Multiple sequence alignment - TraesCS2B01G395000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G395000 chr2B 100.000 3434 0 0 1 3434 559908859 559912292 0.000000e+00 6342.0
1 TraesCS2B01G395000 chr2B 82.278 395 58 8 3030 3419 374683371 374683758 7.100000e-87 331.0
2 TraesCS2B01G395000 chr2D 96.503 1687 54 5 762 2444 477830813 477832498 0.000000e+00 2784.0
3 TraesCS2B01G395000 chr2D 87.789 475 52 5 2955 3425 477832769 477833241 5.010000e-153 551.0
4 TraesCS2B01G395000 chr2D 81.566 396 56 10 3029 3419 306488269 306488652 9.250000e-81 311.0
5 TraesCS2B01G395000 chr2D 88.679 265 16 6 278 542 477827190 477827440 9.250000e-81 311.0
6 TraesCS2B01G395000 chr2D 87.013 231 25 2 2669 2894 591268735 591268965 4.400000e-64 255.0
7 TraesCS2B01G395000 chr2D 92.308 52 3 1 210 260 477827150 477827201 4.750000e-09 73.1
8 TraesCS2B01G395000 chr2A 95.379 1623 72 3 825 2444 620711343 620712965 0.000000e+00 2579.0
9 TraesCS2B01G395000 chr2A 88.529 401 41 4 2895 3291 620713146 620713545 6.670000e-132 481.0
10 TraesCS2B01G395000 chr2A 88.034 234 22 2 2669 2896 98897641 98897408 4.370000e-69 272.0
11 TraesCS2B01G395000 chr2A 89.894 188 10 3 2469 2655 620712956 620713135 2.060000e-57 233.0
12 TraesCS2B01G395000 chr2A 92.188 128 10 0 133 260 620703035 620703162 7.570000e-42 182.0
13 TraesCS2B01G395000 chr2A 90.299 134 10 3 4 135 372378806 372378674 4.560000e-39 172.0
14 TraesCS2B01G395000 chr4A 84.127 378 40 9 3052 3422 538208105 538208469 7.050000e-92 348.0
15 TraesCS2B01G395000 chr4A 84.153 183 26 3 3052 3232 586386244 586386063 1.270000e-39 174.0
16 TraesCS2B01G395000 chr5B 84.457 341 38 7 3029 3367 327747757 327748084 4.280000e-84 322.0
17 TraesCS2B01G395000 chr5B 89.944 179 18 0 3243 3421 327748115 327748293 7.410000e-57 231.0
18 TraesCS2B01G395000 chr6D 88.393 224 20 3 2677 2894 9831049 9830826 7.310000e-67 265.0
19 TraesCS2B01G395000 chr6D 90.984 122 9 2 6 127 428601204 428601323 2.740000e-36 163.0
20 TraesCS2B01G395000 chr1B 87.773 229 23 2 2669 2893 659950830 659950603 2.630000e-66 263.0
21 TraesCS2B01G395000 chr7A 87.391 230 25 1 2669 2894 437074600 437074371 9.450000e-66 261.0
22 TraesCS2B01G395000 chr7A 85.950 121 16 1 4 124 79552212 79552093 1.000000e-25 128.0
23 TraesCS2B01G395000 chr3D 87.946 224 23 1 2669 2888 553334029 553334252 9.450000e-66 261.0
24 TraesCS2B01G395000 chr3D 87.665 227 23 2 2669 2891 581095863 581095638 3.400000e-65 259.0
25 TraesCS2B01G395000 chr3D 85.075 134 16 4 6 136 477640473 477640341 2.150000e-27 134.0
26 TraesCS2B01G395000 chrUn 87.611 226 24 1 2669 2890 38971798 38971573 3.400000e-65 259.0
27 TraesCS2B01G395000 chr3B 87.336 229 25 1 2669 2893 606205218 606204990 3.400000e-65 259.0
28 TraesCS2B01G395000 chr3B 89.431 123 11 2 4 126 229508382 229508262 1.650000e-33 154.0
29 TraesCS2B01G395000 chr6B 83.268 257 29 8 3169 3425 47985403 47985161 1.240000e-54 224.0
30 TraesCS2B01G395000 chr4D 89.431 123 9 3 4 125 485691679 485691798 5.940000e-33 152.0
31 TraesCS2B01G395000 chr3A 89.344 122 11 2 4 125 433996493 433996374 5.940000e-33 152.0
32 TraesCS2B01G395000 chr6A 86.047 129 17 1 1 129 60189869 60189742 1.660000e-28 137.0
33 TraesCS2B01G395000 chr5D 85.246 122 15 3 4 125 447098546 447098428 4.650000e-24 122.0
34 TraesCS2B01G395000 chr7D 73.387 372 78 13 3036 3401 442765043 442765399 6.020000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G395000 chr2B 559908859 559912292 3433 False 6342.000000 6342 100.000000 1 3434 1 chr2B.!!$F2 3433
1 TraesCS2B01G395000 chr2D 477827150 477833241 6091 False 929.775000 2784 91.319750 210 3425 4 chr2D.!!$F3 3215
2 TraesCS2B01G395000 chr2A 620711343 620713545 2202 False 1097.666667 2579 91.267333 825 3291 3 chr2A.!!$F2 2466
3 TraesCS2B01G395000 chr5B 327747757 327748293 536 False 276.500000 322 87.200500 3029 3421 2 chr5B.!!$F1 392

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
600 602 0.034896 ACGAACGAACATTCCAGGCT 59.965 50.0 0.14 0.0 0.00 4.58 F
1452 4671 0.838122 AGCACCTCTACAGGCAAGGT 60.838 55.0 0.00 0.0 45.05 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1945 5164 0.040157 CCGTCGGTGTTCTCACGTAA 60.040 55.0 2.08 0.0 44.68 3.18 R
3367 6808 0.037590 TGGTGGAGATTTGTTCCGGG 59.962 55.0 0.00 0.0 37.54 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.970639 GCTCAGTCCTACGTGGCA 59.029 61.111 0.00 0.00 35.26 4.92
18 19 1.517832 GCTCAGTCCTACGTGGCAT 59.482 57.895 0.00 0.00 35.26 4.40
19 20 0.744874 GCTCAGTCCTACGTGGCATA 59.255 55.000 0.00 0.00 35.26 3.14
20 21 1.136305 GCTCAGTCCTACGTGGCATAA 59.864 52.381 0.00 0.00 35.26 1.90
21 22 2.418197 GCTCAGTCCTACGTGGCATAAA 60.418 50.000 0.00 0.00 35.26 1.40
22 23 3.857052 CTCAGTCCTACGTGGCATAAAA 58.143 45.455 0.00 0.00 35.26 1.52
23 24 4.250464 CTCAGTCCTACGTGGCATAAAAA 58.750 43.478 0.00 0.00 35.26 1.94
44 45 6.418057 AAAATCTGGTAAAACATGCCAAGA 57.582 33.333 0.00 0.00 43.83 3.02
45 46 6.610075 AAATCTGGTAAAACATGCCAAGAT 57.390 33.333 0.00 0.00 43.83 2.40
46 47 6.610075 AATCTGGTAAAACATGCCAAGATT 57.390 33.333 0.00 1.30 43.83 2.40
47 48 5.643379 TCTGGTAAAACATGCCAAGATTC 57.357 39.130 0.00 0.00 43.83 2.52
48 49 4.155826 TCTGGTAAAACATGCCAAGATTCG 59.844 41.667 0.00 0.00 43.83 3.34
49 50 3.823873 TGGTAAAACATGCCAAGATTCGT 59.176 39.130 0.00 0.00 41.29 3.85
50 51 4.165779 GGTAAAACATGCCAAGATTCGTG 58.834 43.478 0.00 0.00 33.24 4.35
51 52 2.352503 AAACATGCCAAGATTCGTGC 57.647 45.000 0.00 0.00 0.00 5.34
52 53 1.246649 AACATGCCAAGATTCGTGCA 58.753 45.000 0.00 0.00 38.23 4.57
53 54 1.246649 ACATGCCAAGATTCGTGCAA 58.753 45.000 0.00 0.00 37.27 4.08
54 55 1.612950 ACATGCCAAGATTCGTGCAAA 59.387 42.857 0.00 0.00 37.27 3.68
55 56 2.231964 ACATGCCAAGATTCGTGCAAAT 59.768 40.909 0.00 0.00 37.27 2.32
56 57 3.443329 ACATGCCAAGATTCGTGCAAATA 59.557 39.130 0.00 0.00 37.27 1.40
57 58 3.485947 TGCCAAGATTCGTGCAAATAC 57.514 42.857 0.00 0.00 0.00 1.89
58 59 2.816672 TGCCAAGATTCGTGCAAATACA 59.183 40.909 0.00 0.00 0.00 2.29
59 60 3.254411 TGCCAAGATTCGTGCAAATACAA 59.746 39.130 0.00 0.00 0.00 2.41
60 61 4.233789 GCCAAGATTCGTGCAAATACAAA 58.766 39.130 0.00 0.00 0.00 2.83
61 62 4.089923 GCCAAGATTCGTGCAAATACAAAC 59.910 41.667 0.00 0.00 0.00 2.93
62 63 4.320690 CCAAGATTCGTGCAAATACAAACG 59.679 41.667 0.00 0.00 37.38 3.60
63 64 4.078363 AGATTCGTGCAAATACAAACGG 57.922 40.909 0.00 0.00 36.70 4.44
64 65 3.749088 AGATTCGTGCAAATACAAACGGA 59.251 39.130 0.00 0.00 36.70 4.69
65 66 2.953640 TCGTGCAAATACAAACGGAC 57.046 45.000 0.00 0.00 36.70 4.79
66 67 1.192757 TCGTGCAAATACAAACGGACG 59.807 47.619 0.00 0.00 43.43 4.79
67 68 1.070443 CGTGCAAATACAAACGGACGT 60.070 47.619 0.00 0.00 38.24 4.34
68 69 2.600320 CGTGCAAATACAAACGGACGTT 60.600 45.455 3.99 3.99 38.24 3.99
69 70 2.717011 GTGCAAATACAAACGGACGTTG 59.283 45.455 11.12 7.94 38.47 4.10
70 71 2.612672 TGCAAATACAAACGGACGTTGA 59.387 40.909 11.12 0.54 38.47 3.18
71 72 3.251245 TGCAAATACAAACGGACGTTGAT 59.749 39.130 11.12 5.11 38.47 2.57
72 73 3.844099 GCAAATACAAACGGACGTTGATC 59.156 43.478 11.12 0.00 38.47 2.92
73 74 4.399978 CAAATACAAACGGACGTTGATCC 58.600 43.478 11.12 0.00 38.47 3.36
74 75 2.816204 TACAAACGGACGTTGATCCA 57.184 45.000 11.12 0.00 38.87 3.41
75 76 2.178912 ACAAACGGACGTTGATCCAT 57.821 45.000 11.12 0.00 38.87 3.41
76 77 1.804151 ACAAACGGACGTTGATCCATG 59.196 47.619 11.12 6.97 38.87 3.66
77 78 0.802494 AAACGGACGTTGATCCATGC 59.198 50.000 11.12 0.00 38.87 4.06
78 79 1.358725 AACGGACGTTGATCCATGCG 61.359 55.000 9.52 0.00 38.87 4.73
79 80 1.809619 CGGACGTTGATCCATGCGT 60.810 57.895 0.00 0.00 38.87 5.24
80 81 1.715585 GGACGTTGATCCATGCGTG 59.284 57.895 0.00 0.00 38.77 5.34
81 82 1.019278 GGACGTTGATCCATGCGTGT 61.019 55.000 4.96 0.00 38.77 4.49
82 83 0.095245 GACGTTGATCCATGCGTGTG 59.905 55.000 4.96 0.00 37.71 3.82
83 84 1.298157 ACGTTGATCCATGCGTGTGG 61.298 55.000 4.96 0.40 40.76 4.17
97 98 2.105323 GTGTGGACGAGTTGCAAAAG 57.895 50.000 0.00 0.00 0.00 2.27
98 99 1.400494 GTGTGGACGAGTTGCAAAAGT 59.600 47.619 0.00 0.91 0.00 2.66
99 100 1.400142 TGTGGACGAGTTGCAAAAGTG 59.600 47.619 0.00 0.00 0.00 3.16
108 109 3.024043 GCAAAAGTGCCACACGCG 61.024 61.111 3.53 3.53 45.68 6.01
109 110 2.407210 CAAAAGTGCCACACGCGT 59.593 55.556 5.58 5.58 42.08 6.01
110 111 1.938814 CAAAAGTGCCACACGCGTG 60.939 57.895 35.99 35.99 42.08 5.34
118 119 3.773630 CACACGCGTGGCCGTTAG 61.774 66.667 39.21 15.50 39.83 2.34
119 120 4.289245 ACACGCGTGGCCGTTAGT 62.289 61.111 39.21 16.26 39.83 2.24
120 121 2.126385 CACGCGTGGCCGTTAGTA 60.126 61.111 31.15 0.00 39.83 1.82
121 122 1.517694 CACGCGTGGCCGTTAGTAT 60.518 57.895 31.15 0.00 39.83 2.12
122 123 1.079875 CACGCGTGGCCGTTAGTATT 61.080 55.000 31.15 0.00 39.83 1.89
123 124 0.390209 ACGCGTGGCCGTTAGTATTT 60.390 50.000 12.93 0.00 38.47 1.40
124 125 0.722848 CGCGTGGCCGTTAGTATTTT 59.277 50.000 0.00 0.00 36.15 1.82
125 126 1.267186 CGCGTGGCCGTTAGTATTTTC 60.267 52.381 0.00 0.00 36.15 2.29
126 127 1.267186 GCGTGGCCGTTAGTATTTTCG 60.267 52.381 0.00 0.00 36.15 3.46
127 128 1.994779 CGTGGCCGTTAGTATTTTCGT 59.005 47.619 0.00 0.00 0.00 3.85
128 129 3.178267 CGTGGCCGTTAGTATTTTCGTA 58.822 45.455 0.00 0.00 0.00 3.43
129 130 3.798337 CGTGGCCGTTAGTATTTTCGTAT 59.202 43.478 0.00 0.00 0.00 3.06
130 131 4.268405 CGTGGCCGTTAGTATTTTCGTATT 59.732 41.667 0.00 0.00 0.00 1.89
131 132 5.458452 CGTGGCCGTTAGTATTTTCGTATTA 59.542 40.000 0.00 0.00 0.00 0.98
132 133 6.144402 CGTGGCCGTTAGTATTTTCGTATTAT 59.856 38.462 0.00 0.00 0.00 1.28
133 134 7.306749 CGTGGCCGTTAGTATTTTCGTATTATT 60.307 37.037 0.00 0.00 0.00 1.40
134 135 8.977505 GTGGCCGTTAGTATTTTCGTATTATTA 58.022 33.333 0.00 0.00 0.00 0.98
135 136 9.709495 TGGCCGTTAGTATTTTCGTATTATTAT 57.291 29.630 0.00 0.00 0.00 1.28
156 157 8.905103 ATTATTATTGACGTAAACCTTGTTGC 57.095 30.769 0.00 0.00 0.00 4.17
157 158 2.741122 TTGACGTAAACCTTGTTGCG 57.259 45.000 0.00 0.00 41.62 4.85
160 161 1.654317 ACGTAAACCTTGTTGCGTCA 58.346 45.000 0.00 0.00 44.89 4.35
161 162 1.328374 ACGTAAACCTTGTTGCGTCAC 59.672 47.619 0.00 0.00 44.89 3.67
162 163 1.333435 CGTAAACCTTGTTGCGTCACC 60.333 52.381 0.00 0.00 32.74 4.02
163 164 1.002142 GTAAACCTTGTTGCGTCACCC 60.002 52.381 0.00 0.00 0.00 4.61
164 165 1.720694 AAACCTTGTTGCGTCACCCG 61.721 55.000 0.00 0.00 40.40 5.28
165 166 2.590575 CCTTGTTGCGTCACCCGT 60.591 61.111 0.00 0.00 39.32 5.28
166 167 2.184167 CCTTGTTGCGTCACCCGTT 61.184 57.895 0.00 0.00 39.32 4.44
167 168 0.881159 CCTTGTTGCGTCACCCGTTA 60.881 55.000 0.00 0.00 39.32 3.18
168 169 0.938713 CTTGTTGCGTCACCCGTTAA 59.061 50.000 0.00 0.00 39.32 2.01
169 170 0.938713 TTGTTGCGTCACCCGTTAAG 59.061 50.000 0.00 0.00 39.32 1.85
170 171 0.179078 TGTTGCGTCACCCGTTAAGT 60.179 50.000 0.00 0.00 39.32 2.24
171 172 0.233848 GTTGCGTCACCCGTTAAGTG 59.766 55.000 0.00 0.00 39.32 3.16
172 173 0.104487 TTGCGTCACCCGTTAAGTGA 59.896 50.000 0.00 0.00 41.84 3.41
173 174 0.319083 TGCGTCACCCGTTAAGTGAT 59.681 50.000 0.00 0.00 45.45 3.06
174 175 0.997196 GCGTCACCCGTTAAGTGATC 59.003 55.000 0.00 0.00 45.45 2.92
175 176 1.403780 GCGTCACCCGTTAAGTGATCT 60.404 52.381 0.00 0.00 45.45 2.75
176 177 2.259618 CGTCACCCGTTAAGTGATCTG 58.740 52.381 0.00 0.00 45.45 2.90
177 178 2.000447 GTCACCCGTTAAGTGATCTGC 59.000 52.381 0.00 0.00 45.45 4.26
178 179 1.899814 TCACCCGTTAAGTGATCTGCT 59.100 47.619 0.00 0.00 39.29 4.24
179 180 2.301870 TCACCCGTTAAGTGATCTGCTT 59.698 45.455 7.91 7.91 39.29 3.91
180 181 2.416547 CACCCGTTAAGTGATCTGCTTG 59.583 50.000 11.58 0.63 37.42 4.01
181 182 2.009774 CCCGTTAAGTGATCTGCTTGG 58.990 52.381 11.58 6.13 0.00 3.61
182 183 2.354704 CCCGTTAAGTGATCTGCTTGGA 60.355 50.000 11.58 1.08 0.00 3.53
183 184 2.673368 CCGTTAAGTGATCTGCTTGGAC 59.327 50.000 11.58 9.48 0.00 4.02
184 185 2.673368 CGTTAAGTGATCTGCTTGGACC 59.327 50.000 11.58 0.00 0.00 4.46
185 186 2.672961 TAAGTGATCTGCTTGGACCG 57.327 50.000 11.58 0.00 0.00 4.79
186 187 0.036010 AAGTGATCTGCTTGGACCGG 60.036 55.000 0.00 0.00 0.00 5.28
187 188 1.450312 GTGATCTGCTTGGACCGGG 60.450 63.158 6.32 0.00 0.00 5.73
188 189 2.190578 GATCTGCTTGGACCGGGG 59.809 66.667 6.32 0.00 0.00 5.73
189 190 2.610859 ATCTGCTTGGACCGGGGT 60.611 61.111 6.32 0.00 0.00 4.95
190 191 2.876368 GATCTGCTTGGACCGGGGTG 62.876 65.000 6.32 0.00 0.00 4.61
191 192 3.636231 CTGCTTGGACCGGGGTGA 61.636 66.667 6.32 0.00 0.00 4.02
192 193 3.901797 CTGCTTGGACCGGGGTGAC 62.902 68.421 6.32 0.00 0.00 3.67
205 206 4.295119 GTGACCCGACAGCCGTGT 62.295 66.667 0.00 0.00 40.71 4.49
260 262 1.886542 GGCCTGAAGTACAACTTTGGG 59.113 52.381 0.00 9.63 38.80 4.12
261 263 2.488347 GGCCTGAAGTACAACTTTGGGA 60.488 50.000 0.00 0.00 38.80 4.37
262 264 3.421844 GCCTGAAGTACAACTTTGGGAT 58.578 45.455 12.83 0.00 38.80 3.85
263 265 3.440522 GCCTGAAGTACAACTTTGGGATC 59.559 47.826 12.83 0.00 38.80 3.36
264 266 4.010349 CCTGAAGTACAACTTTGGGATCC 58.990 47.826 1.92 1.92 38.80 3.36
265 267 4.263506 CCTGAAGTACAACTTTGGGATCCT 60.264 45.833 12.58 0.00 38.80 3.24
266 268 4.906618 TGAAGTACAACTTTGGGATCCTC 58.093 43.478 12.58 2.25 38.80 3.71
267 269 4.349636 TGAAGTACAACTTTGGGATCCTCA 59.650 41.667 12.58 5.20 38.80 3.86
268 270 4.993705 AGTACAACTTTGGGATCCTCAA 57.006 40.909 12.58 11.38 0.00 3.02
269 271 5.319043 AGTACAACTTTGGGATCCTCAAA 57.681 39.130 20.51 20.51 33.67 2.69
270 272 5.701224 AGTACAACTTTGGGATCCTCAAAA 58.299 37.500 21.46 14.79 34.26 2.44
271 273 6.133356 AGTACAACTTTGGGATCCTCAAAAA 58.867 36.000 21.46 12.94 34.26 1.94
312 314 9.132923 TGGAATTGTACTACTCGATCTAAGAAT 57.867 33.333 0.00 0.00 0.00 2.40
319 321 7.447374 ACTACTCGATCTAAGAATGGATCTG 57.553 40.000 0.00 0.00 40.40 2.90
330 332 8.055790 TCTAAGAATGGATCTGAGTTCTGACTA 58.944 37.037 0.00 0.00 37.82 2.59
346 348 3.687125 TGACTATTCTCGTGGTCAGAGT 58.313 45.455 0.00 0.00 35.10 3.24
370 372 4.805231 CGGCCGGACATGCACGTA 62.805 66.667 20.10 0.00 0.00 3.57
371 373 2.890474 GGCCGGACATGCACGTAG 60.890 66.667 5.05 0.00 0.00 3.51
372 374 2.890474 GCCGGACATGCACGTAGG 60.890 66.667 5.05 2.88 0.00 3.18
373 375 2.889617 CCGGACATGCACGTAGGA 59.110 61.111 0.00 0.00 0.00 2.94
402 404 2.427095 TGTGTCCACGATGTCCTCATAG 59.573 50.000 0.00 0.00 34.06 2.23
434 436 2.159920 CGATCAAGCAACTCGTTGACAG 60.160 50.000 13.57 2.47 42.93 3.51
449 451 0.890683 GACAGTTTGGCCTTCCATGG 59.109 55.000 4.97 4.97 43.05 3.66
460 462 2.608623 CCTTCCATGGGTTTTCCTGTT 58.391 47.619 13.02 0.00 40.46 3.16
477 479 6.008696 TCCTGTTGGTTCCTTCTAAAGAAA 57.991 37.500 0.00 0.00 32.20 2.52
479 481 7.751646 TCCTGTTGGTTCCTTCTAAAGAAATA 58.248 34.615 0.00 0.00 32.20 1.40
480 482 7.883311 TCCTGTTGGTTCCTTCTAAAGAAATAG 59.117 37.037 0.00 0.00 32.20 1.73
484 486 9.722184 GTTGGTTCCTTCTAAAGAAATAGTACT 57.278 33.333 0.00 0.00 33.07 2.73
490 492 9.118300 TCCTTCTAAAGAAATAGTACTACTCCG 57.882 37.037 4.31 0.00 33.07 4.63
491 493 7.861872 CCTTCTAAAGAAATAGTACTACTCCGC 59.138 40.741 4.31 0.00 33.07 5.54
492 494 7.870509 TCTAAAGAAATAGTACTACTCCGCA 57.129 36.000 4.31 0.00 0.00 5.69
493 495 7.928103 TCTAAAGAAATAGTACTACTCCGCAG 58.072 38.462 4.31 3.16 0.00 5.18
494 496 6.527057 AAAGAAATAGTACTACTCCGCAGT 57.473 37.500 4.31 0.00 36.55 4.40
506 508 5.638234 ACTACTCCGCAGTCTAAAACAAATC 59.362 40.000 0.00 0.00 33.62 2.17
507 509 3.751698 ACTCCGCAGTCTAAAACAAATCC 59.248 43.478 0.00 0.00 0.00 3.01
509 511 4.331968 TCCGCAGTCTAAAACAAATCCAT 58.668 39.130 0.00 0.00 0.00 3.41
518 520 3.947910 AAACAAATCCATGCAGTCTGG 57.052 42.857 1.14 0.00 34.93 3.86
519 521 2.592102 ACAAATCCATGCAGTCTGGT 57.408 45.000 4.77 0.00 35.19 4.00
536 538 3.767673 TCTGGTAGCGAGAAAATGGTACT 59.232 43.478 0.00 0.00 38.69 2.73
537 539 4.113354 CTGGTAGCGAGAAAATGGTACTC 58.887 47.826 0.00 0.00 38.69 2.59
544 546 5.131168 CGAGAAAATGGTACTCGTCAATG 57.869 43.478 0.00 0.00 45.23 2.82
554 556 1.336795 ACTCGTCAATGTCGTCATGCA 60.337 47.619 0.00 0.00 34.19 3.96
555 557 1.929169 CTCGTCAATGTCGTCATGCAT 59.071 47.619 0.00 0.00 34.19 3.96
562 564 5.178067 GTCAATGTCGTCATGCATCATATCA 59.822 40.000 0.00 0.00 34.19 2.15
566 568 3.735746 GTCGTCATGCATCATATCAACGA 59.264 43.478 0.00 1.39 0.00 3.85
567 569 3.983344 TCGTCATGCATCATATCAACGAG 59.017 43.478 0.00 0.00 0.00 4.18
568 570 3.983344 CGTCATGCATCATATCAACGAGA 59.017 43.478 0.00 0.00 0.00 4.04
569 571 4.089636 CGTCATGCATCATATCAACGAGAG 59.910 45.833 0.00 0.00 0.00 3.20
570 572 5.225642 GTCATGCATCATATCAACGAGAGA 58.774 41.667 0.00 0.00 0.00 3.10
573 575 6.367969 TCATGCATCATATCAACGAGAGAATG 59.632 38.462 0.00 0.00 0.00 2.67
575 577 4.391216 GCATCATATCAACGAGAGAATGGG 59.609 45.833 0.00 0.00 0.00 4.00
576 578 3.995199 TCATATCAACGAGAGAATGGGC 58.005 45.455 0.00 0.00 0.00 5.36
577 579 3.387699 TCATATCAACGAGAGAATGGGCA 59.612 43.478 0.00 0.00 0.00 5.36
578 580 2.787473 ATCAACGAGAGAATGGGCAA 57.213 45.000 0.00 0.00 0.00 4.52
580 582 2.426522 TCAACGAGAGAATGGGCAAAG 58.573 47.619 0.00 0.00 0.00 2.77
581 583 2.038426 TCAACGAGAGAATGGGCAAAGA 59.962 45.455 0.00 0.00 0.00 2.52
583 585 1.002366 CGAGAGAATGGGCAAAGACG 58.998 55.000 0.00 0.00 0.00 4.18
585 587 2.699954 GAGAGAATGGGCAAAGACGAA 58.300 47.619 0.00 0.00 0.00 3.85
586 588 2.416893 GAGAGAATGGGCAAAGACGAAC 59.583 50.000 0.00 0.00 0.00 3.95
587 589 1.128692 GAGAATGGGCAAAGACGAACG 59.871 52.381 0.00 0.00 0.00 3.95
588 590 1.153353 GAATGGGCAAAGACGAACGA 58.847 50.000 0.14 0.00 0.00 3.85
589 591 1.533731 GAATGGGCAAAGACGAACGAA 59.466 47.619 0.14 0.00 0.00 3.85
590 592 0.872388 ATGGGCAAAGACGAACGAAC 59.128 50.000 0.14 0.00 0.00 3.95
591 593 0.462225 TGGGCAAAGACGAACGAACA 60.462 50.000 0.14 0.00 0.00 3.18
595 597 2.571206 GCAAAGACGAACGAACATTCC 58.429 47.619 0.14 0.00 0.00 3.01
596 598 2.032377 GCAAAGACGAACGAACATTCCA 60.032 45.455 0.14 0.00 0.00 3.53
598 600 2.080286 AGACGAACGAACATTCCAGG 57.920 50.000 0.14 0.00 0.00 4.45
599 601 0.442699 GACGAACGAACATTCCAGGC 59.557 55.000 0.14 0.00 0.00 4.85
600 602 0.034896 ACGAACGAACATTCCAGGCT 59.965 50.000 0.14 0.00 0.00 4.58
601 603 1.274167 ACGAACGAACATTCCAGGCTA 59.726 47.619 0.14 0.00 0.00 3.93
602 604 2.289195 ACGAACGAACATTCCAGGCTAA 60.289 45.455 0.14 0.00 0.00 3.09
604 606 3.001330 CGAACGAACATTCCAGGCTAATC 59.999 47.826 0.00 0.00 0.00 1.75
605 607 3.914426 ACGAACATTCCAGGCTAATCT 57.086 42.857 0.00 0.00 0.00 2.40
606 608 3.535561 ACGAACATTCCAGGCTAATCTG 58.464 45.455 0.00 0.00 34.70 2.90
607 609 3.197766 ACGAACATTCCAGGCTAATCTGA 59.802 43.478 0.00 0.00 36.93 3.27
608 610 4.141620 ACGAACATTCCAGGCTAATCTGAT 60.142 41.667 0.00 0.00 36.93 2.90
609 611 4.818546 CGAACATTCCAGGCTAATCTGATT 59.181 41.667 8.14 8.14 36.93 2.57
610 612 5.991606 CGAACATTCCAGGCTAATCTGATTA 59.008 40.000 9.58 9.58 36.93 1.75
611 613 6.146837 CGAACATTCCAGGCTAATCTGATTAG 59.853 42.308 25.94 25.94 43.94 1.73
622 624 6.166984 CTAATCTGATTAGCTGTCCTGGAA 57.833 41.667 20.90 0.00 36.20 3.53
648 1999 4.394712 GACCACCGCCCAGGACAG 62.395 72.222 0.00 0.00 45.00 3.51
655 2006 1.522092 CGCCCAGGACAGCTAATCA 59.478 57.895 0.00 0.00 0.00 2.57
659 2010 1.561542 CCCAGGACAGCTAATCACCTT 59.438 52.381 0.00 0.00 0.00 3.50
661 2012 3.274288 CCAGGACAGCTAATCACCTTTC 58.726 50.000 0.00 0.00 0.00 2.62
662 2013 3.054802 CCAGGACAGCTAATCACCTTTCT 60.055 47.826 0.00 0.00 0.00 2.52
664 2015 5.006386 CAGGACAGCTAATCACCTTTCTTT 58.994 41.667 0.00 0.00 0.00 2.52
666 2017 6.015940 CAGGACAGCTAATCACCTTTCTTTTT 60.016 38.462 0.00 0.00 0.00 1.94
684 2035 4.447138 TTTTTGAGGGAAGGACAGCTAA 57.553 40.909 0.00 0.00 0.00 3.09
685 2036 4.657814 TTTTGAGGGAAGGACAGCTAAT 57.342 40.909 0.00 0.00 0.00 1.73
686 2037 3.914426 TTGAGGGAAGGACAGCTAATC 57.086 47.619 0.00 0.00 0.00 1.75
687 2038 3.121929 TGAGGGAAGGACAGCTAATCT 57.878 47.619 0.00 0.00 0.00 2.40
688 2039 3.034635 TGAGGGAAGGACAGCTAATCTC 58.965 50.000 0.00 0.00 0.00 2.75
689 2040 2.367241 GAGGGAAGGACAGCTAATCTCC 59.633 54.545 0.00 0.00 0.00 3.71
720 2071 6.304356 TCAATCATTGATCAATAAGACCGC 57.696 37.500 20.32 0.00 34.08 5.68
721 2072 6.057533 TCAATCATTGATCAATAAGACCGCT 58.942 36.000 20.32 0.00 34.08 5.52
722 2073 7.216494 TCAATCATTGATCAATAAGACCGCTA 58.784 34.615 20.32 0.00 34.08 4.26
723 2074 7.171508 TCAATCATTGATCAATAAGACCGCTAC 59.828 37.037 20.32 0.00 34.08 3.58
724 2075 6.161855 TCATTGATCAATAAGACCGCTACT 57.838 37.500 20.32 0.00 0.00 2.57
725 2076 6.582636 TCATTGATCAATAAGACCGCTACTT 58.417 36.000 20.32 0.00 0.00 2.24
726 2077 7.047891 TCATTGATCAATAAGACCGCTACTTT 58.952 34.615 20.32 0.00 0.00 2.66
727 2078 7.552687 TCATTGATCAATAAGACCGCTACTTTT 59.447 33.333 20.32 0.00 0.00 2.27
728 2079 7.681939 TTGATCAATAAGACCGCTACTTTTT 57.318 32.000 3.38 0.00 0.00 1.94
761 2112 7.091443 AGATAATAAGACCGCTACTTGCATAC 58.909 38.462 0.00 0.00 43.06 2.39
835 4053 2.498167 CAGGCCATAGAACCTGCATAC 58.502 52.381 5.01 0.00 46.50 2.39
874 4092 1.531058 GCAGTTCGTCACACACAAACC 60.531 52.381 0.00 0.00 0.00 3.27
904 4122 8.591072 AGCCATATTTCCCATCTCATAATTTTG 58.409 33.333 0.00 0.00 0.00 2.44
1030 4248 1.884464 CATCAGCCACATCGTCCCG 60.884 63.158 0.00 0.00 0.00 5.14
1137 4355 4.712425 CGTCGACCGTGTCACCCC 62.712 72.222 10.58 0.00 32.09 4.95
1173 4392 4.796495 GGCACCGCGATCCCCTTT 62.796 66.667 8.23 0.00 0.00 3.11
1452 4671 0.838122 AGCACCTCTACAGGCAAGGT 60.838 55.000 0.00 0.00 45.05 3.50
1531 4750 1.880340 GAGTGCAAGATCCTCGGCG 60.880 63.158 0.00 0.00 0.00 6.46
1555 4774 2.671276 TGCCGCCGCATTTCTTGA 60.671 55.556 0.00 0.00 41.12 3.02
1596 4815 2.725312 GCTGATGCAGGAGGTCCGA 61.725 63.158 0.00 0.00 42.08 4.55
1945 5164 1.066918 GACGACGTGAAGGTGTGGT 59.933 57.895 4.58 0.00 0.00 4.16
2001 5220 4.189580 AAGTGCCTGGTGGTGCGT 62.190 61.111 0.00 0.00 35.27 5.24
2172 5391 1.080093 GATCGTGGACGTGCTTGGA 60.080 57.895 8.99 3.16 40.80 3.53
2181 5400 1.219664 CGTGCTTGGAATCGGGGTA 59.780 57.895 0.00 0.00 0.00 3.69
2301 5520 1.473080 GCTCTGGAGAAGCTGATGGAC 60.473 57.143 1.35 0.00 0.00 4.02
2310 5529 3.095347 GCTGATGGACGGAGGGGTC 62.095 68.421 0.00 0.00 36.18 4.46
2315 5534 4.144703 GGACGGAGGGGTCGAAGC 62.145 72.222 0.00 0.00 37.82 3.86
2324 5543 2.126031 GGTCGAAGCGGAGGACAC 60.126 66.667 0.00 0.00 32.39 3.67
2351 5570 2.619074 GGAAGGCTCTGGCATGTAAAGT 60.619 50.000 0.00 0.00 40.87 2.66
2381 5600 1.271379 CGCTTCTTTGAAGGAAGGGGA 60.271 52.381 21.19 0.00 44.52 4.81
2400 5619 3.120786 GGGAGTCGTCGTACAACAATTTG 60.121 47.826 0.00 0.00 38.83 2.32
2434 5654 6.545504 TTCAGTCTGTGTCTGAAAATTAGC 57.454 37.500 5.99 0.00 45.14 3.09
2435 5655 5.858381 TCAGTCTGTGTCTGAAAATTAGCT 58.142 37.500 0.00 0.00 38.71 3.32
2436 5656 5.698089 TCAGTCTGTGTCTGAAAATTAGCTG 59.302 40.000 0.00 0.00 38.71 4.24
2437 5657 5.698089 CAGTCTGTGTCTGAAAATTAGCTGA 59.302 40.000 0.00 0.00 35.20 4.26
2438 5658 5.931146 AGTCTGTGTCTGAAAATTAGCTGAG 59.069 40.000 0.00 0.00 0.00 3.35
2439 5659 4.692625 TCTGTGTCTGAAAATTAGCTGAGC 59.307 41.667 0.00 0.00 0.00 4.26
2440 5660 4.388485 TGTGTCTGAAAATTAGCTGAGCA 58.612 39.130 7.39 0.00 0.00 4.26
2441 5661 4.453478 TGTGTCTGAAAATTAGCTGAGCAG 59.547 41.667 7.39 0.00 0.00 4.24
2442 5662 4.453819 GTGTCTGAAAATTAGCTGAGCAGT 59.546 41.667 7.39 0.00 0.00 4.40
2443 5663 4.692625 TGTCTGAAAATTAGCTGAGCAGTC 59.307 41.667 7.39 0.00 0.00 3.51
2444 5664 4.094146 GTCTGAAAATTAGCTGAGCAGTCC 59.906 45.833 7.39 0.00 0.00 3.85
2445 5665 3.347216 TGAAAATTAGCTGAGCAGTCCC 58.653 45.455 7.39 0.00 0.00 4.46
2446 5666 2.426842 AAATTAGCTGAGCAGTCCCC 57.573 50.000 7.39 0.00 0.00 4.81
2447 5667 0.548510 AATTAGCTGAGCAGTCCCCC 59.451 55.000 7.39 0.00 0.00 5.40
2489 5709 3.745458 GCTGAGCAGTCTTAGATAATGGC 59.255 47.826 0.00 0.00 0.00 4.40
2578 5870 7.217906 ACTGAAGTTTCTAACCCTACTTTCAG 58.782 38.462 8.39 8.39 34.99 3.02
2579 5871 7.133133 TGAAGTTTCTAACCCTACTTTCAGT 57.867 36.000 0.00 0.00 31.41 3.41
2580 5872 7.571025 TGAAGTTTCTAACCCTACTTTCAGTT 58.429 34.615 0.00 0.00 31.41 3.16
2581 5873 8.050930 TGAAGTTTCTAACCCTACTTTCAGTTT 58.949 33.333 0.00 0.00 31.41 2.66
2582 5874 8.447924 AAGTTTCTAACCCTACTTTCAGTTTC 57.552 34.615 0.00 0.00 0.00 2.78
2583 5875 7.571025 AGTTTCTAACCCTACTTTCAGTTTCA 58.429 34.615 0.00 0.00 0.00 2.69
2623 5915 1.086696 CCCACAGCAGTTGGTATTCG 58.913 55.000 0.00 0.00 0.00 3.34
2645 5937 3.414269 GTGTTTAACGGAAATCCCTCCA 58.586 45.455 0.00 0.00 34.91 3.86
2655 5947 0.988145 AATCCCTCCATCGCCCAGAA 60.988 55.000 0.00 0.00 0.00 3.02
2657 5949 2.669133 CCCTCCATCGCCCAGAACA 61.669 63.158 0.00 0.00 0.00 3.18
2659 5951 0.745845 CCTCCATCGCCCAGAACAAG 60.746 60.000 0.00 0.00 0.00 3.16
2660 5952 0.036010 CTCCATCGCCCAGAACAAGT 60.036 55.000 0.00 0.00 0.00 3.16
2662 5954 0.606401 CCATCGCCCAGAACAAGTGT 60.606 55.000 0.00 0.00 0.00 3.55
2663 5955 0.798776 CATCGCCCAGAACAAGTGTC 59.201 55.000 0.00 0.00 0.00 3.67
2664 5956 0.687354 ATCGCCCAGAACAAGTGTCT 59.313 50.000 0.00 0.00 0.00 3.41
2665 5957 1.334160 TCGCCCAGAACAAGTGTCTA 58.666 50.000 0.00 0.00 0.00 2.59
2666 5958 1.689813 TCGCCCAGAACAAGTGTCTAA 59.310 47.619 0.00 0.00 0.00 2.10
2667 5959 2.103432 TCGCCCAGAACAAGTGTCTAAA 59.897 45.455 0.00 0.00 0.00 1.85
2668 5960 2.480419 CGCCCAGAACAAGTGTCTAAAG 59.520 50.000 0.00 0.00 0.00 1.85
2669 5961 3.477530 GCCCAGAACAAGTGTCTAAAGT 58.522 45.455 0.00 0.00 0.00 2.66
2670 5962 3.883489 GCCCAGAACAAGTGTCTAAAGTT 59.117 43.478 0.00 0.00 0.00 2.66
2671 5963 4.338400 GCCCAGAACAAGTGTCTAAAGTTT 59.662 41.667 0.00 0.00 0.00 2.66
2672 5964 5.163550 GCCCAGAACAAGTGTCTAAAGTTTT 60.164 40.000 0.00 0.00 0.00 2.43
2673 5965 6.038936 GCCCAGAACAAGTGTCTAAAGTTTTA 59.961 38.462 0.00 0.00 0.00 1.52
2674 5966 7.255486 GCCCAGAACAAGTGTCTAAAGTTTTAT 60.255 37.037 0.00 0.00 0.00 1.40
2675 5967 8.076178 CCCAGAACAAGTGTCTAAAGTTTTATG 58.924 37.037 0.00 0.00 0.00 1.90
2676 5968 8.076178 CCAGAACAAGTGTCTAAAGTTTTATGG 58.924 37.037 0.00 0.00 0.00 2.74
2677 5969 8.076178 CAGAACAAGTGTCTAAAGTTTTATGGG 58.924 37.037 0.00 0.00 0.00 4.00
2678 5970 6.894339 ACAAGTGTCTAAAGTTTTATGGGG 57.106 37.500 0.00 0.00 0.00 4.96
2679 5971 5.773176 ACAAGTGTCTAAAGTTTTATGGGGG 59.227 40.000 0.00 0.00 0.00 5.40
2680 5972 4.341487 AGTGTCTAAAGTTTTATGGGGGC 58.659 43.478 0.00 0.00 0.00 5.80
2681 5973 4.044191 AGTGTCTAAAGTTTTATGGGGGCT 59.956 41.667 0.00 0.00 0.00 5.19
2682 5974 4.770531 GTGTCTAAAGTTTTATGGGGGCTT 59.229 41.667 0.00 0.00 0.00 4.35
2683 5975 5.947566 GTGTCTAAAGTTTTATGGGGGCTTA 59.052 40.000 0.00 0.00 0.00 3.09
2684 5976 6.095021 GTGTCTAAAGTTTTATGGGGGCTTAG 59.905 42.308 0.00 0.00 0.00 2.18
2685 5977 5.067413 GTCTAAAGTTTTATGGGGGCTTAGC 59.933 44.000 0.00 0.00 0.00 3.09
2686 5978 3.466395 AAGTTTTATGGGGGCTTAGCA 57.534 42.857 6.53 0.00 0.00 3.49
2687 5979 2.735151 AGTTTTATGGGGGCTTAGCAC 58.265 47.619 6.53 0.77 0.00 4.40
2688 5980 1.404035 GTTTTATGGGGGCTTAGCACG 59.596 52.381 6.53 0.00 29.41 5.34
2689 5981 0.913205 TTTATGGGGGCTTAGCACGA 59.087 50.000 6.53 0.00 29.41 4.35
2690 5982 0.179468 TTATGGGGGCTTAGCACGAC 59.821 55.000 6.53 0.00 29.41 4.34
2691 5983 2.023414 TATGGGGGCTTAGCACGACG 62.023 60.000 6.53 0.00 29.41 5.12
2692 5984 3.766691 GGGGGCTTAGCACGACGA 61.767 66.667 6.53 0.00 29.41 4.20
2693 5985 2.508663 GGGGCTTAGCACGACGAC 60.509 66.667 6.53 0.00 29.41 4.34
2694 5986 2.572284 GGGCTTAGCACGACGACT 59.428 61.111 6.53 0.59 0.00 4.18
2695 5987 1.080025 GGGCTTAGCACGACGACTT 60.080 57.895 6.53 0.00 0.00 3.01
2696 5988 0.669625 GGGCTTAGCACGACGACTTT 60.670 55.000 6.53 0.00 0.00 2.66
2697 5989 1.145803 GGCTTAGCACGACGACTTTT 58.854 50.000 6.53 0.00 0.00 2.27
2698 5990 1.126296 GGCTTAGCACGACGACTTTTC 59.874 52.381 6.53 0.00 0.00 2.29
2716 6008 8.961294 GACTTTTCGACTATCTACTACAACAA 57.039 34.615 0.00 0.00 0.00 2.83
2717 6009 8.967552 ACTTTTCGACTATCTACTACAACAAG 57.032 34.615 0.00 0.00 0.00 3.16
2718 6010 8.574737 ACTTTTCGACTATCTACTACAACAAGT 58.425 33.333 0.00 0.00 0.00 3.16
2719 6011 9.408069 CTTTTCGACTATCTACTACAACAAGTT 57.592 33.333 0.00 0.00 0.00 2.66
2720 6012 9.754382 TTTTCGACTATCTACTACAACAAGTTT 57.246 29.630 0.00 0.00 0.00 2.66
2721 6013 9.754382 TTTCGACTATCTACTACAACAAGTTTT 57.246 29.630 0.00 0.00 0.00 2.43
2722 6014 8.738199 TCGACTATCTACTACAACAAGTTTTG 57.262 34.615 0.00 0.00 0.00 2.44
2724 6016 8.636843 CGACTATCTACTACAACAAGTTTTGTC 58.363 37.037 6.68 0.00 44.59 3.18
2725 6017 8.828688 ACTATCTACTACAACAAGTTTTGTCC 57.171 34.615 6.68 0.00 44.59 4.02
2726 6018 6.780706 ATCTACTACAACAAGTTTTGTCCG 57.219 37.500 6.68 4.02 44.59 4.79
2727 6019 5.904941 TCTACTACAACAAGTTTTGTCCGA 58.095 37.500 6.68 0.39 44.59 4.55
2728 6020 4.870221 ACTACAACAAGTTTTGTCCGAC 57.130 40.909 6.68 0.00 44.59 4.79
2729 6021 4.510571 ACTACAACAAGTTTTGTCCGACT 58.489 39.130 0.00 0.00 44.59 4.18
2730 6022 4.569564 ACTACAACAAGTTTTGTCCGACTC 59.430 41.667 0.00 0.00 44.59 3.36
2731 6023 2.681344 ACAACAAGTTTTGTCCGACTCC 59.319 45.455 0.00 0.00 44.59 3.85
2732 6024 1.578583 ACAAGTTTTGTCCGACTCCG 58.421 50.000 0.00 0.00 40.56 4.63
2754 6046 3.403624 TGGAGGGACCATGACAGC 58.596 61.111 0.00 0.00 44.64 4.40
2755 6047 2.187946 GGAGGGACCATGACAGCG 59.812 66.667 0.00 0.00 38.79 5.18
2756 6048 2.187946 GAGGGACCATGACAGCGG 59.812 66.667 0.00 0.00 0.00 5.52
2757 6049 4.101448 AGGGACCATGACAGCGGC 62.101 66.667 0.00 0.00 0.00 6.53
2759 6051 4.760047 GGACCATGACAGCGGCGT 62.760 66.667 9.37 0.00 0.00 5.68
2760 6052 3.490759 GACCATGACAGCGGCGTG 61.491 66.667 9.37 8.36 0.00 5.34
2777 6069 3.793144 GCCTTCGGCTTCAGTGCG 61.793 66.667 0.00 0.00 46.69 5.34
2778 6070 2.357517 CCTTCGGCTTCAGTGCGT 60.358 61.111 0.00 0.00 0.00 5.24
2779 6071 2.671177 CCTTCGGCTTCAGTGCGTG 61.671 63.158 0.00 0.00 0.00 5.34
2780 6072 1.956170 CTTCGGCTTCAGTGCGTGT 60.956 57.895 0.00 0.00 0.00 4.49
2781 6073 0.666274 CTTCGGCTTCAGTGCGTGTA 60.666 55.000 0.00 0.00 0.00 2.90
2782 6074 0.666274 TTCGGCTTCAGTGCGTGTAG 60.666 55.000 0.00 0.00 0.00 2.74
2783 6075 1.372997 CGGCTTCAGTGCGTGTAGT 60.373 57.895 0.00 0.00 0.00 2.73
2784 6076 1.344942 CGGCTTCAGTGCGTGTAGTC 61.345 60.000 0.00 0.00 0.00 2.59
2785 6077 1.344942 GGCTTCAGTGCGTGTAGTCG 61.345 60.000 0.00 0.00 0.00 4.18
2786 6078 0.663568 GCTTCAGTGCGTGTAGTCGT 60.664 55.000 0.00 0.00 0.00 4.34
2787 6079 1.328439 CTTCAGTGCGTGTAGTCGTC 58.672 55.000 0.00 0.00 0.00 4.20
2788 6080 0.385098 TTCAGTGCGTGTAGTCGTCG 60.385 55.000 0.00 0.00 0.00 5.12
2792 6084 4.265355 GCGTGTAGTCGTCGCTAG 57.735 61.111 0.00 0.00 45.29 3.42
2793 6085 1.297451 GCGTGTAGTCGTCGCTAGG 60.297 63.158 0.00 0.00 45.29 3.02
2794 6086 1.975363 GCGTGTAGTCGTCGCTAGGT 61.975 60.000 0.00 0.00 45.29 3.08
2795 6087 0.247576 CGTGTAGTCGTCGCTAGGTG 60.248 60.000 0.00 0.00 0.00 4.00
2796 6088 0.098376 GTGTAGTCGTCGCTAGGTGG 59.902 60.000 0.00 0.00 0.00 4.61
2797 6089 0.321919 TGTAGTCGTCGCTAGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
2798 6090 0.807496 GTAGTCGTCGCTAGGTGGTT 59.193 55.000 0.00 0.00 0.00 3.67
2799 6091 1.200948 GTAGTCGTCGCTAGGTGGTTT 59.799 52.381 0.00 0.00 0.00 3.27
2800 6092 1.538047 AGTCGTCGCTAGGTGGTTTA 58.462 50.000 0.00 0.00 0.00 2.01
2801 6093 1.200948 AGTCGTCGCTAGGTGGTTTAC 59.799 52.381 0.00 0.00 0.00 2.01
2802 6094 1.200948 GTCGTCGCTAGGTGGTTTACT 59.799 52.381 0.00 0.00 0.00 2.24
2803 6095 1.200716 TCGTCGCTAGGTGGTTTACTG 59.799 52.381 0.00 0.00 0.00 2.74
2804 6096 1.200716 CGTCGCTAGGTGGTTTACTGA 59.799 52.381 0.00 0.00 0.00 3.41
2805 6097 2.159282 CGTCGCTAGGTGGTTTACTGAT 60.159 50.000 0.00 0.00 0.00 2.90
2806 6098 3.445857 GTCGCTAGGTGGTTTACTGATC 58.554 50.000 0.00 0.00 0.00 2.92
2807 6099 3.130693 GTCGCTAGGTGGTTTACTGATCT 59.869 47.826 0.00 0.00 0.00 2.75
2808 6100 3.130516 TCGCTAGGTGGTTTACTGATCTG 59.869 47.826 0.00 0.00 0.00 2.90
2809 6101 3.738281 CGCTAGGTGGTTTACTGATCTGG 60.738 52.174 4.49 0.00 0.00 3.86
2810 6102 3.451178 GCTAGGTGGTTTACTGATCTGGA 59.549 47.826 4.49 0.00 0.00 3.86
2811 6103 4.101741 GCTAGGTGGTTTACTGATCTGGAT 59.898 45.833 4.49 0.00 0.00 3.41
2812 6104 4.494091 AGGTGGTTTACTGATCTGGATG 57.506 45.455 4.49 0.00 0.00 3.51
2813 6105 3.846588 AGGTGGTTTACTGATCTGGATGT 59.153 43.478 4.49 0.00 0.00 3.06
2814 6106 5.030147 AGGTGGTTTACTGATCTGGATGTA 58.970 41.667 4.49 0.00 0.00 2.29
2815 6107 5.487488 AGGTGGTTTACTGATCTGGATGTAA 59.513 40.000 4.49 0.00 0.00 2.41
2816 6108 6.158695 AGGTGGTTTACTGATCTGGATGTAAT 59.841 38.462 4.49 0.00 0.00 1.89
2817 6109 6.828785 GGTGGTTTACTGATCTGGATGTAATT 59.171 38.462 4.49 0.00 0.00 1.40
2818 6110 7.339466 GGTGGTTTACTGATCTGGATGTAATTT 59.661 37.037 4.49 0.00 0.00 1.82
2819 6111 8.739972 GTGGTTTACTGATCTGGATGTAATTTT 58.260 33.333 4.49 0.00 0.00 1.82
2820 6112 8.956426 TGGTTTACTGATCTGGATGTAATTTTC 58.044 33.333 4.49 0.00 0.00 2.29
2821 6113 8.956426 GGTTTACTGATCTGGATGTAATTTTCA 58.044 33.333 4.49 0.00 0.00 2.69
2841 6133 8.918961 TTTTCATTATTTTCAGTGTTCGTTGT 57.081 26.923 0.00 0.00 0.00 3.32
2843 6135 8.996988 TTCATTATTTTCAGTGTTCGTTGTAC 57.003 30.769 0.00 0.00 0.00 2.90
2844 6136 8.373048 TCATTATTTTCAGTGTTCGTTGTACT 57.627 30.769 0.00 0.00 0.00 2.73
2845 6137 9.478768 TCATTATTTTCAGTGTTCGTTGTACTA 57.521 29.630 0.00 0.00 0.00 1.82
2846 6138 9.525007 CATTATTTTCAGTGTTCGTTGTACTAC 57.475 33.333 0.00 0.00 0.00 2.73
2847 6139 5.971895 TTTTCAGTGTTCGTTGTACTACC 57.028 39.130 1.76 0.00 0.00 3.18
2848 6140 4.652421 TTCAGTGTTCGTTGTACTACCA 57.348 40.909 1.76 0.00 0.00 3.25
2849 6141 4.859304 TCAGTGTTCGTTGTACTACCAT 57.141 40.909 1.76 0.00 0.00 3.55
2850 6142 4.552355 TCAGTGTTCGTTGTACTACCATG 58.448 43.478 1.76 0.00 0.00 3.66
2851 6143 4.278919 TCAGTGTTCGTTGTACTACCATGA 59.721 41.667 0.00 0.00 0.00 3.07
2852 6144 5.047590 TCAGTGTTCGTTGTACTACCATGAT 60.048 40.000 0.00 0.00 0.00 2.45
2853 6145 5.637810 CAGTGTTCGTTGTACTACCATGATT 59.362 40.000 0.00 0.00 0.00 2.57
2854 6146 5.637810 AGTGTTCGTTGTACTACCATGATTG 59.362 40.000 0.00 0.00 0.00 2.67
2855 6147 5.636121 GTGTTCGTTGTACTACCATGATTGA 59.364 40.000 0.00 0.00 0.00 2.57
2856 6148 6.146510 GTGTTCGTTGTACTACCATGATTGAA 59.853 38.462 0.00 0.00 0.00 2.69
2857 6149 6.367695 TGTTCGTTGTACTACCATGATTGAAG 59.632 38.462 0.00 0.00 0.00 3.02
2858 6150 6.275494 TCGTTGTACTACCATGATTGAAGA 57.725 37.500 0.00 0.00 0.00 2.87
2859 6151 6.873997 TCGTTGTACTACCATGATTGAAGAT 58.126 36.000 0.00 0.00 0.00 2.40
2860 6152 7.327975 TCGTTGTACTACCATGATTGAAGATT 58.672 34.615 0.00 0.00 0.00 2.40
2861 6153 8.471609 TCGTTGTACTACCATGATTGAAGATTA 58.528 33.333 0.00 0.00 0.00 1.75
2862 6154 9.093970 CGTTGTACTACCATGATTGAAGATTAA 57.906 33.333 0.00 0.00 0.00 1.40
2919 6211 1.341531 CAAGTGTCTGAAGTCCGACCT 59.658 52.381 0.00 0.00 0.00 3.85
2920 6212 1.249407 AGTGTCTGAAGTCCGACCTC 58.751 55.000 0.00 0.00 0.00 3.85
2924 6216 0.677098 TCTGAAGTCCGACCTCCTCG 60.677 60.000 0.00 0.00 42.54 4.63
2933 6227 0.526662 CGACCTCCTCGCACTAAACT 59.473 55.000 0.00 0.00 35.06 2.66
2936 6230 3.366679 CGACCTCCTCGCACTAAACTTAA 60.367 47.826 0.00 0.00 35.06 1.85
2941 6235 2.354805 CCTCGCACTAAACTTAAGGGCT 60.355 50.000 7.53 0.00 41.39 5.19
2949 6243 2.675658 AACTTAAGGGCTCAGGCAAA 57.324 45.000 7.53 0.00 40.87 3.68
2950 6244 2.675658 ACTTAAGGGCTCAGGCAAAA 57.324 45.000 7.53 0.00 40.87 2.44
2966 6260 2.801342 GCAAAACGAAGCAAATCACCCA 60.801 45.455 0.00 0.00 0.00 4.51
2975 6269 5.481105 GAAGCAAATCACCCATGAAAATGA 58.519 37.500 0.00 0.00 38.69 2.57
3004 6298 4.618920 AGCGAGGAAAATACCCGATATT 57.381 40.909 0.00 0.00 34.78 1.28
3138 6434 7.781056 ACACACCAAGAAAAAGTACATGAAAT 58.219 30.769 0.00 0.00 0.00 2.17
3157 6453 6.991938 TGAAATACTCCCAACAAAGGAAATG 58.008 36.000 0.00 0.00 31.49 2.32
3181 6479 5.882557 GTGCAGAAATCCTTCTTCAATCCTA 59.117 40.000 0.00 0.00 40.05 2.94
3208 6506 4.502962 CACCAACACATTGACCAAAAACT 58.497 39.130 0.00 0.00 38.15 2.66
3210 6508 5.063312 CACCAACACATTGACCAAAAACTTC 59.937 40.000 0.00 0.00 38.15 3.01
3219 6517 1.064240 ACCAAAAACTTCCGACCACCT 60.064 47.619 0.00 0.00 0.00 4.00
3226 6524 1.605058 CTTCCGACCACCTCCATCGT 61.605 60.000 0.00 0.00 34.02 3.73
3261 6702 4.743955 CCAAAGAGGAGAAGAAACGGTCTT 60.744 45.833 3.51 3.51 44.88 3.01
3293 6734 5.163478 CCAAAATCCAAGAGAAAGCCATAGG 60.163 44.000 0.00 0.00 0.00 2.57
3300 6741 4.307032 AGAGAAAGCCATAGGAGCAAAA 57.693 40.909 0.00 0.00 0.00 2.44
3330 6771 2.435586 CCTCTGAACAGGCGCCAG 60.436 66.667 31.54 24.99 0.00 4.85
3342 6783 4.041917 CGCCAGCGCAAATGGTGT 62.042 61.111 17.12 0.00 42.26 4.16
3355 6796 0.944311 ATGGTGTCGCACTTGTCGTC 60.944 55.000 9.31 0.00 34.40 4.20
3356 6797 1.590525 GGTGTCGCACTTGTCGTCA 60.591 57.895 9.31 0.00 34.40 4.35
3360 6801 0.666274 GTCGCACTTGTCGTCATGGA 60.666 55.000 0.00 0.00 0.00 3.41
3367 6808 1.061131 CTTGTCGTCATGGATTGTCGC 59.939 52.381 0.00 0.00 36.91 5.19
3386 6827 0.037590 CCCGGAACAAATCTCCACCA 59.962 55.000 0.73 0.00 32.77 4.17
3405 6846 1.227089 CTCTTGGATCGCGACCCTG 60.227 63.158 22.79 13.83 0.00 4.45
3425 6866 2.035449 TGAAGGTCTTGAACGACGATGT 59.965 45.455 0.00 0.00 34.75 3.06
3426 6867 2.814280 AGGTCTTGAACGACGATGTT 57.186 45.000 0.00 0.00 34.75 2.71
3427 6868 2.404215 AGGTCTTGAACGACGATGTTG 58.596 47.619 0.00 0.00 34.75 3.33
3428 6869 2.132762 GGTCTTGAACGACGATGTTGT 58.867 47.619 0.00 0.00 34.75 3.32
3429 6870 2.155155 GGTCTTGAACGACGATGTTGTC 59.845 50.000 0.00 0.00 34.75 3.18
3430 6871 2.792674 GTCTTGAACGACGATGTTGTCA 59.207 45.455 0.00 0.00 38.84 3.58
3431 6872 3.244345 GTCTTGAACGACGATGTTGTCAA 59.756 43.478 0.00 0.88 38.84 3.18
3432 6873 3.489416 TCTTGAACGACGATGTTGTCAAG 59.511 43.478 0.00 14.46 38.84 3.02
3433 6874 3.086818 TGAACGACGATGTTGTCAAGA 57.913 42.857 0.00 0.00 38.84 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.744874 TATGCCACGTAGGACTGAGC 59.255 55.000 8.04 0.00 41.22 4.26
1 2 3.520290 TTTATGCCACGTAGGACTGAG 57.480 47.619 8.04 0.00 41.22 3.35
2 3 3.965379 TTTTATGCCACGTAGGACTGA 57.035 42.857 8.04 0.00 41.22 3.41
20 21 6.825610 TCTTGGCATGTTTTACCAGATTTTT 58.174 32.000 0.00 0.00 34.28 1.94
21 22 6.418057 TCTTGGCATGTTTTACCAGATTTT 57.582 33.333 0.00 0.00 34.28 1.82
22 23 6.610075 ATCTTGGCATGTTTTACCAGATTT 57.390 33.333 0.00 0.00 34.28 2.17
23 24 6.610075 AATCTTGGCATGTTTTACCAGATT 57.390 33.333 0.00 0.33 34.28 2.40
24 25 5.163622 CGAATCTTGGCATGTTTTACCAGAT 60.164 40.000 0.00 0.00 34.28 2.90
25 26 4.155826 CGAATCTTGGCATGTTTTACCAGA 59.844 41.667 0.00 0.00 34.28 3.86
26 27 4.082787 ACGAATCTTGGCATGTTTTACCAG 60.083 41.667 0.00 0.00 34.28 4.00
27 28 3.823873 ACGAATCTTGGCATGTTTTACCA 59.176 39.130 0.00 0.00 0.00 3.25
28 29 4.165779 CACGAATCTTGGCATGTTTTACC 58.834 43.478 0.00 0.00 0.00 2.85
29 30 3.608073 GCACGAATCTTGGCATGTTTTAC 59.392 43.478 0.00 0.00 0.00 2.01
30 31 3.254411 TGCACGAATCTTGGCATGTTTTA 59.746 39.130 0.00 0.00 0.00 1.52
31 32 2.035704 TGCACGAATCTTGGCATGTTTT 59.964 40.909 0.00 0.00 0.00 2.43
32 33 1.612950 TGCACGAATCTTGGCATGTTT 59.387 42.857 0.00 0.00 0.00 2.83
33 34 1.246649 TGCACGAATCTTGGCATGTT 58.753 45.000 0.00 0.00 0.00 2.71
34 35 1.246649 TTGCACGAATCTTGGCATGT 58.753 45.000 0.00 0.00 35.98 3.21
35 36 2.350899 TTTGCACGAATCTTGGCATG 57.649 45.000 0.00 0.00 35.98 4.06
36 37 3.443329 TGTATTTGCACGAATCTTGGCAT 59.557 39.130 0.00 0.00 35.98 4.40
37 38 2.816672 TGTATTTGCACGAATCTTGGCA 59.183 40.909 0.00 0.00 0.00 4.92
38 39 3.485947 TGTATTTGCACGAATCTTGGC 57.514 42.857 0.00 0.00 0.00 4.52
39 40 4.320690 CGTTTGTATTTGCACGAATCTTGG 59.679 41.667 0.00 0.00 34.49 3.61
40 41 4.320690 CCGTTTGTATTTGCACGAATCTTG 59.679 41.667 0.00 0.00 34.49 3.02
41 42 4.214545 TCCGTTTGTATTTGCACGAATCTT 59.785 37.500 0.00 0.00 34.49 2.40
42 43 3.749088 TCCGTTTGTATTTGCACGAATCT 59.251 39.130 0.00 0.00 34.49 2.40
43 44 3.844099 GTCCGTTTGTATTTGCACGAATC 59.156 43.478 0.00 0.00 34.49 2.52
44 45 3.665848 CGTCCGTTTGTATTTGCACGAAT 60.666 43.478 0.00 0.00 34.49 3.34
45 46 2.348685 CGTCCGTTTGTATTTGCACGAA 60.349 45.455 0.00 0.00 34.49 3.85
46 47 1.192757 CGTCCGTTTGTATTTGCACGA 59.807 47.619 0.00 0.00 34.49 4.35
47 48 1.070443 ACGTCCGTTTGTATTTGCACG 60.070 47.619 0.00 0.00 0.00 5.34
48 49 2.673976 ACGTCCGTTTGTATTTGCAC 57.326 45.000 0.00 0.00 0.00 4.57
49 50 2.612672 TCAACGTCCGTTTGTATTTGCA 59.387 40.909 1.71 0.00 36.00 4.08
50 51 3.256285 TCAACGTCCGTTTGTATTTGC 57.744 42.857 1.71 0.00 36.00 3.68
51 52 4.083749 TGGATCAACGTCCGTTTGTATTTG 60.084 41.667 1.71 0.00 41.35 2.32
52 53 4.066490 TGGATCAACGTCCGTTTGTATTT 58.934 39.130 1.71 0.00 41.35 1.40
53 54 3.666274 TGGATCAACGTCCGTTTGTATT 58.334 40.909 1.71 0.00 41.35 1.89
54 55 3.322211 TGGATCAACGTCCGTTTGTAT 57.678 42.857 1.71 0.00 41.35 2.29
55 56 2.816204 TGGATCAACGTCCGTTTGTA 57.184 45.000 1.71 0.00 41.35 2.41
56 57 1.804151 CATGGATCAACGTCCGTTTGT 59.196 47.619 1.71 0.00 41.35 2.83
57 58 1.465689 GCATGGATCAACGTCCGTTTG 60.466 52.381 1.71 0.00 41.35 2.93
58 59 0.802494 GCATGGATCAACGTCCGTTT 59.198 50.000 1.71 0.00 41.35 3.60
59 60 1.358725 CGCATGGATCAACGTCCGTT 61.359 55.000 0.00 0.00 41.35 4.44
60 61 1.809619 CGCATGGATCAACGTCCGT 60.810 57.895 0.00 0.00 41.35 4.69
61 62 1.809619 ACGCATGGATCAACGTCCG 60.810 57.895 0.00 0.00 41.35 4.79
62 63 1.019278 ACACGCATGGATCAACGTCC 61.019 55.000 0.00 0.00 36.45 4.79
63 64 0.095245 CACACGCATGGATCAACGTC 59.905 55.000 0.00 0.00 36.45 4.34
64 65 1.298157 CCACACGCATGGATCAACGT 61.298 55.000 0.00 0.00 43.02 3.99
65 66 1.018752 TCCACACGCATGGATCAACG 61.019 55.000 4.14 0.00 44.14 4.10
66 67 2.853159 TCCACACGCATGGATCAAC 58.147 52.632 4.14 0.00 44.14 3.18
71 72 2.094757 AACTCGTCCACACGCATGGA 62.095 55.000 4.14 4.14 46.92 3.41
72 73 1.667830 AACTCGTCCACACGCATGG 60.668 57.895 0.00 0.00 46.28 3.66
73 74 1.492873 CAACTCGTCCACACGCATG 59.507 57.895 0.00 0.00 46.28 4.06
74 75 2.317609 GCAACTCGTCCACACGCAT 61.318 57.895 0.00 0.00 46.28 4.73
75 76 2.964925 GCAACTCGTCCACACGCA 60.965 61.111 0.00 0.00 46.28 5.24
76 77 2.042520 TTTGCAACTCGTCCACACGC 62.043 55.000 0.00 0.00 46.28 5.34
78 79 1.400494 ACTTTTGCAACTCGTCCACAC 59.600 47.619 0.00 0.00 0.00 3.82
79 80 1.400142 CACTTTTGCAACTCGTCCACA 59.600 47.619 0.00 0.00 0.00 4.17
80 81 2.105323 CACTTTTGCAACTCGTCCAC 57.895 50.000 0.00 0.00 0.00 4.02
92 93 1.938814 CACGCGTGTGGCACTTTTG 60.939 57.895 30.50 8.89 42.59 2.44
93 94 2.407210 CACGCGTGTGGCACTTTT 59.593 55.556 30.50 0.00 42.59 2.27
101 102 3.773630 CTAACGGCCACGCGTGTG 61.774 66.667 34.81 26.49 46.04 3.82
102 103 2.216750 ATACTAACGGCCACGCGTGT 62.217 55.000 34.81 20.21 46.04 4.49
103 104 1.079875 AATACTAACGGCCACGCGTG 61.080 55.000 31.77 31.77 46.04 5.34
104 105 0.390209 AAATACTAACGGCCACGCGT 60.390 50.000 5.58 5.58 46.04 6.01
105 106 0.722848 AAAATACTAACGGCCACGCG 59.277 50.000 3.53 3.53 46.04 6.01
106 107 1.267186 CGAAAATACTAACGGCCACGC 60.267 52.381 2.24 0.00 46.04 5.34
108 109 5.723492 AATACGAAAATACTAACGGCCAC 57.277 39.130 2.24 0.00 0.00 5.01
109 110 9.709495 ATAATAATACGAAAATACTAACGGCCA 57.291 29.630 2.24 0.00 0.00 5.36
130 131 9.991388 GCAACAAGGTTTACGTCAATAATAATA 57.009 29.630 0.00 0.00 0.00 0.98
131 132 7.694784 CGCAACAAGGTTTACGTCAATAATAAT 59.305 33.333 0.00 0.00 0.00 1.28
132 133 7.016466 CGCAACAAGGTTTACGTCAATAATAA 58.984 34.615 0.00 0.00 0.00 1.40
133 134 6.147492 ACGCAACAAGGTTTACGTCAATAATA 59.853 34.615 0.00 0.00 0.00 0.98
134 135 5.049267 ACGCAACAAGGTTTACGTCAATAAT 60.049 36.000 0.00 0.00 0.00 1.28
135 136 4.272991 ACGCAACAAGGTTTACGTCAATAA 59.727 37.500 0.00 0.00 0.00 1.40
136 137 3.808726 ACGCAACAAGGTTTACGTCAATA 59.191 39.130 0.00 0.00 0.00 1.90
137 138 2.614983 ACGCAACAAGGTTTACGTCAAT 59.385 40.909 0.00 0.00 0.00 2.57
138 139 2.008329 ACGCAACAAGGTTTACGTCAA 58.992 42.857 0.00 0.00 0.00 3.18
139 140 1.593933 GACGCAACAAGGTTTACGTCA 59.406 47.619 20.54 0.00 46.63 4.35
140 141 2.289890 GACGCAACAAGGTTTACGTC 57.710 50.000 14.61 14.61 42.36 4.34
141 142 1.328374 GTGACGCAACAAGGTTTACGT 59.672 47.619 6.63 6.63 36.30 3.57
142 143 1.333435 GGTGACGCAACAAGGTTTACG 60.333 52.381 0.00 0.00 0.00 3.18
143 144 1.002142 GGGTGACGCAACAAGGTTTAC 60.002 52.381 0.00 0.00 0.00 2.01
144 145 1.310904 GGGTGACGCAACAAGGTTTA 58.689 50.000 0.00 0.00 0.00 2.01
145 146 1.720694 CGGGTGACGCAACAAGGTTT 61.721 55.000 0.00 0.00 34.82 3.27
146 147 2.184167 CGGGTGACGCAACAAGGTT 61.184 57.895 0.00 0.00 34.82 3.50
147 148 2.590575 CGGGTGACGCAACAAGGT 60.591 61.111 0.00 0.00 34.82 3.50
156 157 2.259618 CAGATCACTTAACGGGTGACG 58.740 52.381 0.00 0.00 44.82 4.35
157 158 2.000447 GCAGATCACTTAACGGGTGAC 59.000 52.381 0.00 0.00 44.82 3.67
158 159 1.899814 AGCAGATCACTTAACGGGTGA 59.100 47.619 0.00 0.00 45.84 4.02
159 160 2.386661 AGCAGATCACTTAACGGGTG 57.613 50.000 0.00 0.00 36.17 4.61
160 161 2.615493 CCAAGCAGATCACTTAACGGGT 60.615 50.000 0.00 0.00 0.00 5.28
161 162 2.009774 CCAAGCAGATCACTTAACGGG 58.990 52.381 0.00 0.00 0.00 5.28
162 163 2.673368 GTCCAAGCAGATCACTTAACGG 59.327 50.000 0.00 0.00 0.00 4.44
163 164 2.673368 GGTCCAAGCAGATCACTTAACG 59.327 50.000 0.00 0.00 0.00 3.18
164 165 2.673368 CGGTCCAAGCAGATCACTTAAC 59.327 50.000 0.00 0.86 0.00 2.01
165 166 2.354704 CCGGTCCAAGCAGATCACTTAA 60.355 50.000 0.00 0.00 0.00 1.85
166 167 1.207089 CCGGTCCAAGCAGATCACTTA 59.793 52.381 0.00 0.00 0.00 2.24
167 168 0.036010 CCGGTCCAAGCAGATCACTT 60.036 55.000 0.00 0.00 0.00 3.16
168 169 1.599047 CCGGTCCAAGCAGATCACT 59.401 57.895 0.00 0.00 0.00 3.41
169 170 1.450312 CCCGGTCCAAGCAGATCAC 60.450 63.158 0.00 0.00 0.00 3.06
170 171 2.669133 CCCCGGTCCAAGCAGATCA 61.669 63.158 0.00 0.00 0.00 2.92
171 172 2.190578 CCCCGGTCCAAGCAGATC 59.809 66.667 0.00 0.00 0.00 2.75
172 173 2.610859 ACCCCGGTCCAAGCAGAT 60.611 61.111 0.00 0.00 0.00 2.90
173 174 3.636231 CACCCCGGTCCAAGCAGA 61.636 66.667 0.00 0.00 0.00 4.26
174 175 3.636231 TCACCCCGGTCCAAGCAG 61.636 66.667 0.00 0.00 0.00 4.24
175 176 3.948719 GTCACCCCGGTCCAAGCA 61.949 66.667 0.00 0.00 0.00 3.91
176 177 4.717313 GGTCACCCCGGTCCAAGC 62.717 72.222 0.00 0.00 0.00 4.01
177 178 4.029809 GGGTCACCCCGGTCCAAG 62.030 72.222 0.00 0.00 42.41 3.61
211 212 2.413837 CCATCACTCCGTCGTCTTTTT 58.586 47.619 0.00 0.00 0.00 1.94
227 228 1.524621 CAGGCCGTGTGATCCCATC 60.525 63.158 0.00 0.00 0.00 3.51
230 231 1.450312 CTTCAGGCCGTGTGATCCC 60.450 63.158 0.00 0.00 0.00 3.85
278 280 7.660112 TCGAGTAGTACAATTCCAAAGTTGTA 58.340 34.615 2.52 0.00 39.18 2.41
279 281 6.518493 TCGAGTAGTACAATTCCAAAGTTGT 58.482 36.000 2.52 0.00 41.16 3.32
280 282 7.545965 AGATCGAGTAGTACAATTCCAAAGTTG 59.454 37.037 2.52 0.00 0.00 3.16
281 283 7.612677 AGATCGAGTAGTACAATTCCAAAGTT 58.387 34.615 2.52 0.00 0.00 2.66
282 284 7.171630 AGATCGAGTAGTACAATTCCAAAGT 57.828 36.000 2.52 0.00 0.00 2.66
283 285 9.239002 CTTAGATCGAGTAGTACAATTCCAAAG 57.761 37.037 2.52 0.00 0.00 2.77
284 286 8.963725 TCTTAGATCGAGTAGTACAATTCCAAA 58.036 33.333 2.52 0.00 0.00 3.28
285 287 8.515695 TCTTAGATCGAGTAGTACAATTCCAA 57.484 34.615 2.52 0.00 0.00 3.53
286 288 8.515695 TTCTTAGATCGAGTAGTACAATTCCA 57.484 34.615 2.52 0.00 0.00 3.53
287 289 9.400638 CATTCTTAGATCGAGTAGTACAATTCC 57.599 37.037 2.52 0.00 0.00 3.01
288 290 9.400638 CCATTCTTAGATCGAGTAGTACAATTC 57.599 37.037 2.52 0.00 0.00 2.17
296 298 7.390440 ACTCAGATCCATTCTTAGATCGAGTAG 59.610 40.741 17.59 8.11 43.40 2.57
312 314 5.298026 CGAGAATAGTCAGAACTCAGATCCA 59.702 44.000 0.00 0.00 36.92 3.41
319 321 4.156190 TGACCACGAGAATAGTCAGAACTC 59.844 45.833 0.00 0.00 36.92 3.01
330 332 1.200252 CGACACTCTGACCACGAGAAT 59.800 52.381 0.00 0.00 32.87 2.40
368 370 4.373348 GTGGACACACAGATACTCCTAC 57.627 50.000 0.00 0.00 46.90 3.18
420 422 1.859998 GCCAAACTGTCAACGAGTTGC 60.860 52.381 10.83 7.15 40.24 4.17
449 451 3.296854 AGAAGGAACCAACAGGAAAACC 58.703 45.455 0.00 0.00 0.00 3.27
484 486 4.933400 GGATTTGTTTTAGACTGCGGAGTA 59.067 41.667 10.47 0.00 30.16 2.59
485 487 3.751698 GGATTTGTTTTAGACTGCGGAGT 59.248 43.478 10.23 10.23 33.98 3.85
486 488 3.751175 TGGATTTGTTTTAGACTGCGGAG 59.249 43.478 0.85 0.85 0.00 4.63
487 489 3.745799 TGGATTTGTTTTAGACTGCGGA 58.254 40.909 0.00 0.00 0.00 5.54
488 490 4.414852 CATGGATTTGTTTTAGACTGCGG 58.585 43.478 0.00 0.00 0.00 5.69
489 491 3.853671 GCATGGATTTGTTTTAGACTGCG 59.146 43.478 0.00 0.00 0.00 5.18
490 492 4.808558 TGCATGGATTTGTTTTAGACTGC 58.191 39.130 0.00 0.00 0.00 4.40
491 493 6.017400 ACTGCATGGATTTGTTTTAGACTG 57.983 37.500 0.00 0.00 0.00 3.51
492 494 6.006449 AGACTGCATGGATTTGTTTTAGACT 58.994 36.000 0.00 0.00 0.00 3.24
493 495 6.088824 CAGACTGCATGGATTTGTTTTAGAC 58.911 40.000 0.00 0.00 0.00 2.59
494 496 5.183713 CCAGACTGCATGGATTTGTTTTAGA 59.816 40.000 0.00 0.00 40.51 2.10
506 508 0.529337 CTCGCTACCAGACTGCATGG 60.529 60.000 3.18 3.18 43.87 3.66
507 509 0.457443 TCTCGCTACCAGACTGCATG 59.543 55.000 0.00 0.00 0.00 4.06
509 511 0.966179 TTTCTCGCTACCAGACTGCA 59.034 50.000 0.00 0.00 0.00 4.41
536 538 1.926510 GATGCATGACGACATTGACGA 59.073 47.619 15.06 0.00 34.15 4.20
537 539 1.660104 TGATGCATGACGACATTGACG 59.340 47.619 2.46 6.97 34.15 4.35
538 540 3.957671 ATGATGCATGACGACATTGAC 57.042 42.857 2.46 0.00 34.15 3.18
539 541 5.299148 TGATATGATGCATGACGACATTGA 58.701 37.500 2.46 0.00 34.15 2.57
540 542 5.600908 TGATATGATGCATGACGACATTG 57.399 39.130 2.46 0.00 34.15 2.82
541 543 5.333568 CGTTGATATGATGCATGACGACATT 60.334 40.000 2.46 0.00 34.15 2.71
542 544 4.151157 CGTTGATATGATGCATGACGACAT 59.849 41.667 2.46 3.20 37.19 3.06
543 545 3.490526 CGTTGATATGATGCATGACGACA 59.509 43.478 2.46 0.00 0.00 4.35
544 546 3.735746 TCGTTGATATGATGCATGACGAC 59.264 43.478 2.46 0.00 0.00 4.34
554 556 4.040829 TGCCCATTCTCTCGTTGATATGAT 59.959 41.667 0.00 0.00 0.00 2.45
555 557 3.387699 TGCCCATTCTCTCGTTGATATGA 59.612 43.478 0.00 0.00 0.00 2.15
562 564 2.427506 GTCTTTGCCCATTCTCTCGTT 58.572 47.619 0.00 0.00 0.00 3.85
566 568 2.427506 GTTCGTCTTTGCCCATTCTCT 58.572 47.619 0.00 0.00 0.00 3.10
567 569 1.128692 CGTTCGTCTTTGCCCATTCTC 59.871 52.381 0.00 0.00 0.00 2.87
568 570 1.156736 CGTTCGTCTTTGCCCATTCT 58.843 50.000 0.00 0.00 0.00 2.40
569 571 1.153353 TCGTTCGTCTTTGCCCATTC 58.847 50.000 0.00 0.00 0.00 2.67
570 572 1.265905 GTTCGTTCGTCTTTGCCCATT 59.734 47.619 0.00 0.00 0.00 3.16
573 575 0.872388 ATGTTCGTTCGTCTTTGCCC 59.128 50.000 0.00 0.00 0.00 5.36
575 577 2.032377 TGGAATGTTCGTTCGTCTTTGC 60.032 45.455 0.00 0.00 0.00 3.68
576 578 3.363970 CCTGGAATGTTCGTTCGTCTTTG 60.364 47.826 0.00 0.00 0.00 2.77
577 579 2.806244 CCTGGAATGTTCGTTCGTCTTT 59.194 45.455 0.00 0.00 0.00 2.52
578 580 2.413837 CCTGGAATGTTCGTTCGTCTT 58.586 47.619 0.00 0.00 0.00 3.01
580 582 0.442699 GCCTGGAATGTTCGTTCGTC 59.557 55.000 0.00 0.00 0.00 4.20
581 583 0.034896 AGCCTGGAATGTTCGTTCGT 59.965 50.000 0.00 0.00 0.00 3.85
583 585 4.034510 CAGATTAGCCTGGAATGTTCGTTC 59.965 45.833 0.00 0.00 0.00 3.95
585 587 3.197766 TCAGATTAGCCTGGAATGTTCGT 59.802 43.478 0.00 0.00 34.99 3.85
586 588 3.797039 TCAGATTAGCCTGGAATGTTCG 58.203 45.455 0.00 0.00 34.99 3.95
587 589 7.432350 CTAATCAGATTAGCCTGGAATGTTC 57.568 40.000 15.84 0.00 36.20 3.18
599 601 5.798125 TCCAGGACAGCTAATCAGATTAG 57.202 43.478 21.73 21.73 43.94 1.73
600 602 6.560003 TTTCCAGGACAGCTAATCAGATTA 57.440 37.500 2.77 2.77 0.00 1.75
601 603 5.441718 TTTCCAGGACAGCTAATCAGATT 57.558 39.130 0.20 0.20 0.00 2.40
602 604 5.441718 TTTTCCAGGACAGCTAATCAGAT 57.558 39.130 0.00 0.00 0.00 2.90
604 606 4.142513 GCTTTTTCCAGGACAGCTAATCAG 60.143 45.833 7.10 0.00 0.00 2.90
605 607 3.758554 GCTTTTTCCAGGACAGCTAATCA 59.241 43.478 7.10 0.00 0.00 2.57
606 608 3.129462 GGCTTTTTCCAGGACAGCTAATC 59.871 47.826 12.43 0.00 0.00 1.75
607 609 3.092301 GGCTTTTTCCAGGACAGCTAAT 58.908 45.455 12.43 0.00 0.00 1.73
608 610 2.514803 GGCTTTTTCCAGGACAGCTAA 58.485 47.619 12.43 0.00 0.00 3.09
609 611 1.271926 GGGCTTTTTCCAGGACAGCTA 60.272 52.381 12.43 0.00 0.00 3.32
610 612 0.540597 GGGCTTTTTCCAGGACAGCT 60.541 55.000 12.43 0.00 0.00 4.24
611 613 0.540597 AGGGCTTTTTCCAGGACAGC 60.541 55.000 6.05 6.05 0.00 4.40
612 614 1.202927 TCAGGGCTTTTTCCAGGACAG 60.203 52.381 0.00 0.00 0.00 3.51
614 616 1.248486 GTCAGGGCTTTTTCCAGGAC 58.752 55.000 0.00 0.00 0.00 3.85
616 618 0.178964 TGGTCAGGGCTTTTTCCAGG 60.179 55.000 0.00 0.00 0.00 4.45
617 619 0.961753 GTGGTCAGGGCTTTTTCCAG 59.038 55.000 0.00 0.00 0.00 3.86
618 620 0.469144 GGTGGTCAGGGCTTTTTCCA 60.469 55.000 0.00 0.00 0.00 3.53
619 621 1.524008 CGGTGGTCAGGGCTTTTTCC 61.524 60.000 0.00 0.00 0.00 3.13
620 622 1.956802 CGGTGGTCAGGGCTTTTTC 59.043 57.895 0.00 0.00 0.00 2.29
622 624 2.597510 GCGGTGGTCAGGGCTTTT 60.598 61.111 0.00 0.00 0.00 2.27
664 2015 4.289672 AGATTAGCTGTCCTTCCCTCAAAA 59.710 41.667 0.00 0.00 0.00 2.44
666 2017 3.452627 GAGATTAGCTGTCCTTCCCTCAA 59.547 47.826 0.00 0.00 0.00 3.02
667 2018 3.034635 GAGATTAGCTGTCCTTCCCTCA 58.965 50.000 0.00 0.00 0.00 3.86
668 2019 2.367241 GGAGATTAGCTGTCCTTCCCTC 59.633 54.545 0.00 0.00 34.40 4.30
669 2020 2.022527 AGGAGATTAGCTGTCCTTCCCT 60.023 50.000 0.00 0.00 45.21 4.20
670 2021 2.403561 AGGAGATTAGCTGTCCTTCCC 58.596 52.381 0.00 0.00 45.21 3.97
671 2022 4.219919 ACTAGGAGATTAGCTGTCCTTCC 58.780 47.826 12.41 7.34 45.21 3.46
672 2023 5.862678 AACTAGGAGATTAGCTGTCCTTC 57.137 43.478 12.41 0.00 45.21 3.46
673 2024 7.565398 TGATAAACTAGGAGATTAGCTGTCCTT 59.435 37.037 12.41 0.65 45.21 3.36
675 2026 7.291411 TGATAAACTAGGAGATTAGCTGTCC 57.709 40.000 0.00 0.00 37.58 4.02
676 2027 9.418045 GATTGATAAACTAGGAGATTAGCTGTC 57.582 37.037 0.00 0.00 0.00 3.51
677 2028 8.928448 TGATTGATAAACTAGGAGATTAGCTGT 58.072 33.333 0.00 0.00 0.00 4.40
678 2029 9.941325 ATGATTGATAAACTAGGAGATTAGCTG 57.059 33.333 0.00 0.00 0.00 4.24
728 2079 4.873827 AGCGGTCTTATTATCTCGCAAAAA 59.126 37.500 8.17 0.00 44.67 1.94
729 2080 4.439057 AGCGGTCTTATTATCTCGCAAAA 58.561 39.130 8.17 0.00 44.67 2.44
730 2081 4.054780 AGCGGTCTTATTATCTCGCAAA 57.945 40.909 8.17 0.00 44.67 3.68
731 2082 3.728076 AGCGGTCTTATTATCTCGCAA 57.272 42.857 8.17 0.00 44.67 4.85
732 2083 3.819337 AGTAGCGGTCTTATTATCTCGCA 59.181 43.478 8.17 0.00 44.67 5.10
733 2084 4.422546 AGTAGCGGTCTTATTATCTCGC 57.577 45.455 0.00 0.00 42.91 5.03
734 2085 4.617645 GCAAGTAGCGGTCTTATTATCTCG 59.382 45.833 0.00 0.00 0.00 4.04
761 2112 1.061262 CGACACATTGTGCACATGCG 61.061 55.000 22.39 18.12 45.83 4.73
818 4036 5.063204 TGTTATGTATGCAGGTTCTATGGC 58.937 41.667 0.00 0.00 0.00 4.40
835 4053 4.141620 ACTGCTGGGTAGGATCTTGTTATG 60.142 45.833 0.00 0.00 0.00 1.90
874 4092 4.722220 TGAGATGGGAAATATGGCTCTTG 58.278 43.478 0.00 0.00 0.00 3.02
904 4122 3.921677 TCGACAAAGTTGGGTATGACTC 58.078 45.455 0.00 0.00 0.00 3.36
1030 4248 1.156645 GGCAGCCGATGTCTGTCATC 61.157 60.000 0.00 5.03 46.68 2.92
1361 4580 3.869272 CAAGGTCTCGCGCCATGC 61.869 66.667 0.00 0.00 41.47 4.06
1393 4612 1.949257 CACCAAAGCCGTGGAAGAC 59.051 57.895 10.18 0.00 41.65 3.01
1555 4774 1.615124 TCCCCATGGACGTGGATGT 60.615 57.895 15.22 0.00 42.02 3.06
1579 4798 1.039785 TCTCGGACCTCCTGCATCAG 61.040 60.000 0.00 0.00 0.00 2.90
1892 5111 1.811558 CGCCTCTGATAACCCACATGG 60.812 57.143 0.00 0.00 41.37 3.66
1945 5164 0.040157 CCGTCGGTGTTCTCACGTAA 60.040 55.000 2.08 0.00 44.68 3.18
2310 5529 2.202492 CTCGTGTCCTCCGCTTCG 60.202 66.667 0.00 0.00 0.00 3.79
2315 5534 1.658686 CTTCCTCCTCGTGTCCTCCG 61.659 65.000 0.00 0.00 0.00 4.63
2324 5543 3.087666 GCCAGAGCCTTCCTCCTCG 62.088 68.421 0.00 0.00 41.74 4.63
2368 5587 0.974383 GACGACTCCCCTTCCTTCAA 59.026 55.000 0.00 0.00 0.00 2.69
2379 5598 3.120786 CCAAATTGTTGTACGACGACTCC 60.121 47.826 5.24 0.00 33.63 3.85
2381 5600 3.719924 TCCAAATTGTTGTACGACGACT 58.280 40.909 5.24 0.00 33.63 4.18
2400 5619 4.583871 ACACAGACTGAATCAATTCCTCC 58.416 43.478 10.08 0.00 35.97 4.30
2460 5680 9.844257 ATTATCTAAGACTGCTCAGCTATTTTT 57.156 29.630 0.00 0.00 0.00 1.94
2461 5681 9.270640 CATTATCTAAGACTGCTCAGCTATTTT 57.729 33.333 0.00 0.00 0.00 1.82
2462 5682 7.877097 CCATTATCTAAGACTGCTCAGCTATTT 59.123 37.037 0.00 0.00 0.00 1.40
2463 5683 7.385267 CCATTATCTAAGACTGCTCAGCTATT 58.615 38.462 0.00 0.00 0.00 1.73
2464 5684 6.574073 GCCATTATCTAAGACTGCTCAGCTAT 60.574 42.308 0.00 0.00 0.00 2.97
2465 5685 5.279206 GCCATTATCTAAGACTGCTCAGCTA 60.279 44.000 0.00 0.00 0.00 3.32
2466 5686 4.502950 GCCATTATCTAAGACTGCTCAGCT 60.503 45.833 0.00 0.00 0.00 4.24
2467 5687 3.745458 GCCATTATCTAAGACTGCTCAGC 59.255 47.826 0.00 0.00 0.00 4.26
2505 5725 6.923012 ACTGCAGCAACAATCAATATACAAA 58.077 32.000 15.27 0.00 0.00 2.83
2508 5728 9.817365 CTTATACTGCAGCAACAATCAATATAC 57.183 33.333 15.27 0.00 0.00 1.47
2509 5729 8.506437 GCTTATACTGCAGCAACAATCAATATA 58.494 33.333 15.27 1.53 35.95 0.86
2510 5730 7.365741 GCTTATACTGCAGCAACAATCAATAT 58.634 34.615 15.27 2.54 35.95 1.28
2514 5734 3.378112 GGCTTATACTGCAGCAACAATCA 59.622 43.478 15.27 0.00 37.81 2.57
2522 5742 3.118542 GCATTTTGGCTTATACTGCAGC 58.881 45.455 15.27 0.00 35.07 5.25
2578 5870 5.365619 TGGTAGAAAGTCAAGAGGTGAAAC 58.634 41.667 0.00 0.00 38.23 2.78
2579 5871 5.623956 TGGTAGAAAGTCAAGAGGTGAAA 57.376 39.130 0.00 0.00 38.23 2.69
2580 5872 5.623956 TTGGTAGAAAGTCAAGAGGTGAA 57.376 39.130 0.00 0.00 38.23 3.18
2581 5873 5.365619 GTTTGGTAGAAAGTCAAGAGGTGA 58.634 41.667 0.00 0.00 0.00 4.02
2582 5874 4.515567 GGTTTGGTAGAAAGTCAAGAGGTG 59.484 45.833 0.00 0.00 0.00 4.00
2583 5875 4.445879 GGGTTTGGTAGAAAGTCAAGAGGT 60.446 45.833 0.00 0.00 0.00 3.85
2623 5915 2.751259 GGAGGGATTTCCGTTAAACACC 59.249 50.000 0.00 0.00 41.52 4.16
2645 5937 0.687354 AGACACTTGTTCTGGGCGAT 59.313 50.000 0.00 0.00 0.00 4.58
2655 5947 5.773176 CCCCCATAAAACTTTAGACACTTGT 59.227 40.000 0.00 0.00 0.00 3.16
2657 5949 4.770531 GCCCCCATAAAACTTTAGACACTT 59.229 41.667 0.00 0.00 0.00 3.16
2659 5951 4.341487 AGCCCCCATAAAACTTTAGACAC 58.659 43.478 0.00 0.00 0.00 3.67
2660 5952 4.668138 AGCCCCCATAAAACTTTAGACA 57.332 40.909 0.00 0.00 0.00 3.41
2662 5954 5.198207 GCTAAGCCCCCATAAAACTTTAGA 58.802 41.667 0.00 0.00 0.00 2.10
2663 5955 4.953579 TGCTAAGCCCCCATAAAACTTTAG 59.046 41.667 0.00 0.00 0.00 1.85
2664 5956 4.707934 GTGCTAAGCCCCCATAAAACTTTA 59.292 41.667 0.00 0.00 0.00 1.85
2665 5957 3.513912 GTGCTAAGCCCCCATAAAACTTT 59.486 43.478 0.00 0.00 0.00 2.66
2666 5958 3.096852 GTGCTAAGCCCCCATAAAACTT 58.903 45.455 0.00 0.00 0.00 2.66
2667 5959 2.735151 GTGCTAAGCCCCCATAAAACT 58.265 47.619 0.00 0.00 0.00 2.66
2668 5960 1.404035 CGTGCTAAGCCCCCATAAAAC 59.596 52.381 0.00 0.00 0.00 2.43
2669 5961 1.282447 TCGTGCTAAGCCCCCATAAAA 59.718 47.619 0.00 0.00 0.00 1.52
2670 5962 0.913205 TCGTGCTAAGCCCCCATAAA 59.087 50.000 0.00 0.00 0.00 1.40
2671 5963 0.179468 GTCGTGCTAAGCCCCCATAA 59.821 55.000 0.00 0.00 0.00 1.90
2672 5964 1.827394 GTCGTGCTAAGCCCCCATA 59.173 57.895 0.00 0.00 0.00 2.74
2673 5965 2.590092 GTCGTGCTAAGCCCCCAT 59.410 61.111 0.00 0.00 0.00 4.00
2674 5966 4.077184 CGTCGTGCTAAGCCCCCA 62.077 66.667 0.00 0.00 0.00 4.96
2675 5967 3.766691 TCGTCGTGCTAAGCCCCC 61.767 66.667 0.00 0.00 0.00 5.40
2676 5968 2.502692 AAGTCGTCGTGCTAAGCCCC 62.503 60.000 0.00 0.00 0.00 5.80
2677 5969 0.669625 AAAGTCGTCGTGCTAAGCCC 60.670 55.000 0.00 0.00 0.00 5.19
2678 5970 1.126296 GAAAAGTCGTCGTGCTAAGCC 59.874 52.381 0.00 0.00 0.00 4.35
2679 5971 1.201672 CGAAAAGTCGTCGTGCTAAGC 60.202 52.381 0.00 0.00 42.53 3.09
2680 5972 2.745886 CGAAAAGTCGTCGTGCTAAG 57.254 50.000 0.00 0.00 42.53 2.18
2691 5983 8.961294 TTGTTGTAGTAGATAGTCGAAAAGTC 57.039 34.615 0.00 0.00 0.00 3.01
2692 5984 8.574737 ACTTGTTGTAGTAGATAGTCGAAAAGT 58.425 33.333 0.00 0.00 0.00 2.66
2693 5985 8.967552 ACTTGTTGTAGTAGATAGTCGAAAAG 57.032 34.615 0.00 0.00 0.00 2.27
2694 5986 9.754382 AAACTTGTTGTAGTAGATAGTCGAAAA 57.246 29.630 0.00 0.00 0.00 2.29
2695 5987 9.754382 AAAACTTGTTGTAGTAGATAGTCGAAA 57.246 29.630 0.00 0.00 0.00 3.46
2696 5988 9.188588 CAAAACTTGTTGTAGTAGATAGTCGAA 57.811 33.333 0.00 0.00 0.00 3.71
2697 5989 8.355169 ACAAAACTTGTTGTAGTAGATAGTCGA 58.645 33.333 0.00 0.00 42.22 4.20
2698 5990 8.516811 ACAAAACTTGTTGTAGTAGATAGTCG 57.483 34.615 0.00 0.00 42.22 4.18
2699 5991 8.923683 GGACAAAACTTGTTGTAGTAGATAGTC 58.076 37.037 0.00 0.00 45.52 2.59
2700 5992 7.597743 CGGACAAAACTTGTTGTAGTAGATAGT 59.402 37.037 0.00 0.00 45.52 2.12
2701 5993 7.811236 TCGGACAAAACTTGTTGTAGTAGATAG 59.189 37.037 0.00 0.00 45.52 2.08
2702 5994 7.596248 GTCGGACAAAACTTGTTGTAGTAGATA 59.404 37.037 2.62 0.00 45.52 1.98
2703 5995 6.423001 GTCGGACAAAACTTGTTGTAGTAGAT 59.577 38.462 2.62 0.00 45.52 1.98
2704 5996 5.750067 GTCGGACAAAACTTGTTGTAGTAGA 59.250 40.000 2.62 0.00 45.52 2.59
2705 5997 5.751990 AGTCGGACAAAACTTGTTGTAGTAG 59.248 40.000 11.27 0.00 45.52 2.57
2706 5998 5.663456 AGTCGGACAAAACTTGTTGTAGTA 58.337 37.500 11.27 0.00 45.52 1.82
2707 5999 4.510571 AGTCGGACAAAACTTGTTGTAGT 58.489 39.130 11.27 0.00 45.52 2.73
2708 6000 4.025145 GGAGTCGGACAAAACTTGTTGTAG 60.025 45.833 11.27 0.00 45.52 2.74
2709 6001 3.872771 GGAGTCGGACAAAACTTGTTGTA 59.127 43.478 11.27 0.00 45.52 2.41
2710 6002 2.681344 GGAGTCGGACAAAACTTGTTGT 59.319 45.455 11.27 0.00 45.52 3.32
2711 6003 2.286184 CGGAGTCGGACAAAACTTGTTG 60.286 50.000 11.27 0.00 45.52 3.33
2712 6004 1.937899 CGGAGTCGGACAAAACTTGTT 59.062 47.619 11.27 0.00 45.52 2.83
2738 6030 2.187946 CGCTGTCATGGTCCCTCC 59.812 66.667 0.00 0.00 0.00 4.30
2739 6031 2.187946 CCGCTGTCATGGTCCCTC 59.812 66.667 0.00 0.00 0.00 4.30
2740 6032 4.101448 GCCGCTGTCATGGTCCCT 62.101 66.667 0.00 0.00 0.00 4.20
2742 6034 4.760047 ACGCCGCTGTCATGGTCC 62.760 66.667 0.00 0.00 0.00 4.46
2743 6035 3.490759 CACGCCGCTGTCATGGTC 61.491 66.667 0.00 0.00 0.00 4.02
2747 6039 4.704833 AAGGCACGCCGCTGTCAT 62.705 61.111 1.61 0.00 41.91 3.06
2762 6054 0.666274 TACACGCACTGAAGCCGAAG 60.666 55.000 0.00 0.00 0.00 3.79
2763 6055 0.666274 CTACACGCACTGAAGCCGAA 60.666 55.000 0.00 0.00 0.00 4.30
2764 6056 1.080772 CTACACGCACTGAAGCCGA 60.081 57.895 0.00 0.00 0.00 5.54
2765 6057 1.344942 GACTACACGCACTGAAGCCG 61.345 60.000 0.00 0.00 0.00 5.52
2766 6058 1.344942 CGACTACACGCACTGAAGCC 61.345 60.000 0.00 0.00 0.00 4.35
2767 6059 0.663568 ACGACTACACGCACTGAAGC 60.664 55.000 0.00 0.00 36.70 3.86
2768 6060 1.328439 GACGACTACACGCACTGAAG 58.672 55.000 0.00 0.00 36.70 3.02
2769 6061 0.385098 CGACGACTACACGCACTGAA 60.385 55.000 0.00 0.00 36.70 3.02
2770 6062 1.205820 CGACGACTACACGCACTGA 59.794 57.895 0.00 0.00 36.70 3.41
2771 6063 3.737182 CGACGACTACACGCACTG 58.263 61.111 0.00 0.00 36.70 3.66
2776 6068 0.247576 CACCTAGCGACGACTACACG 60.248 60.000 0.00 0.00 39.31 4.49
2777 6069 0.098376 CCACCTAGCGACGACTACAC 59.902 60.000 0.00 0.00 0.00 2.90
2778 6070 0.321919 ACCACCTAGCGACGACTACA 60.322 55.000 0.00 0.00 0.00 2.74
2779 6071 0.807496 AACCACCTAGCGACGACTAC 59.193 55.000 0.00 0.00 0.00 2.73
2780 6072 1.538047 AAACCACCTAGCGACGACTA 58.462 50.000 0.00 0.00 0.00 2.59
2781 6073 1.200948 GTAAACCACCTAGCGACGACT 59.799 52.381 0.00 0.00 0.00 4.18
2782 6074 1.200948 AGTAAACCACCTAGCGACGAC 59.799 52.381 0.00 0.00 0.00 4.34
2783 6075 1.200716 CAGTAAACCACCTAGCGACGA 59.799 52.381 0.00 0.00 0.00 4.20
2784 6076 1.200716 TCAGTAAACCACCTAGCGACG 59.799 52.381 0.00 0.00 0.00 5.12
2785 6077 3.130693 AGATCAGTAAACCACCTAGCGAC 59.869 47.826 0.00 0.00 0.00 5.19
2786 6078 3.130516 CAGATCAGTAAACCACCTAGCGA 59.869 47.826 0.00 0.00 0.00 4.93
2787 6079 3.448686 CAGATCAGTAAACCACCTAGCG 58.551 50.000 0.00 0.00 0.00 4.26
2788 6080 3.451178 TCCAGATCAGTAAACCACCTAGC 59.549 47.826 0.00 0.00 0.00 3.42
2789 6081 5.129485 ACATCCAGATCAGTAAACCACCTAG 59.871 44.000 0.00 0.00 0.00 3.02
2790 6082 5.030147 ACATCCAGATCAGTAAACCACCTA 58.970 41.667 0.00 0.00 0.00 3.08
2791 6083 3.846588 ACATCCAGATCAGTAAACCACCT 59.153 43.478 0.00 0.00 0.00 4.00
2792 6084 4.222124 ACATCCAGATCAGTAAACCACC 57.778 45.455 0.00 0.00 0.00 4.61
2793 6085 7.865706 AATTACATCCAGATCAGTAAACCAC 57.134 36.000 0.00 0.00 31.11 4.16
2794 6086 8.877864 AAAATTACATCCAGATCAGTAAACCA 57.122 30.769 0.00 0.00 31.11 3.67
2795 6087 8.956426 TGAAAATTACATCCAGATCAGTAAACC 58.044 33.333 0.00 0.00 31.11 3.27
2815 6107 9.528018 ACAACGAACACTGAAAATAATGAAAAT 57.472 25.926 0.00 0.00 0.00 1.82
2816 6108 8.918961 ACAACGAACACTGAAAATAATGAAAA 57.081 26.923 0.00 0.00 0.00 2.29
2817 6109 9.440784 GTACAACGAACACTGAAAATAATGAAA 57.559 29.630 0.00 0.00 0.00 2.69
2818 6110 8.832521 AGTACAACGAACACTGAAAATAATGAA 58.167 29.630 0.00 0.00 0.00 2.57
2819 6111 8.373048 AGTACAACGAACACTGAAAATAATGA 57.627 30.769 0.00 0.00 0.00 2.57
2820 6112 9.525007 GTAGTACAACGAACACTGAAAATAATG 57.475 33.333 0.00 0.00 0.00 1.90
2821 6113 8.715088 GGTAGTACAACGAACACTGAAAATAAT 58.285 33.333 2.06 0.00 0.00 1.28
2822 6114 7.710044 TGGTAGTACAACGAACACTGAAAATAA 59.290 33.333 2.06 0.00 0.00 1.40
2823 6115 7.208777 TGGTAGTACAACGAACACTGAAAATA 58.791 34.615 2.06 0.00 0.00 1.40
2824 6116 6.050432 TGGTAGTACAACGAACACTGAAAAT 58.950 36.000 2.06 0.00 0.00 1.82
2825 6117 5.417811 TGGTAGTACAACGAACACTGAAAA 58.582 37.500 2.06 0.00 0.00 2.29
2826 6118 5.008619 TGGTAGTACAACGAACACTGAAA 57.991 39.130 2.06 0.00 0.00 2.69
2827 6119 4.652421 TGGTAGTACAACGAACACTGAA 57.348 40.909 2.06 0.00 0.00 3.02
2828 6120 4.278919 TCATGGTAGTACAACGAACACTGA 59.721 41.667 2.06 0.00 0.00 3.41
2829 6121 4.552355 TCATGGTAGTACAACGAACACTG 58.448 43.478 2.06 0.00 0.00 3.66
2830 6122 4.859304 TCATGGTAGTACAACGAACACT 57.141 40.909 2.06 0.00 0.00 3.55
2831 6123 5.636121 TCAATCATGGTAGTACAACGAACAC 59.364 40.000 2.06 0.00 0.00 3.32
2832 6124 5.785243 TCAATCATGGTAGTACAACGAACA 58.215 37.500 2.06 0.00 0.00 3.18
2833 6125 6.588756 TCTTCAATCATGGTAGTACAACGAAC 59.411 38.462 2.06 0.00 0.00 3.95
2834 6126 6.693466 TCTTCAATCATGGTAGTACAACGAA 58.307 36.000 2.06 0.00 0.00 3.85
2835 6127 6.275494 TCTTCAATCATGGTAGTACAACGA 57.725 37.500 2.06 0.00 0.00 3.85
2836 6128 7.539712 AATCTTCAATCATGGTAGTACAACG 57.460 36.000 2.06 0.00 0.00 4.10
2889 6181 6.349363 GGACTTCAGACACTTGTTCAGTTTTT 60.349 38.462 0.00 0.00 30.92 1.94
2890 6182 5.123979 GGACTTCAGACACTTGTTCAGTTTT 59.876 40.000 0.00 0.00 30.92 2.43
2891 6183 4.636206 GGACTTCAGACACTTGTTCAGTTT 59.364 41.667 0.00 0.00 30.92 2.66
2892 6184 4.192317 GGACTTCAGACACTTGTTCAGTT 58.808 43.478 0.00 0.00 30.92 3.16
2893 6185 3.738281 CGGACTTCAGACACTTGTTCAGT 60.738 47.826 0.00 0.00 35.35 3.41
2919 6211 2.354403 GCCCTTAAGTTTAGTGCGAGGA 60.354 50.000 0.97 0.00 0.00 3.71
2920 6212 2.007608 GCCCTTAAGTTTAGTGCGAGG 58.992 52.381 0.97 0.00 0.00 4.63
2924 6216 3.010420 CCTGAGCCCTTAAGTTTAGTGC 58.990 50.000 0.97 0.00 0.00 4.40
2933 6227 1.202830 TCGTTTTGCCTGAGCCCTTAA 60.203 47.619 0.00 0.00 38.69 1.85
2936 6230 0.890996 CTTCGTTTTGCCTGAGCCCT 60.891 55.000 0.00 0.00 38.69 5.19
2941 6235 2.360483 TGATTTGCTTCGTTTTGCCTGA 59.640 40.909 0.00 0.00 0.00 3.86
2949 6243 2.513753 TCATGGGTGATTTGCTTCGTT 58.486 42.857 0.00 0.00 0.00 3.85
2950 6244 2.198827 TCATGGGTGATTTGCTTCGT 57.801 45.000 0.00 0.00 0.00 3.85
2966 6260 5.357878 TCCTCGCTTGCTATTTCATTTTCAT 59.642 36.000 0.00 0.00 0.00 2.57
2975 6269 4.338400 GGGTATTTTCCTCGCTTGCTATTT 59.662 41.667 0.00 0.00 0.00 1.40
3004 6298 2.224992 ACTGGGCCACATACACATTTCA 60.225 45.455 0.00 0.00 0.00 2.69
3113 6407 6.767524 TTCATGTACTTTTTCTTGGTGTGT 57.232 33.333 0.00 0.00 0.00 3.72
3124 6418 8.472007 TTGTTGGGAGTATTTCATGTACTTTT 57.528 30.769 0.00 0.00 32.77 2.27
3138 6434 3.572255 GCACATTTCCTTTGTTGGGAGTA 59.428 43.478 0.00 0.00 34.06 2.59
3157 6453 4.704057 AGGATTGAAGAAGGATTTCTGCAC 59.296 41.667 0.00 0.00 46.46 4.57
3181 6479 1.754226 GGTCAATGTGTTGGTGGTTGT 59.246 47.619 0.00 0.00 35.99 3.32
3208 6506 1.601419 GACGATGGAGGTGGTCGGAA 61.601 60.000 0.00 0.00 39.53 4.30
3210 6508 2.494918 GACGATGGAGGTGGTCGG 59.505 66.667 0.00 0.00 39.53 4.79
3219 6517 3.515286 GGACGCTCCGACGATGGA 61.515 66.667 0.00 0.00 36.70 3.41
3240 6681 4.691326 AAGACCGTTTCTTCTCCTCTTT 57.309 40.909 0.00 0.00 40.98 2.52
3261 6702 5.241403 TCTCTTGGATTTTGGCTTAGTGA 57.759 39.130 0.00 0.00 0.00 3.41
3330 6771 2.731587 AAGTGCGACACCATTTGCGC 62.732 55.000 0.00 0.00 45.33 6.09
3334 6775 0.586319 CGACAAGTGCGACACCATTT 59.414 50.000 6.39 0.00 34.49 2.32
3337 6778 1.590525 GACGACAAGTGCGACACCA 60.591 57.895 6.39 0.00 34.49 4.17
3340 6781 0.943835 CCATGACGACAAGTGCGACA 60.944 55.000 0.00 0.00 37.75 4.35
3342 6783 0.246360 ATCCATGACGACAAGTGCGA 59.754 50.000 0.00 0.00 0.00 5.10
3355 6796 1.451207 TTCCGGGCGACAATCCATG 60.451 57.895 0.00 0.00 0.00 3.66
3356 6797 1.451387 GTTCCGGGCGACAATCCAT 60.451 57.895 0.00 0.00 0.00 3.41
3360 6801 0.808755 GATTTGTTCCGGGCGACAAT 59.191 50.000 16.08 9.08 35.85 2.71
3367 6808 0.037590 TGGTGGAGATTTGTTCCGGG 59.962 55.000 0.00 0.00 37.54 5.73
3386 6827 1.682684 AGGGTCGCGATCCAAGAGT 60.683 57.895 38.03 16.46 32.73 3.24
3405 6846 2.673833 ACATCGTCGTTCAAGACCTTC 58.326 47.619 0.00 0.00 37.85 3.46
3413 6854 3.086818 TCTTGACAACATCGTCGTTCA 57.913 42.857 0.00 0.00 38.84 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.