGTAGC 59.603 45.833 0.00 0.00 36.51 3.58
4212 5672 3.960571 TCTTCCCGTAAGTACAGTAGCT 58.039 45.455 0.00 0.00 36.51 3.32
4213 5673 3.693085 TCTTCCCGTAAGTACAGTAGCTG 59.307 47.826 0.00 0.00 36.51 4.24
4215 5675 1.749634 CCCGTAAGTACAGTAGCTGCT 59.250 52.381 7.57 7.57 34.37 4.24
4216 5676 2.223525 CCCGTAAGTACAGTAGCTGCTC 60.224 54.545 4.91 0.00 34.37 4.26
4217 5677 2.683867 CCGTAAGTACAGTAGCTGCTCT 59.316 50.000 4.91 0.07 34.37 4.09
4218 5678 3.242804 CCGTAAGTACAGTAGCTGCTCTC 60.243 52.174 4.91 0.51 34.37 3.20
4219 5679 3.374367 CGTAAGTACAGTAGCTGCTCTCA 59.626 47.826 4.91 0.00 34.37 3.27
4220 5680 3.859411 AAGTACAGTAGCTGCTCTCAC 57.141 47.619 4.91 0.00 34.37 3.51
4221 5681 2.096248 AGTACAGTAGCTGCTCTCACC 58.904 52.381 4.91 0.00 34.37 4.02
4222 5682 2.096248 GTACAGTAGCTGCTCTCACCT 58.904 52.381 4.91 0.00 34.37 4.00
4223 5683 1.638529 ACAGTAGCTGCTCTCACCTT 58.361 50.000 4.91 0.00 34.37 3.50
4224 5684 1.974236 ACAGTAGCTGCTCTCACCTTT 59.026 47.619 4.91 0.00 34.37 3.11
4225 5685 2.370189 ACAGTAGCTGCTCTCACCTTTT 59.630 45.455 4.91 0.00 34.37 2.27
4226 5686 3.181450 ACAGTAGCTGCTCTCACCTTTTT 60.181 43.478 4.91 0.00 34.37 1.94
4246 5706 4.815533 TTTGACAGAGAGATGAGGAAGG 57.184 45.455 0.00 0.00 0.00 3.46
4248 5708 4.262891 TGACAGAGAGATGAGGAAGGAT 57.737 45.455 0.00 0.00 0.00 3.24
4249 5709 4.214310 TGACAGAGAGATGAGGAAGGATC 58.786 47.826 0.00 0.00 0.00 3.36
4250 5710 3.221771 ACAGAGAGATGAGGAAGGATCG 58.778 50.000 0.00 0.00 0.00 3.69
4251 5711 3.221771 CAGAGAGATGAGGAAGGATCGT 58.778 50.000 0.00 0.00 0.00 3.73
4252 5712 4.141367 ACAGAGAGATGAGGAAGGATCGTA 60.141 45.833 0.00 0.00 0.00 3.43
4253 5713 4.455533 CAGAGAGATGAGGAAGGATCGTAG 59.544 50.000 0.00 0.00 0.00 3.51
4265 6300 9.543783 GAGGAAGGATCGTAGTAAATACAAAAT 57.456 33.333 0.00 0.00 33.65 1.82
4266 6301 9.326413 AGGAAGGATCGTAGTAAATACAAAATG 57.674 33.333 0.00 0.00 33.65 2.32
4267 6302 9.321562 GGAAGGATCGTAGTAAATACAAAATGA 57.678 33.333 0.00 0.00 33.65 2.57
4269 6304 9.661563 AAGGATCGTAGTAAATACAAAATGACA 57.338 29.630 0.00 0.00 33.65 3.58
4270 6305 9.832445 AGGATCGTAGTAAATACAAAATGACAT 57.168 29.630 0.00 0.00 33.65 3.06
4271 6306 9.864034 GGATCGTAGTAAATACAAAATGACATG 57.136 33.333 0.00 0.00 33.65 3.21
4272 6307 9.370126 GATCGTAGTAAATACAAAATGACATGC 57.630 33.333 0.00 0.00 33.65 4.06
4273 6308 7.395645 TCGTAGTAAATACAAAATGACATGCG 58.604 34.615 0.00 0.00 33.65 4.73
4274 6309 7.063662 TCGTAGTAAATACAAAATGACATGCGT 59.936 33.333 0.00 0.00 33.65 5.24
4275 6310 7.161900 CGTAGTAAATACAAAATGACATGCGTG 59.838 37.037 3.82 3.82 33.65 5.34
4276 6311 5.799936 AGTAAATACAAAATGACATGCGTGC 59.200 36.000 5.64 0.00 0.00 5.34
4277 6312 3.846423 ATACAAAATGACATGCGTGCA 57.154 38.095 5.64 5.66 0.00 4.57
4278 6313 2.054687 ACAAAATGACATGCGTGCAG 57.945 45.000 5.64 0.00 0.00 4.41
4317 6352 1.590932 CATCTGTGCATGTCCTAGCC 58.409 55.000 0.00 0.00 0.00 3.93
4318 6353 1.134310 CATCTGTGCATGTCCTAGCCA 60.134 52.381 0.00 0.00 0.00 4.75
4319 6354 0.983467 TCTGTGCATGTCCTAGCCAA 59.017 50.000 0.00 0.00 0.00 4.52
4320 6355 1.350684 TCTGTGCATGTCCTAGCCAAA 59.649 47.619 0.00 0.00 0.00 3.28
4321 6356 1.741706 CTGTGCATGTCCTAGCCAAAG 59.258 52.381 0.00 0.00 0.00 2.77
4322 6357 1.073763 TGTGCATGTCCTAGCCAAAGT 59.926 47.619 0.00 0.00 0.00 2.66
4323 6358 2.304470 TGTGCATGTCCTAGCCAAAGTA 59.696 45.455 0.00 0.00 0.00 2.24
4324 6359 3.054434 TGTGCATGTCCTAGCCAAAGTAT 60.054 43.478 0.00 0.00 0.00 2.12
4325 6360 3.947834 GTGCATGTCCTAGCCAAAGTATT 59.052 43.478 0.00 0.00 0.00 1.89
4326 6361 3.947196 TGCATGTCCTAGCCAAAGTATTG 59.053 43.478 0.00 0.00 36.25 1.90
4327 6362 3.243201 GCATGTCCTAGCCAAAGTATTGC 60.243 47.826 0.00 0.00 35.10 3.56
4328 6363 4.202441 CATGTCCTAGCCAAAGTATTGCT 58.798 43.478 0.00 0.00 35.10 3.91
4329 6364 3.873910 TGTCCTAGCCAAAGTATTGCTC 58.126 45.455 0.00 0.00 35.10 4.26
4330 6365 3.263170 TGTCCTAGCCAAAGTATTGCTCA 59.737 43.478 0.00 0.00 35.10 4.26
4331 6366 4.080356 TGTCCTAGCCAAAGTATTGCTCAT 60.080 41.667 0.00 0.00 35.10 2.90
4332 6367 4.884164 GTCCTAGCCAAAGTATTGCTCATT 59.116 41.667 0.00 0.00 35.10 2.57
4333 6368 5.008118 GTCCTAGCCAAAGTATTGCTCATTC 59.992 44.000 0.00 0.00 35.10 2.67
4334 6369 4.024556 CCTAGCCAAAGTATTGCTCATTCG 60.025 45.833 0.00 0.00 35.10 3.34
4335 6370 2.098117 AGCCAAAGTATTGCTCATTCGC 59.902 45.455 0.00 0.00 35.10 4.70
4336 6371 2.098117 GCCAAAGTATTGCTCATTCGCT 59.902 45.455 0.00 0.00 35.10 4.93
4337 6372 3.790123 GCCAAAGTATTGCTCATTCGCTC 60.790 47.826 0.00 0.00 35.10 5.03
4338 6373 3.624861 CCAAAGTATTGCTCATTCGCTCT 59.375 43.478 0.00 0.00 35.10 4.09
4339 6374 4.095483 CCAAAGTATTGCTCATTCGCTCTT 59.905 41.667 0.00 0.00 35.10 2.85
4340 6375 4.871993 AAGTATTGCTCATTCGCTCTTG 57.128 40.909 0.00 0.00 0.00 3.02
4341 6376 2.611292 AGTATTGCTCATTCGCTCTTGC 59.389 45.455 0.00 0.00 0.00 4.01
4342 6377 1.747709 ATTGCTCATTCGCTCTTGCT 58.252 45.000 0.00 0.00 36.97 3.91
4343 6378 0.800631 TTGCTCATTCGCTCTTGCTG 59.199 50.000 0.00 0.00 36.97 4.41
4344 6379 1.062206 GCTCATTCGCTCTTGCTGC 59.938 57.895 0.00 0.00 36.97 5.25
4345 6380 1.642037 GCTCATTCGCTCTTGCTGCA 61.642 55.000 0.00 0.00 36.97 4.41
4346 6381 1.015109 CTCATTCGCTCTTGCTGCAT 58.985 50.000 1.84 0.00 36.97 3.96
4347 6382 0.730840 TCATTCGCTCTTGCTGCATG 59.269 50.000 1.84 6.12 36.97 4.06
4348 6383 0.866061 CATTCGCTCTTGCTGCATGC 60.866 55.000 11.82 11.82 43.25 4.06
4367 6402 2.624316 CATTCACTGCATTCGCTTGT 57.376 45.000 0.00 0.00 39.64 3.16
4368 6403 2.512885 CATTCACTGCATTCGCTTGTC 58.487 47.619 0.00 0.00 39.64 3.18
4369 6404 0.874390 TTCACTGCATTCGCTTGTCC 59.126 50.000 0.00 0.00 39.64 4.02
4370 6405 0.250252 TCACTGCATTCGCTTGTCCA 60.250 50.000 0.00 0.00 39.64 4.02
4371 6406 0.167470 CACTGCATTCGCTTGTCCAG 59.833 55.000 0.00 0.00 39.64 3.86
4372 6407 1.136147 CTGCATTCGCTTGTCCAGC 59.864 57.895 0.00 0.00 46.31 4.85
4391 6426 2.351455 GCTTCTGGCTTCTGAACTACC 58.649 52.381 0.00 0.00 38.06 3.18
4392 6427 2.027653 GCTTCTGGCTTCTGAACTACCT 60.028 50.000 0.00 0.00 38.06 3.08
4393 6428 3.594134 CTTCTGGCTTCTGAACTACCTG 58.406 50.000 0.00 0.00 0.00 4.00
4394 6429 1.902508 TCTGGCTTCTGAACTACCTGG 59.097 52.381 0.00 0.00 0.00 4.45
4395 6430 1.625818 CTGGCTTCTGAACTACCTGGT 59.374 52.381 4.05 4.05 0.00 4.00
4396 6431 2.832129 CTGGCTTCTGAACTACCTGGTA 59.168 50.000 6.36 6.36 0.00 3.25
4397 6432 3.450904 TGGCTTCTGAACTACCTGGTAT 58.549 45.455 7.07 0.00 0.00 2.73
4398 6433 3.197766 TGGCTTCTGAACTACCTGGTATG 59.802 47.826 7.07 4.57 0.00 2.39
4399 6434 3.197983 GGCTTCTGAACTACCTGGTATGT 59.802 47.826 7.07 5.19 0.00 2.29
4400 6435 4.184629 GCTTCTGAACTACCTGGTATGTG 58.815 47.826 7.07 0.00 0.00 3.21
4401 6436 4.081642 GCTTCTGAACTACCTGGTATGTGA 60.082 45.833 7.07 0.00 0.00 3.58
4402 6437 5.655488 CTTCTGAACTACCTGGTATGTGAG 58.345 45.833 7.07 0.00 0.00 3.51
4403 6438 4.673968 TCTGAACTACCTGGTATGTGAGT 58.326 43.478 7.07 0.00 0.00 3.41
4404 6439 5.823312 TCTGAACTACCTGGTATGTGAGTA 58.177 41.667 7.07 0.00 0.00 2.59
4405 6440 6.250711 TCTGAACTACCTGGTATGTGAGTAA 58.749 40.000 7.07 0.00 0.00 2.24
4406 6441 6.895756 TCTGAACTACCTGGTATGTGAGTAAT 59.104 38.462 7.07 0.00 0.00 1.89
4407 6442 7.068348 TCTGAACTACCTGGTATGTGAGTAATC 59.932 40.741 7.07 0.00 0.00 1.75
4408 6443 5.769484 ACTACCTGGTATGTGAGTAATCG 57.231 43.478 7.07 0.00 0.00 3.34
4409 6444 5.198965 ACTACCTGGTATGTGAGTAATCGT 58.801 41.667 7.07 0.00 0.00 3.73
4410 6445 4.386867 ACCTGGTATGTGAGTAATCGTG 57.613 45.455 0.00 0.00 0.00 4.35
4411 6446 4.021229 ACCTGGTATGTGAGTAATCGTGA 58.979 43.478 0.00 0.00 0.00 4.35
4412 6447 4.649674 ACCTGGTATGTGAGTAATCGTGAT 59.350 41.667 0.00 0.00 0.00 3.06
4413 6448 5.221263 ACCTGGTATGTGAGTAATCGTGATC 60.221 44.000 0.00 0.00 0.00 2.92
4414 6449 5.221244 CCTGGTATGTGAGTAATCGTGATCA 60.221 44.000 0.00 0.00 0.00 2.92
4415 6450 6.215495 TGGTATGTGAGTAATCGTGATCAA 57.785 37.500 0.00 0.00 0.00 2.57
4416 6451 6.273071 TGGTATGTGAGTAATCGTGATCAAG 58.727 40.000 0.00 0.00 0.00 3.02
4417 6452 5.692204 GGTATGTGAGTAATCGTGATCAAGG 59.308 44.000 8.84 0.00 0.00 3.61
4418 6453 3.521560 TGTGAGTAATCGTGATCAAGGC 58.478 45.455 8.84 0.00 0.00 4.35
4419 6454 2.535984 GTGAGTAATCGTGATCAAGGCG 59.464 50.000 8.84 3.34 0.00 5.52
4420 6455 2.165641 TGAGTAATCGTGATCAAGGCGT 59.834 45.455 8.84 0.00 0.00 5.68
4421 6456 3.379057 TGAGTAATCGTGATCAAGGCGTA 59.621 43.478 8.84 0.00 0.00 4.42
4422 6457 3.966154 AGTAATCGTGATCAAGGCGTAG 58.034 45.455 8.84 0.00 0.00 3.51
4444 6479 3.532896 TCTGATGGCGGACAAGAAC 57.467 52.632 0.00 0.00 0.00 3.01
4445 6480 0.976641 TCTGATGGCGGACAAGAACT 59.023 50.000 0.00 0.00 0.00 3.01
4446 6481 1.081892 CTGATGGCGGACAAGAACTG 58.918 55.000 0.00 0.00 0.00 3.16
4447 6482 0.684535 TGATGGCGGACAAGAACTGA 59.315 50.000 0.00 0.00 0.00 3.41
4448 6483 1.071542 TGATGGCGGACAAGAACTGAA 59.928 47.619 0.00 0.00 0.00 3.02
4449 6484 1.464997 GATGGCGGACAAGAACTGAAC 59.535 52.381 0.00 0.00 0.00 3.18
4450 6485 0.878523 TGGCGGACAAGAACTGAACG 60.879 55.000 0.00 0.00 0.00 3.95
4451 6486 1.566018 GGCGGACAAGAACTGAACGG 61.566 60.000 0.00 0.00 0.00 4.44
4452 6487 0.878961 GCGGACAAGAACTGAACGGT 60.879 55.000 0.00 0.00 0.00 4.83
4453 6488 0.859232 CGGACAAGAACTGAACGGTG 59.141 55.000 0.00 0.00 0.00 4.94
4454 6489 1.226746 GGACAAGAACTGAACGGTGG 58.773 55.000 0.00 0.00 0.00 4.61
4455 6490 1.202604 GGACAAGAACTGAACGGTGGA 60.203 52.381 0.00 0.00 0.00 4.02
4456 6491 2.550208 GGACAAGAACTGAACGGTGGAT 60.550 50.000 0.00 0.00 0.00 3.41
4457 6492 2.480419 GACAAGAACTGAACGGTGGATG 59.520 50.000 0.00 0.00 0.00 3.51
4458 6493 1.197721 CAAGAACTGAACGGTGGATGC 59.802 52.381 0.00 0.00 0.00 3.91
4459 6494 0.670546 AGAACTGAACGGTGGATGCG 60.671 55.000 0.00 0.00 0.00 4.73
4460 6495 0.669318 GAACTGAACGGTGGATGCGA 60.669 55.000 0.00 0.00 0.00 5.10
4461 6496 0.670546 AACTGAACGGTGGATGCGAG 60.671 55.000 0.00 0.00 0.00 5.03
4462 6497 1.811266 CTGAACGGTGGATGCGAGG 60.811 63.158 0.00 0.00 0.00 4.63
4463 6498 2.511600 GAACGGTGGATGCGAGGG 60.512 66.667 0.00 0.00 0.00 4.30
4464 6499 3.310860 GAACGGTGGATGCGAGGGT 62.311 63.158 0.00 0.00 0.00 4.34
4465 6500 3.605749 AACGGTGGATGCGAGGGTG 62.606 63.158 0.00 0.00 0.00 4.61
4466 6501 3.770040 CGGTGGATGCGAGGGTGA 61.770 66.667 0.00 0.00 0.00 4.02
4467 6502 2.187946 GGTGGATGCGAGGGTGAG 59.812 66.667 0.00 0.00 0.00 3.51
4468 6503 2.660064 GGTGGATGCGAGGGTGAGT 61.660 63.158 0.00 0.00 0.00 3.41
4469 6504 1.153549 GTGGATGCGAGGGTGAGTC 60.154 63.158 0.00 0.00 0.00 3.36
4470 6505 1.609210 TGGATGCGAGGGTGAGTCA 60.609 57.895 0.00 0.00 0.00 3.41
4471 6506 1.142748 GGATGCGAGGGTGAGTCAG 59.857 63.158 0.00 0.00 0.00 3.51
4472 6507 1.608717 GGATGCGAGGGTGAGTCAGT 61.609 60.000 0.00 0.00 0.00 3.41
4473 6508 0.459237 GATGCGAGGGTGAGTCAGTG 60.459 60.000 0.00 0.00 0.00 3.66
4474 6509 2.433318 GCGAGGGTGAGTCAGTGC 60.433 66.667 0.00 0.00 0.00 4.40
4475 6510 2.262915 CGAGGGTGAGTCAGTGCC 59.737 66.667 0.00 0.00 0.00 5.01
4476 6511 2.665603 GAGGGTGAGTCAGTGCCC 59.334 66.667 8.92 8.92 41.36 5.36
4477 6512 2.930562 AGGGTGAGTCAGTGCCCC 60.931 66.667 12.60 10.48 41.99 5.80
4478 6513 4.035102 GGGTGAGTCAGTGCCCCC 62.035 72.222 6.08 3.24 35.18 5.40
4479 6514 4.394712 GGTGAGTCAGTGCCCCCG 62.395 72.222 0.00 0.00 0.00 5.73
4480 6515 3.626924 GTGAGTCAGTGCCCCCGT 61.627 66.667 0.00 0.00 0.00 5.28
4481 6516 3.625897 TGAGTCAGTGCCCCCGTG 61.626 66.667 0.00 0.00 0.00 4.94
4482 6517 4.394712 GAGTCAGTGCCCCCGTGG 62.395 72.222 0.00 0.00 37.09 4.94
4484 6519 4.265056 GTCAGTGCCCCCGTGGTT 62.265 66.667 0.00 0.00 36.04 3.67
4485 6520 2.527123 TCAGTGCCCCCGTGGTTA 60.527 61.111 0.00 0.00 36.04 2.85
4486 6521 2.359478 CAGTGCCCCCGTGGTTAC 60.359 66.667 0.00 0.00 36.04 2.50
4487 6522 3.643554 AGTGCCCCCGTGGTTACC 61.644 66.667 0.00 0.00 36.04 2.85
4488 6523 4.728110 GTGCCCCCGTGGTTACCC 62.728 72.222 0.00 0.00 36.04 3.69
4490 6525 3.969119 GCCCCCGTGGTTACCCAA 61.969 66.667 0.00 0.00 44.15 4.12
4491 6526 3.092624 CCCCCGTGGTTACCCAAT 58.907 61.111 0.00 0.00 44.15 3.16
4492 6527 1.379309 CCCCCGTGGTTACCCAATG 60.379 63.158 0.00 0.00 44.15 2.82
4493 6528 1.686416 CCCCGTGGTTACCCAATGA 59.314 57.895 0.00 0.00 44.15 2.57
4494 6529 0.257616 CCCCGTGGTTACCCAATGAT 59.742 55.000 0.00 0.00 44.15 2.45
4495 6530 1.341581 CCCCGTGGTTACCCAATGATT 60.342 52.381 0.00 0.00 44.15 2.57
4496 6531 2.092321 CCCCGTGGTTACCCAATGATTA 60.092 50.000 0.00 0.00 44.15 1.75
4497 6532 2.946990 CCCGTGGTTACCCAATGATTAC 59.053 50.000 0.00 0.00 44.15 1.89
4498 6533 2.610374 CCGTGGTTACCCAATGATTACG 59.390 50.000 0.00 0.00 44.15 3.18
4499 6534 2.031191 CGTGGTTACCCAATGATTACGC 59.969 50.000 0.00 0.00 44.15 4.42
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 0.586319 ACACGCCGTGATTTCAGTTG 59.414 50.000 25.94 0.00 36.96 3.16
62 63 8.332464 CAGTCGCTAACGGAAATTAATCATTTA 58.668 33.333 0.00 0.00 40.63 1.40
64 65 6.315393 ACAGTCGCTAACGGAAATTAATCATT 59.685 34.615 0.00 0.00 40.63 2.57
81 82 7.602644 TGAATCTTCTTAATTAACACAGTCGCT 59.397 33.333 0.00 0.00 0.00 4.93
83 84 9.140286 TCTGAATCTTCTTAATTAACACAGTCG 57.860 33.333 0.00 0.00 0.00 4.18
143 154 8.441312 AAACGGAACAGACAAAAGATAAAGTA 57.559 30.769 0.00 0.00 0.00 2.24
152 163 8.180267 TCGTAAAAATAAACGGAACAGACAAAA 58.820 29.630 0.00 0.00 39.52 2.44
153 164 7.692088 TCGTAAAAATAAACGGAACAGACAAA 58.308 30.769 0.00 0.00 39.52 2.83
161 172 6.568271 GCTTTCCCTCGTAAAAATAAACGGAA 60.568 38.462 0.00 0.00 39.52 4.30
207 222 0.441533 CTAGTCAAAGCACAGCAGCG 59.558 55.000 0.00 0.00 40.15 5.18
271 288 2.922335 GCCAACACCTCGAATTTTCTGC 60.922 50.000 0.00 0.00 0.00 4.26
279 296 0.468226 AGAACAGCCAACACCTCGAA 59.532 50.000 0.00 0.00 0.00 3.71
310 331 3.807622 CAGTTTCGAGCTTGGTTCTGTAA 59.192 43.478 0.00 0.00 0.00 2.41
361 384 3.670898 AGGATCTTCCCTGCCTGAT 57.329 52.632 0.00 0.00 37.19 2.90
402 425 9.961265 ATGTTCGTCGAATAGAAGAAATATGTA 57.039 29.630 11.45 0.00 46.03 2.29
403 426 8.873215 ATGTTCGTCGAATAGAAGAAATATGT 57.127 30.769 11.45 0.00 46.03 2.29
404 427 9.573102 CAATGTTCGTCGAATAGAAGAAATATG 57.427 33.333 11.45 0.00 46.03 1.78
479 503 7.024768 CGAACTGAAACCTTTGTAAAAGACAA 58.975 34.615 1.31 0.00 46.56 3.18
490 515 6.020971 ACTGAAAAACGAACTGAAACCTTT 57.979 33.333 0.00 0.00 0.00 3.11
494 519 7.784790 TGTAAACTGAAAAACGAACTGAAAC 57.215 32.000 0.00 0.00 0.00 2.78
527 616 1.390123 CGTCTAGTGTTCGTGGCATTG 59.610 52.381 0.00 0.00 0.00 2.82
575 665 2.325583 TAGCTGGCTTGGGTAATTCG 57.674 50.000 0.00 0.00 0.00 3.34
608 698 7.042051 TGCGGCAGTTAATTTTAGATCACTATC 60.042 37.037 0.00 0.00 0.00 2.08
613 703 4.095782 GGTGCGGCAGTTAATTTTAGATCA 59.904 41.667 1.18 0.00 0.00 2.92
644 734 2.379972 AGCAATCTACTCGCAGGTACT 58.620 47.619 0.00 0.00 43.88 2.73
645 735 2.873133 AGCAATCTACTCGCAGGTAC 57.127 50.000 0.00 0.00 0.00 3.34
646 736 4.994907 TTAAGCAATCTACTCGCAGGTA 57.005 40.909 0.00 0.00 0.00 3.08
730 881 3.376546 GCTGTGGCTTCTTTCCTAATGAG 59.623 47.826 0.00 0.00 35.22 2.90
767 919 5.369409 AGCAGGAAGAGAATCAATCATGA 57.631 39.130 0.00 0.00 37.23 3.07
805 958 9.515226 AATTTGCTATAGAGGTCTTAACAAACA 57.485 29.630 3.21 0.00 0.00 2.83
846 1017 2.028130 ACTCGACCTAGCATTCTGAGG 58.972 52.381 0.00 0.00 36.36 3.86
1278 1476 1.900486 GAGGTGTTGTAGCAGTACCCT 59.100 52.381 0.00 0.00 31.80 4.34
1589 1787 2.230660 GGTTGAACTCCCAGGTTTCAG 58.769 52.381 0.00 0.00 0.00 3.02
1595 1793 0.179029 ACAACGGTTGAACTCCCAGG 60.179 55.000 26.39 0.00 0.00 4.45
1927 2125 5.458041 TTATGGGCGTTAGTACATACTCC 57.542 43.478 0.00 0.00 37.73 3.85
1928 2126 7.031975 GGTATTATGGGCGTTAGTACATACTC 58.968 42.308 0.00 0.00 37.73 2.59
1929 2127 6.349611 CGGTATTATGGGCGTTAGTACATACT 60.350 42.308 0.00 0.00 40.24 2.12
1930 2128 5.801947 CGGTATTATGGGCGTTAGTACATAC 59.198 44.000 0.00 0.00 0.00 2.39
1931 2129 5.622007 GCGGTATTATGGGCGTTAGTACATA 60.622 44.000 0.00 0.00 0.00 2.29
1932 2130 4.813027 CGGTATTATGGGCGTTAGTACAT 58.187 43.478 0.00 0.00 0.00 2.29
1935 2133 2.627221 TGCGGTATTATGGGCGTTAGTA 59.373 45.455 0.00 0.00 0.00 1.82
1967 2165 4.963628 AGTAAGTGAGATAAAGGGACCTCC 59.036 45.833 0.00 0.00 0.00 4.30
2350 2618 1.620822 AGGCCGAATATTCCCATTGC 58.379 50.000 9.87 5.23 0.00 3.56
2431 2700 7.703328 TGAAAGTACTCCTGCTTAACTTTTTG 58.297 34.615 0.00 0.00 39.72 2.44
2451 2720 2.054232 AGCCTCCATGCTGATGAAAG 57.946 50.000 0.00 0.00 40.90 2.62
2502 2771 6.454795 TGAAAATACATTGAAAGCAAGACCC 58.545 36.000 0.00 0.00 37.45 4.46
2896 3171 2.615391 TGGGGGAGACGCATATGAATA 58.385 47.619 6.97 0.00 46.93 1.75
2955 3230 6.650807 ACACTTTGGCCATATAGTTATCATCG 59.349 38.462 6.09 0.00 0.00 3.84
3099 3374 2.353889 TCCGAAGCTGTATACGTCACTC 59.646 50.000 0.00 0.00 0.00 3.51
3249 3524 2.545952 GCTCTCTTGACCTTTCACGTGA 60.546 50.000 15.76 15.76 0.00 4.35
3563 3838 5.385628 AGTAAGACGGAGGGAGTAATAGT 57.614 43.478 0.00 0.00 0.00 2.12
3570 3845 5.651576 ACTAACTTTAGTAAGACGGAGGGAG 59.348 44.000 0.00 0.00 41.92 4.30
3571 3846 5.574188 ACTAACTTTAGTAAGACGGAGGGA 58.426 41.667 0.00 0.00 41.92 4.20
3574 3849 9.683069 TTTTGTACTAACTTTAGTAAGACGGAG 57.317 33.333 9.88 0.00 45.03 4.63
3592 3867 9.965824 CCAAAATAAGTGACTCAATTTTGTACT 57.034 29.630 26.81 6.87 43.14 2.73
3593 3868 9.191995 CCCAAAATAAGTGACTCAATTTTGTAC 57.808 33.333 26.81 0.00 43.14 2.90
3594 3869 9.137459 TCCCAAAATAAGTGACTCAATTTTGTA 57.863 29.630 26.81 18.89 43.14 2.41
3595 3870 8.017418 TCCCAAAATAAGTGACTCAATTTTGT 57.983 30.769 26.81 7.84 43.14 2.83
3596 3871 8.928733 CATCCCAAAATAAGTGACTCAATTTTG 58.071 33.333 24.60 24.60 43.77 2.44
3597 3872 8.096414 CCATCCCAAAATAAGTGACTCAATTTT 58.904 33.333 10.89 10.89 33.07 1.82
3598 3873 7.454380 TCCATCCCAAAATAAGTGACTCAATTT 59.546 33.333 0.00 0.00 0.00 1.82
3599 3874 6.953520 TCCATCCCAAAATAAGTGACTCAATT 59.046 34.615 0.00 0.00 0.00 2.32
3600 3875 6.493166 TCCATCCCAAAATAAGTGACTCAAT 58.507 36.000 0.00 0.00 0.00 2.57
3601 3876 5.886609 TCCATCCCAAAATAAGTGACTCAA 58.113 37.500 0.00 0.00 0.00 3.02
3602 3877 5.500234 CTCCATCCCAAAATAAGTGACTCA 58.500 41.667 0.00 0.00 0.00 3.41
3603 3878 4.884164 CCTCCATCCCAAAATAAGTGACTC 59.116 45.833 0.00 0.00 0.00 3.36
3604 3879 4.325344 CCCTCCATCCCAAAATAAGTGACT 60.325 45.833 0.00 0.00 0.00 3.41
3605 3880 3.954258 CCCTCCATCCCAAAATAAGTGAC 59.046 47.826 0.00 0.00 0.00 3.67
3606 3881 3.855599 TCCCTCCATCCCAAAATAAGTGA 59.144 43.478 0.00 0.00 0.00 3.41
3607 3882 4.210331 CTCCCTCCATCCCAAAATAAGTG 58.790 47.826 0.00 0.00 0.00 3.16
3608 3883 3.858638 ACTCCCTCCATCCCAAAATAAGT 59.141 43.478 0.00 0.00 0.00 2.24
3609 3884 4.526438 ACTCCCTCCATCCCAAAATAAG 57.474 45.455 0.00 0.00 0.00 1.73
3610 3885 6.606241 AATACTCCCTCCATCCCAAAATAA 57.394 37.500 0.00 0.00 0.00 1.40
3611 3886 7.905144 ATAATACTCCCTCCATCCCAAAATA 57.095 36.000 0.00 0.00 0.00 1.40
3612 3887 6.803587 ATAATACTCCCTCCATCCCAAAAT 57.196 37.500 0.00 0.00 0.00 1.82
3613 3888 6.621931 TGTATAATACTCCCTCCATCCCAAAA 59.378 38.462 0.00 0.00 0.00 2.44
3614 3889 6.154645 TGTATAATACTCCCTCCATCCCAAA 58.845 40.000 0.00 0.00 0.00 3.28
3615 3890 5.733000 TGTATAATACTCCCTCCATCCCAA 58.267 41.667 0.00 0.00 0.00 4.12
3616 3891 5.363124 TGTATAATACTCCCTCCATCCCA 57.637 43.478 0.00 0.00 0.00 4.37
3617 3892 5.726793 ACATGTATAATACTCCCTCCATCCC 59.273 44.000 0.00 0.00 0.00 3.85
3618 3893 6.213600 ACACATGTATAATACTCCCTCCATCC 59.786 42.308 0.00 0.00 0.00 3.51
3619 3894 7.099764 CACACATGTATAATACTCCCTCCATC 58.900 42.308 0.00 0.00 0.00 3.51
3620 3895 6.558775 ACACACATGTATAATACTCCCTCCAT 59.441 38.462 0.00 0.00 37.26 3.41
3621 3896 5.903010 ACACACATGTATAATACTCCCTCCA 59.097 40.000 0.00 0.00 37.26 3.86
3622 3897 6.420913 ACACACATGTATAATACTCCCTCC 57.579 41.667 0.00 0.00 37.26 4.30
3623 3898 9.998106 ATTAACACACATGTATAATACTCCCTC 57.002 33.333 0.00 0.00 38.45 4.30
3624 3899 9.998106 GATTAACACACATGTATAATACTCCCT 57.002 33.333 0.00 0.00 38.45 4.20
3625 3900 9.998106 AGATTAACACACATGTATAATACTCCC 57.002 33.333 0.00 0.00 38.45 4.30
3655 3930 9.388506 CAGAAGGAACAATCTTCATGTAGTAAT 57.611 33.333 0.00 0.00 42.09 1.89
3656 3931 7.824289 CCAGAAGGAACAATCTTCATGTAGTAA 59.176 37.037 0.00 0.00 42.09 2.24
3705 3980 9.838339 ATGGTAAGAAGGTCTAGAATTAACATG 57.162 33.333 0.00 0.00 31.26 3.21
3718 3994 8.732746 AATATAACACACATGGTAAGAAGGTC 57.267 34.615 0.00 0.00 29.75 3.85
3736 4012 8.850156 AGGTACATGCAATCCTCAAAATATAAC 58.150 33.333 0.00 0.00 0.00 1.89
3739 4015 7.902920 AAGGTACATGCAATCCTCAAAATAT 57.097 32.000 0.00 0.00 0.00 1.28
3824 4101 4.208074 TGTTGTTTCACATCACACATCG 57.792 40.909 0.00 0.00 0.00 3.84
3826 4103 5.581126 ACTTGTTGTTTCACATCACACAT 57.419 34.783 0.00 0.00 28.51 3.21
3841 4118 4.806342 ACTGTAGCGGTAAAACTTGTTG 57.194 40.909 0.00 0.00 0.00 3.33
3843 4120 3.992427 GCTACTGTAGCGGTAAAACTTGT 59.008 43.478 22.60 0.00 42.62 3.16
3872 4149 2.418368 ATTGGTGGTGTCGCATACAT 57.582 45.000 0.00 0.00 41.10 2.29
3874 4151 1.467374 GCAATTGGTGGTGTCGCATAC 60.467 52.381 7.72 0.00 0.00 2.39
3875 4152 0.808125 GCAATTGGTGGTGTCGCATA 59.192 50.000 7.72 0.00 0.00 3.14
3877 4154 1.177895 ATGCAATTGGTGGTGTCGCA 61.178 50.000 7.72 0.00 0.00 5.10
3878 4155 0.808125 TATGCAATTGGTGGTGTCGC 59.192 50.000 7.72 0.00 0.00 5.19
3879 4156 2.945008 AGATATGCAATTGGTGGTGTCG 59.055 45.455 7.72 0.00 0.00 4.35
3880 4157 4.202441 AGAGATATGCAATTGGTGGTGTC 58.798 43.478 7.72 0.00 0.00 3.67
3881 4158 4.202441 GAGAGATATGCAATTGGTGGTGT 58.798 43.478 7.72 0.00 0.00 4.16
3882 4159 4.201657 TGAGAGATATGCAATTGGTGGTG 58.798 43.478 7.72 0.00 0.00 4.17
3884 4161 5.314529 AGATGAGAGATATGCAATTGGTGG 58.685 41.667 7.72 0.00 0.00 4.61
3885 4162 7.443272 TGTTAGATGAGAGATATGCAATTGGTG 59.557 37.037 7.72 0.00 0.00 4.17
3886 4163 7.512130 TGTTAGATGAGAGATATGCAATTGGT 58.488 34.615 7.72 0.00 0.00 3.67
3887 4164 7.974482 TGTTAGATGAGAGATATGCAATTGG 57.026 36.000 7.72 0.00 0.00 3.16
3893 4170 9.650539 ACAATGTATGTTAGATGAGAGATATGC 57.349 33.333 0.00 0.00 40.06 3.14
3927 4204 8.742777 AGATACTCTTGCATAATTTTTCTTGCA 58.257 29.630 0.00 0.00 42.90 4.08
3928 4205 9.017669 CAGATACTCTTGCATAATTTTTCTTGC 57.982 33.333 0.00 0.00 35.67 4.01
3929 4206 9.017669 GCAGATACTCTTGCATAATTTTTCTTG 57.982 33.333 0.00 0.00 0.00 3.02
3930 4207 8.193438 GGCAGATACTCTTGCATAATTTTTCTT 58.807 33.333 0.00 0.00 0.00 2.52
3932 4209 7.710896 AGGCAGATACTCTTGCATAATTTTTC 58.289 34.615 0.00 0.00 0.00 2.29
3933 4210 7.651027 AGGCAGATACTCTTGCATAATTTTT 57.349 32.000 0.00 0.00 0.00 1.94
3936 4213 7.486647 CAAAAGGCAGATACTCTTGCATAATT 58.513 34.615 0.00 0.00 0.00 1.40
3939 4216 4.336433 GCAAAAGGCAGATACTCTTGCATA 59.664 41.667 0.00 0.00 43.97 3.14
3940 4217 3.129988 GCAAAAGGCAGATACTCTTGCAT 59.870 43.478 0.00 0.00 43.97 3.96
3941 4218 2.489329 GCAAAAGGCAGATACTCTTGCA 59.511 45.455 0.00 0.00 43.97 4.08
3942 4219 3.142404 GCAAAAGGCAGATACTCTTGC 57.858 47.619 0.00 0.00 43.97 4.01
3956 4233 9.528018 TCTTCTTACAAAATTTACCTGCAAAAG 57.472 29.630 0.00 0.00 0.00 2.27
3967 4244 9.612066 TGCTTCCAAAATCTTCTTACAAAATTT 57.388 25.926 0.00 0.00 0.00 1.82
3968 4245 9.612066 TTGCTTCCAAAATCTTCTTACAAAATT 57.388 25.926 0.00 0.00 0.00 1.82
3969 4246 9.612066 TTTGCTTCCAAAATCTTCTTACAAAAT 57.388 25.926 0.00 0.00 37.97 1.82
3972 4249 9.612066 AAATTTGCTTCCAAAATCTTCTTACAA 57.388 25.926 0.00 0.00 43.58 2.41
3974 4251 9.868389 CAAAATTTGCTTCCAAAATCTTCTTAC 57.132 29.630 0.00 0.00 43.58 2.34
3992 4269 5.317859 GCAATTTTGGCTTGCAAAATTTG 57.682 34.783 17.13 18.31 44.79 2.32
4001 4278 1.072015 TCCCCTTGCAATTTTGGCTTG 59.928 47.619 0.00 0.00 0.00 4.01
4002 4279 1.072173 GTCCCCTTGCAATTTTGGCTT 59.928 47.619 0.00 0.00 0.00 4.35
4003 4280 0.686789 GTCCCCTTGCAATTTTGGCT 59.313 50.000 0.00 0.00 0.00 4.75
4004 4281 0.321564 GGTCCCCTTGCAATTTTGGC 60.322 55.000 0.00 0.00 0.00 4.52
4005 4282 0.324614 GGGTCCCCTTGCAATTTTGG 59.675 55.000 0.00 0.00 0.00 3.28
4006 4283 0.037419 CGGGTCCCCTTGCAATTTTG 60.037 55.000 0.00 0.00 0.00 2.44
4007 4284 1.826340 GCGGGTCCCCTTGCAATTTT 61.826 55.000 0.00 0.00 0.00 1.82
4008 4285 2.282783 GCGGGTCCCCTTGCAATTT 61.283 57.895 0.00 0.00 0.00 1.82
4009 4286 2.679996 GCGGGTCCCCTTGCAATT 60.680 61.111 0.00 0.00 0.00 2.32
4014 4291 4.016706 AAGACGCGGGTCCCCTTG 62.017 66.667 26.94 0.00 44.54 3.61
4015 4292 4.016706 CAAGACGCGGGTCCCCTT 62.017 66.667 26.94 13.61 44.54 3.95
4025 4302 2.091122 GCAAAATTAAGCAGCAAGACGC 59.909 45.455 0.00 0.00 42.91 5.19
4026 4303 3.307674 TGCAAAATTAAGCAGCAAGACG 58.692 40.909 0.00 0.00 35.51 4.18
4030 4307 6.674694 TTTTCTTGCAAAATTAAGCAGCAA 57.325 29.167 0.00 0.00 42.39 3.91
4031 4308 6.674694 TTTTTCTTGCAAAATTAAGCAGCA 57.325 29.167 0.00 0.00 42.39 4.41
4032 4309 9.269415 CATATTTTTCTTGCAAAATTAAGCAGC 57.731 29.630 0.00 0.00 42.39 5.25
4085 5045 8.827832 ATATGGCATGGTTTGTGCTATAATAT 57.172 30.769 10.98 1.36 45.15 1.28
4086 5046 8.648698 AATATGGCATGGTTTGTGCTATAATA 57.351 30.769 10.98 0.00 45.15 0.98
4088 5048 6.975196 AATATGGCATGGTTTGTGCTATAA 57.025 33.333 10.98 0.00 45.15 0.98
4089 5049 7.887495 TGATAATATGGCATGGTTTGTGCTATA 59.113 33.333 10.98 6.63 45.75 1.31
4091 5051 6.016360 GTGATAATATGGCATGGTTTGTGCTA 60.016 38.462 10.98 0.00 42.16 3.49
4093 5053 4.984161 GTGATAATATGGCATGGTTTGTGC 59.016 41.667 10.98 0.00 41.78 4.57
4094 5054 5.214417 CGTGATAATATGGCATGGTTTGTG 58.786 41.667 10.98 0.00 0.00 3.33
4097 5057 3.058293 CGCGTGATAATATGGCATGGTTT 60.058 43.478 10.98 3.93 0.00 3.27
4100 5060 2.345876 TCGCGTGATAATATGGCATGG 58.654 47.619 10.98 0.00 0.00 3.66
4102 5062 2.742053 GGTTCGCGTGATAATATGGCAT 59.258 45.455 5.77 4.88 0.00 4.40
4103 5063 2.139917 GGTTCGCGTGATAATATGGCA 58.860 47.619 5.77 0.00 0.00 4.92
4105 5065 5.867174 TCTTATGGTTCGCGTGATAATATGG 59.133 40.000 5.77 0.00 0.00 2.74
4106 5066 6.944557 TCTTATGGTTCGCGTGATAATATG 57.055 37.500 5.77 1.80 0.00 1.78
4107 5067 7.956420 TTTCTTATGGTTCGCGTGATAATAT 57.044 32.000 5.77 0.00 0.00 1.28
4108 5068 7.773864 TTTTCTTATGGTTCGCGTGATAATA 57.226 32.000 5.77 0.00 0.00 0.98
4110 5070 6.308675 GTTTTTCTTATGGTTCGCGTGATAA 58.691 36.000 5.77 4.10 0.00 1.75
4111 5071 5.163834 GGTTTTTCTTATGGTTCGCGTGATA 60.164 40.000 5.77 0.00 0.00 2.15
4112 5072 4.379082 GGTTTTTCTTATGGTTCGCGTGAT 60.379 41.667 5.77 0.00 0.00 3.06
4114 5074 3.058501 AGGTTTTTCTTATGGTTCGCGTG 60.059 43.478 5.77 0.00 0.00 5.34
4115 5075 3.143728 AGGTTTTTCTTATGGTTCGCGT 58.856 40.909 5.77 0.00 0.00 6.01
4116 5076 3.824414 AGGTTTTTCTTATGGTTCGCG 57.176 42.857 0.00 0.00 0.00 5.87
4117 5077 5.286438 ACAAAGGTTTTTCTTATGGTTCGC 58.714 37.500 0.00 0.00 0.00 4.70
4118 5078 6.500041 TGACAAAGGTTTTTCTTATGGTTCG 58.500 36.000 0.00 0.00 0.00 3.95
4119 5079 8.764287 CAATGACAAAGGTTTTTCTTATGGTTC 58.236 33.333 0.00 0.00 0.00 3.62
4120 5080 7.226523 GCAATGACAAAGGTTTTTCTTATGGTT 59.773 33.333 0.00 0.00 0.00 3.67
4121 5081 6.705825 GCAATGACAAAGGTTTTTCTTATGGT 59.294 34.615 0.00 0.00 0.00 3.55
4124 5084 6.744112 TCGCAATGACAAAGGTTTTTCTTAT 58.256 32.000 0.00 0.00 0.00 1.73
4126 5086 5.004922 TCGCAATGACAAAGGTTTTTCTT 57.995 34.783 0.00 0.00 0.00 2.52
4127 5087 4.647424 TCGCAATGACAAAGGTTTTTCT 57.353 36.364 0.00 0.00 0.00 2.52
4128 5088 6.149633 ACTATCGCAATGACAAAGGTTTTTC 58.850 36.000 0.00 0.00 0.00 2.29
4129 5089 6.084326 ACTATCGCAATGACAAAGGTTTTT 57.916 33.333 0.00 0.00 0.00 1.94
4133 5093 5.918608 AGATACTATCGCAATGACAAAGGT 58.081 37.500 0.00 0.00 0.00 3.50
4134 5094 6.851222 AAGATACTATCGCAATGACAAAGG 57.149 37.500 0.00 0.00 0.00 3.11
4135 5095 9.214953 GAAAAAGATACTATCGCAATGACAAAG 57.785 33.333 0.00 0.00 0.00 2.77
4136 5096 8.946085 AGAAAAAGATACTATCGCAATGACAAA 58.054 29.630 0.00 0.00 0.00 2.83
4137 5097 8.492673 AGAAAAAGATACTATCGCAATGACAA 57.507 30.769 0.00 0.00 0.00 3.18
4138 5098 8.492673 AAGAAAAAGATACTATCGCAATGACA 57.507 30.769 0.00 0.00 0.00 3.58
4139 5099 8.821894 AGAAGAAAAAGATACTATCGCAATGAC 58.178 33.333 0.00 0.00 0.00 3.06
4140 5100 8.948631 AGAAGAAAAAGATACTATCGCAATGA 57.051 30.769 0.00 0.00 0.00 2.57
4142 5102 9.167311 ACAAGAAGAAAAAGATACTATCGCAAT 57.833 29.630 0.00 0.00 0.00 3.56
4143 5103 8.547967 ACAAGAAGAAAAAGATACTATCGCAA 57.452 30.769 0.00 0.00 0.00 4.85
4144 5104 8.547967 AACAAGAAGAAAAAGATACTATCGCA 57.452 30.769 0.00 0.00 0.00 5.10
4145 5105 9.827411 AAAACAAGAAGAAAAAGATACTATCGC 57.173 29.630 0.00 0.00 0.00 4.58
4178 5638 6.595716 ACTTACGGGAAGAAGATGAAAATGAG 59.404 38.462 7.04 0.00 38.65 2.90
4182 5642 6.761312 TGTACTTACGGGAAGAAGATGAAAA 58.239 36.000 7.04 0.00 38.65 2.29
4183 5643 6.014840 ACTGTACTTACGGGAAGAAGATGAAA 60.015 38.462 7.04 0.00 38.65 2.69
4186 5646 5.326200 ACTGTACTTACGGGAAGAAGATG 57.674 43.478 7.04 0.00 38.65 2.90
4187 5647 5.067544 GCTACTGTACTTACGGGAAGAAGAT 59.932 44.000 7.04 0.00 38.65 2.40
4189 5649 4.398673 AGCTACTGTACTTACGGGAAGAAG 59.601 45.833 7.04 4.00 38.65 2.85
4192 5652 3.734293 GCAGCTACTGTACTTACGGGAAG 60.734 52.174 0.00 0.00 36.89 3.46
4193 5653 2.165030 GCAGCTACTGTACTTACGGGAA 59.835 50.000 0.00 0.00 36.89 3.97
4194 5654 1.747355 GCAGCTACTGTACTTACGGGA 59.253 52.381 0.00 0.00 36.89 5.14
4195 5655 1.749634 AGCAGCTACTGTACTTACGGG 59.250 52.381 0.00 0.00 36.89 5.28
4197 5657 3.374367 TGAGAGCAGCTACTGTACTTACG 59.626 47.826 0.00 0.00 33.43 3.18
4198 5658 4.439016 GGTGAGAGCAGCTACTGTACTTAC 60.439 50.000 0.00 0.00 39.38 2.34
4199 5659 3.695060 GGTGAGAGCAGCTACTGTACTTA 59.305 47.826 0.00 0.00 39.38 2.24
4201 5661 2.096248 GGTGAGAGCAGCTACTGTACT 58.904 52.381 0.00 0.00 39.38 2.73
4223 5683 5.307976 TCCTTCCTCATCTCTCTGTCAAAAA 59.692 40.000 0.00 0.00 0.00 1.94
4224 5684 4.840680 TCCTTCCTCATCTCTCTGTCAAAA 59.159 41.667 0.00 0.00 0.00 2.44
4225 5685 4.420206 TCCTTCCTCATCTCTCTGTCAAA 58.580 43.478 0.00 0.00 0.00 2.69
4226 5686 4.053009 TCCTTCCTCATCTCTCTGTCAA 57.947 45.455 0.00 0.00 0.00 3.18
4227 5687 3.746792 TCCTTCCTCATCTCTCTGTCA 57.253 47.619 0.00 0.00 0.00 3.58
4228 5688 3.253188 CGATCCTTCCTCATCTCTCTGTC 59.747 52.174 0.00 0.00 0.00 3.51
4231 5691 3.593442 ACGATCCTTCCTCATCTCTCT 57.407 47.619 0.00 0.00 0.00 3.10
4232 5692 4.394729 ACTACGATCCTTCCTCATCTCTC 58.605 47.826 0.00 0.00 0.00 3.20
4233 5693 4.447138 ACTACGATCCTTCCTCATCTCT 57.553 45.455 0.00 0.00 0.00 3.10
4236 5696 7.883217 TGTATTTACTACGATCCTTCCTCATC 58.117 38.462 0.00 0.00 32.61 2.92
4238 5698 7.649533 TTGTATTTACTACGATCCTTCCTCA 57.350 36.000 0.00 0.00 32.61 3.86
4239 5699 8.937634 TTTTGTATTTACTACGATCCTTCCTC 57.062 34.615 0.00 0.00 32.61 3.71
4240 5700 9.326413 CATTTTGTATTTACTACGATCCTTCCT 57.674 33.333 0.00 0.00 32.61 3.36
4241 5701 9.321562 TCATTTTGTATTTACTACGATCCTTCC 57.678 33.333 0.00 0.00 32.61 3.46
4243 5703 9.661563 TGTCATTTTGTATTTACTACGATCCTT 57.338 29.630 0.00 0.00 32.61 3.36
4244 5704 9.832445 ATGTCATTTTGTATTTACTACGATCCT 57.168 29.630 0.00 0.00 32.61 3.24
4246 5706 9.370126 GCATGTCATTTTGTATTTACTACGATC 57.630 33.333 0.00 0.00 32.61 3.69
4248 5708 7.063662 ACGCATGTCATTTTGTATTTACTACGA 59.936 33.333 0.00 0.00 32.61 3.43
4249 5709 7.161900 CACGCATGTCATTTTGTATTTACTACG 59.838 37.037 0.00 0.00 32.61 3.51
4250 5710 7.044966 GCACGCATGTCATTTTGTATTTACTAC 60.045 37.037 0.00 0.00 0.00 2.73
4251 5711 6.964370 GCACGCATGTCATTTTGTATTTACTA 59.036 34.615 0.00 0.00 0.00 1.82
4252 5712 5.799936 GCACGCATGTCATTTTGTATTTACT 59.200 36.000 0.00 0.00 0.00 2.24
4253 5713 5.570973 TGCACGCATGTCATTTTGTATTTAC 59.429 36.000 0.00 0.00 0.00 2.01
4265 6300 3.051479 CAGGCTGCACGCATGTCA 61.051 61.111 0.00 0.00 44.90 3.58
4298 6333 1.134310 TGGCTAGGACATGCACAGATG 60.134 52.381 0.00 0.00 0.00 2.90
4299 6334 1.206878 TGGCTAGGACATGCACAGAT 58.793 50.000 0.00 0.00 0.00 2.90
4300 6335 0.983467 TTGGCTAGGACATGCACAGA 59.017 50.000 0.00 0.00 0.00 3.41
4301 6336 1.741706 CTTTGGCTAGGACATGCACAG 59.258 52.381 0.00 0.00 0.00 3.66
4302 6337 1.073763 ACTTTGGCTAGGACATGCACA 59.926 47.619 0.00 0.00 0.00 4.57
4303 6338 1.826385 ACTTTGGCTAGGACATGCAC 58.174 50.000 0.00 0.00 0.00 4.57
4304 6339 3.931907 ATACTTTGGCTAGGACATGCA 57.068 42.857 0.00 0.00 0.00 3.96
4305 6340 3.243201 GCAATACTTTGGCTAGGACATGC 60.243 47.826 0.00 0.00 33.22 4.06
4306 6341 4.202441 AGCAATACTTTGGCTAGGACATG 58.798 43.478 0.00 0.00 33.22 3.21
4307 6342 4.080356 TGAGCAATACTTTGGCTAGGACAT 60.080 41.667 0.00 0.00 33.22 3.06
4308 6343 3.263170 TGAGCAATACTTTGGCTAGGACA 59.737 43.478 0.00 0.00 33.22 4.02
4309 6344 3.873910 TGAGCAATACTTTGGCTAGGAC 58.126 45.455 0.00 0.00 33.22 3.85
4310 6345 4.778213 ATGAGCAATACTTTGGCTAGGA 57.222 40.909 0.00 0.00 33.22 2.94
4311 6346 4.024556 CGAATGAGCAATACTTTGGCTAGG 60.025 45.833 0.00 0.00 33.22 3.02
4312 6347 4.553547 GCGAATGAGCAATACTTTGGCTAG 60.554 45.833 0.00 0.00 37.05 3.42
4313 6348 3.312421 GCGAATGAGCAATACTTTGGCTA 59.688 43.478 0.00 0.00 37.05 3.93
4314 6349 2.098117 GCGAATGAGCAATACTTTGGCT 59.902 45.455 0.00 0.00 37.05 4.75
4315 6350 2.098117 AGCGAATGAGCAATACTTTGGC 59.902 45.455 0.00 0.00 40.15 4.52
4316 6351 3.624861 AGAGCGAATGAGCAATACTTTGG 59.375 43.478 0.00 0.00 40.15 3.28
4317 6352 4.871993 AGAGCGAATGAGCAATACTTTG 57.128 40.909 0.00 0.00 40.15 2.77
4318 6353 4.437930 GCAAGAGCGAATGAGCAATACTTT 60.438 41.667 0.00 0.00 40.15 2.66
4319 6354 3.064545 GCAAGAGCGAATGAGCAATACTT 59.935 43.478 0.00 0.00 40.15 2.24
4320 6355 2.611292 GCAAGAGCGAATGAGCAATACT 59.389 45.455 0.00 0.00 40.15 2.12
4321 6356 2.979299 GCAAGAGCGAATGAGCAATAC 58.021 47.619 0.00 0.00 40.15 1.89
4348 6383 2.512885 GACAAGCGAATGCAGTGAATG 58.487 47.619 0.00 0.00 46.23 2.67
4349 6384 1.470098 GGACAAGCGAATGCAGTGAAT 59.530 47.619 0.00 0.00 46.23 2.57
4350 6385 0.874390 GGACAAGCGAATGCAGTGAA 59.126 50.000 0.00 0.00 46.23 3.18
4351 6386 0.250252 TGGACAAGCGAATGCAGTGA 60.250 50.000 0.00 0.00 46.23 3.41
4352 6387 0.167470 CTGGACAAGCGAATGCAGTG 59.833 55.000 0.00 0.00 46.23 3.66
4353 6388 1.580845 GCTGGACAAGCGAATGCAGT 61.581 55.000 0.00 0.00 43.45 4.40
4354 6389 1.136147 GCTGGACAAGCGAATGCAG 59.864 57.895 0.00 2.11 43.45 4.41
4355 6390 3.266964 GCTGGACAAGCGAATGCA 58.733 55.556 0.00 0.00 43.45 3.96
4371 6406 2.027653 AGGTAGTTCAGAAGCCAGAAGC 60.028 50.000 0.00 0.00 44.25 3.86
4372 6407 3.594134 CAGGTAGTTCAGAAGCCAGAAG 58.406 50.000 0.00 0.00 0.00 2.85
4373 6408 2.303022 CCAGGTAGTTCAGAAGCCAGAA 59.697 50.000 0.00 0.00 0.00 3.02
4374 6409 1.902508 CCAGGTAGTTCAGAAGCCAGA 59.097 52.381 0.00 0.00 0.00 3.86
4375 6410 1.625818 ACCAGGTAGTTCAGAAGCCAG 59.374 52.381 0.00 0.00 0.00 4.85
4376 6411 1.729586 ACCAGGTAGTTCAGAAGCCA 58.270 50.000 0.00 0.00 0.00 4.75
4377 6412 3.197983 ACATACCAGGTAGTTCAGAAGCC 59.802 47.826 5.31 0.00 0.00 4.35
4378 6413 4.081642 TCACATACCAGGTAGTTCAGAAGC 60.082 45.833 5.31 0.00 0.00 3.86
4379 6414 5.186021 ACTCACATACCAGGTAGTTCAGAAG 59.814 44.000 5.31 0.00 0.00 2.85
4380 6415 5.084519 ACTCACATACCAGGTAGTTCAGAA 58.915 41.667 5.31 0.00 0.00 3.02
4381 6416 4.673968 ACTCACATACCAGGTAGTTCAGA 58.326 43.478 5.31 0.00 0.00 3.27
4382 6417 6.525578 TTACTCACATACCAGGTAGTTCAG 57.474 41.667 5.31 1.63 0.00 3.02
4383 6418 6.183360 CGATTACTCACATACCAGGTAGTTCA 60.183 42.308 5.31 0.00 0.00 3.18
4384 6419 6.183360 ACGATTACTCACATACCAGGTAGTTC 60.183 42.308 5.31 0.00 0.00 3.01
4385 6420 5.655532 ACGATTACTCACATACCAGGTAGTT 59.344 40.000 5.31 0.00 0.00 2.24
4386 6421 5.067413 CACGATTACTCACATACCAGGTAGT 59.933 44.000 5.31 1.17 0.00 2.73
4387 6422 5.298527 TCACGATTACTCACATACCAGGTAG 59.701 44.000 5.31 0.30 0.00 3.18
4388 6423 5.195185 TCACGATTACTCACATACCAGGTA 58.805 41.667 0.39 0.39 0.00 3.08
4389 6424 4.021229 TCACGATTACTCACATACCAGGT 58.979 43.478 0.00 0.00 0.00 4.00
4390 6425 4.649088 TCACGATTACTCACATACCAGG 57.351 45.455 0.00 0.00 0.00 4.45
4391 6426 5.831997 TGATCACGATTACTCACATACCAG 58.168 41.667 0.00 0.00 0.00 4.00
4392 6427 5.845391 TGATCACGATTACTCACATACCA 57.155 39.130 0.00 0.00 0.00 3.25
4393 6428 5.692204 CCTTGATCACGATTACTCACATACC 59.308 44.000 0.00 0.00 0.00 2.73
4394 6429 5.175856 GCCTTGATCACGATTACTCACATAC 59.824 44.000 0.00 0.00 0.00 2.39
4395 6430 5.289595 GCCTTGATCACGATTACTCACATA 58.710 41.667 0.00 0.00 0.00 2.29
4396 6431 4.122776 GCCTTGATCACGATTACTCACAT 58.877 43.478 0.00 0.00 0.00 3.21
4397 6432 3.521560 GCCTTGATCACGATTACTCACA 58.478 45.455 0.00 0.00 0.00 3.58
4398 6433 2.535984 CGCCTTGATCACGATTACTCAC 59.464 50.000 0.00 0.00 0.00 3.51
4399 6434 2.165641 ACGCCTTGATCACGATTACTCA 59.834 45.455 10.77 0.00 0.00 3.41
4400 6435 2.810650 ACGCCTTGATCACGATTACTC 58.189 47.619 10.77 0.00 0.00 2.59
4401 6436 2.961526 ACGCCTTGATCACGATTACT 57.038 45.000 10.77 0.00 0.00 2.24
4402 6437 2.471743 GCTACGCCTTGATCACGATTAC 59.528 50.000 10.77 0.00 0.00 1.89
4403 6438 2.545113 GGCTACGCCTTGATCACGATTA 60.545 50.000 10.77 0.00 46.69 1.75
4404 6439 1.571919 GCTACGCCTTGATCACGATT 58.428 50.000 10.77 0.00 0.00 3.34
4405 6440 0.249489 GGCTACGCCTTGATCACGAT 60.249 55.000 10.77 0.00 46.69 3.73
4406 6441 1.141019 GGCTACGCCTTGATCACGA 59.859 57.895 10.77 0.00 46.69 4.35
4407 6442 3.706140 GGCTACGCCTTGATCACG 58.294 61.111 0.00 0.00 46.69 4.35
4416 6451 2.279517 CCATCAGACGGCTACGCC 60.280 66.667 0.00 0.00 46.75 5.68
4417 6452 2.962253 GCCATCAGACGGCTACGC 60.962 66.667 0.00 0.00 46.56 4.42
4424 6459 0.389817 TTCTTGTCCGCCATCAGACG 60.390 55.000 0.00 0.00 35.71 4.18
4425 6460 1.079503 GTTCTTGTCCGCCATCAGAC 58.920 55.000 0.00 0.00 0.00 3.51
4426 6461 0.976641 AGTTCTTGTCCGCCATCAGA 59.023 50.000 0.00 0.00 0.00 3.27
4427 6462 1.081892 CAGTTCTTGTCCGCCATCAG 58.918 55.000 0.00 0.00 0.00 2.90
4428 6463 0.684535 TCAGTTCTTGTCCGCCATCA 59.315 50.000 0.00 0.00 0.00 3.07
4429 6464 1.464997 GTTCAGTTCTTGTCCGCCATC 59.535 52.381 0.00 0.00 0.00 3.51
4430 6465 1.523758 GTTCAGTTCTTGTCCGCCAT 58.476 50.000 0.00 0.00 0.00 4.40
4431 6466 0.878523 CGTTCAGTTCTTGTCCGCCA 60.879 55.000 0.00 0.00 0.00 5.69
4432 6467 1.566018 CCGTTCAGTTCTTGTCCGCC 61.566 60.000 0.00 0.00 0.00 6.13
4433 6468 0.878961 ACCGTTCAGTTCTTGTCCGC 60.879 55.000 0.00 0.00 0.00 5.54
4434 6469 0.859232 CACCGTTCAGTTCTTGTCCG 59.141 55.000 0.00 0.00 0.00 4.79
4435 6470 1.202604 TCCACCGTTCAGTTCTTGTCC 60.203 52.381 0.00 0.00 0.00 4.02
4436 6471 2.234300 TCCACCGTTCAGTTCTTGTC 57.766 50.000 0.00 0.00 0.00 3.18
4437 6472 2.494059 CATCCACCGTTCAGTTCTTGT 58.506 47.619 0.00 0.00 0.00 3.16
4438 6473 1.197721 GCATCCACCGTTCAGTTCTTG 59.802 52.381 0.00 0.00 0.00 3.02
4439 6474 1.523758 GCATCCACCGTTCAGTTCTT 58.476 50.000 0.00 0.00 0.00 2.52
4440 6475 0.670546 CGCATCCACCGTTCAGTTCT 60.671 55.000 0.00 0.00 0.00 3.01
4441 6476 0.669318 TCGCATCCACCGTTCAGTTC 60.669 55.000 0.00 0.00 0.00 3.01
4442 6477 0.670546 CTCGCATCCACCGTTCAGTT 60.671 55.000 0.00 0.00 0.00 3.16
4443 6478 1.079819 CTCGCATCCACCGTTCAGT 60.080 57.895 0.00 0.00 0.00 3.41
4444 6479 1.811266 CCTCGCATCCACCGTTCAG 60.811 63.158 0.00 0.00 0.00 3.02
4445 6480 2.264480 CCTCGCATCCACCGTTCA 59.736 61.111 0.00 0.00 0.00 3.18
4446 6481 2.511600 CCCTCGCATCCACCGTTC 60.512 66.667 0.00 0.00 0.00 3.95
4447 6482 3.319198 ACCCTCGCATCCACCGTT 61.319 61.111 0.00 0.00 0.00 4.44
4448 6483 4.082523 CACCCTCGCATCCACCGT 62.083 66.667 0.00 0.00 0.00 4.83
4449 6484 3.723235 CTCACCCTCGCATCCACCG 62.723 68.421 0.00 0.00 0.00 4.94
4450 6485 2.187946 CTCACCCTCGCATCCACC 59.812 66.667 0.00 0.00 0.00 4.61
4451 6486 1.153549 GACTCACCCTCGCATCCAC 60.154 63.158 0.00 0.00 0.00 4.02
4452 6487 1.607801 CTGACTCACCCTCGCATCCA 61.608 60.000 0.00 0.00 0.00 3.41
4453 6488 1.142748 CTGACTCACCCTCGCATCC 59.857 63.158 0.00 0.00 0.00 3.51
4454 6489 0.459237 CACTGACTCACCCTCGCATC 60.459 60.000 0.00 0.00 0.00 3.91
4455 6490 1.593787 CACTGACTCACCCTCGCAT 59.406 57.895 0.00 0.00 0.00 4.73
4456 6491 3.051210 CACTGACTCACCCTCGCA 58.949 61.111 0.00 0.00 0.00 5.10
4457 6492 2.433318 GCACTGACTCACCCTCGC 60.433 66.667 0.00 0.00 0.00 5.03
4458 6493 2.262915 GGCACTGACTCACCCTCG 59.737 66.667 0.00 0.00 0.00 4.63
4459 6494 2.665603 GGGCACTGACTCACCCTC 59.334 66.667 0.00 0.00 39.42 4.30
4460 6495 2.930562 GGGGCACTGACTCACCCT 60.931 66.667 3.76 0.00 42.40 4.34
4461 6496 4.035102 GGGGGCACTGACTCACCC 62.035 72.222 0.00 0.00 42.01 4.61
4462 6497 4.394712 CGGGGGCACTGACTCACC 62.395 72.222 0.00 0.00 0.00 4.02
4463 6498 3.626924 ACGGGGGCACTGACTCAC 61.627 66.667 0.52 0.00 0.00 3.51
4464 6499 3.625897 CACGGGGGCACTGACTCA 61.626 66.667 0.52 0.00 0.00 3.41
4465 6500 4.394712 CCACGGGGGCACTGACTC 62.395 72.222 0.52 0.00 0.00 3.36
4467 6502 2.886134 TAACCACGGGGGCACTGAC 61.886 63.158 9.50 0.00 42.05 3.51
4468 6503 2.527123 TAACCACGGGGGCACTGA 60.527 61.111 9.50 0.00 42.05 3.41
4469 6504 2.359478 GTAACCACGGGGGCACTG 60.359 66.667 9.50 0.00 42.05 3.66
4470 6505 3.643554 GGTAACCACGGGGGCACT 61.644 66.667 9.50 0.00 42.05 4.40
4484 6519 8.240682 GCATAAATATTGCGTAATCATTGGGTA 58.759 33.333 0.69 0.00 0.00 3.69
4485 6520 7.039784 AGCATAAATATTGCGTAATCATTGGGT 60.040 33.333 0.69 0.44 44.82 4.51
4486 6521 7.315142 AGCATAAATATTGCGTAATCATTGGG 58.685 34.615 0.69 0.00 44.82 4.12
4487 6522 8.746922 AAGCATAAATATTGCGTAATCATTGG 57.253 30.769 0.69 0.00 44.82 3.16
4490 6525 9.541724 CGTAAAGCATAAATATTGCGTAATCAT 57.458 29.630 0.69 0.00 44.82 2.45
4491 6526 8.552865 ACGTAAAGCATAAATATTGCGTAATCA 58.447 29.630 0.69 0.00 44.82 2.57
4492 6527 8.928844 ACGTAAAGCATAAATATTGCGTAATC 57.071 30.769 0.69 0.00 44.82 1.75
4493 6528 9.377383 GAACGTAAAGCATAAATATTGCGTAAT 57.623 29.630 3.69 3.69 41.89 1.89
4494 6529 8.388853 TGAACGTAAAGCATAAATATTGCGTAA 58.611 29.630 0.00 0.00 41.89 3.18
4495 6530 7.907194 TGAACGTAAAGCATAAATATTGCGTA 58.093 30.769 0.00 0.00 41.89 4.42
4496 6531 6.777101 TGAACGTAAAGCATAAATATTGCGT 58.223 32.000 0.00 0.00 43.96 5.24
4497 6532 7.657846 TTGAACGTAAAGCATAAATATTGCG 57.342 32.000 0.00 0.00 44.82 4.85
4498 6533 9.670180 GTTTTGAACGTAAAGCATAAATATTGC 57.330 29.630 0.00 0.00 40.45 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.