Multiple sequence alignment - TraesCS2B01G395100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G395100 | chr2B | 100.000 | 3561 | 0 | 0 | 1 | 3561 | 560184637 | 560188197 | 0.000000e+00 | 6577.0 |
1 | TraesCS2B01G395100 | chr2B | 92.411 | 224 | 13 | 4 | 3234 | 3456 | 234630588 | 234630808 | 2.060000e-82 | 316.0 |
2 | TraesCS2B01G395100 | chr2A | 93.957 | 2350 | 109 | 19 | 912 | 3231 | 621035998 | 621038344 | 0.000000e+00 | 3522.0 |
3 | TraesCS2B01G395100 | chr2D | 93.119 | 2209 | 121 | 18 | 935 | 3120 | 477992136 | 477994336 | 0.000000e+00 | 3208.0 |
4 | TraesCS2B01G395100 | chr2D | 89.238 | 827 | 76 | 10 | 40 | 855 | 590028479 | 590029303 | 0.000000e+00 | 1022.0 |
5 | TraesCS2B01G395100 | chr2D | 93.304 | 224 | 12 | 3 | 3233 | 3455 | 526224763 | 526224542 | 9.530000e-86 | 327.0 |
6 | TraesCS2B01G395100 | chr2D | 91.556 | 225 | 18 | 1 | 3233 | 3457 | 558182227 | 558182004 | 3.450000e-80 | 309.0 |
7 | TraesCS2B01G395100 | chr2D | 88.776 | 98 | 11 | 0 | 3456 | 3553 | 179125587 | 179125684 | 1.740000e-23 | 121.0 |
8 | TraesCS2B01G395100 | chr2D | 87.879 | 99 | 12 | 0 | 3461 | 3559 | 111991162 | 111991260 | 2.250000e-22 | 117.0 |
9 | TraesCS2B01G395100 | chr2D | 97.561 | 41 | 1 | 0 | 878 | 918 | 477990460 | 477990500 | 1.770000e-08 | 71.3 |
10 | TraesCS2B01G395100 | chr5D | 89.123 | 855 | 73 | 9 | 42 | 879 | 423232011 | 423231160 | 0.000000e+00 | 1046.0 |
11 | TraesCS2B01G395100 | chr5D | 85.497 | 855 | 83 | 23 | 41 | 880 | 531470216 | 531469388 | 0.000000e+00 | 854.0 |
12 | TraesCS2B01G395100 | chr5D | 93.694 | 222 | 12 | 2 | 3234 | 3454 | 546011428 | 546011648 | 7.370000e-87 | 331.0 |
13 | TraesCS2B01G395100 | chr6D | 89.423 | 832 | 76 | 5 | 33 | 855 | 447066639 | 447067467 | 0.000000e+00 | 1038.0 |
14 | TraesCS2B01G395100 | chr7D | 89.372 | 828 | 69 | 14 | 41 | 855 | 478798824 | 478799645 | 0.000000e+00 | 1024.0 |
15 | TraesCS2B01G395100 | chr7D | 86.667 | 105 | 12 | 2 | 3456 | 3558 | 583449011 | 583448907 | 8.080000e-22 | 115.0 |
16 | TraesCS2B01G395100 | chr7B | 89.238 | 827 | 76 | 10 | 41 | 855 | 632802985 | 632802160 | 0.000000e+00 | 1022.0 |
17 | TraesCS2B01G395100 | chr3B | 90.556 | 773 | 71 | 2 | 41 | 811 | 256361288 | 256360516 | 0.000000e+00 | 1022.0 |
18 | TraesCS2B01G395100 | chr3B | 90.544 | 772 | 72 | 1 | 41 | 811 | 2342253 | 2343024 | 0.000000e+00 | 1020.0 |
19 | TraesCS2B01G395100 | chr3B | 90.360 | 778 | 69 | 5 | 38 | 811 | 824305056 | 824304281 | 0.000000e+00 | 1016.0 |
20 | TraesCS2B01G395100 | chr3B | 77.368 | 190 | 35 | 6 | 2108 | 2293 | 133385602 | 133385787 | 4.860000e-19 | 106.0 |
21 | TraesCS2B01G395100 | chr3B | 85.556 | 90 | 13 | 0 | 2108 | 2197 | 133000497 | 133000586 | 1.050000e-15 | 95.3 |
22 | TraesCS2B01G395100 | chr1B | 90.576 | 764 | 68 | 4 | 38 | 799 | 94009131 | 94009892 | 0.000000e+00 | 1009.0 |
23 | TraesCS2B01G395100 | chr1B | 89.109 | 101 | 11 | 0 | 3461 | 3561 | 252969621 | 252969521 | 3.730000e-25 | 126.0 |
24 | TraesCS2B01G395100 | chr3D | 88.688 | 831 | 82 | 9 | 35 | 855 | 528948082 | 528948910 | 0.000000e+00 | 1003.0 |
25 | TraesCS2B01G395100 | chr3D | 92.308 | 221 | 16 | 1 | 3232 | 3452 | 520444641 | 520444422 | 2.670000e-81 | 313.0 |
26 | TraesCS2B01G395100 | chr3D | 75.661 | 189 | 40 | 5 | 2108 | 2293 | 84885213 | 84885398 | 4.900000e-14 | 89.8 |
27 | TraesCS2B01G395100 | chrUn | 88.164 | 828 | 82 | 13 | 41 | 855 | 224616475 | 224617299 | 0.000000e+00 | 972.0 |
28 | TraesCS2B01G395100 | chrUn | 88.043 | 828 | 83 | 13 | 41 | 855 | 249625305 | 249626129 | 0.000000e+00 | 966.0 |
29 | TraesCS2B01G395100 | chrUn | 83.077 | 130 | 13 | 6 | 734 | 855 | 405746832 | 405746960 | 3.760000e-20 | 110.0 |
30 | TraesCS2B01G395100 | chr5B | 88.164 | 828 | 82 | 13 | 41 | 855 | 430191646 | 430190822 | 0.000000e+00 | 972.0 |
31 | TraesCS2B01G395100 | chr5B | 86.739 | 460 | 49 | 9 | 405 | 855 | 430094160 | 430093704 | 5.310000e-138 | 501.0 |
32 | TraesCS2B01G395100 | chr5B | 92.000 | 225 | 16 | 2 | 3232 | 3454 | 355402639 | 355402863 | 7.420000e-82 | 315.0 |
33 | TraesCS2B01G395100 | chr5B | 87.879 | 99 | 12 | 0 | 3455 | 3553 | 41501947 | 41502045 | 2.250000e-22 | 117.0 |
34 | TraesCS2B01G395100 | chr1D | 88.726 | 683 | 69 | 4 | 174 | 855 | 50711825 | 50712500 | 0.000000e+00 | 828.0 |
35 | TraesCS2B01G395100 | chr1D | 91.964 | 224 | 15 | 3 | 3232 | 3454 | 457209241 | 457209462 | 9.600000e-81 | 311.0 |
36 | TraesCS2B01G395100 | chr6B | 91.379 | 232 | 18 | 2 | 3232 | 3462 | 686179086 | 686178856 | 2.060000e-82 | 316.0 |
37 | TraesCS2B01G395100 | chr6B | 87.755 | 98 | 12 | 0 | 3456 | 3553 | 320423929 | 320423832 | 8.080000e-22 | 115.0 |
38 | TraesCS2B01G395100 | chr7A | 90.083 | 242 | 19 | 5 | 3228 | 3467 | 46891185 | 46891423 | 3.450000e-80 | 309.0 |
39 | TraesCS2B01G395100 | chr5A | 87.500 | 104 | 13 | 0 | 3456 | 3559 | 665670555 | 665670658 | 1.740000e-23 | 121.0 |
40 | TraesCS2B01G395100 | chr6A | 86.792 | 106 | 13 | 1 | 3456 | 3561 | 548713168 | 548713064 | 2.250000e-22 | 117.0 |
41 | TraesCS2B01G395100 | chr4D | 85.577 | 104 | 15 | 0 | 3456 | 3559 | 488925478 | 488925375 | 3.760000e-20 | 110.0 |
42 | TraesCS2B01G395100 | chr3A | 84.906 | 53 | 8 | 0 | 1884 | 1936 | 101608846 | 101608898 | 2.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G395100 | chr2B | 560184637 | 560188197 | 3560 | False | 6577.00 | 6577 | 100.000 | 1 | 3561 | 1 | chr2B.!!$F2 | 3560 |
1 | TraesCS2B01G395100 | chr2A | 621035998 | 621038344 | 2346 | False | 3522.00 | 3522 | 93.957 | 912 | 3231 | 1 | chr2A.!!$F1 | 2319 |
2 | TraesCS2B01G395100 | chr2D | 477990460 | 477994336 | 3876 | False | 1639.65 | 3208 | 95.340 | 878 | 3120 | 2 | chr2D.!!$F4 | 2242 |
3 | TraesCS2B01G395100 | chr2D | 590028479 | 590029303 | 824 | False | 1022.00 | 1022 | 89.238 | 40 | 855 | 1 | chr2D.!!$F3 | 815 |
4 | TraesCS2B01G395100 | chr5D | 423231160 | 423232011 | 851 | True | 1046.00 | 1046 | 89.123 | 42 | 879 | 1 | chr5D.!!$R1 | 837 |
5 | TraesCS2B01G395100 | chr5D | 531469388 | 531470216 | 828 | True | 854.00 | 854 | 85.497 | 41 | 880 | 1 | chr5D.!!$R2 | 839 |
6 | TraesCS2B01G395100 | chr6D | 447066639 | 447067467 | 828 | False | 1038.00 | 1038 | 89.423 | 33 | 855 | 1 | chr6D.!!$F1 | 822 |
7 | TraesCS2B01G395100 | chr7D | 478798824 | 478799645 | 821 | False | 1024.00 | 1024 | 89.372 | 41 | 855 | 1 | chr7D.!!$F1 | 814 |
8 | TraesCS2B01G395100 | chr7B | 632802160 | 632802985 | 825 | True | 1022.00 | 1022 | 89.238 | 41 | 855 | 1 | chr7B.!!$R1 | 814 |
9 | TraesCS2B01G395100 | chr3B | 256360516 | 256361288 | 772 | True | 1022.00 | 1022 | 90.556 | 41 | 811 | 1 | chr3B.!!$R1 | 770 |
10 | TraesCS2B01G395100 | chr3B | 2342253 | 2343024 | 771 | False | 1020.00 | 1020 | 90.544 | 41 | 811 | 1 | chr3B.!!$F1 | 770 |
11 | TraesCS2B01G395100 | chr3B | 824304281 | 824305056 | 775 | True | 1016.00 | 1016 | 90.360 | 38 | 811 | 1 | chr3B.!!$R2 | 773 |
12 | TraesCS2B01G395100 | chr1B | 94009131 | 94009892 | 761 | False | 1009.00 | 1009 | 90.576 | 38 | 799 | 1 | chr1B.!!$F1 | 761 |
13 | TraesCS2B01G395100 | chr3D | 528948082 | 528948910 | 828 | False | 1003.00 | 1003 | 88.688 | 35 | 855 | 1 | chr3D.!!$F2 | 820 |
14 | TraesCS2B01G395100 | chrUn | 224616475 | 224617299 | 824 | False | 972.00 | 972 | 88.164 | 41 | 855 | 1 | chrUn.!!$F1 | 814 |
15 | TraesCS2B01G395100 | chrUn | 249625305 | 249626129 | 824 | False | 966.00 | 966 | 88.043 | 41 | 855 | 1 | chrUn.!!$F2 | 814 |
16 | TraesCS2B01G395100 | chr5B | 430190822 | 430191646 | 824 | True | 972.00 | 972 | 88.164 | 41 | 855 | 1 | chr5B.!!$R2 | 814 |
17 | TraesCS2B01G395100 | chr1D | 50711825 | 50712500 | 675 | False | 828.00 | 828 | 88.726 | 174 | 855 | 1 | chr1D.!!$F1 | 681 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
383 | 387 | 0.038526 | CCCAACACGACTAAGACGCT | 60.039 | 55.0 | 0.00 | 0.00 | 0.00 | 5.07 | F |
647 | 652 | 0.755698 | TAGGACTGATGGCCTCGTCC | 60.756 | 60.0 | 22.87 | 22.87 | 42.72 | 4.79 | F |
2076 | 3724 | 0.108992 | TACATGAGAACACGGACGCC | 60.109 | 55.0 | 0.00 | 0.00 | 0.00 | 5.68 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1686 | 3334 | 0.179140 | GCTCTTGCAGACTCTCCTCG | 60.179 | 60.0 | 0.00 | 0.00 | 39.41 | 4.63 | R |
2263 | 3911 | 1.006825 | CCGAGCACGTTCACGATCAA | 61.007 | 55.0 | 6.60 | 0.00 | 43.02 | 2.57 | R |
3288 | 4964 | 0.036022 | TGAATGCCACGTGTCATCCA | 59.964 | 50.0 | 13.12 | 2.86 | 0.00 | 3.41 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 4.468095 | AATATAAATCAGCGCGTGGAAC | 57.532 | 40.909 | 8.43 | 0.00 | 0.00 | 3.62 |
22 | 23 | 2.024176 | ATAAATCAGCGCGTGGAACT | 57.976 | 45.000 | 8.43 | 0.00 | 31.75 | 3.01 |
23 | 24 | 1.803334 | TAAATCAGCGCGTGGAACTT | 58.197 | 45.000 | 8.43 | 6.54 | 31.75 | 2.66 |
24 | 25 | 0.951558 | AAATCAGCGCGTGGAACTTT | 59.048 | 45.000 | 8.43 | 1.65 | 31.75 | 2.66 |
25 | 26 | 1.803334 | AATCAGCGCGTGGAACTTTA | 58.197 | 45.000 | 8.43 | 0.00 | 31.75 | 1.85 |
26 | 27 | 1.803334 | ATCAGCGCGTGGAACTTTAA | 58.197 | 45.000 | 8.43 | 0.00 | 31.75 | 1.52 |
27 | 28 | 1.584175 | TCAGCGCGTGGAACTTTAAA | 58.416 | 45.000 | 8.43 | 0.00 | 31.75 | 1.52 |
28 | 29 | 1.262151 | TCAGCGCGTGGAACTTTAAAC | 59.738 | 47.619 | 8.43 | 0.00 | 31.75 | 2.01 |
29 | 30 | 1.263217 | CAGCGCGTGGAACTTTAAACT | 59.737 | 47.619 | 8.43 | 0.00 | 31.75 | 2.66 |
30 | 31 | 1.263217 | AGCGCGTGGAACTTTAAACTG | 59.737 | 47.619 | 8.43 | 0.00 | 31.75 | 3.16 |
31 | 32 | 1.670326 | CGCGTGGAACTTTAAACTGC | 58.330 | 50.000 | 0.00 | 0.00 | 31.75 | 4.40 |
32 | 33 | 1.263217 | CGCGTGGAACTTTAAACTGCT | 59.737 | 47.619 | 0.00 | 0.00 | 31.75 | 4.24 |
33 | 34 | 2.650608 | GCGTGGAACTTTAAACTGCTG | 58.349 | 47.619 | 0.00 | 0.00 | 31.75 | 4.41 |
34 | 35 | 2.650608 | CGTGGAACTTTAAACTGCTGC | 58.349 | 47.619 | 0.00 | 0.00 | 31.75 | 5.25 |
35 | 36 | 2.032799 | CGTGGAACTTTAAACTGCTGCA | 59.967 | 45.455 | 0.88 | 0.88 | 31.75 | 4.41 |
36 | 37 | 3.372060 | GTGGAACTTTAAACTGCTGCAC | 58.628 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
100 | 101 | 5.464965 | AAGAACAAAGTACAAGTCACGTG | 57.535 | 39.130 | 9.94 | 9.94 | 0.00 | 4.49 |
114 | 115 | 1.338655 | TCACGTGAAGACCGACATGAA | 59.661 | 47.619 | 17.62 | 0.00 | 0.00 | 2.57 |
141 | 142 | 7.992754 | AACTGAAAAGATAGCAGAACATCTT | 57.007 | 32.000 | 0.00 | 0.00 | 42.03 | 2.40 |
154 | 155 | 2.820059 | ACATCTTCGAGCTTGACACA | 57.180 | 45.000 | 2.11 | 0.00 | 0.00 | 3.72 |
321 | 325 | 1.790755 | CCGTTGAACGAATCAGACCA | 58.209 | 50.000 | 20.47 | 0.00 | 46.05 | 4.02 |
368 | 372 | 3.089838 | CCAGATCTGGCACCCCAA | 58.910 | 61.111 | 28.45 | 0.00 | 44.73 | 4.12 |
383 | 387 | 0.038526 | CCCAACACGACTAAGACGCT | 60.039 | 55.000 | 0.00 | 0.00 | 0.00 | 5.07 |
444 | 448 | 2.654912 | GCACACGTTCCGTCTTCCG | 61.655 | 63.158 | 0.00 | 0.00 | 38.32 | 4.30 |
573 | 577 | 4.457496 | CACCACGAGGATGCCGCT | 62.457 | 66.667 | 5.68 | 0.00 | 38.69 | 5.52 |
576 | 580 | 4.827087 | CACGAGGATGCCGCTGCT | 62.827 | 66.667 | 0.70 | 0.00 | 38.71 | 4.24 |
588 | 592 | 3.133464 | GCTGCTGCCACGCCATTA | 61.133 | 61.111 | 3.85 | 0.00 | 0.00 | 1.90 |
598 | 603 | 2.481795 | GCCACGCCATTATTGCTTGAAT | 60.482 | 45.455 | 0.00 | 0.00 | 30.19 | 2.57 |
647 | 652 | 0.755698 | TAGGACTGATGGCCTCGTCC | 60.756 | 60.000 | 22.87 | 22.87 | 42.72 | 4.79 |
649 | 654 | 2.362503 | ACTGATGGCCTCGTCCGA | 60.363 | 61.111 | 3.32 | 0.00 | 0.00 | 4.55 |
680 | 685 | 4.142403 | CCAAAGAATCTTTATTCAGCGCCA | 60.142 | 41.667 | 8.03 | 0.00 | 43.44 | 5.69 |
717 | 724 | 1.339929 | AGCCAAAACGATGAACAACCC | 59.660 | 47.619 | 0.00 | 0.00 | 0.00 | 4.11 |
746 | 753 | 9.650714 | AAACCTAAACTACAAGGGAGTAAAAAT | 57.349 | 29.630 | 0.00 | 0.00 | 37.18 | 1.82 |
753 | 760 | 7.112779 | ACTACAAGGGAGTAAAAATGATCCAG | 58.887 | 38.462 | 0.00 | 0.00 | 33.24 | 3.86 |
756 | 763 | 3.269381 | AGGGAGTAAAAATGATCCAGGCA | 59.731 | 43.478 | 0.00 | 0.00 | 33.24 | 4.75 |
767 | 774 | 1.995066 | TCCAGGCATGTGGATCCGT | 60.995 | 57.895 | 7.39 | 0.00 | 41.99 | 4.69 |
769 | 776 | 1.221566 | CAGGCATGTGGATCCGTCA | 59.778 | 57.895 | 7.39 | 9.53 | 0.00 | 4.35 |
775 | 782 | 0.914417 | ATGTGGATCCGTCAACCCCT | 60.914 | 55.000 | 7.39 | 0.00 | 0.00 | 4.79 |
780 | 787 | 1.123928 | GATCCGTCAACCCCTCTCAT | 58.876 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
851 | 868 | 2.361992 | TCTCCTGGCGTCGGCTAA | 60.362 | 61.111 | 20.29 | 4.42 | 39.81 | 3.09 |
854 | 871 | 4.530857 | CCTGGCGTCGGCTAAGGG | 62.531 | 72.222 | 20.29 | 12.25 | 38.52 | 3.95 |
929 | 1017 | 4.585955 | ACACATGGTATACCGAGATGAC | 57.414 | 45.455 | 21.59 | 0.00 | 39.43 | 3.06 |
972 | 2613 | 5.578005 | TCTTCGGCAGGCTATATATACAC | 57.422 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
1063 | 2711 | 4.617995 | CGCATCCTTGTAAGCATCCAAAAA | 60.618 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
1270 | 2918 | 1.379977 | TCTGCCGGAATCGAGGTCT | 60.380 | 57.895 | 5.05 | 0.00 | 39.00 | 3.85 |
1292 | 2940 | 4.276146 | GATCCCGTACCCGTCCGC | 62.276 | 72.222 | 0.00 | 0.00 | 0.00 | 5.54 |
1359 | 3007 | 4.722700 | CCCGACTTGGTGCCCAGG | 62.723 | 72.222 | 2.42 | 2.42 | 36.63 | 4.45 |
1417 | 3065 | 2.265739 | GGCACTGCCGACTCATGA | 59.734 | 61.111 | 3.73 | 0.00 | 39.62 | 3.07 |
1418 | 3066 | 1.375908 | GGCACTGCCGACTCATGAA | 60.376 | 57.895 | 3.73 | 0.00 | 39.62 | 2.57 |
1473 | 3121 | 4.539083 | TGCAACACGTGGGCGAGT | 62.539 | 61.111 | 21.57 | 0.00 | 43.29 | 4.18 |
1475 | 3123 | 2.279851 | CAACACGTGGGCGAGTGA | 60.280 | 61.111 | 21.57 | 0.00 | 40.78 | 3.41 |
1629 | 3277 | 4.162690 | GTCCTGCCGCCCTTCGAT | 62.163 | 66.667 | 0.00 | 0.00 | 41.67 | 3.59 |
1686 | 3334 | 1.381928 | TACCGTCCTGCTCCATCGAC | 61.382 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1770 | 3418 | 4.968197 | GAAGAACTCGAGCACGGT | 57.032 | 55.556 | 13.61 | 0.00 | 40.21 | 4.83 |
1841 | 3489 | 2.842462 | TGTCTCCCTGTGCCACGT | 60.842 | 61.111 | 0.00 | 0.00 | 0.00 | 4.49 |
1863 | 3511 | 1.102154 | CTGCTCTGGACGTCTCAGAT | 58.898 | 55.000 | 26.50 | 0.00 | 40.07 | 2.90 |
2061 | 3709 | 4.894784 | ACGATGTCAAGAAGTGGTTACAT | 58.105 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
2076 | 3724 | 0.108992 | TACATGAGAACACGGACGCC | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2169 | 3817 | 2.359850 | GTGGCGGGCTTCATGACA | 60.360 | 61.111 | 0.00 | 0.00 | 0.00 | 3.58 |
2263 | 3911 | 1.689273 | AGCAGTTCCTGAACGAGAAGT | 59.311 | 47.619 | 4.49 | 0.00 | 45.50 | 3.01 |
2309 | 3957 | 4.778415 | CTCCGTCGGCGTGACCAG | 62.778 | 72.222 | 9.28 | 0.00 | 45.23 | 4.00 |
2585 | 4233 | 1.533338 | GCTGCTTTCGCTCATTGATGG | 60.533 | 52.381 | 0.00 | 0.00 | 36.97 | 3.51 |
2589 | 4237 | 2.357009 | GCTTTCGCTCATTGATGGACAT | 59.643 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
2597 | 4245 | 3.499338 | TCATTGATGGACATATTGGGGC | 58.501 | 45.455 | 0.00 | 0.00 | 0.00 | 5.80 |
2611 | 4259 | 0.106268 | TGGGGCTGTTTCTTGCTTGA | 60.106 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2622 | 4270 | 5.535783 | TGTTTCTTGCTTGATTGGAAGATCA | 59.464 | 36.000 | 0.00 | 0.00 | 42.39 | 2.92 |
2633 | 4285 | 7.854557 | TGATTGGAAGATCAAGACTATGTTG | 57.145 | 36.000 | 0.00 | 0.00 | 33.31 | 3.33 |
2636 | 4288 | 5.559770 | TGGAAGATCAAGACTATGTTGCAA | 58.440 | 37.500 | 0.00 | 0.00 | 27.54 | 4.08 |
2637 | 4289 | 5.412594 | TGGAAGATCAAGACTATGTTGCAAC | 59.587 | 40.000 | 22.83 | 22.83 | 27.54 | 4.17 |
2639 | 4291 | 6.402983 | GGAAGATCAAGACTATGTTGCAACTG | 60.403 | 42.308 | 28.61 | 20.08 | 0.00 | 3.16 |
2640 | 4292 | 5.555017 | AGATCAAGACTATGTTGCAACTGT | 58.445 | 37.500 | 28.61 | 22.76 | 0.00 | 3.55 |
2642 | 4294 | 5.422666 | TCAAGACTATGTTGCAACTGTTG | 57.577 | 39.130 | 28.61 | 21.46 | 0.00 | 3.33 |
2644 | 4296 | 5.356751 | TCAAGACTATGTTGCAACTGTTGTT | 59.643 | 36.000 | 28.61 | 17.41 | 36.75 | 2.83 |
2646 | 4298 | 6.935741 | AGACTATGTTGCAACTGTTGTTTA | 57.064 | 33.333 | 28.61 | 7.76 | 33.52 | 2.01 |
2648 | 4300 | 5.519722 | ACTATGTTGCAACTGTTGTTTAGC | 58.480 | 37.500 | 28.61 | 7.53 | 33.52 | 3.09 |
2658 | 4314 | 3.365832 | CTGTTGTTTAGCTGCAACTGTG | 58.634 | 45.455 | 22.17 | 13.40 | 43.66 | 3.66 |
2692 | 4348 | 6.472686 | ACTCAGTCTACAAGTCTCTTGTTT | 57.527 | 37.500 | 18.02 | 0.25 | 34.11 | 2.83 |
2693 | 4349 | 7.584122 | ACTCAGTCTACAAGTCTCTTGTTTA | 57.416 | 36.000 | 18.02 | 6.51 | 34.11 | 2.01 |
2705 | 4361 | 2.533391 | CTTGTTTAGCGCTGCCTGCC | 62.533 | 60.000 | 22.90 | 2.19 | 38.78 | 4.85 |
2734 | 4390 | 0.462047 | AAGATAACGAAGCCGGCAGG | 60.462 | 55.000 | 31.54 | 19.35 | 40.78 | 4.85 |
2815 | 4471 | 4.974368 | ACCGACAGAAAAATCACACAAA | 57.026 | 36.364 | 0.00 | 0.00 | 0.00 | 2.83 |
2839 | 4495 | 2.447572 | TGGCCAGTGGTGACCTCA | 60.448 | 61.111 | 11.74 | 0.00 | 0.00 | 3.86 |
2860 | 4516 | 8.737168 | CCTCATTGGTGTCAAATATAGAAAGA | 57.263 | 34.615 | 0.00 | 0.00 | 36.36 | 2.52 |
2890 | 4546 | 0.882042 | CAGACTTGTGGCAGCTCGTT | 60.882 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2897 | 4553 | 2.279741 | TGTGGCAGCTCGTTAATGATC | 58.720 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
2937 | 4593 | 4.222145 | TGCCTACTTCTAGAACCGACAAAT | 59.778 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
2940 | 4596 | 6.476053 | GCCTACTTCTAGAACCGACAAATTAG | 59.524 | 42.308 | 0.00 | 0.00 | 0.00 | 1.73 |
2941 | 4597 | 7.630082 | GCCTACTTCTAGAACCGACAAATTAGA | 60.630 | 40.741 | 0.00 | 0.00 | 0.00 | 2.10 |
2942 | 4598 | 8.248945 | CCTACTTCTAGAACCGACAAATTAGAA | 58.751 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
2990 | 4646 | 3.493176 | CGTTCCACAGGATGATGCATAGA | 60.493 | 47.826 | 0.00 | 0.00 | 39.69 | 1.98 |
3232 | 4908 | 2.762535 | TTTTTCCTGCTACTCCCTCG | 57.237 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3233 | 4909 | 0.902531 | TTTTCCTGCTACTCCCTCGG | 59.097 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3234 | 4910 | 0.040646 | TTTCCTGCTACTCCCTCGGA | 59.959 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
3235 | 4911 | 0.040646 | TTCCTGCTACTCCCTCGGAA | 59.959 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3236 | 4912 | 0.040646 | TCCTGCTACTCCCTCGGAAA | 59.959 | 55.000 | 0.00 | 0.00 | 0.00 | 3.13 |
3237 | 4913 | 0.902531 | CCTGCTACTCCCTCGGAAAA | 59.097 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3238 | 4914 | 1.134670 | CCTGCTACTCCCTCGGAAAAG | 60.135 | 57.143 | 0.00 | 0.00 | 0.00 | 2.27 |
3239 | 4915 | 1.825474 | CTGCTACTCCCTCGGAAAAGA | 59.175 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
3240 | 4916 | 2.233922 | CTGCTACTCCCTCGGAAAAGAA | 59.766 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3241 | 4917 | 2.838202 | TGCTACTCCCTCGGAAAAGAAT | 59.162 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
3242 | 4918 | 3.263425 | TGCTACTCCCTCGGAAAAGAATT | 59.737 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
3243 | 4919 | 3.872182 | GCTACTCCCTCGGAAAAGAATTC | 59.128 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
3244 | 4920 | 4.383226 | GCTACTCCCTCGGAAAAGAATTCT | 60.383 | 45.833 | 0.88 | 0.88 | 0.00 | 2.40 |
3245 | 4921 | 5.163437 | GCTACTCCCTCGGAAAAGAATTCTA | 60.163 | 44.000 | 8.75 | 0.00 | 0.00 | 2.10 |
3246 | 4922 | 5.959583 | ACTCCCTCGGAAAAGAATTCTAT | 57.040 | 39.130 | 8.75 | 0.41 | 0.00 | 1.98 |
3247 | 4923 | 5.675538 | ACTCCCTCGGAAAAGAATTCTATG | 58.324 | 41.667 | 8.75 | 0.00 | 0.00 | 2.23 |
3248 | 4924 | 5.425539 | ACTCCCTCGGAAAAGAATTCTATGA | 59.574 | 40.000 | 8.75 | 2.08 | 0.00 | 2.15 |
3249 | 4925 | 5.918608 | TCCCTCGGAAAAGAATTCTATGAG | 58.081 | 41.667 | 8.75 | 10.93 | 0.00 | 2.90 |
3250 | 4926 | 5.661312 | TCCCTCGGAAAAGAATTCTATGAGA | 59.339 | 40.000 | 8.75 | 4.64 | 0.00 | 3.27 |
3251 | 4927 | 5.755861 | CCCTCGGAAAAGAATTCTATGAGAC | 59.244 | 44.000 | 8.75 | 0.00 | 0.00 | 3.36 |
3252 | 4928 | 5.755861 | CCTCGGAAAAGAATTCTATGAGACC | 59.244 | 44.000 | 8.75 | 6.24 | 0.00 | 3.85 |
3253 | 4929 | 6.294361 | TCGGAAAAGAATTCTATGAGACCA | 57.706 | 37.500 | 8.75 | 0.00 | 0.00 | 4.02 |
3254 | 4930 | 6.341316 | TCGGAAAAGAATTCTATGAGACCAG | 58.659 | 40.000 | 8.75 | 4.64 | 0.00 | 4.00 |
3255 | 4931 | 5.525378 | CGGAAAAGAATTCTATGAGACCAGG | 59.475 | 44.000 | 8.75 | 0.00 | 0.00 | 4.45 |
3256 | 4932 | 6.418946 | GGAAAAGAATTCTATGAGACCAGGT | 58.581 | 40.000 | 8.75 | 0.00 | 0.00 | 4.00 |
3257 | 4933 | 6.540551 | GGAAAAGAATTCTATGAGACCAGGTC | 59.459 | 42.308 | 12.25 | 12.25 | 0.00 | 3.85 |
3258 | 4934 | 6.882768 | AAAGAATTCTATGAGACCAGGTCT | 57.117 | 37.500 | 23.18 | 23.18 | 46.42 | 3.85 |
3266 | 4942 | 3.383162 | AGACCAGGTCTCACGGATT | 57.617 | 52.632 | 17.31 | 0.00 | 38.71 | 3.01 |
3267 | 4943 | 2.526888 | AGACCAGGTCTCACGGATTA | 57.473 | 50.000 | 17.31 | 0.00 | 38.71 | 1.75 |
3268 | 4944 | 2.379972 | AGACCAGGTCTCACGGATTAG | 58.620 | 52.381 | 17.31 | 0.00 | 38.71 | 1.73 |
3269 | 4945 | 0.824759 | ACCAGGTCTCACGGATTAGC | 59.175 | 55.000 | 0.00 | 0.00 | 0.00 | 3.09 |
3270 | 4946 | 0.824109 | CCAGGTCTCACGGATTAGCA | 59.176 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
3271 | 4947 | 1.202463 | CCAGGTCTCACGGATTAGCAG | 60.202 | 57.143 | 0.00 | 0.00 | 0.00 | 4.24 |
3272 | 4948 | 0.461961 | AGGTCTCACGGATTAGCAGC | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
3273 | 4949 | 0.461961 | GGTCTCACGGATTAGCAGCT | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
3274 | 4950 | 1.565305 | GTCTCACGGATTAGCAGCTG | 58.435 | 55.000 | 10.11 | 10.11 | 0.00 | 4.24 |
3275 | 4951 | 1.135139 | GTCTCACGGATTAGCAGCTGA | 59.865 | 52.381 | 20.43 | 0.00 | 0.00 | 4.26 |
3276 | 4952 | 1.406898 | TCTCACGGATTAGCAGCTGAG | 59.593 | 52.381 | 20.43 | 1.96 | 0.00 | 3.35 |
3277 | 4953 | 1.406898 | CTCACGGATTAGCAGCTGAGA | 59.593 | 52.381 | 20.43 | 0.00 | 0.00 | 3.27 |
3278 | 4954 | 1.135139 | TCACGGATTAGCAGCTGAGAC | 59.865 | 52.381 | 20.43 | 0.00 | 0.00 | 3.36 |
3279 | 4955 | 1.134995 | CACGGATTAGCAGCTGAGACA | 60.135 | 52.381 | 20.43 | 0.00 | 0.00 | 3.41 |
3280 | 4956 | 1.134965 | ACGGATTAGCAGCTGAGACAC | 60.135 | 52.381 | 20.43 | 5.00 | 0.00 | 3.67 |
3281 | 4957 | 1.134995 | CGGATTAGCAGCTGAGACACA | 60.135 | 52.381 | 20.43 | 0.00 | 0.00 | 3.72 |
3282 | 4958 | 2.482664 | CGGATTAGCAGCTGAGACACAT | 60.483 | 50.000 | 20.43 | 0.00 | 0.00 | 3.21 |
3283 | 4959 | 3.129871 | GGATTAGCAGCTGAGACACATC | 58.870 | 50.000 | 20.43 | 8.82 | 0.00 | 3.06 |
3284 | 4960 | 2.680312 | TTAGCAGCTGAGACACATCC | 57.320 | 50.000 | 20.43 | 0.00 | 0.00 | 3.51 |
3285 | 4961 | 1.857965 | TAGCAGCTGAGACACATCCT | 58.142 | 50.000 | 20.43 | 3.77 | 0.00 | 3.24 |
3286 | 4962 | 0.249676 | AGCAGCTGAGACACATCCTG | 59.750 | 55.000 | 20.43 | 0.00 | 33.71 | 3.86 |
3287 | 4963 | 0.248565 | GCAGCTGAGACACATCCTGA | 59.751 | 55.000 | 20.43 | 0.00 | 32.93 | 3.86 |
3288 | 4964 | 1.134461 | GCAGCTGAGACACATCCTGAT | 60.134 | 52.381 | 20.43 | 0.00 | 32.93 | 2.90 |
3289 | 4965 | 2.552031 | CAGCTGAGACACATCCTGATG | 58.448 | 52.381 | 8.42 | 5.60 | 44.15 | 3.07 |
3290 | 4966 | 1.485480 | AGCTGAGACACATCCTGATGG | 59.515 | 52.381 | 11.56 | 3.67 | 42.91 | 3.51 |
3301 | 4977 | 0.536724 | TCCTGATGGATGACACGTGG | 59.463 | 55.000 | 21.57 | 1.66 | 37.46 | 4.94 |
3302 | 4978 | 1.091771 | CCTGATGGATGACACGTGGC | 61.092 | 60.000 | 21.57 | 19.24 | 34.57 | 5.01 |
3303 | 4979 | 0.391528 | CTGATGGATGACACGTGGCA | 60.392 | 55.000 | 29.28 | 29.28 | 37.54 | 4.92 |
3305 | 4981 | 1.339920 | TGATGGATGACACGTGGCATT | 60.340 | 47.619 | 36.07 | 22.11 | 45.42 | 3.56 |
3306 | 4982 | 1.331756 | GATGGATGACACGTGGCATTC | 59.668 | 52.381 | 36.07 | 34.16 | 45.42 | 2.67 |
3307 | 4983 | 0.036022 | TGGATGACACGTGGCATTCA | 59.964 | 50.000 | 36.64 | 36.64 | 46.54 | 2.57 |
3308 | 4984 | 0.447801 | GGATGACACGTGGCATTCAC | 59.552 | 55.000 | 36.07 | 24.74 | 45.42 | 3.18 |
3309 | 4985 | 1.155889 | GATGACACGTGGCATTCACA | 58.844 | 50.000 | 36.07 | 9.07 | 45.42 | 3.58 |
3310 | 4986 | 1.535028 | GATGACACGTGGCATTCACAA | 59.465 | 47.619 | 36.07 | 8.22 | 45.42 | 3.33 |
3311 | 4987 | 1.383523 | TGACACGTGGCATTCACAAA | 58.616 | 45.000 | 23.03 | 0.00 | 46.36 | 2.83 |
3312 | 4988 | 1.952990 | TGACACGTGGCATTCACAAAT | 59.047 | 42.857 | 23.03 | 0.00 | 46.36 | 2.32 |
3313 | 4989 | 2.031245 | TGACACGTGGCATTCACAAATC | 60.031 | 45.455 | 23.03 | 3.54 | 46.36 | 2.17 |
3314 | 4990 | 1.952990 | ACACGTGGCATTCACAAATCA | 59.047 | 42.857 | 21.57 | 0.00 | 46.36 | 2.57 |
3315 | 4991 | 2.287547 | ACACGTGGCATTCACAAATCAC | 60.288 | 45.455 | 21.57 | 0.00 | 46.36 | 3.06 |
3316 | 4992 | 1.952990 | ACGTGGCATTCACAAATCACA | 59.047 | 42.857 | 0.00 | 0.00 | 46.36 | 3.58 |
3317 | 4993 | 2.360483 | ACGTGGCATTCACAAATCACAA | 59.640 | 40.909 | 0.00 | 0.00 | 46.36 | 3.33 |
3318 | 4994 | 3.181482 | ACGTGGCATTCACAAATCACAAA | 60.181 | 39.130 | 0.00 | 0.00 | 46.36 | 2.83 |
3319 | 4995 | 3.426191 | CGTGGCATTCACAAATCACAAAG | 59.574 | 43.478 | 0.00 | 0.00 | 46.36 | 2.77 |
3320 | 4996 | 3.184986 | GTGGCATTCACAAATCACAAAGC | 59.815 | 43.478 | 0.00 | 0.00 | 45.39 | 3.51 |
3321 | 4997 | 3.181468 | TGGCATTCACAAATCACAAAGCA | 60.181 | 39.130 | 0.00 | 0.00 | 0.00 | 3.91 |
3322 | 4998 | 3.998341 | GGCATTCACAAATCACAAAGCAT | 59.002 | 39.130 | 0.00 | 0.00 | 0.00 | 3.79 |
3323 | 4999 | 4.092383 | GGCATTCACAAATCACAAAGCATC | 59.908 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
3324 | 5000 | 4.927425 | GCATTCACAAATCACAAAGCATCT | 59.073 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
3325 | 5001 | 6.094719 | GCATTCACAAATCACAAAGCATCTA | 58.905 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
3326 | 5002 | 6.034256 | GCATTCACAAATCACAAAGCATCTAC | 59.966 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
3327 | 5003 | 5.627499 | TCACAAATCACAAAGCATCTACC | 57.373 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
3328 | 5004 | 4.458989 | TCACAAATCACAAAGCATCTACCC | 59.541 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
3329 | 5005 | 3.763897 | ACAAATCACAAAGCATCTACCCC | 59.236 | 43.478 | 0.00 | 0.00 | 0.00 | 4.95 |
3330 | 5006 | 3.737559 | AATCACAAAGCATCTACCCCA | 57.262 | 42.857 | 0.00 | 0.00 | 0.00 | 4.96 |
3331 | 5007 | 2.489938 | TCACAAAGCATCTACCCCAC | 57.510 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3332 | 5008 | 1.004277 | TCACAAAGCATCTACCCCACC | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
3333 | 5009 | 0.331616 | ACAAAGCATCTACCCCACCC | 59.668 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3334 | 5010 | 0.395724 | CAAAGCATCTACCCCACCCC | 60.396 | 60.000 | 0.00 | 0.00 | 0.00 | 4.95 |
3335 | 5011 | 1.580994 | AAAGCATCTACCCCACCCCC | 61.581 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
3336 | 5012 | 2.694616 | GCATCTACCCCACCCCCA | 60.695 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
3337 | 5013 | 3.056754 | GCATCTACCCCACCCCCAC | 62.057 | 68.421 | 0.00 | 0.00 | 0.00 | 4.61 |
3338 | 5014 | 2.043941 | ATCTACCCCACCCCCACC | 59.956 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3339 | 5015 | 2.587774 | ATCTACCCCACCCCCACCT | 61.588 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
3340 | 5016 | 2.857998 | ATCTACCCCACCCCCACCTG | 62.858 | 65.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3341 | 5017 | 3.543626 | TACCCCACCCCCACCTGA | 61.544 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
3342 | 5018 | 3.130153 | TACCCCACCCCCACCTGAA | 62.130 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
3343 | 5019 | 2.656269 | TACCCCACCCCCACCTGAAA | 62.656 | 60.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3344 | 5020 | 2.557181 | CCCCACCCCCACCTGAAAT | 61.557 | 63.158 | 0.00 | 0.00 | 0.00 | 2.17 |
3345 | 5021 | 1.000359 | CCCACCCCCACCTGAAATC | 60.000 | 63.158 | 0.00 | 0.00 | 0.00 | 2.17 |
3346 | 5022 | 1.378514 | CCACCCCCACCTGAAATCG | 60.379 | 63.158 | 0.00 | 0.00 | 0.00 | 3.34 |
3347 | 5023 | 1.682849 | CACCCCCACCTGAAATCGA | 59.317 | 57.895 | 0.00 | 0.00 | 0.00 | 3.59 |
3348 | 5024 | 0.392998 | CACCCCCACCTGAAATCGAG | 60.393 | 60.000 | 0.00 | 0.00 | 0.00 | 4.04 |
3349 | 5025 | 1.224592 | CCCCCACCTGAAATCGAGG | 59.775 | 63.158 | 0.00 | 0.00 | 36.57 | 4.63 |
3350 | 5026 | 1.224592 | CCCCACCTGAAATCGAGGG | 59.775 | 63.158 | 0.00 | 0.00 | 34.56 | 4.30 |
3351 | 5027 | 1.224592 | CCCACCTGAAATCGAGGGG | 59.775 | 63.158 | 0.00 | 0.00 | 34.56 | 4.79 |
3352 | 5028 | 4.963878 | CACCTGAAATCGAGGGGG | 57.036 | 61.111 | 0.00 | 0.00 | 34.56 | 5.40 |
3374 | 5050 | 5.888982 | GGGGGAGATTAGATACTTTGTGA | 57.111 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
3375 | 5051 | 6.441088 | GGGGGAGATTAGATACTTTGTGAT | 57.559 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
3376 | 5052 | 6.842676 | GGGGGAGATTAGATACTTTGTGATT | 58.157 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3377 | 5053 | 7.290813 | GGGGGAGATTAGATACTTTGTGATTT | 58.709 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
3378 | 5054 | 8.437575 | GGGGGAGATTAGATACTTTGTGATTTA | 58.562 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
3389 | 5065 | 9.586150 | GATACTTTGTGATTTATGAATGCTACG | 57.414 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
3390 | 5066 | 7.377766 | ACTTTGTGATTTATGAATGCTACGT | 57.622 | 32.000 | 0.00 | 0.00 | 0.00 | 3.57 |
3391 | 5067 | 7.243487 | ACTTTGTGATTTATGAATGCTACGTG | 58.757 | 34.615 | 0.00 | 0.00 | 0.00 | 4.49 |
3392 | 5068 | 6.735678 | TTGTGATTTATGAATGCTACGTGT | 57.264 | 33.333 | 0.00 | 0.00 | 0.00 | 4.49 |
3393 | 5069 | 6.344572 | TGTGATTTATGAATGCTACGTGTC | 57.655 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
3394 | 5070 | 5.872070 | TGTGATTTATGAATGCTACGTGTCA | 59.128 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3395 | 5071 | 6.538381 | TGTGATTTATGAATGCTACGTGTCAT | 59.462 | 34.615 | 0.00 | 0.00 | 35.05 | 3.06 |
3396 | 5072 | 7.065894 | GTGATTTATGAATGCTACGTGTCATC | 58.934 | 38.462 | 0.00 | 0.00 | 32.99 | 2.92 |
3397 | 5073 | 5.984233 | TTTATGAATGCTACGTGTCATCC | 57.016 | 39.130 | 0.00 | 0.00 | 32.99 | 3.51 |
3398 | 5074 | 3.541996 | ATGAATGCTACGTGTCATCCA | 57.458 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
3399 | 5075 | 3.541996 | TGAATGCTACGTGTCATCCAT | 57.458 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
3400 | 5076 | 3.197265 | TGAATGCTACGTGTCATCCATG | 58.803 | 45.455 | 0.00 | 0.00 | 36.08 | 3.66 |
3401 | 5077 | 3.118811 | TGAATGCTACGTGTCATCCATGA | 60.119 | 43.478 | 0.00 | 0.00 | 34.01 | 3.07 |
3402 | 5078 | 2.584492 | TGCTACGTGTCATCCATGAG | 57.416 | 50.000 | 0.00 | 0.00 | 37.51 | 2.90 |
3403 | 5079 | 1.136891 | TGCTACGTGTCATCCATGAGG | 59.863 | 52.381 | 0.00 | 0.00 | 37.51 | 3.86 |
3404 | 5080 | 1.539065 | GCTACGTGTCATCCATGAGGG | 60.539 | 57.143 | 0.00 | 0.00 | 37.51 | 4.30 |
3405 | 5081 | 0.464036 | TACGTGTCATCCATGAGGGC | 59.536 | 55.000 | 0.00 | 0.00 | 37.51 | 5.19 |
3406 | 5082 | 1.884464 | CGTGTCATCCATGAGGGCG | 60.884 | 63.158 | 0.00 | 0.00 | 37.51 | 6.13 |
3407 | 5083 | 1.524621 | GTGTCATCCATGAGGGCGG | 60.525 | 63.158 | 0.00 | 0.00 | 37.51 | 6.13 |
3408 | 5084 | 2.111878 | GTCATCCATGAGGGCGGG | 59.888 | 66.667 | 0.00 | 0.00 | 37.51 | 6.13 |
3409 | 5085 | 2.366837 | TCATCCATGAGGGCGGGT | 60.367 | 61.111 | 0.00 | 0.00 | 36.21 | 5.28 |
3410 | 5086 | 2.111878 | CATCCATGAGGGCGGGTC | 59.888 | 66.667 | 0.00 | 0.00 | 36.21 | 4.46 |
3411 | 5087 | 2.040464 | ATCCATGAGGGCGGGTCT | 60.040 | 61.111 | 0.00 | 0.00 | 36.21 | 3.85 |
3412 | 5088 | 2.143419 | ATCCATGAGGGCGGGTCTC | 61.143 | 63.158 | 0.00 | 0.00 | 36.21 | 3.36 |
3413 | 5089 | 2.896677 | ATCCATGAGGGCGGGTCTCA | 62.897 | 60.000 | 0.00 | 0.00 | 44.19 | 3.27 |
3414 | 5090 | 2.187946 | CATGAGGGCGGGTCTCAC | 59.812 | 66.667 | 0.00 | 0.00 | 43.07 | 3.51 |
3415 | 5091 | 3.083997 | ATGAGGGCGGGTCTCACC | 61.084 | 66.667 | 0.00 | 0.00 | 43.07 | 4.02 |
3416 | 5092 | 3.625632 | ATGAGGGCGGGTCTCACCT | 62.626 | 63.158 | 0.00 | 0.00 | 43.07 | 4.00 |
3424 | 5100 | 1.656652 | CGGGTCTCACCTGCTAATTG | 58.343 | 55.000 | 0.00 | 0.00 | 37.90 | 2.32 |
3425 | 5101 | 1.066143 | CGGGTCTCACCTGCTAATTGT | 60.066 | 52.381 | 0.00 | 0.00 | 37.90 | 2.71 |
3426 | 5102 | 2.359900 | GGGTCTCACCTGCTAATTGTG | 58.640 | 52.381 | 0.00 | 0.00 | 38.64 | 3.33 |
3427 | 5103 | 2.027192 | GGGTCTCACCTGCTAATTGTGA | 60.027 | 50.000 | 0.00 | 0.00 | 38.64 | 3.58 |
3431 | 5107 | 3.334583 | TCACCTGCTAATTGTGAGACC | 57.665 | 47.619 | 0.00 | 0.00 | 34.28 | 3.85 |
3432 | 5108 | 2.906389 | TCACCTGCTAATTGTGAGACCT | 59.094 | 45.455 | 0.00 | 0.00 | 34.28 | 3.85 |
3433 | 5109 | 4.093743 | TCACCTGCTAATTGTGAGACCTA | 58.906 | 43.478 | 0.00 | 0.00 | 34.28 | 3.08 |
3434 | 5110 | 4.160439 | TCACCTGCTAATTGTGAGACCTAG | 59.840 | 45.833 | 0.00 | 0.00 | 34.28 | 3.02 |
3435 | 5111 | 4.081420 | CACCTGCTAATTGTGAGACCTAGT | 60.081 | 45.833 | 0.00 | 0.00 | 31.66 | 2.57 |
3436 | 5112 | 4.160626 | ACCTGCTAATTGTGAGACCTAGTC | 59.839 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
3437 | 5113 | 4.404073 | CCTGCTAATTGTGAGACCTAGTCT | 59.596 | 45.833 | 0.00 | 0.00 | 46.42 | 3.24 |
3466 | 5142 | 1.437397 | TTTTTCCCTACACCCTCCGT | 58.563 | 50.000 | 0.00 | 0.00 | 0.00 | 4.69 |
3467 | 5143 | 1.437397 | TTTTCCCTACACCCTCCGTT | 58.563 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3468 | 5144 | 1.437397 | TTTCCCTACACCCTCCGTTT | 58.563 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
3469 | 5145 | 0.978907 | TTCCCTACACCCTCCGTTTC | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 2.78 |
3470 | 5146 | 0.115745 | TCCCTACACCCTCCGTTTCT | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3471 | 5147 | 0.981943 | CCCTACACCCTCCGTTTCTT | 59.018 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3472 | 5148 | 1.350019 | CCCTACACCCTCCGTTTCTTT | 59.650 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
3473 | 5149 | 2.568509 | CCCTACACCCTCCGTTTCTTTA | 59.431 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3474 | 5150 | 3.199289 | CCCTACACCCTCCGTTTCTTTAT | 59.801 | 47.826 | 0.00 | 0.00 | 0.00 | 1.40 |
3475 | 5151 | 4.189231 | CCTACACCCTCCGTTTCTTTATG | 58.811 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
3476 | 5152 | 3.782656 | ACACCCTCCGTTTCTTTATGT | 57.217 | 42.857 | 0.00 | 0.00 | 0.00 | 2.29 |
3477 | 5153 | 4.895668 | ACACCCTCCGTTTCTTTATGTA | 57.104 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
3478 | 5154 | 5.231702 | ACACCCTCCGTTTCTTTATGTAA | 57.768 | 39.130 | 0.00 | 0.00 | 0.00 | 2.41 |
3479 | 5155 | 5.243207 | ACACCCTCCGTTTCTTTATGTAAG | 58.757 | 41.667 | 0.00 | 0.00 | 35.04 | 2.34 |
3480 | 5156 | 4.634443 | CACCCTCCGTTTCTTTATGTAAGG | 59.366 | 45.833 | 0.00 | 0.00 | 34.46 | 2.69 |
3481 | 5157 | 4.287845 | ACCCTCCGTTTCTTTATGTAAGGT | 59.712 | 41.667 | 0.00 | 0.00 | 34.46 | 3.50 |
3482 | 5158 | 4.634443 | CCCTCCGTTTCTTTATGTAAGGTG | 59.366 | 45.833 | 0.00 | 0.00 | 34.46 | 4.00 |
3483 | 5159 | 5.243207 | CCTCCGTTTCTTTATGTAAGGTGT | 58.757 | 41.667 | 0.00 | 0.00 | 34.46 | 4.16 |
3484 | 5160 | 6.400568 | CCTCCGTTTCTTTATGTAAGGTGTA | 58.599 | 40.000 | 0.00 | 0.00 | 34.46 | 2.90 |
3485 | 5161 | 7.046033 | CCTCCGTTTCTTTATGTAAGGTGTAT | 58.954 | 38.462 | 0.00 | 0.00 | 34.46 | 2.29 |
3486 | 5162 | 7.551617 | CCTCCGTTTCTTTATGTAAGGTGTATT | 59.448 | 37.037 | 0.00 | 0.00 | 34.46 | 1.89 |
3487 | 5163 | 9.590451 | CTCCGTTTCTTTATGTAAGGTGTATTA | 57.410 | 33.333 | 0.00 | 0.00 | 34.46 | 0.98 |
3499 | 5175 | 7.808672 | TGTAAGGTGTATTATTTTTGACACGG | 58.191 | 34.615 | 0.00 | 0.00 | 42.50 | 4.94 |
3500 | 5176 | 6.887626 | AAGGTGTATTATTTTTGACACGGT | 57.112 | 33.333 | 0.00 | 0.00 | 42.50 | 4.83 |
3501 | 5177 | 6.249035 | AGGTGTATTATTTTTGACACGGTG | 57.751 | 37.500 | 6.58 | 6.58 | 42.50 | 4.94 |
3502 | 5178 | 5.998981 | AGGTGTATTATTTTTGACACGGTGA | 59.001 | 36.000 | 16.29 | 0.00 | 42.50 | 4.02 |
3503 | 5179 | 6.657541 | AGGTGTATTATTTTTGACACGGTGAT | 59.342 | 34.615 | 16.29 | 0.00 | 42.50 | 3.06 |
3504 | 5180 | 6.964934 | GGTGTATTATTTTTGACACGGTGATC | 59.035 | 38.462 | 16.29 | 9.19 | 42.50 | 2.92 |
3505 | 5181 | 7.361371 | GGTGTATTATTTTTGACACGGTGATCA | 60.361 | 37.037 | 16.29 | 11.66 | 42.50 | 2.92 |
3506 | 5182 | 8.018520 | GTGTATTATTTTTGACACGGTGATCAA | 58.981 | 33.333 | 16.29 | 16.53 | 33.50 | 2.57 |
3507 | 5183 | 8.233868 | TGTATTATTTTTGACACGGTGATCAAG | 58.766 | 33.333 | 16.29 | 0.00 | 36.26 | 3.02 |
3508 | 5184 | 6.627395 | TTATTTTTGACACGGTGATCAAGT | 57.373 | 33.333 | 16.29 | 11.93 | 36.26 | 3.16 |
3509 | 5185 | 4.545823 | TTTTTGACACGGTGATCAAGTC | 57.454 | 40.909 | 16.29 | 4.51 | 36.26 | 3.01 |
3510 | 5186 | 2.900716 | TTGACACGGTGATCAAGTCA | 57.099 | 45.000 | 16.29 | 14.06 | 37.43 | 3.41 |
3525 | 5201 | 8.675705 | TGATCAAGTCACACAATTTTAGAGAA | 57.324 | 30.769 | 0.00 | 0.00 | 0.00 | 2.87 |
3526 | 5202 | 8.777413 | TGATCAAGTCACACAATTTTAGAGAAG | 58.223 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
3527 | 5203 | 8.682936 | ATCAAGTCACACAATTTTAGAGAAGT | 57.317 | 30.769 | 0.00 | 0.00 | 0.00 | 3.01 |
3528 | 5204 | 8.506168 | TCAAGTCACACAATTTTAGAGAAGTT | 57.494 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
3529 | 5205 | 9.607988 | TCAAGTCACACAATTTTAGAGAAGTTA | 57.392 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
3532 | 5208 | 9.778741 | AGTCACACAATTTTAGAGAAGTTATGA | 57.221 | 29.630 | 0.00 | 0.00 | 0.00 | 2.15 |
3533 | 5209 | 9.813080 | GTCACACAATTTTAGAGAAGTTATGAC | 57.187 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
3534 | 5210 | 8.708742 | TCACACAATTTTAGAGAAGTTATGACG | 58.291 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
3535 | 5211 | 8.708742 | CACACAATTTTAGAGAAGTTATGACGA | 58.291 | 33.333 | 0.00 | 0.00 | 0.00 | 4.20 |
3536 | 5212 | 9.268268 | ACACAATTTTAGAGAAGTTATGACGAA | 57.732 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
3543 | 5219 | 8.937634 | TTAGAGAAGTTATGACGAAATTACCC | 57.062 | 34.615 | 0.00 | 0.00 | 0.00 | 3.69 |
3544 | 5220 | 7.184067 | AGAGAAGTTATGACGAAATTACCCT | 57.816 | 36.000 | 0.00 | 0.00 | 0.00 | 4.34 |
3545 | 5221 | 7.621796 | AGAGAAGTTATGACGAAATTACCCTT | 58.378 | 34.615 | 0.00 | 0.00 | 0.00 | 3.95 |
3546 | 5222 | 7.549488 | AGAGAAGTTATGACGAAATTACCCTTG | 59.451 | 37.037 | 0.00 | 0.00 | 0.00 | 3.61 |
3547 | 5223 | 6.598064 | AGAAGTTATGACGAAATTACCCTTGG | 59.402 | 38.462 | 0.00 | 0.00 | 0.00 | 3.61 |
3548 | 5224 | 6.057321 | AGTTATGACGAAATTACCCTTGGA | 57.943 | 37.500 | 0.00 | 0.00 | 0.00 | 3.53 |
3549 | 5225 | 6.478129 | AGTTATGACGAAATTACCCTTGGAA | 58.522 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3550 | 5226 | 6.943718 | AGTTATGACGAAATTACCCTTGGAAA | 59.056 | 34.615 | 0.00 | 0.00 | 0.00 | 3.13 |
3551 | 5227 | 7.449086 | AGTTATGACGAAATTACCCTTGGAAAA | 59.551 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
3552 | 5228 | 6.850752 | ATGACGAAATTACCCTTGGAAAAT | 57.149 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
3553 | 5229 | 6.262193 | TGACGAAATTACCCTTGGAAAATC | 57.738 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
3554 | 5230 | 6.007703 | TGACGAAATTACCCTTGGAAAATCT | 58.992 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3555 | 5231 | 6.072175 | TGACGAAATTACCCTTGGAAAATCTG | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
3556 | 5232 | 5.773176 | ACGAAATTACCCTTGGAAAATCTGT | 59.227 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3557 | 5233 | 6.266786 | ACGAAATTACCCTTGGAAAATCTGTT | 59.733 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
3558 | 5234 | 6.586082 | CGAAATTACCCTTGGAAAATCTGTTG | 59.414 | 38.462 | 0.00 | 0.00 | 0.00 | 3.33 |
3559 | 5235 | 4.864704 | TTACCCTTGGAAAATCTGTTGC | 57.135 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
3560 | 5236 | 2.962859 | ACCCTTGGAAAATCTGTTGCT | 58.037 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
6 | 7 | 1.803334 | TAAAGTTCCACGCGCTGATT | 58.197 | 45.000 | 5.73 | 0.00 | 0.00 | 2.57 |
7 | 8 | 1.803334 | TTAAAGTTCCACGCGCTGAT | 58.197 | 45.000 | 5.73 | 0.00 | 0.00 | 2.90 |
8 | 9 | 1.262151 | GTTTAAAGTTCCACGCGCTGA | 59.738 | 47.619 | 5.73 | 0.00 | 0.00 | 4.26 |
9 | 10 | 1.263217 | AGTTTAAAGTTCCACGCGCTG | 59.737 | 47.619 | 5.73 | 3.55 | 0.00 | 5.18 |
10 | 11 | 1.263217 | CAGTTTAAAGTTCCACGCGCT | 59.737 | 47.619 | 5.73 | 0.00 | 0.00 | 5.92 |
11 | 12 | 1.670326 | CAGTTTAAAGTTCCACGCGC | 58.330 | 50.000 | 5.73 | 0.00 | 0.00 | 6.86 |
12 | 13 | 1.263217 | AGCAGTTTAAAGTTCCACGCG | 59.737 | 47.619 | 3.53 | 3.53 | 0.00 | 6.01 |
13 | 14 | 2.650608 | CAGCAGTTTAAAGTTCCACGC | 58.349 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
14 | 15 | 2.032799 | TGCAGCAGTTTAAAGTTCCACG | 59.967 | 45.455 | 0.00 | 0.00 | 0.00 | 4.94 |
15 | 16 | 3.181491 | TGTGCAGCAGTTTAAAGTTCCAC | 60.181 | 43.478 | 0.00 | 0.13 | 0.00 | 4.02 |
16 | 17 | 3.020274 | TGTGCAGCAGTTTAAAGTTCCA | 58.980 | 40.909 | 0.00 | 0.00 | 0.00 | 3.53 |
17 | 18 | 3.181491 | TGTGTGCAGCAGTTTAAAGTTCC | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 3.62 |
18 | 19 | 4.027572 | TGTGTGCAGCAGTTTAAAGTTC | 57.972 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
19 | 20 | 4.654091 | ATGTGTGCAGCAGTTTAAAGTT | 57.346 | 36.364 | 0.00 | 0.00 | 0.00 | 2.66 |
20 | 21 | 4.654091 | AATGTGTGCAGCAGTTTAAAGT | 57.346 | 36.364 | 0.00 | 0.00 | 0.00 | 2.66 |
21 | 22 | 5.971895 | AAAATGTGTGCAGCAGTTTAAAG | 57.028 | 34.783 | 12.87 | 0.00 | 33.28 | 1.85 |
58 | 59 | 7.227314 | TGTTCTTTATGATATGCATGAGACACC | 59.773 | 37.037 | 10.16 | 0.00 | 37.87 | 4.16 |
114 | 115 | 8.854117 | AGATGTTCTGCTATCTTTTCAGTTTTT | 58.146 | 29.630 | 0.00 | 0.00 | 29.64 | 1.94 |
141 | 142 | 1.495584 | GGCGTTTGTGTCAAGCTCGA | 61.496 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
368 | 372 | 1.068472 | CCTTCAGCGTCTTAGTCGTGT | 60.068 | 52.381 | 0.68 | 0.00 | 0.00 | 4.49 |
383 | 387 | 2.026262 | GCAGGTATGGTTTCCTCCTTCA | 60.026 | 50.000 | 0.00 | 0.00 | 30.91 | 3.02 |
444 | 448 | 0.872021 | GGTCTGCATCGACGTCATCC | 60.872 | 60.000 | 17.16 | 0.97 | 34.75 | 3.51 |
449 | 453 | 0.037326 | ATTGTGGTCTGCATCGACGT | 60.037 | 50.000 | 0.00 | 0.00 | 34.75 | 4.34 |
573 | 577 | 1.808546 | CAATAATGGCGTGGCAGCA | 59.191 | 52.632 | 1.74 | 0.00 | 39.27 | 4.41 |
576 | 580 | 0.173029 | CAAGCAATAATGGCGTGGCA | 59.827 | 50.000 | 0.00 | 0.00 | 37.15 | 4.92 |
588 | 592 | 6.899393 | TGAAAACCAGTCTATTCAAGCAAT | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
598 | 603 | 5.261216 | GGGATGGATTTGAAAACCAGTCTA | 58.739 | 41.667 | 12.47 | 0.00 | 37.12 | 2.59 |
647 | 652 | 8.443953 | AATAAAGATTCTTTGGATCCTTCTCG | 57.556 | 34.615 | 19.60 | 0.00 | 0.00 | 4.04 |
649 | 654 | 9.406113 | CTGAATAAAGATTCTTTGGATCCTTCT | 57.594 | 33.333 | 19.60 | 3.05 | 41.87 | 2.85 |
703 | 708 | 3.449377 | AGGTTTTTGGGTTGTTCATCGTT | 59.551 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
717 | 724 | 6.954487 | ACTCCCTTGTAGTTTAGGTTTTTG | 57.046 | 37.500 | 0.00 | 0.00 | 0.00 | 2.44 |
753 | 760 | 1.376609 | GGTTGACGGATCCACATGCC | 61.377 | 60.000 | 13.41 | 12.03 | 0.00 | 4.40 |
756 | 763 | 0.914417 | AGGGGTTGACGGATCCACAT | 60.914 | 55.000 | 13.41 | 0.00 | 0.00 | 3.21 |
767 | 774 | 0.252057 | TCGGTGATGAGAGGGGTTGA | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
769 | 776 | 1.605058 | CGTCGGTGATGAGAGGGGTT | 61.605 | 60.000 | 0.00 | 0.00 | 0.00 | 4.11 |
775 | 782 | 1.366854 | CTCGGTCGTCGGTGATGAGA | 61.367 | 60.000 | 0.00 | 0.00 | 39.77 | 3.27 |
780 | 787 | 2.458610 | CGATCTCGGTCGTCGGTGA | 61.459 | 63.158 | 0.00 | 0.00 | 39.77 | 4.02 |
799 | 806 | 1.756950 | CGTCCTCCCCCTTCATCGA | 60.757 | 63.158 | 0.00 | 0.00 | 0.00 | 3.59 |
851 | 868 | 1.368268 | TTTCTTTGGTCCCTGGCCCT | 61.368 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
854 | 871 | 1.269569 | CGTTTTTCTTTGGTCCCTGGC | 60.270 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
855 | 872 | 2.303175 | TCGTTTTTCTTTGGTCCCTGG | 58.697 | 47.619 | 0.00 | 0.00 | 0.00 | 4.45 |
857 | 874 | 4.072839 | GAGATCGTTTTTCTTTGGTCCCT | 58.927 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
858 | 875 | 3.190744 | GGAGATCGTTTTTCTTTGGTCCC | 59.809 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
860 | 877 | 4.613850 | GCAGGAGATCGTTTTTCTTTGGTC | 60.614 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
861 | 878 | 3.253432 | GCAGGAGATCGTTTTTCTTTGGT | 59.747 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
862 | 879 | 3.253188 | TGCAGGAGATCGTTTTTCTTTGG | 59.747 | 43.478 | 0.00 | 0.00 | 0.00 | 3.28 |
864 | 881 | 3.882888 | TGTGCAGGAGATCGTTTTTCTTT | 59.117 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
865 | 882 | 3.251004 | GTGTGCAGGAGATCGTTTTTCTT | 59.749 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
921 | 1009 | 5.312120 | ACTGGTAAACTGTAGTCATCTCG | 57.688 | 43.478 | 0.00 | 0.00 | 0.00 | 4.04 |
1063 | 2711 | 3.083997 | GGACAGGGTCGCCTCCAT | 61.084 | 66.667 | 0.00 | 0.00 | 32.65 | 3.41 |
1249 | 2897 | 1.258445 | ACCTCGATTCCGGCAGAGTT | 61.258 | 55.000 | 0.00 | 0.00 | 36.24 | 3.01 |
1260 | 2908 | 1.033574 | GGATCACGGAGACCTCGATT | 58.966 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
1270 | 2918 | 2.829914 | CGGGTACGGGATCACGGA | 60.830 | 66.667 | 23.42 | 11.33 | 38.39 | 4.69 |
1359 | 3007 | 2.654912 | CGTGGTGGCGTCGAAGAAC | 61.655 | 63.158 | 1.37 | 0.00 | 39.69 | 3.01 |
1473 | 3121 | 4.419939 | AGCTCACGCGCGATGTCA | 62.420 | 61.111 | 39.36 | 14.26 | 42.32 | 3.58 |
1496 | 3144 | 2.613977 | CCTTGGAAGATATAGCAGGGCG | 60.614 | 54.545 | 0.00 | 0.00 | 0.00 | 6.13 |
1629 | 3277 | 1.667830 | CCTCCTCGCGAACTTGCAA | 60.668 | 57.895 | 11.33 | 0.00 | 34.15 | 4.08 |
1686 | 3334 | 0.179140 | GCTCTTGCAGACTCTCCTCG | 60.179 | 60.000 | 0.00 | 0.00 | 39.41 | 4.63 |
1821 | 3469 | 2.930019 | TGGCACAGGGAGACAGGG | 60.930 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
1841 | 3489 | 2.601666 | AGACGTCCAGAGCAGGCA | 60.602 | 61.111 | 13.01 | 0.00 | 0.00 | 4.75 |
2086 | 3734 | 3.560251 | AAGGCACTGGCTGTCCGT | 61.560 | 61.111 | 5.76 | 0.00 | 40.86 | 4.69 |
2169 | 3817 | 4.101448 | GAGCCCCATCCGCAGTGT | 62.101 | 66.667 | 0.00 | 0.00 | 0.00 | 3.55 |
2263 | 3911 | 1.006825 | CCGAGCACGTTCACGATCAA | 61.007 | 55.000 | 6.60 | 0.00 | 43.02 | 2.57 |
2355 | 4003 | 1.141881 | CTGTTCCATCCCGACCTCG | 59.858 | 63.158 | 0.00 | 0.00 | 39.44 | 4.63 |
2585 | 4233 | 3.429410 | GCAAGAAACAGCCCCAATATGTC | 60.429 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
2589 | 4237 | 2.562298 | CAAGCAAGAAACAGCCCCAATA | 59.438 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
2597 | 4245 | 5.443185 | TCTTCCAATCAAGCAAGAAACAG | 57.557 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
2611 | 4259 | 6.182627 | TGCAACATAGTCTTGATCTTCCAAT | 58.817 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2622 | 4270 | 5.835113 | AACAACAGTTGCAACATAGTCTT | 57.165 | 34.783 | 30.11 | 16.03 | 0.00 | 3.01 |
2626 | 4278 | 5.626543 | CAGCTAAACAACAGTTGCAACATAG | 59.373 | 40.000 | 30.11 | 20.82 | 0.00 | 2.23 |
2628 | 4280 | 4.362279 | CAGCTAAACAACAGTTGCAACAT | 58.638 | 39.130 | 30.11 | 15.84 | 0.00 | 2.71 |
2629 | 4281 | 3.768406 | CAGCTAAACAACAGTTGCAACA | 58.232 | 40.909 | 30.11 | 7.06 | 0.00 | 3.33 |
2630 | 4282 | 2.535574 | GCAGCTAAACAACAGTTGCAAC | 59.464 | 45.455 | 22.17 | 22.17 | 46.06 | 4.17 |
2631 | 4283 | 2.808244 | GCAGCTAAACAACAGTTGCAA | 58.192 | 42.857 | 13.56 | 0.00 | 46.06 | 4.08 |
2632 | 4284 | 2.490328 | GCAGCTAAACAACAGTTGCA | 57.510 | 45.000 | 13.56 | 0.00 | 46.06 | 4.08 |
2633 | 4285 | 2.490328 | TGCAGCTAAACAACAGTTGC | 57.510 | 45.000 | 13.56 | 1.28 | 46.71 | 4.17 |
2636 | 4288 | 3.016736 | ACAGTTGCAGCTAAACAACAGT | 58.983 | 40.909 | 21.58 | 18.13 | 46.79 | 3.55 |
2637 | 4289 | 3.181497 | ACACAGTTGCAGCTAAACAACAG | 60.181 | 43.478 | 21.58 | 17.65 | 46.79 | 3.16 |
2639 | 4291 | 3.065371 | AGACACAGTTGCAGCTAAACAAC | 59.935 | 43.478 | 15.17 | 15.17 | 45.15 | 3.32 |
2640 | 4292 | 3.278574 | AGACACAGTTGCAGCTAAACAA | 58.721 | 40.909 | 1.52 | 3.54 | 0.00 | 2.83 |
2642 | 4294 | 2.872245 | TGAGACACAGTTGCAGCTAAAC | 59.128 | 45.455 | 1.52 | 3.75 | 0.00 | 2.01 |
2644 | 4296 | 2.908688 | TGAGACACAGTTGCAGCTAA | 57.091 | 45.000 | 1.52 | 0.00 | 0.00 | 3.09 |
2646 | 4298 | 1.520494 | CATGAGACACAGTTGCAGCT | 58.480 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2648 | 4300 | 0.520404 | GGCATGAGACACAGTTGCAG | 59.480 | 55.000 | 0.00 | 0.00 | 36.55 | 4.41 |
2658 | 4314 | 2.758736 | AGACTGAGTTGGCATGAGAC | 57.241 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2734 | 4390 | 5.818136 | TGCTTATTCAAATGGTAGAGCAC | 57.182 | 39.130 | 0.00 | 0.00 | 34.33 | 4.40 |
2815 | 4471 | 0.478072 | TCACCACTGGCCACAAATCT | 59.522 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2860 | 4516 | 6.183360 | GCTGCCACAAGTCTGATGTATATTTT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
2864 | 4520 | 3.452264 | AGCTGCCACAAGTCTGATGTATA | 59.548 | 43.478 | 0.00 | 0.00 | 0.00 | 1.47 |
2875 | 4531 | 2.076100 | TCATTAACGAGCTGCCACAAG | 58.924 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2890 | 4546 | 6.252599 | AGTAGCCAATCTTGTGGATCATTA | 57.747 | 37.500 | 0.00 | 0.00 | 41.65 | 1.90 |
2897 | 4553 | 2.927553 | GCAAGTAGCCAATCTTGTGG | 57.072 | 50.000 | 0.00 | 0.00 | 41.83 | 4.17 |
2937 | 4593 | 8.480133 | AAGGAGAGAAAACTAGACACTTCTAA | 57.520 | 34.615 | 0.00 | 0.00 | 33.73 | 2.10 |
2940 | 4596 | 6.160684 | GGAAGGAGAGAAAACTAGACACTTC | 58.839 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2941 | 4597 | 5.602978 | TGGAAGGAGAGAAAACTAGACACTT | 59.397 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2942 | 4598 | 5.148502 | TGGAAGGAGAGAAAACTAGACACT | 58.851 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
2990 | 4646 | 4.284178 | AGTCTTCAAATGCCCATTGCTAT | 58.716 | 39.130 | 0.00 | 0.00 | 42.00 | 2.97 |
3144 | 4820 | 8.704849 | TTCCTAAAATTCTGACAGGATCAAAA | 57.295 | 30.769 | 1.81 | 0.00 | 36.69 | 2.44 |
3217 | 4893 | 0.040646 | TTTCCGAGGGAGTAGCAGGA | 59.959 | 55.000 | 0.00 | 0.00 | 31.21 | 3.86 |
3231 | 4907 | 5.525378 | CCTGGTCTCATAGAATTCTTTTCCG | 59.475 | 44.000 | 14.36 | 0.00 | 0.00 | 4.30 |
3232 | 4908 | 6.418946 | ACCTGGTCTCATAGAATTCTTTTCC | 58.581 | 40.000 | 14.36 | 8.65 | 0.00 | 3.13 |
3233 | 4909 | 7.334858 | AGACCTGGTCTCATAGAATTCTTTTC | 58.665 | 38.462 | 23.49 | 0.00 | 38.71 | 2.29 |
3234 | 4910 | 7.264294 | AGACCTGGTCTCATAGAATTCTTTT | 57.736 | 36.000 | 23.49 | 0.00 | 38.71 | 2.27 |
3235 | 4911 | 6.882768 | AGACCTGGTCTCATAGAATTCTTT | 57.117 | 37.500 | 23.49 | 2.41 | 38.71 | 2.52 |
3248 | 4924 | 2.379972 | CTAATCCGTGAGACCTGGTCT | 58.620 | 52.381 | 28.70 | 28.70 | 46.42 | 3.85 |
3249 | 4925 | 1.202428 | GCTAATCCGTGAGACCTGGTC | 60.202 | 57.143 | 19.20 | 19.20 | 0.00 | 4.02 |
3250 | 4926 | 0.824759 | GCTAATCCGTGAGACCTGGT | 59.175 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3251 | 4927 | 0.824109 | TGCTAATCCGTGAGACCTGG | 59.176 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3252 | 4928 | 1.804372 | GCTGCTAATCCGTGAGACCTG | 60.804 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
3253 | 4929 | 0.461961 | GCTGCTAATCCGTGAGACCT | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3254 | 4930 | 0.461961 | AGCTGCTAATCCGTGAGACC | 59.538 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3255 | 4931 | 1.135139 | TCAGCTGCTAATCCGTGAGAC | 59.865 | 52.381 | 9.47 | 0.00 | 0.00 | 3.36 |
3256 | 4932 | 1.406898 | CTCAGCTGCTAATCCGTGAGA | 59.593 | 52.381 | 9.47 | 0.00 | 34.57 | 3.27 |
3257 | 4933 | 1.406898 | TCTCAGCTGCTAATCCGTGAG | 59.593 | 52.381 | 9.47 | 4.09 | 34.06 | 3.51 |
3258 | 4934 | 1.135139 | GTCTCAGCTGCTAATCCGTGA | 59.865 | 52.381 | 9.47 | 0.00 | 0.00 | 4.35 |
3259 | 4935 | 1.134995 | TGTCTCAGCTGCTAATCCGTG | 60.135 | 52.381 | 9.47 | 0.00 | 0.00 | 4.94 |
3260 | 4936 | 1.134965 | GTGTCTCAGCTGCTAATCCGT | 60.135 | 52.381 | 9.47 | 0.00 | 0.00 | 4.69 |
3261 | 4937 | 1.134995 | TGTGTCTCAGCTGCTAATCCG | 60.135 | 52.381 | 9.47 | 0.00 | 0.00 | 4.18 |
3262 | 4938 | 2.680312 | TGTGTCTCAGCTGCTAATCC | 57.320 | 50.000 | 9.47 | 0.00 | 0.00 | 3.01 |
3263 | 4939 | 3.129871 | GGATGTGTCTCAGCTGCTAATC | 58.870 | 50.000 | 9.47 | 6.04 | 32.48 | 1.75 |
3264 | 4940 | 2.770802 | AGGATGTGTCTCAGCTGCTAAT | 59.229 | 45.455 | 9.47 | 0.00 | 32.48 | 1.73 |
3265 | 4941 | 2.093816 | CAGGATGTGTCTCAGCTGCTAA | 60.094 | 50.000 | 9.47 | 0.00 | 32.48 | 3.09 |
3266 | 4942 | 1.479730 | CAGGATGTGTCTCAGCTGCTA | 59.520 | 52.381 | 9.47 | 0.00 | 32.48 | 3.49 |
3267 | 4943 | 0.249676 | CAGGATGTGTCTCAGCTGCT | 59.750 | 55.000 | 9.47 | 0.00 | 32.48 | 4.24 |
3268 | 4944 | 0.248565 | TCAGGATGTGTCTCAGCTGC | 59.751 | 55.000 | 9.47 | 0.00 | 37.40 | 5.25 |
3269 | 4945 | 2.552031 | CATCAGGATGTGTCTCAGCTG | 58.448 | 52.381 | 7.63 | 7.63 | 37.40 | 4.24 |
3270 | 4946 | 1.485480 | CCATCAGGATGTGTCTCAGCT | 59.515 | 52.381 | 8.35 | 0.00 | 37.11 | 4.24 |
3271 | 4947 | 1.483827 | TCCATCAGGATGTGTCTCAGC | 59.516 | 52.381 | 8.35 | 0.00 | 39.61 | 4.26 |
3283 | 4959 | 1.091771 | GCCACGTGTCATCCATCAGG | 61.092 | 60.000 | 15.65 | 0.00 | 0.00 | 3.86 |
3284 | 4960 | 0.391528 | TGCCACGTGTCATCCATCAG | 60.392 | 55.000 | 15.65 | 0.00 | 0.00 | 2.90 |
3285 | 4961 | 0.252761 | ATGCCACGTGTCATCCATCA | 59.747 | 50.000 | 15.65 | 0.00 | 0.00 | 3.07 |
3286 | 4962 | 1.331756 | GAATGCCACGTGTCATCCATC | 59.668 | 52.381 | 13.12 | 3.25 | 0.00 | 3.51 |
3287 | 4963 | 1.339920 | TGAATGCCACGTGTCATCCAT | 60.340 | 47.619 | 13.12 | 0.00 | 0.00 | 3.41 |
3288 | 4964 | 0.036022 | TGAATGCCACGTGTCATCCA | 59.964 | 50.000 | 13.12 | 2.86 | 0.00 | 3.41 |
3289 | 4965 | 0.447801 | GTGAATGCCACGTGTCATCC | 59.552 | 55.000 | 13.12 | 0.00 | 35.86 | 3.51 |
3290 | 4966 | 3.975992 | GTGAATGCCACGTGTCATC | 57.024 | 52.632 | 13.12 | 7.23 | 35.86 | 2.92 |
3298 | 4974 | 3.184986 | GCTTTGTGATTTGTGAATGCCAC | 59.815 | 43.478 | 0.00 | 0.00 | 45.88 | 5.01 |
3299 | 4975 | 3.181468 | TGCTTTGTGATTTGTGAATGCCA | 60.181 | 39.130 | 0.00 | 0.00 | 0.00 | 4.92 |
3300 | 4976 | 3.391965 | TGCTTTGTGATTTGTGAATGCC | 58.608 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
3301 | 4977 | 4.927425 | AGATGCTTTGTGATTTGTGAATGC | 59.073 | 37.500 | 0.00 | 0.00 | 0.00 | 3.56 |
3302 | 4978 | 6.529125 | GGTAGATGCTTTGTGATTTGTGAATG | 59.471 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
3303 | 4979 | 6.350445 | GGGTAGATGCTTTGTGATTTGTGAAT | 60.350 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
3304 | 4980 | 5.048083 | GGGTAGATGCTTTGTGATTTGTGAA | 60.048 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3305 | 4981 | 4.458989 | GGGTAGATGCTTTGTGATTTGTGA | 59.541 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
3306 | 4982 | 4.380867 | GGGGTAGATGCTTTGTGATTTGTG | 60.381 | 45.833 | 0.00 | 0.00 | 0.00 | 3.33 |
3307 | 4983 | 3.763897 | GGGGTAGATGCTTTGTGATTTGT | 59.236 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
3308 | 4984 | 3.763360 | TGGGGTAGATGCTTTGTGATTTG | 59.237 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
3309 | 4985 | 3.763897 | GTGGGGTAGATGCTTTGTGATTT | 59.236 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
3310 | 4986 | 3.356290 | GTGGGGTAGATGCTTTGTGATT | 58.644 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
3311 | 4987 | 2.357154 | GGTGGGGTAGATGCTTTGTGAT | 60.357 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3312 | 4988 | 1.004277 | GGTGGGGTAGATGCTTTGTGA | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
3313 | 4989 | 1.463674 | GGTGGGGTAGATGCTTTGTG | 58.536 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
3314 | 4990 | 0.331616 | GGGTGGGGTAGATGCTTTGT | 59.668 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
3315 | 4991 | 0.395724 | GGGGTGGGGTAGATGCTTTG | 60.396 | 60.000 | 0.00 | 0.00 | 0.00 | 2.77 |
3316 | 4992 | 1.580994 | GGGGGTGGGGTAGATGCTTT | 61.581 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3317 | 4993 | 2.006991 | GGGGGTGGGGTAGATGCTT | 61.007 | 63.158 | 0.00 | 0.00 | 0.00 | 3.91 |
3318 | 4994 | 2.368329 | GGGGGTGGGGTAGATGCT | 60.368 | 66.667 | 0.00 | 0.00 | 0.00 | 3.79 |
3319 | 4995 | 2.694616 | TGGGGGTGGGGTAGATGC | 60.695 | 66.667 | 0.00 | 0.00 | 0.00 | 3.91 |
3320 | 4996 | 2.383601 | GGTGGGGGTGGGGTAGATG | 61.384 | 68.421 | 0.00 | 0.00 | 0.00 | 2.90 |
3321 | 4997 | 2.043941 | GGTGGGGGTGGGGTAGAT | 59.956 | 66.667 | 0.00 | 0.00 | 0.00 | 1.98 |
3322 | 4998 | 3.213245 | AGGTGGGGGTGGGGTAGA | 61.213 | 66.667 | 0.00 | 0.00 | 0.00 | 2.59 |
3323 | 4999 | 3.015145 | CAGGTGGGGGTGGGGTAG | 61.015 | 72.222 | 0.00 | 0.00 | 0.00 | 3.18 |
3324 | 5000 | 2.656269 | TTTCAGGTGGGGGTGGGGTA | 62.656 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3325 | 5001 | 4.542627 | TTCAGGTGGGGGTGGGGT | 62.543 | 66.667 | 0.00 | 0.00 | 0.00 | 4.95 |
3326 | 5002 | 2.514516 | GATTTCAGGTGGGGGTGGGG | 62.515 | 65.000 | 0.00 | 0.00 | 0.00 | 4.96 |
3327 | 5003 | 1.000359 | GATTTCAGGTGGGGGTGGG | 60.000 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
3328 | 5004 | 1.378514 | CGATTTCAGGTGGGGGTGG | 60.379 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
3329 | 5005 | 0.392998 | CTCGATTTCAGGTGGGGGTG | 60.393 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3330 | 5006 | 1.562672 | CCTCGATTTCAGGTGGGGGT | 61.563 | 60.000 | 0.00 | 0.00 | 0.00 | 4.95 |
3331 | 5007 | 1.224592 | CCTCGATTTCAGGTGGGGG | 59.775 | 63.158 | 0.00 | 0.00 | 0.00 | 5.40 |
3332 | 5008 | 1.224592 | CCCTCGATTTCAGGTGGGG | 59.775 | 63.158 | 0.00 | 0.00 | 0.00 | 4.96 |
3333 | 5009 | 1.224592 | CCCCTCGATTTCAGGTGGG | 59.775 | 63.158 | 0.00 | 0.00 | 34.68 | 4.61 |
3334 | 5010 | 1.224592 | CCCCCTCGATTTCAGGTGG | 59.775 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
3335 | 5011 | 4.963878 | CCCCCTCGATTTCAGGTG | 57.036 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
3352 | 5028 | 5.888982 | TCACAAAGTATCTAATCTCCCCC | 57.111 | 43.478 | 0.00 | 0.00 | 0.00 | 5.40 |
3363 | 5039 | 9.586150 | CGTAGCATTCATAAATCACAAAGTATC | 57.414 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3364 | 5040 | 9.109393 | ACGTAGCATTCATAAATCACAAAGTAT | 57.891 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
3365 | 5041 | 8.387354 | CACGTAGCATTCATAAATCACAAAGTA | 58.613 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3366 | 5042 | 7.094805 | ACACGTAGCATTCATAAATCACAAAGT | 60.095 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
3367 | 5043 | 7.243487 | ACACGTAGCATTCATAAATCACAAAG | 58.757 | 34.615 | 0.00 | 0.00 | 0.00 | 2.77 |
3368 | 5044 | 7.095017 | TGACACGTAGCATTCATAAATCACAAA | 60.095 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
3369 | 5045 | 6.370166 | TGACACGTAGCATTCATAAATCACAA | 59.630 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
3370 | 5046 | 5.872070 | TGACACGTAGCATTCATAAATCACA | 59.128 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3371 | 5047 | 6.344572 | TGACACGTAGCATTCATAAATCAC | 57.655 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
3372 | 5048 | 6.202762 | GGATGACACGTAGCATTCATAAATCA | 59.797 | 38.462 | 4.12 | 0.00 | 0.00 | 2.57 |
3373 | 5049 | 6.202762 | TGGATGACACGTAGCATTCATAAATC | 59.797 | 38.462 | 6.68 | 0.00 | 0.00 | 2.17 |
3374 | 5050 | 6.054941 | TGGATGACACGTAGCATTCATAAAT | 58.945 | 36.000 | 6.68 | 0.00 | 0.00 | 1.40 |
3375 | 5051 | 5.423886 | TGGATGACACGTAGCATTCATAAA | 58.576 | 37.500 | 6.68 | 0.00 | 0.00 | 1.40 |
3376 | 5052 | 5.017294 | TGGATGACACGTAGCATTCATAA | 57.983 | 39.130 | 6.68 | 0.00 | 0.00 | 1.90 |
3377 | 5053 | 4.664150 | TGGATGACACGTAGCATTCATA | 57.336 | 40.909 | 6.68 | 0.00 | 0.00 | 2.15 |
3378 | 5054 | 3.541996 | TGGATGACACGTAGCATTCAT | 57.458 | 42.857 | 6.68 | 2.12 | 0.00 | 2.57 |
3379 | 5055 | 3.118811 | TCATGGATGACACGTAGCATTCA | 60.119 | 43.478 | 11.79 | 11.79 | 34.69 | 2.57 |
3380 | 5056 | 3.457234 | TCATGGATGACACGTAGCATTC | 58.543 | 45.455 | 4.12 | 3.06 | 0.00 | 2.67 |
3381 | 5057 | 3.461061 | CTCATGGATGACACGTAGCATT | 58.539 | 45.455 | 4.12 | 0.00 | 32.50 | 3.56 |
3382 | 5058 | 2.224137 | CCTCATGGATGACACGTAGCAT | 60.224 | 50.000 | 2.33 | 2.33 | 34.57 | 3.79 |
3383 | 5059 | 1.136891 | CCTCATGGATGACACGTAGCA | 59.863 | 52.381 | 0.00 | 0.00 | 34.57 | 3.49 |
3384 | 5060 | 1.539065 | CCCTCATGGATGACACGTAGC | 60.539 | 57.143 | 0.00 | 0.00 | 35.39 | 3.58 |
3385 | 5061 | 1.539065 | GCCCTCATGGATGACACGTAG | 60.539 | 57.143 | 0.00 | 0.00 | 35.39 | 3.51 |
3386 | 5062 | 0.464036 | GCCCTCATGGATGACACGTA | 59.536 | 55.000 | 0.00 | 0.00 | 35.39 | 3.57 |
3387 | 5063 | 1.221840 | GCCCTCATGGATGACACGT | 59.778 | 57.895 | 0.00 | 0.00 | 35.39 | 4.49 |
3388 | 5064 | 1.884464 | CGCCCTCATGGATGACACG | 60.884 | 63.158 | 0.00 | 0.00 | 35.39 | 4.49 |
3389 | 5065 | 1.524621 | CCGCCCTCATGGATGACAC | 60.525 | 63.158 | 0.00 | 0.00 | 35.39 | 3.67 |
3390 | 5066 | 2.745308 | CCCGCCCTCATGGATGACA | 61.745 | 63.158 | 0.00 | 0.00 | 35.39 | 3.58 |
3391 | 5067 | 2.111878 | CCCGCCCTCATGGATGAC | 59.888 | 66.667 | 0.00 | 0.00 | 35.39 | 3.06 |
3392 | 5068 | 2.366837 | ACCCGCCCTCATGGATGA | 60.367 | 61.111 | 0.00 | 0.00 | 35.39 | 2.92 |
3393 | 5069 | 2.111878 | GACCCGCCCTCATGGATG | 59.888 | 66.667 | 0.00 | 0.00 | 35.39 | 3.51 |
3394 | 5070 | 2.040464 | AGACCCGCCCTCATGGAT | 60.040 | 61.111 | 0.00 | 0.00 | 35.39 | 3.41 |
3395 | 5071 | 2.764128 | GAGACCCGCCCTCATGGA | 60.764 | 66.667 | 0.00 | 0.00 | 35.39 | 3.41 |
3396 | 5072 | 3.083349 | TGAGACCCGCCCTCATGG | 61.083 | 66.667 | 0.00 | 0.00 | 35.89 | 3.66 |
3397 | 5073 | 2.187946 | GTGAGACCCGCCCTCATG | 59.812 | 66.667 | 0.00 | 0.00 | 41.98 | 3.07 |
3398 | 5074 | 3.083997 | GGTGAGACCCGCCCTCAT | 61.084 | 66.667 | 0.00 | 0.00 | 41.98 | 2.90 |
3399 | 5075 | 4.316823 | AGGTGAGACCCGCCCTCA | 62.317 | 66.667 | 0.00 | 0.00 | 46.65 | 3.86 |
3400 | 5076 | 3.775654 | CAGGTGAGACCCGCCCTC | 61.776 | 72.222 | 0.00 | 0.00 | 46.65 | 4.30 |
3403 | 5079 | 1.972660 | ATTAGCAGGTGAGACCCGCC | 61.973 | 60.000 | 0.00 | 0.00 | 42.60 | 6.13 |
3404 | 5080 | 0.107654 | AATTAGCAGGTGAGACCCGC | 60.108 | 55.000 | 0.00 | 0.00 | 41.94 | 6.13 |
3405 | 5081 | 1.066143 | ACAATTAGCAGGTGAGACCCG | 60.066 | 52.381 | 0.00 | 0.00 | 39.75 | 5.28 |
3406 | 5082 | 2.027192 | TCACAATTAGCAGGTGAGACCC | 60.027 | 50.000 | 0.00 | 0.00 | 39.75 | 4.46 |
3407 | 5083 | 3.334583 | TCACAATTAGCAGGTGAGACC | 57.665 | 47.619 | 0.00 | 0.00 | 36.69 | 3.85 |
3411 | 5087 | 2.906389 | AGGTCTCACAATTAGCAGGTGA | 59.094 | 45.455 | 0.00 | 0.00 | 39.09 | 4.02 |
3412 | 5088 | 3.340814 | AGGTCTCACAATTAGCAGGTG | 57.659 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
3413 | 5089 | 4.097418 | ACTAGGTCTCACAATTAGCAGGT | 58.903 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
3414 | 5090 | 4.404073 | AGACTAGGTCTCACAATTAGCAGG | 59.596 | 45.833 | 0.00 | 0.00 | 38.71 | 4.85 |
3415 | 5091 | 5.590530 | AGACTAGGTCTCACAATTAGCAG | 57.409 | 43.478 | 0.00 | 0.00 | 38.71 | 4.24 |
3447 | 5123 | 1.437397 | ACGGAGGGTGTAGGGAAAAA | 58.563 | 50.000 | 0.00 | 0.00 | 0.00 | 1.94 |
3448 | 5124 | 1.437397 | AACGGAGGGTGTAGGGAAAA | 58.563 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3449 | 5125 | 1.348696 | GAAACGGAGGGTGTAGGGAAA | 59.651 | 52.381 | 0.00 | 0.00 | 0.00 | 3.13 |
3450 | 5126 | 0.978907 | GAAACGGAGGGTGTAGGGAA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 3.97 |
3451 | 5127 | 0.115745 | AGAAACGGAGGGTGTAGGGA | 59.884 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3452 | 5128 | 0.981943 | AAGAAACGGAGGGTGTAGGG | 59.018 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3453 | 5129 | 2.853235 | AAAGAAACGGAGGGTGTAGG | 57.147 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3454 | 5130 | 4.828829 | ACATAAAGAAACGGAGGGTGTAG | 58.171 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
3455 | 5131 | 4.895668 | ACATAAAGAAACGGAGGGTGTA | 57.104 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
3456 | 5132 | 3.782656 | ACATAAAGAAACGGAGGGTGT | 57.217 | 42.857 | 0.00 | 0.00 | 0.00 | 4.16 |
3457 | 5133 | 4.634443 | CCTTACATAAAGAAACGGAGGGTG | 59.366 | 45.833 | 0.00 | 0.00 | 37.38 | 4.61 |
3458 | 5134 | 4.287845 | ACCTTACATAAAGAAACGGAGGGT | 59.712 | 41.667 | 0.00 | 0.00 | 37.38 | 4.34 |
3459 | 5135 | 4.634443 | CACCTTACATAAAGAAACGGAGGG | 59.366 | 45.833 | 0.00 | 0.00 | 37.38 | 4.30 |
3460 | 5136 | 5.243207 | ACACCTTACATAAAGAAACGGAGG | 58.757 | 41.667 | 0.00 | 0.00 | 37.38 | 4.30 |
3461 | 5137 | 8.488651 | AATACACCTTACATAAAGAAACGGAG | 57.511 | 34.615 | 0.00 | 0.00 | 37.38 | 4.63 |
3473 | 5149 | 8.455682 | CCGTGTCAAAAATAATACACCTTACAT | 58.544 | 33.333 | 0.00 | 0.00 | 39.20 | 2.29 |
3474 | 5150 | 7.444792 | ACCGTGTCAAAAATAATACACCTTACA | 59.555 | 33.333 | 0.00 | 0.00 | 39.20 | 2.41 |
3475 | 5151 | 7.747357 | CACCGTGTCAAAAATAATACACCTTAC | 59.253 | 37.037 | 0.00 | 0.00 | 39.20 | 2.34 |
3476 | 5152 | 7.660617 | TCACCGTGTCAAAAATAATACACCTTA | 59.339 | 33.333 | 0.00 | 0.00 | 39.20 | 2.69 |
3477 | 5153 | 6.487331 | TCACCGTGTCAAAAATAATACACCTT | 59.513 | 34.615 | 0.00 | 0.00 | 39.20 | 3.50 |
3478 | 5154 | 5.998981 | TCACCGTGTCAAAAATAATACACCT | 59.001 | 36.000 | 0.00 | 0.00 | 39.20 | 4.00 |
3479 | 5155 | 6.243811 | TCACCGTGTCAAAAATAATACACC | 57.756 | 37.500 | 0.00 | 0.00 | 39.20 | 4.16 |
3480 | 5156 | 7.523219 | TGATCACCGTGTCAAAAATAATACAC | 58.477 | 34.615 | 0.00 | 0.00 | 39.04 | 2.90 |
3481 | 5157 | 7.674471 | TGATCACCGTGTCAAAAATAATACA | 57.326 | 32.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3482 | 5158 | 8.234546 | ACTTGATCACCGTGTCAAAAATAATAC | 58.765 | 33.333 | 13.79 | 0.00 | 34.26 | 1.89 |
3483 | 5159 | 8.330466 | ACTTGATCACCGTGTCAAAAATAATA | 57.670 | 30.769 | 13.79 | 0.00 | 34.26 | 0.98 |
3484 | 5160 | 7.040755 | TGACTTGATCACCGTGTCAAAAATAAT | 60.041 | 33.333 | 13.94 | 0.00 | 35.15 | 1.28 |
3485 | 5161 | 6.261158 | TGACTTGATCACCGTGTCAAAAATAA | 59.739 | 34.615 | 13.94 | 0.36 | 35.15 | 1.40 |
3486 | 5162 | 5.760743 | TGACTTGATCACCGTGTCAAAAATA | 59.239 | 36.000 | 13.94 | 3.72 | 35.15 | 1.40 |
3487 | 5163 | 4.578516 | TGACTTGATCACCGTGTCAAAAAT | 59.421 | 37.500 | 13.94 | 6.43 | 35.15 | 1.82 |
3488 | 5164 | 3.942115 | TGACTTGATCACCGTGTCAAAAA | 59.058 | 39.130 | 13.94 | 4.60 | 35.15 | 1.94 |
3489 | 5165 | 3.536570 | TGACTTGATCACCGTGTCAAAA | 58.463 | 40.909 | 13.94 | 4.83 | 35.15 | 2.44 |
3490 | 5166 | 3.186702 | TGACTTGATCACCGTGTCAAA | 57.813 | 42.857 | 13.94 | 2.05 | 35.15 | 2.69 |
3491 | 5167 | 2.900716 | TGACTTGATCACCGTGTCAA | 57.099 | 45.000 | 13.94 | 12.80 | 35.15 | 3.18 |
3500 | 5176 | 8.675705 | TTCTCTAAAATTGTGTGACTTGATCA | 57.324 | 30.769 | 0.00 | 0.00 | 33.79 | 2.92 |
3501 | 5177 | 8.778358 | ACTTCTCTAAAATTGTGTGACTTGATC | 58.222 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
3502 | 5178 | 8.682936 | ACTTCTCTAAAATTGTGTGACTTGAT | 57.317 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
3503 | 5179 | 8.506168 | AACTTCTCTAAAATTGTGTGACTTGA | 57.494 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
3506 | 5182 | 9.778741 | TCATAACTTCTCTAAAATTGTGTGACT | 57.221 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
3507 | 5183 | 9.813080 | GTCATAACTTCTCTAAAATTGTGTGAC | 57.187 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
3508 | 5184 | 8.708742 | CGTCATAACTTCTCTAAAATTGTGTGA | 58.291 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
3509 | 5185 | 8.708742 | TCGTCATAACTTCTCTAAAATTGTGTG | 58.291 | 33.333 | 0.00 | 0.00 | 0.00 | 3.82 |
3510 | 5186 | 8.827177 | TCGTCATAACTTCTCTAAAATTGTGT | 57.173 | 30.769 | 0.00 | 0.00 | 0.00 | 3.72 |
3517 | 5193 | 9.374838 | GGGTAATTTCGTCATAACTTCTCTAAA | 57.625 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
3518 | 5194 | 8.755977 | AGGGTAATTTCGTCATAACTTCTCTAA | 58.244 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
3519 | 5195 | 8.302515 | AGGGTAATTTCGTCATAACTTCTCTA | 57.697 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
3520 | 5196 | 7.184067 | AGGGTAATTTCGTCATAACTTCTCT | 57.816 | 36.000 | 0.00 | 0.00 | 0.00 | 3.10 |
3521 | 5197 | 7.201617 | CCAAGGGTAATTTCGTCATAACTTCTC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 2.87 |
3522 | 5198 | 6.598064 | CCAAGGGTAATTTCGTCATAACTTCT | 59.402 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
3523 | 5199 | 6.596497 | TCCAAGGGTAATTTCGTCATAACTTC | 59.404 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
3524 | 5200 | 6.478129 | TCCAAGGGTAATTTCGTCATAACTT | 58.522 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3525 | 5201 | 6.057321 | TCCAAGGGTAATTTCGTCATAACT | 57.943 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
3526 | 5202 | 6.746745 | TTCCAAGGGTAATTTCGTCATAAC | 57.253 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
3527 | 5203 | 7.762588 | TTTTCCAAGGGTAATTTCGTCATAA | 57.237 | 32.000 | 0.00 | 0.00 | 0.00 | 1.90 |
3528 | 5204 | 7.832187 | AGATTTTCCAAGGGTAATTTCGTCATA | 59.168 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
3529 | 5205 | 6.663523 | AGATTTTCCAAGGGTAATTTCGTCAT | 59.336 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
3530 | 5206 | 6.007703 | AGATTTTCCAAGGGTAATTTCGTCA | 58.992 | 36.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3531 | 5207 | 6.072119 | ACAGATTTTCCAAGGGTAATTTCGTC | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 4.20 |
3532 | 5208 | 5.773176 | ACAGATTTTCCAAGGGTAATTTCGT | 59.227 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3533 | 5209 | 6.267496 | ACAGATTTTCCAAGGGTAATTTCG | 57.733 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
3534 | 5210 | 6.368791 | GCAACAGATTTTCCAAGGGTAATTTC | 59.631 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
3535 | 5211 | 6.043127 | AGCAACAGATTTTCCAAGGGTAATTT | 59.957 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
3536 | 5212 | 5.543790 | AGCAACAGATTTTCCAAGGGTAATT | 59.456 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3537 | 5213 | 5.086621 | AGCAACAGATTTTCCAAGGGTAAT | 58.913 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
3538 | 5214 | 4.479158 | AGCAACAGATTTTCCAAGGGTAA | 58.521 | 39.130 | 0.00 | 0.00 | 0.00 | 2.85 |
3539 | 5215 | 4.112634 | AGCAACAGATTTTCCAAGGGTA | 57.887 | 40.909 | 0.00 | 0.00 | 0.00 | 3.69 |
3540 | 5216 | 2.962859 | AGCAACAGATTTTCCAAGGGT | 58.037 | 42.857 | 0.00 | 0.00 | 0.00 | 4.34 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.