Multiple sequence alignment - TraesCS2B01G392800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G392800 chr2B 100.000 4926 0 0 1 4926 557047776 557042851 0.000000e+00 9097.0
1 TraesCS2B01G392800 chr2B 93.238 281 18 1 4643 4923 462915366 462915645 3.550000e-111 412.0
2 TraesCS2B01G392800 chr2B 92.982 285 17 3 4643 4926 719214517 719214235 3.550000e-111 412.0
3 TraesCS2B01G392800 chr2D 94.331 2999 151 15 824 3809 476278422 476275430 0.000000e+00 4578.0
4 TraesCS2B01G392800 chr2D 86.646 644 70 8 3984 4612 528618282 528617640 0.000000e+00 699.0
5 TraesCS2B01G392800 chr2D 85.294 204 28 2 617 819 370983939 370983737 5.000000e-50 209.0
6 TraesCS2B01G392800 chr2D 91.429 105 7 2 3882 3985 476275429 476275326 5.140000e-30 143.0
7 TraesCS2B01G392800 chr2A 94.163 3015 147 20 815 3809 618117751 618114746 0.000000e+00 4566.0
8 TraesCS2B01G392800 chr2A 83.130 575 58 16 4043 4601 266486 267037 5.730000e-134 488.0
9 TraesCS2B01G392800 chr2A 79.478 575 101 14 32 598 607510954 607511519 4.620000e-105 392.0
10 TraesCS2B01G392800 chr2A 93.333 105 6 1 3882 3985 618114745 618114641 2.370000e-33 154.0
11 TraesCS2B01G392800 chr3B 96.028 579 21 1 38 614 104503396 104503974 0.000000e+00 941.0
12 TraesCS2B01G392800 chr3B 83.099 284 30 9 3979 4256 225185238 225184967 4.930000e-60 243.0
13 TraesCS2B01G392800 chrUn 91.234 616 48 4 1 611 69827685 69828299 0.000000e+00 833.0
14 TraesCS2B01G392800 chr6D 87.854 601 58 15 1 593 292716367 292716960 0.000000e+00 691.0
15 TraesCS2B01G392800 chr5B 88.579 394 33 4 4185 4571 452206365 452205977 7.470000e-128 468.0
16 TraesCS2B01G392800 chr5B 93.950 281 17 0 4643 4923 3757572 3757852 4.560000e-115 425.0
17 TraesCS2B01G392800 chr5B 84.375 352 37 14 267 610 591099592 591099933 3.680000e-86 329.0
18 TraesCS2B01G392800 chr5B 80.779 411 61 16 203 604 302831293 302830892 6.190000e-79 305.0
19 TraesCS2B01G392800 chr5B 92.265 181 12 1 3983 4161 452224519 452224339 6.330000e-64 255.0
20 TraesCS2B01G392800 chr5B 100.000 29 0 0 3811 3839 666185742 666185714 2.000000e-03 54.7
21 TraesCS2B01G392800 chr3D 80.923 650 68 15 3985 4606 164984339 164983718 3.470000e-126 462.0
22 TraesCS2B01G392800 chr3D 82.042 284 33 8 3979 4256 156255326 156255597 4.960000e-55 226.0
23 TraesCS2B01G392800 chr4B 80.333 661 78 15 3983 4610 49980073 49979432 2.090000e-123 453.0
24 TraesCS2B01G392800 chr4B 93.929 280 17 0 4644 4923 86971429 86971150 1.640000e-114 424.0
25 TraesCS2B01G392800 chr4B 84.390 205 27 5 408 610 577027012 577027213 3.890000e-46 196.0
26 TraesCS2B01G392800 chr5A 80.331 605 100 16 4 598 568570464 568569869 1.630000e-119 440.0
27 TraesCS2B01G392800 chr5A 86.512 215 25 4 617 828 526587708 526587495 2.960000e-57 233.0
28 TraesCS2B01G392800 chr5A 86.070 201 26 2 617 816 626959785 626959984 1.070000e-51 215.0
29 TraesCS2B01G392800 chr5A 78.966 290 36 12 3987 4251 535011113 535011402 1.820000e-39 174.0
30 TraesCS2B01G392800 chr1B 93.993 283 16 1 4644 4926 42002702 42002421 1.270000e-115 427.0
31 TraesCS2B01G392800 chr1B 93.929 280 17 0 4644 4923 494315666 494315945 1.640000e-114 424.0
32 TraesCS2B01G392800 chr1B 100.000 29 0 0 3808 3836 607690261 607690233 2.000000e-03 54.7
33 TraesCS2B01G392800 chr1B 100.000 28 0 0 3812 3839 37756134 37756161 9.000000e-03 52.8
34 TraesCS2B01G392800 chr7B 93.662 284 17 1 4643 4926 100251163 100250881 1.640000e-114 424.0
35 TraesCS2B01G392800 chr7B 93.617 282 16 2 4643 4923 711052744 711053024 2.120000e-113 420.0
36 TraesCS2B01G392800 chr7B 85.163 337 37 8 280 610 122663418 122663089 2.840000e-87 333.0
37 TraesCS2B01G392800 chr7B 94.595 37 1 1 3801 3836 563475952 563475988 6.890000e-04 56.5
38 TraesCS2B01G392800 chr7B 94.595 37 1 1 3801 3836 563658970 563659006 6.890000e-04 56.5
39 TraesCS2B01G392800 chr6B 93.594 281 18 0 4643 4923 520481215 520481495 2.120000e-113 420.0
40 TraesCS2B01G392800 chr6B 86.567 201 25 2 617 816 519723209 519723408 2.310000e-53 220.0
41 TraesCS2B01G392800 chr6B 100.000 29 0 0 3808 3836 3754297 3754325 2.000000e-03 54.7
42 TraesCS2B01G392800 chr4D 79.126 412 70 14 203 607 493753516 493753918 2.260000e-68 270.0
43 TraesCS2B01G392800 chr4D 85.784 204 27 2 617 819 324843343 324843141 1.070000e-51 215.0
44 TraesCS2B01G392800 chr4D 84.878 205 27 4 617 819 449199096 449198894 2.320000e-48 204.0
45 TraesCS2B01G392800 chr4D 100.000 28 0 0 3809 3836 485409439 485409412 9.000000e-03 52.8
46 TraesCS2B01G392800 chr3A 82.394 284 32 9 3979 4256 175955542 175955813 1.070000e-56 231.0
47 TraesCS2B01G392800 chr3A 85.572 201 27 2 617 816 368974490 368974689 5.000000e-50 209.0
48 TraesCS2B01G392800 chr3A 77.833 203 29 7 615 816 95481438 95481625 1.450000e-20 111.0
49 TraesCS2B01G392800 chr7D 86.207 203 22 6 617 816 441858455 441858654 1.070000e-51 215.0
50 TraesCS2B01G392800 chr7D 93.878 98 6 0 21 118 108415476 108415379 1.100000e-31 148.0
51 TraesCS2B01G392800 chr5D 86.070 201 24 4 617 815 280638472 280638274 3.860000e-51 213.0
52 TraesCS2B01G392800 chr7A 93.478 92 6 0 27 118 113372929 113372838 2.390000e-28 137.0
53 TraesCS2B01G392800 chr7A 94.595 37 1 1 3801 3836 606635684 606635720 6.890000e-04 56.5
54 TraesCS2B01G392800 chr1D 84.270 89 12 2 3976 4063 176924854 176924941 8.790000e-13 86.1
55 TraesCS2B01G392800 chr4A 95.122 41 1 1 615 654 112768314 112768354 4.120000e-06 63.9
56 TraesCS2B01G392800 chr1A 100.000 28 0 0 3809 3836 504710449 504710422 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G392800 chr2B 557042851 557047776 4925 True 9097.0 9097 100.000 1 4926 1 chr2B.!!$R1 4925
1 TraesCS2B01G392800 chr2D 476275326 476278422 3096 True 2360.5 4578 92.880 824 3985 2 chr2D.!!$R3 3161
2 TraesCS2B01G392800 chr2D 528617640 528618282 642 True 699.0 699 86.646 3984 4612 1 chr2D.!!$R2 628
3 TraesCS2B01G392800 chr2A 618114641 618117751 3110 True 2360.0 4566 93.748 815 3985 2 chr2A.!!$R1 3170
4 TraesCS2B01G392800 chr2A 266486 267037 551 False 488.0 488 83.130 4043 4601 1 chr2A.!!$F1 558
5 TraesCS2B01G392800 chr2A 607510954 607511519 565 False 392.0 392 79.478 32 598 1 chr2A.!!$F2 566
6 TraesCS2B01G392800 chr3B 104503396 104503974 578 False 941.0 941 96.028 38 614 1 chr3B.!!$F1 576
7 TraesCS2B01G392800 chrUn 69827685 69828299 614 False 833.0 833 91.234 1 611 1 chrUn.!!$F1 610
8 TraesCS2B01G392800 chr6D 292716367 292716960 593 False 691.0 691 87.854 1 593 1 chr6D.!!$F1 592
9 TraesCS2B01G392800 chr3D 164983718 164984339 621 True 462.0 462 80.923 3985 4606 1 chr3D.!!$R1 621
10 TraesCS2B01G392800 chr4B 49979432 49980073 641 True 453.0 453 80.333 3983 4610 1 chr4B.!!$R1 627
11 TraesCS2B01G392800 chr5A 568569869 568570464 595 True 440.0 440 80.331 4 598 1 chr5A.!!$R2 594

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
671 682 0.184692 TGGGTGGATGTGCAGTTTCA 59.815 50.000 0.0 0.0 0.0 2.69 F
1555 1568 0.038618 GGCTTGCTTTTACCCGTTGG 60.039 55.000 0.0 0.0 37.8 3.77 F
1853 1867 2.032620 TCCTTCCGCTGTAATCTCCTC 58.967 52.381 0.0 0.0 0.0 3.71 F
1855 1869 2.035321 CCTTCCGCTGTAATCTCCTCTC 59.965 54.545 0.0 0.0 0.0 3.20 F
3358 3380 0.811219 CGGCAGCGGATGATTTGAGA 60.811 55.000 0.0 0.0 0.0 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1758 1772 0.109226 GGTCGTCACTACTGACAGCC 60.109 60.000 1.25 1.45 46.47 4.85 R
3171 3193 1.556911 TCTGGATCAGGCTTCTGGAAC 59.443 52.381 0.00 0.00 38.96 3.62 R
3186 3208 1.915489 ACAGGTGGTATTGCATCTGGA 59.085 47.619 0.00 0.00 0.00 3.86 R
3491 3515 1.951895 GCCATGCACCATCAACTGAGA 60.952 52.381 0.00 0.00 0.00 3.27 R
4886 4988 0.036010 CCTCGTTGCTTCCCTGATGT 60.036 55.000 0.00 0.00 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
192 200 2.024414 GAGAGAGAGAAGTGAGGGAGC 58.976 57.143 0.00 0.00 0.00 4.70
217 225 1.275573 GAAAACCCTAGCCGTCTCACT 59.724 52.381 0.00 0.00 0.00 3.41
237 245 0.533755 CGATTGGGGATGAGTCTGCC 60.534 60.000 0.00 0.00 0.00 4.85
391 401 1.048601 ACACAGAATGACACTCGGGT 58.951 50.000 0.00 0.00 39.69 5.28
468 478 2.782222 CGAGATCGCGGGGGAAGAA 61.782 63.158 11.35 0.00 0.00 2.52
614 625 2.126307 CGCGGGAGTGACTGTCTG 60.126 66.667 9.51 0.00 44.85 3.51
615 626 2.262915 GCGGGAGTGACTGTCTGG 59.737 66.667 9.51 0.00 0.00 3.86
616 627 2.276116 GCGGGAGTGACTGTCTGGA 61.276 63.158 9.51 0.00 0.00 3.86
617 628 1.608717 GCGGGAGTGACTGTCTGGAT 61.609 60.000 9.51 0.00 0.00 3.41
618 629 0.898320 CGGGAGTGACTGTCTGGATT 59.102 55.000 9.51 0.00 0.00 3.01
619 630 1.404717 CGGGAGTGACTGTCTGGATTG 60.405 57.143 9.51 0.00 0.00 2.67
620 631 1.902508 GGGAGTGACTGTCTGGATTGA 59.097 52.381 9.51 0.00 0.00 2.57
621 632 2.354203 GGGAGTGACTGTCTGGATTGAC 60.354 54.545 9.51 0.00 37.47 3.18
622 633 2.564947 GGAGTGACTGTCTGGATTGACT 59.435 50.000 9.51 1.96 37.79 3.41
623 634 3.007398 GGAGTGACTGTCTGGATTGACTT 59.993 47.826 9.51 0.00 37.79 3.01
624 635 3.993081 GAGTGACTGTCTGGATTGACTTG 59.007 47.826 9.51 0.00 37.79 3.16
625 636 2.481952 GTGACTGTCTGGATTGACTTGC 59.518 50.000 9.51 0.00 37.79 4.01
626 637 2.079925 GACTGTCTGGATTGACTTGCC 58.920 52.381 0.00 0.00 37.79 4.52
627 638 1.701847 ACTGTCTGGATTGACTTGCCT 59.298 47.619 0.00 0.00 37.79 4.75
628 639 2.289945 ACTGTCTGGATTGACTTGCCTC 60.290 50.000 0.00 0.00 37.79 4.70
629 640 1.338105 TGTCTGGATTGACTTGCCTCG 60.338 52.381 0.00 0.00 37.79 4.63
630 641 0.976641 TCTGGATTGACTTGCCTCGT 59.023 50.000 0.00 0.00 0.00 4.18
631 642 1.347707 TCTGGATTGACTTGCCTCGTT 59.652 47.619 0.00 0.00 0.00 3.85
632 643 1.734465 CTGGATTGACTTGCCTCGTTC 59.266 52.381 0.00 0.00 0.00 3.95
633 644 1.087501 GGATTGACTTGCCTCGTTCC 58.912 55.000 0.00 0.00 0.00 3.62
634 645 1.339151 GGATTGACTTGCCTCGTTCCT 60.339 52.381 0.00 0.00 0.00 3.36
635 646 2.093658 GGATTGACTTGCCTCGTTCCTA 60.094 50.000 0.00 0.00 0.00 2.94
636 647 2.450609 TTGACTTGCCTCGTTCCTAC 57.549 50.000 0.00 0.00 0.00 3.18
647 658 2.791417 CGTTCCTACGCGCAAAATAA 57.209 45.000 5.73 0.00 41.41 1.40
648 659 2.689635 CGTTCCTACGCGCAAAATAAG 58.310 47.619 5.73 0.00 41.41 1.73
649 660 2.437626 GTTCCTACGCGCAAAATAAGC 58.562 47.619 5.73 0.00 0.00 3.09
650 661 2.018542 TCCTACGCGCAAAATAAGCT 57.981 45.000 5.73 0.00 0.00 3.74
651 662 2.352388 TCCTACGCGCAAAATAAGCTT 58.648 42.857 5.73 3.48 0.00 3.74
652 663 2.745281 TCCTACGCGCAAAATAAGCTTT 59.255 40.909 5.73 0.00 0.00 3.51
653 664 2.845967 CCTACGCGCAAAATAAGCTTTG 59.154 45.455 5.73 0.00 38.97 2.77
654 665 1.696988 ACGCGCAAAATAAGCTTTGG 58.303 45.000 5.73 0.00 36.89 3.28
655 666 0.991344 CGCGCAAAATAAGCTTTGGG 59.009 50.000 8.75 6.41 46.49 4.12
656 667 1.668628 CGCGCAAAATAAGCTTTGGGT 60.669 47.619 8.75 0.00 45.86 4.51
657 668 1.726248 GCGCAAAATAAGCTTTGGGTG 59.274 47.619 3.20 0.00 45.86 4.61
658 669 2.336667 CGCAAAATAAGCTTTGGGTGG 58.663 47.619 3.20 0.00 41.71 4.61
659 670 2.029470 CGCAAAATAAGCTTTGGGTGGA 60.029 45.455 3.20 0.00 41.71 4.02
660 671 3.368323 CGCAAAATAAGCTTTGGGTGGAT 60.368 43.478 3.20 0.00 41.71 3.41
661 672 3.934579 GCAAAATAAGCTTTGGGTGGATG 59.065 43.478 3.20 0.00 36.89 3.51
662 673 4.563374 GCAAAATAAGCTTTGGGTGGATGT 60.563 41.667 3.20 0.00 36.89 3.06
663 674 4.806640 AAATAAGCTTTGGGTGGATGTG 57.193 40.909 3.20 0.00 0.00 3.21
664 675 1.544724 TAAGCTTTGGGTGGATGTGC 58.455 50.000 3.20 0.00 0.00 4.57
665 676 0.469705 AAGCTTTGGGTGGATGTGCA 60.470 50.000 0.00 0.00 0.00 4.57
666 677 0.896940 AGCTTTGGGTGGATGTGCAG 60.897 55.000 0.00 0.00 0.00 4.41
667 678 1.181098 GCTTTGGGTGGATGTGCAGT 61.181 55.000 0.00 0.00 0.00 4.40
668 679 1.331214 CTTTGGGTGGATGTGCAGTT 58.669 50.000 0.00 0.00 0.00 3.16
669 680 1.688197 CTTTGGGTGGATGTGCAGTTT 59.312 47.619 0.00 0.00 0.00 2.66
670 681 1.327303 TTGGGTGGATGTGCAGTTTC 58.673 50.000 0.00 0.00 0.00 2.78
671 682 0.184692 TGGGTGGATGTGCAGTTTCA 59.815 50.000 0.00 0.00 0.00 2.69
672 683 1.203038 TGGGTGGATGTGCAGTTTCAT 60.203 47.619 0.00 0.00 0.00 2.57
673 684 1.474077 GGGTGGATGTGCAGTTTCATC 59.526 52.381 6.50 6.50 39.49 2.92
674 685 2.161855 GGTGGATGTGCAGTTTCATCA 58.838 47.619 14.76 0.00 41.26 3.07
675 686 2.557924 GGTGGATGTGCAGTTTCATCAA 59.442 45.455 14.76 3.21 41.26 2.57
676 687 3.005684 GGTGGATGTGCAGTTTCATCAAA 59.994 43.478 14.76 2.61 41.26 2.69
677 688 4.501229 GGTGGATGTGCAGTTTCATCAAAA 60.501 41.667 14.76 0.58 41.26 2.44
678 689 5.049167 GTGGATGTGCAGTTTCATCAAAAA 58.951 37.500 14.76 0.00 41.26 1.94
679 690 5.049167 TGGATGTGCAGTTTCATCAAAAAC 58.951 37.500 14.76 1.04 41.26 2.43
680 691 5.049167 GGATGTGCAGTTTCATCAAAAACA 58.951 37.500 14.76 0.00 40.77 2.83
681 692 5.050837 GGATGTGCAGTTTCATCAAAAACAC 60.051 40.000 14.76 0.00 40.77 3.32
682 693 4.814147 TGTGCAGTTTCATCAAAAACACA 58.186 34.783 0.00 0.00 40.77 3.72
683 694 4.863689 TGTGCAGTTTCATCAAAAACACAG 59.136 37.500 0.00 0.00 40.77 3.66
684 695 4.268405 GTGCAGTTTCATCAAAAACACAGG 59.732 41.667 0.00 0.00 40.77 4.00
685 696 4.159321 TGCAGTTTCATCAAAAACACAGGA 59.841 37.500 2.73 0.00 40.77 3.86
686 697 5.108517 GCAGTTTCATCAAAAACACAGGAA 58.891 37.500 2.73 0.00 40.77 3.36
687 698 5.232838 GCAGTTTCATCAAAAACACAGGAAG 59.767 40.000 2.73 0.00 40.77 3.46
688 699 6.332630 CAGTTTCATCAAAAACACAGGAAGT 58.667 36.000 2.73 0.00 40.77 3.01
704 715 6.214399 ACAGGAAGTGAGTAGTTTTCTTACG 58.786 40.000 0.00 0.00 0.00 3.18
705 716 6.040166 ACAGGAAGTGAGTAGTTTTCTTACGA 59.960 38.462 0.00 0.00 0.00 3.43
706 717 6.921857 CAGGAAGTGAGTAGTTTTCTTACGAA 59.078 38.462 0.00 0.00 0.00 3.85
707 718 7.437267 CAGGAAGTGAGTAGTTTTCTTACGAAA 59.563 37.037 0.00 0.00 37.36 3.46
708 719 8.148999 AGGAAGTGAGTAGTTTTCTTACGAAAT 58.851 33.333 0.00 0.00 38.81 2.17
709 720 8.771766 GGAAGTGAGTAGTTTTCTTACGAAATT 58.228 33.333 0.00 0.00 38.81 1.82
712 723 9.543783 AGTGAGTAGTTTTCTTACGAAATTTCT 57.456 29.630 15.92 6.09 38.81 2.52
713 724 9.582223 GTGAGTAGTTTTCTTACGAAATTTCTG 57.418 33.333 15.92 11.53 38.81 3.02
714 725 9.321562 TGAGTAGTTTTCTTACGAAATTTCTGT 57.678 29.630 15.92 16.05 38.81 3.41
734 745 9.491675 TTTCTGTATACATTTTCTACAAACCGA 57.508 29.630 5.91 0.00 0.00 4.69
735 746 9.491675 TTCTGTATACATTTTCTACAAACCGAA 57.508 29.630 5.91 0.00 0.00 4.30
736 747 9.661563 TCTGTATACATTTTCTACAAACCGAAT 57.338 29.630 5.91 0.00 0.00 3.34
737 748 9.702726 CTGTATACATTTTCTACAAACCGAATG 57.297 33.333 5.91 0.00 0.00 2.67
738 749 8.178964 TGTATACATTTTCTACAAACCGAATGC 58.821 33.333 0.08 0.00 0.00 3.56
739 750 5.446143 ACATTTTCTACAAACCGAATGCA 57.554 34.783 0.00 0.00 0.00 3.96
740 751 6.024552 ACATTTTCTACAAACCGAATGCAT 57.975 33.333 0.00 0.00 0.00 3.96
741 752 7.151999 ACATTTTCTACAAACCGAATGCATA 57.848 32.000 0.00 0.00 0.00 3.14
742 753 7.771183 ACATTTTCTACAAACCGAATGCATAT 58.229 30.769 0.00 0.00 0.00 1.78
743 754 8.898761 ACATTTTCTACAAACCGAATGCATATA 58.101 29.630 0.00 0.00 0.00 0.86
744 755 9.897744 CATTTTCTACAAACCGAATGCATATAT 57.102 29.630 0.00 0.00 0.00 0.86
747 758 9.990360 TTTCTACAAACCGAATGCATATATAGA 57.010 29.630 0.00 0.00 0.00 1.98
748 759 9.990360 TTCTACAAACCGAATGCATATATAGAA 57.010 29.630 0.00 3.27 0.00 2.10
749 760 9.990360 TCTACAAACCGAATGCATATATAGAAA 57.010 29.630 0.00 0.00 0.00 2.52
795 806 8.757164 ATTTCTATGTTTTTCCCACGAAAATC 57.243 30.769 0.00 0.42 45.16 2.17
796 807 6.262193 TCTATGTTTTTCCCACGAAAATCC 57.738 37.500 0.00 0.00 45.16 3.01
797 808 6.007703 TCTATGTTTTTCCCACGAAAATCCT 58.992 36.000 0.00 0.00 45.16 3.24
798 809 4.577834 TGTTTTTCCCACGAAAATCCTC 57.422 40.909 0.00 0.00 45.16 3.71
799 810 3.319689 TGTTTTTCCCACGAAAATCCTCC 59.680 43.478 0.00 0.00 45.16 4.30
800 811 1.816074 TTTCCCACGAAAATCCTCCG 58.184 50.000 0.00 0.00 35.02 4.63
801 812 0.675522 TTCCCACGAAAATCCTCCGC 60.676 55.000 0.00 0.00 0.00 5.54
802 813 1.376683 CCCACGAAAATCCTCCGCA 60.377 57.895 0.00 0.00 0.00 5.69
803 814 1.644786 CCCACGAAAATCCTCCGCAC 61.645 60.000 0.00 0.00 0.00 5.34
804 815 1.644786 CCACGAAAATCCTCCGCACC 61.645 60.000 0.00 0.00 0.00 5.01
805 816 1.740296 ACGAAAATCCTCCGCACCG 60.740 57.895 0.00 0.00 0.00 4.94
806 817 1.447140 CGAAAATCCTCCGCACCGA 60.447 57.895 0.00 0.00 0.00 4.69
807 818 1.017177 CGAAAATCCTCCGCACCGAA 61.017 55.000 0.00 0.00 0.00 4.30
808 819 0.446616 GAAAATCCTCCGCACCGAAC 59.553 55.000 0.00 0.00 0.00 3.95
809 820 1.296056 AAAATCCTCCGCACCGAACG 61.296 55.000 0.00 0.00 0.00 3.95
810 821 2.162338 AAATCCTCCGCACCGAACGA 62.162 55.000 0.00 0.00 0.00 3.85
811 822 2.558554 AATCCTCCGCACCGAACGAG 62.559 60.000 0.00 0.00 0.00 4.18
812 823 4.796231 CCTCCGCACCGAACGAGG 62.796 72.222 0.00 0.00 37.30 4.63
821 832 0.883370 ACCGAACGAGGCCTCAAAAC 60.883 55.000 31.67 17.69 33.69 2.43
869 880 2.348998 CAAAGCGGGCTCTGTCCT 59.651 61.111 0.00 0.00 0.00 3.85
885 896 2.328099 CCTGCGGCTCAACAACTCC 61.328 63.158 0.00 0.00 0.00 3.85
954 965 1.648467 GGCCCAGTTGCGAGAATCAC 61.648 60.000 0.00 0.00 33.17 3.06
1150 1163 2.851071 GCTACCTCTCCGCATCGCT 61.851 63.158 0.00 0.00 0.00 4.93
1181 1194 4.402528 CCGTCCAACCCCATCGCA 62.403 66.667 0.00 0.00 0.00 5.10
1213 1226 2.593436 ACCCCGTCCGCAGTTTTG 60.593 61.111 0.00 0.00 0.00 2.44
1214 1227 2.593436 CCCCGTCCGCAGTTTTGT 60.593 61.111 0.00 0.00 0.00 2.83
1321 1334 2.913060 GCCGTCTAGATCCGCCCT 60.913 66.667 0.00 0.00 0.00 5.19
1326 1339 1.536284 CGTCTAGATCCGCCCTTGAAC 60.536 57.143 0.00 0.00 0.00 3.18
1353 1366 4.978083 ACCATCGTCTACGTGTTTATCT 57.022 40.909 0.00 0.00 40.80 1.98
1402 1415 3.807538 GCGCCACATCACCTGCTG 61.808 66.667 0.00 0.00 0.00 4.41
1414 1427 1.004610 CACCTGCTGTATGAATTCGCG 60.005 52.381 0.00 0.00 0.00 5.87
1480 1493 3.827302 TCTGTTCTACGCTCCTCTCTTTT 59.173 43.478 0.00 0.00 0.00 2.27
1499 1512 6.346096 TCTTTTCCGATATCCAATTCGTTCT 58.654 36.000 0.00 0.00 33.60 3.01
1555 1568 0.038618 GGCTTGCTTTTACCCGTTGG 60.039 55.000 0.00 0.00 37.80 3.77
1652 1665 4.038883 GTCGCTACATAGGAATTGGTAGGT 59.961 45.833 0.00 0.00 35.05 3.08
1701 1714 6.646267 ACTTGGTTACTTTGTTCAGAGTACA 58.354 36.000 0.00 0.00 0.00 2.90
1705 1718 7.276658 TGGTTACTTTGTTCAGAGTACATGAA 58.723 34.615 0.00 8.90 34.37 2.57
1727 1740 8.268850 TGAAATCTTTTGCCTATAGTGAACTC 57.731 34.615 0.00 0.00 0.00 3.01
1729 1742 8.814038 AAATCTTTTGCCTATAGTGAACTCAT 57.186 30.769 0.00 0.00 0.00 2.90
1737 1750 5.008118 GCCTATAGTGAACTCATTGCTTTCC 59.992 44.000 0.00 0.00 0.00 3.13
1839 1853 4.508662 AGTTCATCGAGTTGAATCCTTCC 58.491 43.478 4.84 0.00 37.88 3.46
1853 1867 2.032620 TCCTTCCGCTGTAATCTCCTC 58.967 52.381 0.00 0.00 0.00 3.71
1855 1869 2.035321 CCTTCCGCTGTAATCTCCTCTC 59.965 54.545 0.00 0.00 0.00 3.20
1884 1898 4.022329 CCCCTTCTTACTTGCACGAAATTT 60.022 41.667 0.00 0.00 0.00 1.82
1885 1899 5.182380 CCCCTTCTTACTTGCACGAAATTTA 59.818 40.000 0.00 0.00 0.00 1.40
1920 1934 2.158769 TGATGGCATGTATGGTGGTCTC 60.159 50.000 3.81 0.00 0.00 3.36
1924 1938 3.071457 TGGCATGTATGGTGGTCTCTATG 59.929 47.826 0.00 0.00 0.00 2.23
2009 2023 3.005684 TGCAGAATTTACAGGCAAGTTGG 59.994 43.478 4.75 0.00 0.00 3.77
2132 2146 4.848299 GCAAAGAAGCTTCTCAATAACGTG 59.152 41.667 28.58 15.99 36.28 4.49
2190 2204 7.464273 TGGCATAATTCCTGATTCATCTACAT 58.536 34.615 0.00 0.00 0.00 2.29
2221 2235 5.108026 TGGCCCCTCATACCATATATTCTT 58.892 41.667 0.00 0.00 0.00 2.52
2224 2238 6.297010 GGCCCCTCATACCATATATTCTTCAA 60.297 42.308 0.00 0.00 0.00 2.69
2225 2239 7.349598 GCCCCTCATACCATATATTCTTCAAT 58.650 38.462 0.00 0.00 0.00 2.57
2302 2318 7.504924 TTTAGTTTGAACACCACTATTCTGG 57.495 36.000 0.00 0.00 37.33 3.86
2328 2344 3.281341 TGTGAGCTTAACGGCATTTTG 57.719 42.857 0.00 0.00 34.17 2.44
2331 2347 3.853671 GTGAGCTTAACGGCATTTTGATG 59.146 43.478 0.00 0.00 34.17 3.07
2478 2494 8.749354 TGAGCTCAACTTCTGTATCTATTTACA 58.251 33.333 15.67 0.00 0.00 2.41
2506 2522 8.996271 TCGAAAAGGTTTTCTATCTTTAGGTTC 58.004 33.333 12.22 0.00 43.27 3.62
2579 2595 5.007823 CCAACTCAAATTTGCAAATGAAGCA 59.992 36.000 24.74 7.29 40.85 3.91
2657 2674 7.424227 TTCTCATTCATTTCCAACATTTTGC 57.576 32.000 0.00 0.00 0.00 3.68
2859 2876 9.333497 CCATGAAGTCATTTAATACATAATGCG 57.667 33.333 0.00 0.00 33.61 4.73
3081 3103 7.152645 GCTCGTTCCTATGATATTTTAGGTGA 58.847 38.462 10.22 7.42 37.00 4.02
3109 3131 3.368739 CCTTTTCCTGCATTGGGTTCATC 60.369 47.826 0.00 0.00 0.00 2.92
3171 3193 3.074412 AGGCCTGTATTCGACTTTTGTG 58.926 45.455 3.11 0.00 0.00 3.33
3186 3208 2.957402 TTGTGTTCCAGAAGCCTGAT 57.043 45.000 0.00 0.00 43.02 2.90
3251 3273 1.163554 GTCTGCTCTTCCTTGCCAAG 58.836 55.000 0.00 0.00 0.00 3.61
3358 3380 0.811219 CGGCAGCGGATGATTTGAGA 60.811 55.000 0.00 0.00 0.00 3.27
3361 3383 0.933097 CAGCGGATGATTTGAGACGG 59.067 55.000 0.00 0.00 0.00 4.79
3491 3515 3.185455 AGACTTGGGGTAATTCTGCTCT 58.815 45.455 0.00 0.00 28.26 4.09
3780 3818 4.612033 GCATGGCTTTTCAGAATTTTGTGC 60.612 41.667 0.00 0.00 0.00 4.57
3796 3834 3.097877 TGTGCTAGTGTGACTGTGAAG 57.902 47.619 0.00 0.00 0.00 3.02
3801 3839 3.243907 GCTAGTGTGACTGTGAAGGACTT 60.244 47.826 0.00 0.00 0.00 3.01
3802 3840 4.022242 GCTAGTGTGACTGTGAAGGACTTA 60.022 45.833 0.00 0.00 0.00 2.24
3803 3841 5.336849 GCTAGTGTGACTGTGAAGGACTTAT 60.337 44.000 0.00 0.00 0.00 1.73
3804 3842 5.140747 AGTGTGACTGTGAAGGACTTATC 57.859 43.478 0.00 0.00 0.00 1.75
3807 3845 5.992217 GTGTGACTGTGAAGGACTTATCTTT 59.008 40.000 0.00 0.00 0.00 2.52
3808 3846 6.146347 GTGTGACTGTGAAGGACTTATCTTTC 59.854 42.308 0.00 0.00 40.49 2.62
3809 3847 6.042093 TGTGACTGTGAAGGACTTATCTTTCT 59.958 38.462 1.56 0.00 40.67 2.52
3810 3848 7.232737 TGTGACTGTGAAGGACTTATCTTTCTA 59.767 37.037 1.56 0.00 40.67 2.10
3811 3849 7.542824 GTGACTGTGAAGGACTTATCTTTCTAC 59.457 40.741 1.56 0.08 40.67 2.59
3812 3850 7.451877 TGACTGTGAAGGACTTATCTTTCTACT 59.548 37.037 1.56 0.00 40.67 2.57
3813 3851 8.880991 ACTGTGAAGGACTTATCTTTCTACTA 57.119 34.615 1.56 0.00 40.67 1.82
3814 3852 8.741841 ACTGTGAAGGACTTATCTTTCTACTAC 58.258 37.037 1.56 0.00 40.67 2.73
3815 3853 8.880991 TGTGAAGGACTTATCTTTCTACTACT 57.119 34.615 1.56 0.00 40.67 2.57
3816 3854 8.958506 TGTGAAGGACTTATCTTTCTACTACTC 58.041 37.037 1.56 0.00 40.67 2.59
3817 3855 8.407832 GTGAAGGACTTATCTTTCTACTACTCC 58.592 40.741 1.56 0.00 40.67 3.85
3818 3856 7.560626 TGAAGGACTTATCTTTCTACTACTCCC 59.439 40.741 1.56 0.00 40.67 4.30
3819 3857 7.228652 AGGACTTATCTTTCTACTACTCCCT 57.771 40.000 0.00 0.00 0.00 4.20
3820 3858 7.292319 AGGACTTATCTTTCTACTACTCCCTC 58.708 42.308 0.00 0.00 0.00 4.30
3821 3859 7.129816 AGGACTTATCTTTCTACTACTCCCTCT 59.870 40.741 0.00 0.00 0.00 3.69
3822 3860 7.229907 GGACTTATCTTTCTACTACTCCCTCTG 59.770 44.444 0.00 0.00 0.00 3.35
3823 3861 7.645002 ACTTATCTTTCTACTACTCCCTCTGT 58.355 38.462 0.00 0.00 0.00 3.41
3824 3862 7.776500 ACTTATCTTTCTACTACTCCCTCTGTC 59.224 40.741 0.00 0.00 0.00 3.51
3825 3863 4.857679 TCTTTCTACTACTCCCTCTGTCC 58.142 47.826 0.00 0.00 0.00 4.02
3826 3864 3.666345 TTCTACTACTCCCTCTGTCCC 57.334 52.381 0.00 0.00 0.00 4.46
3827 3865 2.570098 TCTACTACTCCCTCTGTCCCA 58.430 52.381 0.00 0.00 0.00 4.37
3828 3866 3.132056 TCTACTACTCCCTCTGTCCCAT 58.868 50.000 0.00 0.00 0.00 4.00
3829 3867 4.313362 TCTACTACTCCCTCTGTCCCATA 58.687 47.826 0.00 0.00 0.00 2.74
3830 3868 4.730392 TCTACTACTCCCTCTGTCCCATAA 59.270 45.833 0.00 0.00 0.00 1.90
3831 3869 4.561254 ACTACTCCCTCTGTCCCATAAT 57.439 45.455 0.00 0.00 0.00 1.28
3832 3870 4.227197 ACTACTCCCTCTGTCCCATAATG 58.773 47.826 0.00 0.00 0.00 1.90
3833 3871 3.136641 ACTCCCTCTGTCCCATAATGT 57.863 47.619 0.00 0.00 0.00 2.71
3834 3872 4.280789 ACTCCCTCTGTCCCATAATGTA 57.719 45.455 0.00 0.00 0.00 2.29
3835 3873 4.631234 ACTCCCTCTGTCCCATAATGTAA 58.369 43.478 0.00 0.00 0.00 2.41
3836 3874 5.227593 ACTCCCTCTGTCCCATAATGTAAT 58.772 41.667 0.00 0.00 0.00 1.89
3837 3875 5.072329 ACTCCCTCTGTCCCATAATGTAATG 59.928 44.000 0.00 0.00 0.00 1.90
3838 3876 4.975147 TCCCTCTGTCCCATAATGTAATGT 59.025 41.667 0.00 0.00 0.00 2.71
3839 3877 5.071788 TCCCTCTGTCCCATAATGTAATGTC 59.928 44.000 0.00 0.00 0.00 3.06
3840 3878 5.163205 CCCTCTGTCCCATAATGTAATGTCA 60.163 44.000 0.00 0.00 0.00 3.58
3841 3879 6.356556 CCTCTGTCCCATAATGTAATGTCAA 58.643 40.000 0.00 0.00 0.00 3.18
3842 3880 6.828273 CCTCTGTCCCATAATGTAATGTCAAA 59.172 38.462 0.00 0.00 0.00 2.69
3843 3881 7.339212 CCTCTGTCCCATAATGTAATGTCAAAA 59.661 37.037 0.00 0.00 0.00 2.44
3844 3882 8.642935 TCTGTCCCATAATGTAATGTCAAAAA 57.357 30.769 0.00 0.00 0.00 1.94
3876 3914 5.599048 TTATGGGAATTATGGGAAGGAGG 57.401 43.478 0.00 0.00 0.00 4.30
3877 3915 2.143602 TGGGAATTATGGGAAGGAGGG 58.856 52.381 0.00 0.00 0.00 4.30
3878 3916 2.294879 TGGGAATTATGGGAAGGAGGGA 60.295 50.000 0.00 0.00 0.00 4.20
3879 3917 2.376855 GGGAATTATGGGAAGGAGGGAG 59.623 54.545 0.00 0.00 0.00 4.30
3880 3918 3.056832 GGAATTATGGGAAGGAGGGAGT 58.943 50.000 0.00 0.00 0.00 3.85
3912 3950 7.826260 ACAACTATTGGTGAAAACAGTTTTG 57.174 32.000 16.21 1.86 31.34 2.44
3934 3973 3.745332 TCAATTGACTGCAGCATAACG 57.255 42.857 15.27 0.00 0.00 3.18
3995 4034 5.197451 TGATTACACAAAGGAGGTGTTTGT 58.803 37.500 3.32 0.00 46.75 2.83
4013 4052 5.115480 GTTTGTTTCAGAGATTTTTGCCCA 58.885 37.500 0.00 0.00 0.00 5.36
4015 4054 3.243839 TGTTTCAGAGATTTTTGCCCAGC 60.244 43.478 0.00 0.00 0.00 4.85
4040 4079 5.066375 ACCTGTTTACACCGTAAAGGAAAAC 59.934 40.000 10.27 0.00 45.00 2.43
4077 4116 3.060070 GGAAACTCAACTCCGTAAACACG 60.060 47.826 0.00 0.00 0.00 4.49
4081 4120 1.682854 TCAACTCCGTAAACACGTCCT 59.317 47.619 0.00 0.00 0.00 3.85
4100 4139 1.003718 GCCGTAAACAGGTCCAGCT 60.004 57.895 0.00 0.00 0.00 4.24
4110 4149 2.906389 ACAGGTCCAGCTCAGTTATTGA 59.094 45.455 0.00 0.00 0.00 2.57
4112 4151 4.018960 ACAGGTCCAGCTCAGTTATTGATT 60.019 41.667 0.00 0.00 34.68 2.57
4121 4160 4.752101 GCTCAGTTATTGATTGATACCGCT 59.248 41.667 0.00 0.00 34.68 5.52
4146 4185 0.321346 CCCACCGGTAAAGGTTACGT 59.679 55.000 6.87 0.00 43.00 3.57
4161 4200 0.742505 TACGTTACCGAGCCCATGAG 59.257 55.000 0.00 0.00 37.88 2.90
4162 4201 1.227263 CGTTACCGAGCCCATGAGG 60.227 63.158 0.00 0.00 35.63 3.86
4247 4317 1.229400 TGCGTCCCCTACTCCCTTT 60.229 57.895 0.00 0.00 0.00 3.11
4256 4326 2.173569 CCCTACTCCCTTTGAATCCCTG 59.826 54.545 0.00 0.00 0.00 4.45
4264 4334 2.216898 CTTTGAATCCCTGCGGAGATC 58.783 52.381 5.10 0.00 43.12 2.75
4295 4365 4.324991 GCGGTGTTCGGGAAGGGT 62.325 66.667 0.00 0.00 39.69 4.34
4311 4381 3.112709 GTCGGCGGTGCTTGAGAC 61.113 66.667 7.21 0.00 0.00 3.36
4313 4383 4.680237 CGGCGGTGCTTGAGACCA 62.680 66.667 0.00 0.00 32.45 4.02
4321 4391 2.125350 CTTGAGACCAGAGGCGGC 60.125 66.667 0.00 0.00 0.00 6.53
4324 4394 3.071206 GAGACCAGAGGCGGCTGA 61.071 66.667 19.63 0.00 38.14 4.26
4325 4395 2.604686 AGACCAGAGGCGGCTGAA 60.605 61.111 19.63 0.00 38.14 3.02
4327 4397 1.743252 GACCAGAGGCGGCTGAAAG 60.743 63.158 19.63 4.64 38.14 2.62
4364 4434 0.889186 GACCGGTGGTGCACAAGATT 60.889 55.000 14.63 0.00 35.25 2.40
4435 4515 2.700773 GCCGGAGCCGCTTGATTTT 61.701 57.895 5.05 0.00 38.24 1.82
4484 4582 3.368040 CGAAGCAAGAGAGCGACG 58.632 61.111 0.00 0.00 40.15 5.12
4485 4583 1.154207 CGAAGCAAGAGAGCGACGA 60.154 57.895 0.00 0.00 39.05 4.20
4486 4584 1.131037 CGAAGCAAGAGAGCGACGAG 61.131 60.000 0.00 0.00 39.05 4.18
4487 4585 0.109504 GAAGCAAGAGAGCGACGAGT 60.110 55.000 0.00 0.00 40.15 4.18
4488 4586 1.130749 GAAGCAAGAGAGCGACGAGTA 59.869 52.381 0.00 0.00 40.15 2.59
4489 4587 1.166129 AGCAAGAGAGCGACGAGTAA 58.834 50.000 0.00 0.00 40.15 2.24
4490 4588 1.746220 AGCAAGAGAGCGACGAGTAAT 59.254 47.619 0.00 0.00 40.15 1.89
4491 4589 2.113289 GCAAGAGAGCGACGAGTAATC 58.887 52.381 0.00 0.00 0.00 1.75
4492 4590 2.478031 GCAAGAGAGCGACGAGTAATCA 60.478 50.000 0.00 0.00 0.00 2.57
4514 4612 6.542821 TCAATTCCTTTACCAGATGTGAACT 58.457 36.000 0.00 0.00 0.00 3.01
4524 4622 9.616156 TTTACCAGATGTGAACTAAACAAACTA 57.384 29.630 0.00 0.00 0.00 2.24
4525 4624 9.616156 TTACCAGATGTGAACTAAACAAACTAA 57.384 29.630 0.00 0.00 0.00 2.24
4578 4680 6.584942 GTGATCTGATTACGTTAACAGTGTCA 59.415 38.462 10.94 12.60 0.00 3.58
4602 4704 3.561143 ACCATTTCTGTAGCCAAACACA 58.439 40.909 0.00 0.00 0.00 3.72
4612 4714 1.688197 AGCCAAACACATCCAAAGTGG 59.312 47.619 0.00 0.00 41.21 4.00
4613 4715 1.270252 GCCAAACACATCCAAAGTGGG 60.270 52.381 0.00 0.00 41.21 4.61
4614 4716 2.315176 CCAAACACATCCAAAGTGGGA 58.685 47.619 0.00 0.00 41.21 4.37
4615 4717 2.697751 CCAAACACATCCAAAGTGGGAA 59.302 45.455 0.00 0.00 41.12 3.97
4616 4718 3.324556 CCAAACACATCCAAAGTGGGAAT 59.675 43.478 0.00 0.00 41.12 3.01
4617 4719 4.526262 CCAAACACATCCAAAGTGGGAATA 59.474 41.667 0.00 0.00 41.12 1.75
4618 4720 5.187576 CCAAACACATCCAAAGTGGGAATAT 59.812 40.000 0.00 0.00 41.12 1.28
4619 4721 5.920193 AACACATCCAAAGTGGGAATATG 57.080 39.130 0.00 0.00 41.12 1.78
4620 4722 5.191727 ACACATCCAAAGTGGGAATATGA 57.808 39.130 0.00 0.00 41.12 2.15
4621 4723 5.769835 ACACATCCAAAGTGGGAATATGAT 58.230 37.500 0.00 0.00 41.12 2.45
4622 4724 6.910191 ACACATCCAAAGTGGGAATATGATA 58.090 36.000 0.00 0.00 41.12 2.15
4623 4725 7.353525 ACACATCCAAAGTGGGAATATGATAA 58.646 34.615 0.00 0.00 41.12 1.75
4624 4726 8.006564 ACACATCCAAAGTGGGAATATGATAAT 58.993 33.333 0.00 0.00 41.12 1.28
4625 4727 8.301720 CACATCCAAAGTGGGAATATGATAATG 58.698 37.037 0.00 0.00 41.12 1.90
4626 4728 8.006564 ACATCCAAAGTGGGAATATGATAATGT 58.993 33.333 0.00 0.00 41.12 2.71
4627 4729 8.517878 CATCCAAAGTGGGAATATGATAATGTC 58.482 37.037 0.00 0.00 41.12 3.06
4628 4730 6.710295 TCCAAAGTGGGAATATGATAATGTCG 59.290 38.462 0.00 0.00 38.32 4.35
4629 4731 6.486657 CCAAAGTGGGAATATGATAATGTCGT 59.513 38.462 0.00 0.00 32.67 4.34
4630 4732 7.013274 CCAAAGTGGGAATATGATAATGTCGTT 59.987 37.037 0.00 0.00 32.67 3.85
4631 4733 7.496529 AAGTGGGAATATGATAATGTCGTTG 57.503 36.000 0.00 0.00 0.00 4.10
4632 4734 5.470098 AGTGGGAATATGATAATGTCGTTGC 59.530 40.000 0.00 0.00 0.00 4.17
4633 4735 4.759693 TGGGAATATGATAATGTCGTTGCC 59.240 41.667 0.00 0.00 31.81 4.52
4634 4736 4.759693 GGGAATATGATAATGTCGTTGCCA 59.240 41.667 0.00 0.00 31.63 4.92
4635 4737 5.106555 GGGAATATGATAATGTCGTTGCCAG 60.107 44.000 0.00 0.00 31.63 4.85
4636 4738 5.362556 AATATGATAATGTCGTTGCCAGC 57.637 39.130 0.00 0.00 0.00 4.85
4637 4739 2.106477 TGATAATGTCGTTGCCAGCA 57.894 45.000 0.00 0.00 0.00 4.41
4638 4740 2.642427 TGATAATGTCGTTGCCAGCAT 58.358 42.857 0.00 0.00 0.00 3.79
4639 4741 2.613595 TGATAATGTCGTTGCCAGCATC 59.386 45.455 0.00 0.00 0.00 3.91
4640 4742 2.106477 TAATGTCGTTGCCAGCATCA 57.894 45.000 0.00 0.00 0.00 3.07
4641 4743 1.466856 AATGTCGTTGCCAGCATCAT 58.533 45.000 0.00 0.00 0.00 2.45
4642 4744 0.736636 ATGTCGTTGCCAGCATCATG 59.263 50.000 0.00 0.00 0.00 3.07
4643 4745 0.606130 TGTCGTTGCCAGCATCATGT 60.606 50.000 0.00 0.00 0.00 3.21
4644 4746 1.338579 TGTCGTTGCCAGCATCATGTA 60.339 47.619 0.00 0.00 0.00 2.29
4645 4747 1.942657 GTCGTTGCCAGCATCATGTAT 59.057 47.619 0.00 0.00 0.00 2.29
4646 4748 2.032549 GTCGTTGCCAGCATCATGTATC 60.033 50.000 0.00 0.00 0.00 2.24
4647 4749 2.158914 TCGTTGCCAGCATCATGTATCT 60.159 45.455 0.00 0.00 0.00 1.98
4648 4750 3.069443 TCGTTGCCAGCATCATGTATCTA 59.931 43.478 0.00 0.00 0.00 1.98
4649 4751 3.999001 CGTTGCCAGCATCATGTATCTAT 59.001 43.478 0.00 0.00 0.00 1.98
4650 4752 4.142966 CGTTGCCAGCATCATGTATCTATG 60.143 45.833 0.00 0.00 0.00 2.23
4651 4753 4.895668 TGCCAGCATCATGTATCTATGA 57.104 40.909 0.00 0.00 41.00 2.15
4652 4754 5.431179 TGCCAGCATCATGTATCTATGAT 57.569 39.130 0.00 0.00 46.02 2.45
4653 4755 5.812286 TGCCAGCATCATGTATCTATGATT 58.188 37.500 0.00 0.00 43.41 2.57
4654 4756 6.243148 TGCCAGCATCATGTATCTATGATTT 58.757 36.000 0.00 0.00 43.41 2.17
4655 4757 7.396418 TGCCAGCATCATGTATCTATGATTTA 58.604 34.615 0.00 0.00 43.41 1.40
4656 4758 8.050930 TGCCAGCATCATGTATCTATGATTTAT 58.949 33.333 0.00 0.00 43.41 1.40
4657 4759 8.343366 GCCAGCATCATGTATCTATGATTTATG 58.657 37.037 0.00 0.00 43.41 1.90
4658 4760 9.609346 CCAGCATCATGTATCTATGATTTATGA 57.391 33.333 0.00 0.00 43.41 2.15
4702 4804 9.807649 ATTATCTGTTTTGGATGTTTAATGAGC 57.192 29.630 0.00 0.00 0.00 4.26
4703 4805 6.899393 TCTGTTTTGGATGTTTAATGAGCT 57.101 33.333 0.00 0.00 0.00 4.09
4704 4806 7.288810 TCTGTTTTGGATGTTTAATGAGCTT 57.711 32.000 0.00 0.00 0.00 3.74
4705 4807 7.725251 TCTGTTTTGGATGTTTAATGAGCTTT 58.275 30.769 0.00 0.00 0.00 3.51
4706 4808 8.855110 TCTGTTTTGGATGTTTAATGAGCTTTA 58.145 29.630 0.00 0.00 0.00 1.85
4707 4809 9.643693 CTGTTTTGGATGTTTAATGAGCTTTAT 57.356 29.630 0.00 0.00 0.00 1.40
4708 4810 9.995003 TGTTTTGGATGTTTAATGAGCTTTATT 57.005 25.926 0.00 0.00 0.00 1.40
4747 4849 8.756486 TTATTTTTGGGACTAGCCTATTAACC 57.244 34.615 0.00 0.00 36.66 2.85
4748 4850 4.411256 TTTGGGACTAGCCTATTAACCG 57.589 45.455 0.00 0.00 36.66 4.44
4749 4851 2.322658 TGGGACTAGCCTATTAACCGG 58.677 52.381 0.00 0.00 36.66 5.28
4750 4852 2.091166 TGGGACTAGCCTATTAACCGGA 60.091 50.000 9.46 0.00 36.66 5.14
4751 4853 2.561858 GGGACTAGCCTATTAACCGGAG 59.438 54.545 9.46 0.00 36.66 4.63
4752 4854 4.629903 GGGACTAGCCTATTAACCGGAGG 61.630 56.522 9.46 4.78 46.99 4.30
4764 4866 3.793060 CGGAGGTCCAGTCCAAGT 58.207 61.111 0.00 0.00 33.14 3.16
4765 4867 2.058675 CGGAGGTCCAGTCCAAGTT 58.941 57.895 0.00 0.00 33.14 2.66
4766 4868 0.320771 CGGAGGTCCAGTCCAAGTTG 60.321 60.000 0.00 0.00 33.14 3.16
4767 4869 0.765510 GGAGGTCCAGTCCAAGTTGT 59.234 55.000 1.45 0.00 33.84 3.32
4768 4870 1.143073 GGAGGTCCAGTCCAAGTTGTT 59.857 52.381 1.45 0.00 33.84 2.83
4769 4871 2.222027 GAGGTCCAGTCCAAGTTGTTG 58.778 52.381 1.45 0.00 0.00 3.33
4770 4872 1.564348 AGGTCCAGTCCAAGTTGTTGT 59.436 47.619 1.45 0.00 30.95 3.32
4771 4873 2.025321 AGGTCCAGTCCAAGTTGTTGTT 60.025 45.455 1.45 0.00 30.95 2.83
4772 4874 2.758423 GGTCCAGTCCAAGTTGTTGTTT 59.242 45.455 1.45 0.00 30.95 2.83
4773 4875 3.194755 GGTCCAGTCCAAGTTGTTGTTTT 59.805 43.478 1.45 0.00 30.95 2.43
4774 4876 4.322424 GGTCCAGTCCAAGTTGTTGTTTTT 60.322 41.667 1.45 0.00 30.95 1.94
4795 4897 6.757026 TTTTTGCCTATTTTAGTGTTTCGC 57.243 33.333 0.00 0.00 0.00 4.70
4796 4898 5.440234 TTTGCCTATTTTAGTGTTTCGCA 57.560 34.783 0.00 0.00 0.00 5.10
4797 4899 4.678509 TGCCTATTTTAGTGTTTCGCAG 57.321 40.909 0.00 0.00 0.00 5.18
4798 4900 4.320023 TGCCTATTTTAGTGTTTCGCAGA 58.680 39.130 0.00 0.00 0.00 4.26
4799 4901 4.757657 TGCCTATTTTAGTGTTTCGCAGAA 59.242 37.500 0.00 0.00 45.90 3.02
4800 4902 5.239744 TGCCTATTTTAGTGTTTCGCAGAAA 59.760 36.000 0.55 0.55 45.90 2.52
4801 4903 6.146898 GCCTATTTTAGTGTTTCGCAGAAAA 58.853 36.000 5.51 0.00 45.90 2.29
4802 4904 6.639279 GCCTATTTTAGTGTTTCGCAGAAAAA 59.361 34.615 5.51 0.00 45.90 1.94
4803 4905 7.148967 GCCTATTTTAGTGTTTCGCAGAAAAAG 60.149 37.037 5.51 0.00 45.90 2.27
4804 4906 8.073768 CCTATTTTAGTGTTTCGCAGAAAAAGA 58.926 33.333 5.51 0.00 45.90 2.52
4805 4907 9.612620 CTATTTTAGTGTTTCGCAGAAAAAGAT 57.387 29.630 5.51 1.96 45.90 2.40
4806 4908 8.871686 ATTTTAGTGTTTCGCAGAAAAAGATT 57.128 26.923 5.51 0.00 45.90 2.40
4807 4909 9.959749 ATTTTAGTGTTTCGCAGAAAAAGATTA 57.040 25.926 5.51 0.00 45.90 1.75
4808 4910 9.959749 TTTTAGTGTTTCGCAGAAAAAGATTAT 57.040 25.926 5.51 0.00 45.90 1.28
4809 4911 9.607285 TTTAGTGTTTCGCAGAAAAAGATTATC 57.393 29.630 5.51 0.00 45.90 1.75
4810 4912 7.202016 AGTGTTTCGCAGAAAAAGATTATCA 57.798 32.000 5.51 0.00 45.90 2.15
4811 4913 7.648142 AGTGTTTCGCAGAAAAAGATTATCAA 58.352 30.769 5.51 0.00 45.90 2.57
4812 4914 8.134895 AGTGTTTCGCAGAAAAAGATTATCAAA 58.865 29.630 5.51 0.00 45.90 2.69
4813 4915 8.207906 GTGTTTCGCAGAAAAAGATTATCAAAC 58.792 33.333 5.51 0.00 45.90 2.93
4814 4916 7.112844 TGTTTCGCAGAAAAAGATTATCAAACG 59.887 33.333 5.51 0.00 45.90 3.60
4815 4917 5.627172 TCGCAGAAAAAGATTATCAAACGG 58.373 37.500 0.00 0.00 0.00 4.44
4816 4918 5.410132 TCGCAGAAAAAGATTATCAAACGGA 59.590 36.000 0.00 0.00 0.00 4.69
4817 4919 5.734498 CGCAGAAAAAGATTATCAAACGGAG 59.266 40.000 0.00 0.00 0.00 4.63
4819 4921 6.743172 GCAGAAAAAGATTATCAAACGGAGTC 59.257 38.462 0.00 0.00 45.00 3.36
4820 4922 7.244192 CAGAAAAAGATTATCAAACGGAGTCC 58.756 38.462 0.00 0.00 45.00 3.85
4821 4923 6.940298 AGAAAAAGATTATCAAACGGAGTCCA 59.060 34.615 10.49 0.00 45.00 4.02
4822 4924 7.447238 AGAAAAAGATTATCAAACGGAGTCCAA 59.553 33.333 10.49 0.00 45.00 3.53
4823 4925 7.519032 AAAAGATTATCAAACGGAGTCCAAA 57.481 32.000 10.49 0.00 45.00 3.28
4824 4926 6.496338 AAGATTATCAAACGGAGTCCAAAC 57.504 37.500 10.49 0.00 45.00 2.93
4825 4927 4.630069 AGATTATCAAACGGAGTCCAAACG 59.370 41.667 10.49 0.00 45.00 3.60
4826 4928 1.519408 ATCAAACGGAGTCCAAACGG 58.481 50.000 10.49 0.00 45.00 4.44
4827 4929 0.464870 TCAAACGGAGTCCAAACGGA 59.535 50.000 10.49 0.00 45.00 4.69
4828 4930 1.134461 TCAAACGGAGTCCAAACGGAA 60.134 47.619 10.49 0.00 45.00 4.30
4829 4931 1.877443 CAAACGGAGTCCAAACGGAAT 59.123 47.619 10.49 0.00 45.00 3.01
4830 4932 1.519408 AACGGAGTCCAAACGGAATG 58.481 50.000 10.49 0.00 45.00 2.67
4831 4933 0.682852 ACGGAGTCCAAACGGAATGA 59.317 50.000 10.49 0.00 29.74 2.57
4832 4934 1.071071 ACGGAGTCCAAACGGAATGAA 59.929 47.619 10.49 0.00 29.74 2.57
4833 4935 2.147958 CGGAGTCCAAACGGAATGAAA 58.852 47.619 10.49 0.00 33.16 2.69
4834 4936 2.095919 CGGAGTCCAAACGGAATGAAAC 60.096 50.000 10.49 0.00 33.16 2.78
4835 4937 2.228103 GGAGTCCAAACGGAATGAAACC 59.772 50.000 3.60 0.00 33.16 3.27
4836 4938 3.146847 GAGTCCAAACGGAATGAAACCT 58.853 45.455 0.00 0.00 33.16 3.50
4837 4939 3.562182 AGTCCAAACGGAATGAAACCTT 58.438 40.909 0.00 0.00 33.16 3.50
4838 4940 3.568430 AGTCCAAACGGAATGAAACCTTC 59.432 43.478 0.00 0.00 33.16 3.46
4839 4941 2.550606 TCCAAACGGAATGAAACCTTCG 59.449 45.455 0.00 0.00 0.00 3.79
4840 4942 2.351350 CCAAACGGAATGAAACCTTCGG 60.351 50.000 0.00 0.00 0.00 4.30
4841 4943 1.530323 AACGGAATGAAACCTTCGGG 58.470 50.000 0.00 0.00 41.87 5.14
4842 4944 0.688487 ACGGAATGAAACCTTCGGGA 59.312 50.000 0.00 0.00 38.77 5.14
4843 4945 1.338769 ACGGAATGAAACCTTCGGGAG 60.339 52.381 0.00 0.00 38.77 4.30
4844 4946 1.066430 CGGAATGAAACCTTCGGGAGA 60.066 52.381 0.00 0.00 38.77 3.71
4845 4947 2.633488 GGAATGAAACCTTCGGGAGAG 58.367 52.381 0.00 0.00 41.75 3.20
4846 4948 2.027100 GGAATGAAACCTTCGGGAGAGT 60.027 50.000 0.00 0.00 41.75 3.24
4847 4949 3.559384 GGAATGAAACCTTCGGGAGAGTT 60.559 47.826 0.00 0.00 41.75 3.01
4848 4950 4.323257 GGAATGAAACCTTCGGGAGAGTTA 60.323 45.833 0.00 0.00 41.75 2.24
4849 4951 5.429130 GAATGAAACCTTCGGGAGAGTTAT 58.571 41.667 0.00 0.00 41.75 1.89
4850 4952 4.903045 TGAAACCTTCGGGAGAGTTATT 57.097 40.909 0.00 0.00 41.75 1.40
4851 4953 5.237236 TGAAACCTTCGGGAGAGTTATTT 57.763 39.130 0.00 0.00 41.75 1.40
4852 4954 5.627135 TGAAACCTTCGGGAGAGTTATTTT 58.373 37.500 0.00 0.00 41.75 1.82
4853 4955 6.066032 TGAAACCTTCGGGAGAGTTATTTTT 58.934 36.000 0.00 0.00 41.75 1.94
4854 4956 5.959618 AACCTTCGGGAGAGTTATTTTTG 57.040 39.130 0.00 0.00 41.75 2.44
4855 4957 4.332828 ACCTTCGGGAGAGTTATTTTTGG 58.667 43.478 0.00 0.00 41.75 3.28
4856 4958 4.042435 ACCTTCGGGAGAGTTATTTTTGGA 59.958 41.667 0.00 0.00 41.75 3.53
4857 4959 5.007682 CCTTCGGGAGAGTTATTTTTGGAA 58.992 41.667 0.00 0.00 41.75 3.53
4858 4960 5.106277 CCTTCGGGAGAGTTATTTTTGGAAC 60.106 44.000 0.00 0.00 41.75 3.62
4859 4961 4.975631 TCGGGAGAGTTATTTTTGGAACA 58.024 39.130 0.00 0.00 0.00 3.18
4860 4962 5.828859 TTCGGGAGAGTTATTTTTGGAACAA 59.171 36.000 0.00 0.00 42.84 2.83
4861 4963 6.321690 TTCGGGAGAGTTATTTTTGGAACAAA 59.678 34.615 0.00 0.00 42.84 2.83
4862 4964 7.682501 TTCGGGAGAGTTATTTTTGGAACAAAC 60.683 37.037 0.00 0.00 42.84 2.93
4872 4974 0.958091 TGGAACAAACGCAATCCAGG 59.042 50.000 0.00 0.00 37.05 4.45
4873 4975 1.243902 GGAACAAACGCAATCCAGGA 58.756 50.000 0.00 0.00 32.08 3.86
4874 4976 1.818674 GGAACAAACGCAATCCAGGAT 59.181 47.619 0.00 0.00 32.08 3.24
4875 4977 3.013921 GGAACAAACGCAATCCAGGATA 58.986 45.455 1.02 0.00 32.08 2.59
4876 4978 3.181500 GGAACAAACGCAATCCAGGATAC 60.181 47.826 1.02 0.00 32.08 2.24
4877 4979 7.782390 TGGAACAAACGCAATCCAGGATACT 62.782 44.000 1.02 0.00 44.35 2.12
4893 4995 5.461032 GGATACTTGGAGTAGACATCAGG 57.539 47.826 0.00 0.00 33.66 3.86
4894 4996 4.282195 GGATACTTGGAGTAGACATCAGGG 59.718 50.000 0.00 0.00 33.66 4.45
4895 4997 3.474798 ACTTGGAGTAGACATCAGGGA 57.525 47.619 0.00 0.00 0.00 4.20
4896 4998 3.791320 ACTTGGAGTAGACATCAGGGAA 58.209 45.455 0.00 0.00 0.00 3.97
4897 4999 3.772025 ACTTGGAGTAGACATCAGGGAAG 59.228 47.826 0.00 0.00 0.00 3.46
4898 5000 2.111384 TGGAGTAGACATCAGGGAAGC 58.889 52.381 0.00 0.00 0.00 3.86
4899 5001 2.111384 GGAGTAGACATCAGGGAAGCA 58.889 52.381 0.00 0.00 0.00 3.91
4900 5002 2.501723 GGAGTAGACATCAGGGAAGCAA 59.498 50.000 0.00 0.00 0.00 3.91
4901 5003 3.526534 GAGTAGACATCAGGGAAGCAAC 58.473 50.000 0.00 0.00 0.00 4.17
4902 5004 2.093973 AGTAGACATCAGGGAAGCAACG 60.094 50.000 0.00 0.00 0.00 4.10
4903 5005 0.976641 AGACATCAGGGAAGCAACGA 59.023 50.000 0.00 0.00 0.00 3.85
4904 5006 1.066573 AGACATCAGGGAAGCAACGAG 60.067 52.381 0.00 0.00 0.00 4.18
4905 5007 0.036010 ACATCAGGGAAGCAACGAGG 60.036 55.000 0.00 0.00 0.00 4.63
4906 5008 0.036010 CATCAGGGAAGCAACGAGGT 60.036 55.000 0.00 0.00 0.00 3.85
4907 5009 0.036010 ATCAGGGAAGCAACGAGGTG 60.036 55.000 0.00 0.00 0.00 4.00
4908 5010 1.672356 CAGGGAAGCAACGAGGTGG 60.672 63.158 0.00 0.00 0.00 4.61
4909 5011 3.056328 GGGAAGCAACGAGGTGGC 61.056 66.667 0.00 0.00 31.62 5.01
4910 5012 3.056328 GGAAGCAACGAGGTGGCC 61.056 66.667 0.00 0.00 31.88 5.36
4911 5013 3.423154 GAAGCAACGAGGTGGCCG 61.423 66.667 0.00 0.00 31.88 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
192 200 0.037605 ACGGCTAGGGTTTTCTCACG 60.038 55.000 0.00 0.00 0.00 4.35
217 225 0.465705 GCAGACTCATCCCCAATCGA 59.534 55.000 0.00 0.00 0.00 3.59
237 245 1.180029 CAGATGGCTTTCCCTGGTTG 58.820 55.000 0.00 0.00 0.00 3.77
310 318 0.034896 AAAGATCTCGTTGCCACCGT 59.965 50.000 0.00 0.00 0.00 4.83
359 367 1.588932 CTGTGTGTGTGACGCGTCT 60.589 57.895 36.27 4.51 37.96 4.18
468 478 4.452455 GGCGCTGTAGCAATGAATAGTTAT 59.548 41.667 7.64 0.00 42.21 1.89
614 625 1.087501 GGAACGAGGCAAGTCAATCC 58.912 55.000 0.00 0.00 0.00 3.01
615 626 2.100605 AGGAACGAGGCAAGTCAATC 57.899 50.000 0.00 0.00 0.00 2.67
616 627 2.973945 GTAGGAACGAGGCAAGTCAAT 58.026 47.619 0.00 0.00 0.00 2.57
617 628 2.450609 GTAGGAACGAGGCAAGTCAA 57.549 50.000 0.00 0.00 0.00 3.18
629 640 2.095372 AGCTTATTTTGCGCGTAGGAAC 59.905 45.455 8.43 0.00 35.28 3.62
630 641 2.352388 AGCTTATTTTGCGCGTAGGAA 58.648 42.857 8.43 2.45 35.28 3.36
631 642 2.018542 AGCTTATTTTGCGCGTAGGA 57.981 45.000 8.43 0.00 35.28 2.94
632 643 2.825086 AAGCTTATTTTGCGCGTAGG 57.175 45.000 8.43 0.00 35.28 3.18
633 644 2.845967 CCAAAGCTTATTTTGCGCGTAG 59.154 45.455 8.43 0.00 36.86 3.51
634 645 2.414824 CCCAAAGCTTATTTTGCGCGTA 60.415 45.455 8.43 0.00 36.86 4.42
635 646 1.668628 CCCAAAGCTTATTTTGCGCGT 60.669 47.619 8.43 0.00 36.86 6.01
636 647 0.991344 CCCAAAGCTTATTTTGCGCG 59.009 50.000 0.00 0.00 36.86 6.86
637 648 1.726248 CACCCAAAGCTTATTTTGCGC 59.274 47.619 0.00 0.00 36.86 6.09
638 649 2.029470 TCCACCCAAAGCTTATTTTGCG 60.029 45.455 0.00 0.00 36.86 4.85
639 650 3.676291 TCCACCCAAAGCTTATTTTGC 57.324 42.857 0.00 0.00 36.86 3.68
640 651 4.931002 CACATCCACCCAAAGCTTATTTTG 59.069 41.667 0.00 0.00 37.70 2.44
641 652 4.563374 GCACATCCACCCAAAGCTTATTTT 60.563 41.667 0.00 0.00 0.00 1.82
642 653 3.055891 GCACATCCACCCAAAGCTTATTT 60.056 43.478 0.00 0.00 0.00 1.40
643 654 2.497273 GCACATCCACCCAAAGCTTATT 59.503 45.455 0.00 0.00 0.00 1.40
644 655 2.102578 GCACATCCACCCAAAGCTTAT 58.897 47.619 0.00 0.00 0.00 1.73
645 656 1.202989 TGCACATCCACCCAAAGCTTA 60.203 47.619 0.00 0.00 0.00 3.09
646 657 0.469705 TGCACATCCACCCAAAGCTT 60.470 50.000 0.00 0.00 0.00 3.74
647 658 0.896940 CTGCACATCCACCCAAAGCT 60.897 55.000 0.00 0.00 0.00 3.74
648 659 1.181098 ACTGCACATCCACCCAAAGC 61.181 55.000 0.00 0.00 0.00 3.51
649 660 1.331214 AACTGCACATCCACCCAAAG 58.669 50.000 0.00 0.00 0.00 2.77
650 661 1.686052 GAAACTGCACATCCACCCAAA 59.314 47.619 0.00 0.00 0.00 3.28
651 662 1.327303 GAAACTGCACATCCACCCAA 58.673 50.000 0.00 0.00 0.00 4.12
652 663 0.184692 TGAAACTGCACATCCACCCA 59.815 50.000 0.00 0.00 0.00 4.51
653 664 1.474077 GATGAAACTGCACATCCACCC 59.526 52.381 4.13 0.00 37.50 4.61
654 665 2.161855 TGATGAAACTGCACATCCACC 58.838 47.619 11.32 0.00 41.21 4.61
655 666 3.921119 TTGATGAAACTGCACATCCAC 57.079 42.857 11.32 0.00 41.21 4.02
656 667 4.933505 TTTTGATGAAACTGCACATCCA 57.066 36.364 11.32 0.00 41.21 3.41
657 668 5.049167 TGTTTTTGATGAAACTGCACATCC 58.951 37.500 11.32 0.00 41.21 3.51
658 669 5.519566 TGTGTTTTTGATGAAACTGCACATC 59.480 36.000 7.83 7.83 41.94 3.06
659 670 5.417811 TGTGTTTTTGATGAAACTGCACAT 58.582 33.333 4.76 0.00 39.62 3.21
660 671 4.814147 TGTGTTTTTGATGAAACTGCACA 58.186 34.783 4.76 4.76 39.62 4.57
661 672 4.268405 CCTGTGTTTTTGATGAAACTGCAC 59.732 41.667 2.68 0.00 39.62 4.57
662 673 4.159321 TCCTGTGTTTTTGATGAAACTGCA 59.841 37.500 2.68 0.00 39.62 4.41
663 674 4.681744 TCCTGTGTTTTTGATGAAACTGC 58.318 39.130 2.68 0.00 39.62 4.40
664 675 6.254157 CACTTCCTGTGTTTTTGATGAAACTG 59.746 38.462 2.68 0.00 41.53 3.16
665 676 6.152661 TCACTTCCTGTGTTTTTGATGAAACT 59.847 34.615 2.68 0.00 46.27 2.66
666 677 6.329496 TCACTTCCTGTGTTTTTGATGAAAC 58.671 36.000 0.00 0.00 46.27 2.78
667 678 6.152661 ACTCACTTCCTGTGTTTTTGATGAAA 59.847 34.615 0.00 0.00 46.27 2.69
668 679 5.652014 ACTCACTTCCTGTGTTTTTGATGAA 59.348 36.000 0.00 0.00 46.27 2.57
669 680 5.192927 ACTCACTTCCTGTGTTTTTGATGA 58.807 37.500 0.00 0.00 46.27 2.92
670 681 5.505173 ACTCACTTCCTGTGTTTTTGATG 57.495 39.130 0.00 0.00 46.27 3.07
671 682 6.357367 ACTACTCACTTCCTGTGTTTTTGAT 58.643 36.000 0.00 0.00 46.27 2.57
672 683 5.741011 ACTACTCACTTCCTGTGTTTTTGA 58.259 37.500 0.00 0.00 46.27 2.69
673 684 6.436843 AACTACTCACTTCCTGTGTTTTTG 57.563 37.500 0.00 0.00 46.27 2.44
674 685 7.393515 AGAAAACTACTCACTTCCTGTGTTTTT 59.606 33.333 0.00 0.00 46.27 1.94
675 686 6.884836 AGAAAACTACTCACTTCCTGTGTTTT 59.115 34.615 0.00 0.00 46.27 2.43
676 687 6.415573 AGAAAACTACTCACTTCCTGTGTTT 58.584 36.000 0.00 0.00 46.27 2.83
677 688 5.990668 AGAAAACTACTCACTTCCTGTGTT 58.009 37.500 0.00 0.00 46.27 3.32
678 689 5.615925 AGAAAACTACTCACTTCCTGTGT 57.384 39.130 0.00 0.00 46.27 3.72
679 690 6.144080 CGTAAGAAAACTACTCACTTCCTGTG 59.856 42.308 0.00 0.00 44.46 3.66
680 691 6.214399 CGTAAGAAAACTACTCACTTCCTGT 58.786 40.000 0.00 0.00 43.02 4.00
681 692 6.692232 CGTAAGAAAACTACTCACTTCCTG 57.308 41.667 0.00 0.00 43.02 3.86
708 719 9.491675 TCGGTTTGTAGAAAATGTATACAGAAA 57.508 29.630 11.91 0.00 31.50 2.52
709 720 9.491675 TTCGGTTTGTAGAAAATGTATACAGAA 57.508 29.630 11.91 1.55 31.50 3.02
710 721 9.661563 ATTCGGTTTGTAGAAAATGTATACAGA 57.338 29.630 11.91 0.00 31.50 3.41
711 722 9.702726 CATTCGGTTTGTAGAAAATGTATACAG 57.297 33.333 11.91 0.00 31.50 2.74
712 723 8.178964 GCATTCGGTTTGTAGAAAATGTATACA 58.821 33.333 8.27 8.27 0.00 2.29
713 724 8.178964 TGCATTCGGTTTGTAGAAAATGTATAC 58.821 33.333 0.00 0.00 0.00 1.47
714 725 8.270080 TGCATTCGGTTTGTAGAAAATGTATA 57.730 30.769 0.00 0.00 0.00 1.47
715 726 7.151999 TGCATTCGGTTTGTAGAAAATGTAT 57.848 32.000 0.00 0.00 0.00 2.29
716 727 6.561737 TGCATTCGGTTTGTAGAAAATGTA 57.438 33.333 0.00 0.00 0.00 2.29
717 728 5.446143 TGCATTCGGTTTGTAGAAAATGT 57.554 34.783 0.00 0.00 0.00 2.71
718 729 9.897744 ATATATGCATTCGGTTTGTAGAAAATG 57.102 29.630 3.54 0.00 0.00 2.32
721 732 9.990360 TCTATATATGCATTCGGTTTGTAGAAA 57.010 29.630 3.54 0.00 0.00 2.52
722 733 9.990360 TTCTATATATGCATTCGGTTTGTAGAA 57.010 29.630 3.54 5.84 0.00 2.10
723 734 9.990360 TTTCTATATATGCATTCGGTTTGTAGA 57.010 29.630 3.54 0.00 0.00 2.59
781 792 1.816074 CGGAGGATTTTCGTGGGAAA 58.184 50.000 0.00 0.00 40.29 3.13
782 793 0.675522 GCGGAGGATTTTCGTGGGAA 60.676 55.000 0.00 0.00 0.00 3.97
783 794 1.078708 GCGGAGGATTTTCGTGGGA 60.079 57.895 0.00 0.00 0.00 4.37
784 795 1.376683 TGCGGAGGATTTTCGTGGG 60.377 57.895 0.00 0.00 0.00 4.61
785 796 1.644786 GGTGCGGAGGATTTTCGTGG 61.645 60.000 0.00 0.00 0.00 4.94
786 797 1.794222 GGTGCGGAGGATTTTCGTG 59.206 57.895 0.00 0.00 0.00 4.35
787 798 1.740296 CGGTGCGGAGGATTTTCGT 60.740 57.895 0.00 0.00 0.00 3.85
788 799 1.017177 TTCGGTGCGGAGGATTTTCG 61.017 55.000 0.00 0.00 0.00 3.46
789 800 0.446616 GTTCGGTGCGGAGGATTTTC 59.553 55.000 0.00 0.00 0.00 2.29
790 801 1.296056 CGTTCGGTGCGGAGGATTTT 61.296 55.000 0.00 0.00 0.00 1.82
791 802 1.740296 CGTTCGGTGCGGAGGATTT 60.740 57.895 0.00 0.00 0.00 2.17
792 803 2.125673 CGTTCGGTGCGGAGGATT 60.126 61.111 0.00 0.00 0.00 3.01
793 804 3.064987 CTCGTTCGGTGCGGAGGAT 62.065 63.158 0.00 0.00 28.88 3.24
794 805 3.744719 CTCGTTCGGTGCGGAGGA 61.745 66.667 0.00 0.00 0.00 3.71
795 806 4.796231 CCTCGTTCGGTGCGGAGG 62.796 72.222 0.00 0.00 0.00 4.30
800 811 3.876589 TTGAGGCCTCGTTCGGTGC 62.877 63.158 27.43 1.45 0.00 5.01
801 812 0.882927 TTTTGAGGCCTCGTTCGGTG 60.883 55.000 27.43 0.00 0.00 4.94
802 813 0.883370 GTTTTGAGGCCTCGTTCGGT 60.883 55.000 27.43 0.00 0.00 4.69
803 814 0.602905 AGTTTTGAGGCCTCGTTCGG 60.603 55.000 27.43 0.00 0.00 4.30
804 815 0.512952 CAGTTTTGAGGCCTCGTTCG 59.487 55.000 27.43 10.03 0.00 3.95
805 816 1.531578 GACAGTTTTGAGGCCTCGTTC 59.468 52.381 27.43 16.79 0.00 3.95
806 817 1.134220 TGACAGTTTTGAGGCCTCGTT 60.134 47.619 27.43 8.27 0.00 3.85
807 818 0.468226 TGACAGTTTTGAGGCCTCGT 59.532 50.000 27.43 17.65 0.00 4.18
808 819 0.868406 GTGACAGTTTTGAGGCCTCG 59.132 55.000 27.43 14.43 0.00 4.63
809 820 0.868406 CGTGACAGTTTTGAGGCCTC 59.132 55.000 26.78 26.78 0.00 4.70
810 821 1.166531 GCGTGACAGTTTTGAGGCCT 61.167 55.000 3.86 3.86 0.00 5.19
811 822 1.282875 GCGTGACAGTTTTGAGGCC 59.717 57.895 0.00 0.00 0.00 5.19
812 823 1.082756 CGCGTGACAGTTTTGAGGC 60.083 57.895 0.00 0.00 0.00 4.70
813 824 0.508641 CTCGCGTGACAGTTTTGAGG 59.491 55.000 5.77 0.00 0.00 3.86
821 832 2.580867 GCTAGCCTCGCGTGACAG 60.581 66.667 10.21 4.69 0.00 3.51
869 880 2.281484 GGGAGTTGTTGAGCCGCA 60.281 61.111 0.00 0.00 0.00 5.69
954 965 0.097150 TGAAGACGACGCTCTCGATG 59.903 55.000 7.58 0.00 46.14 3.84
1072 1083 1.183549 GAGAAGAAGCCGTGTAGGGA 58.816 55.000 0.00 0.00 41.48 4.20
1167 1180 2.595095 GGATGCGATGGGGTTGGA 59.405 61.111 0.00 0.00 0.00 3.53
1181 1194 3.474570 GGTCGAGGCAGCAGGGAT 61.475 66.667 0.00 0.00 0.00 3.85
1213 1226 6.374333 TGCTCATACCTTAGAAACCAATCAAC 59.626 38.462 0.00 0.00 0.00 3.18
1214 1227 6.374333 GTGCTCATACCTTAGAAACCAATCAA 59.626 38.462 0.00 0.00 0.00 2.57
1321 1334 0.250989 GACGATGGTTGGGGGTTCAA 60.251 55.000 0.00 0.00 0.00 2.69
1326 1339 1.143183 CGTAGACGATGGTTGGGGG 59.857 63.158 0.00 0.00 43.02 5.40
1387 1400 1.019673 CATACAGCAGGTGATGTGGC 58.980 55.000 11.07 0.00 45.12 5.01
1402 1415 1.333258 GCAGCCTTCGCGAATTCATAC 60.333 52.381 23.67 7.06 41.18 2.39
1414 1427 2.105006 TCTTGATGAGTGCAGCCTTC 57.895 50.000 0.00 0.00 0.00 3.46
1480 1493 3.386726 ACCAGAACGAATTGGATATCGGA 59.613 43.478 10.04 0.00 43.11 4.55
1499 1512 1.343142 TGCTCAGTTCTTCGCTAACCA 59.657 47.619 0.00 0.00 0.00 3.67
1555 1568 2.151202 TCGCAGACCTTCAACATTTCC 58.849 47.619 0.00 0.00 0.00 3.13
1652 1665 2.950309 GGCTCAGGTTATAGTGAGTCGA 59.050 50.000 9.39 0.00 41.99 4.20
1701 1714 8.814038 AGTTCACTATAGGCAAAAGATTTCAT 57.186 30.769 4.43 0.00 0.00 2.57
1705 1718 8.680903 CAATGAGTTCACTATAGGCAAAAGATT 58.319 33.333 4.43 0.00 0.00 2.40
1727 1740 3.575858 CGTCTATCACGGAAAGCAATG 57.424 47.619 0.00 0.00 45.46 2.82
1758 1772 0.109226 GGTCGTCACTACTGACAGCC 60.109 60.000 1.25 1.45 46.47 4.85
1839 1853 0.676736 GGGGAGAGGAGATTACAGCG 59.323 60.000 0.00 0.00 0.00 5.18
1853 1867 0.253207 AGTAAGAAGGGGTGGGGGAG 60.253 60.000 0.00 0.00 0.00 4.30
1855 1869 0.331616 CAAGTAAGAAGGGGTGGGGG 59.668 60.000 0.00 0.00 0.00 5.40
1884 1898 5.420725 TGCCATCAGCTCTTAAGACTTTA 57.579 39.130 0.00 0.00 44.23 1.85
1885 1899 4.292186 TGCCATCAGCTCTTAAGACTTT 57.708 40.909 0.00 0.00 44.23 2.66
1920 1934 5.426504 AGCTTCAAAGTCATCCTGTCATAG 58.573 41.667 0.00 0.00 0.00 2.23
1924 1938 3.668447 TGAGCTTCAAAGTCATCCTGTC 58.332 45.455 0.00 0.00 0.00 3.51
2132 2146 3.084039 TCCAGGTTTGAGCAATGATGAC 58.916 45.455 0.00 0.00 0.00 3.06
2302 2318 2.742053 TGCCGTTAAGCTCACAAAGATC 59.258 45.455 0.00 0.00 0.00 2.75
2500 2516 6.040729 CCATTTGGATGTAATGCATGAACCTA 59.959 38.462 0.00 0.00 46.71 3.08
2506 2522 3.805422 GCACCATTTGGATGTAATGCATG 59.195 43.478 0.00 0.00 46.71 4.06
2579 2595 4.460382 ACGAGGCAATGATTCTCAAACATT 59.540 37.500 0.00 0.00 35.10 2.71
2600 2616 2.178912 TAAGGCTGGGAAAGTGAACG 57.821 50.000 0.00 0.00 0.00 3.95
2603 2619 2.239654 CCTCATAAGGCTGGGAAAGTGA 59.760 50.000 0.00 0.00 35.37 3.41
2655 2672 2.299013 ACATGAACGGAAGACTACAGCA 59.701 45.455 0.00 0.00 0.00 4.41
2656 2673 2.960819 ACATGAACGGAAGACTACAGC 58.039 47.619 0.00 0.00 0.00 4.40
2657 2674 5.347907 GGTTTACATGAACGGAAGACTACAG 59.652 44.000 0.00 0.00 0.00 2.74
2832 2849 9.630098 GCATTATGTATTAAATGACTTCATGGG 57.370 33.333 0.00 0.00 36.56 4.00
2940 2962 9.690913 ATAAACCATCAGATATATCCACCATTG 57.309 33.333 9.18 0.48 0.00 2.82
3081 3103 3.099141 CCAATGCAGGAAAAGGGTACAT 58.901 45.455 0.00 0.00 0.00 2.29
3109 3131 5.276270 CACTGAGCGAATTGGAATATTTGG 58.724 41.667 0.00 0.00 0.00 3.28
3171 3193 1.556911 TCTGGATCAGGCTTCTGGAAC 59.443 52.381 0.00 0.00 38.96 3.62
3186 3208 1.915489 ACAGGTGGTATTGCATCTGGA 59.085 47.619 0.00 0.00 0.00 3.86
3251 3273 6.438763 ACAGTAAACAAAAATCTAGTGCTGC 58.561 36.000 0.00 0.00 0.00 5.25
3320 3342 3.400928 CTGCTGCCTCCAGAGCCT 61.401 66.667 0.00 0.00 41.77 4.58
3491 3515 1.951895 GCCATGCACCATCAACTGAGA 60.952 52.381 0.00 0.00 0.00 3.27
3719 3752 9.871238 CACAACTTAAGTGTACCTCTACATAAT 57.129 33.333 9.34 0.00 35.28 1.28
3780 3818 4.592485 AAGTCCTTCACAGTCACACTAG 57.408 45.455 0.00 0.00 0.00 2.57
3796 3834 7.229907 CAGAGGGAGTAGTAGAAAGATAAGTCC 59.770 44.444 0.00 0.00 0.00 3.85
3801 3839 6.410621 GGGACAGAGGGAGTAGTAGAAAGATA 60.411 46.154 0.00 0.00 0.00 1.98
3802 3840 5.451354 GGACAGAGGGAGTAGTAGAAAGAT 58.549 45.833 0.00 0.00 0.00 2.40
3803 3841 4.325187 GGGACAGAGGGAGTAGTAGAAAGA 60.325 50.000 0.00 0.00 0.00 2.52
3804 3842 3.955551 GGGACAGAGGGAGTAGTAGAAAG 59.044 52.174 0.00 0.00 0.00 2.62
3807 3845 2.570098 TGGGACAGAGGGAGTAGTAGA 58.430 52.381 0.00 0.00 0.00 2.59
3850 3888 9.014049 CCTCCTTCCCATAATTCCCATAATATA 57.986 37.037 0.00 0.00 0.00 0.86
3851 3889 7.091353 CCCTCCTTCCCATAATTCCCATAATAT 60.091 40.741 0.00 0.00 0.00 1.28
3852 3890 6.219563 CCCTCCTTCCCATAATTCCCATAATA 59.780 42.308 0.00 0.00 0.00 0.98
3853 3891 5.016675 CCCTCCTTCCCATAATTCCCATAAT 59.983 44.000 0.00 0.00 0.00 1.28
3854 3892 4.356794 CCCTCCTTCCCATAATTCCCATAA 59.643 45.833 0.00 0.00 0.00 1.90
3855 3893 3.922778 CCCTCCTTCCCATAATTCCCATA 59.077 47.826 0.00 0.00 0.00 2.74
3856 3894 2.724117 CCCTCCTTCCCATAATTCCCAT 59.276 50.000 0.00 0.00 0.00 4.00
3857 3895 2.143602 CCCTCCTTCCCATAATTCCCA 58.856 52.381 0.00 0.00 0.00 4.37
3858 3896 2.376855 CTCCCTCCTTCCCATAATTCCC 59.623 54.545 0.00 0.00 0.00 3.97
3859 3897 3.056832 ACTCCCTCCTTCCCATAATTCC 58.943 50.000 0.00 0.00 0.00 3.01
3860 3898 5.155905 TCTACTCCCTCCTTCCCATAATTC 58.844 45.833 0.00 0.00 0.00 2.17
3861 3899 5.171541 TCTACTCCCTCCTTCCCATAATT 57.828 43.478 0.00 0.00 0.00 1.40
3862 3900 4.852991 TCTACTCCCTCCTTCCCATAAT 57.147 45.455 0.00 0.00 0.00 1.28
3863 3901 4.172041 TCATCTACTCCCTCCTTCCCATAA 59.828 45.833 0.00 0.00 0.00 1.90
3864 3902 3.732742 TCATCTACTCCCTCCTTCCCATA 59.267 47.826 0.00 0.00 0.00 2.74
3865 3903 2.524440 TCATCTACTCCCTCCTTCCCAT 59.476 50.000 0.00 0.00 0.00 4.00
3866 3904 1.937350 TCATCTACTCCCTCCTTCCCA 59.063 52.381 0.00 0.00 0.00 4.37
3867 3905 2.777459 TCATCTACTCCCTCCTTCCC 57.223 55.000 0.00 0.00 0.00 3.97
3868 3906 4.742012 TGTATCATCTACTCCCTCCTTCC 58.258 47.826 0.00 0.00 0.00 3.46
3869 3907 5.836358 AGTTGTATCATCTACTCCCTCCTTC 59.164 44.000 0.00 0.00 0.00 3.46
3870 3908 5.782925 AGTTGTATCATCTACTCCCTCCTT 58.217 41.667 0.00 0.00 0.00 3.36
3871 3909 5.411103 AGTTGTATCATCTACTCCCTCCT 57.589 43.478 0.00 0.00 0.00 3.69
3872 3910 7.310113 CCAATAGTTGTATCATCTACTCCCTCC 60.310 44.444 0.00 0.00 0.00 4.30
3873 3911 7.233757 ACCAATAGTTGTATCATCTACTCCCTC 59.766 40.741 0.00 0.00 0.00 4.30
3874 3912 7.015682 CACCAATAGTTGTATCATCTACTCCCT 59.984 40.741 0.00 0.00 0.00 4.20
3875 3913 7.015292 TCACCAATAGTTGTATCATCTACTCCC 59.985 40.741 0.00 0.00 0.00 4.30
3876 3914 7.952671 TCACCAATAGTTGTATCATCTACTCC 58.047 38.462 0.00 0.00 0.00 3.85
3877 3915 9.817809 TTTCACCAATAGTTGTATCATCTACTC 57.182 33.333 0.00 0.00 0.00 2.59
3880 3918 9.952030 TGTTTTCACCAATAGTTGTATCATCTA 57.048 29.630 0.00 0.00 0.00 1.98
3912 3950 4.201851 ACGTTATGCTGCAGTCAATTGATC 60.202 41.667 16.64 5.72 0.00 2.92
3946 3985 6.201806 GCTGGTATAACTCTTGCTAGATTGTG 59.798 42.308 0.00 0.00 0.00 3.33
3951 3990 5.201243 TCAGCTGGTATAACTCTTGCTAGA 58.799 41.667 15.13 0.00 0.00 2.43
3995 4034 2.964464 TGCTGGGCAAAAATCTCTGAAA 59.036 40.909 0.00 0.00 34.76 2.69
4013 4052 2.914695 TTACGGTGTAAACAGGTGCT 57.085 45.000 0.00 0.00 0.00 4.40
4015 4054 3.731089 TCCTTTACGGTGTAAACAGGTG 58.269 45.455 7.12 0.00 0.00 4.00
4040 4079 1.265905 GTTTCCAAACACAGGTAGCGG 59.734 52.381 0.00 0.00 38.74 5.52
4081 4120 1.302192 GCTGGACCTGTTTACGGCA 60.302 57.895 0.00 0.00 35.38 5.69
4100 4139 5.753438 GTGAGCGGTATCAATCAATAACTGA 59.247 40.000 0.00 0.00 38.81 3.41
4110 4149 1.280710 TGGGTTGTGAGCGGTATCAAT 59.719 47.619 7.10 0.00 0.00 2.57
4112 4151 0.036765 GTGGGTTGTGAGCGGTATCA 60.037 55.000 0.00 0.00 0.00 2.15
4232 4302 2.172930 GGATTCAAAGGGAGTAGGGGAC 59.827 54.545 0.00 0.00 0.00 4.46
4240 4310 2.785868 CGCAGGGATTCAAAGGGAG 58.214 57.895 0.00 0.00 0.00 4.30
4256 4326 4.959596 GGCTGCTCCGATCTCCGC 62.960 72.222 0.00 0.00 36.84 5.54
4275 4345 4.675029 CTTCCCGAACACCGCCGT 62.675 66.667 0.00 0.00 36.84 5.68
4295 4365 4.373116 GGTCTCAAGCACCGCCGA 62.373 66.667 0.00 0.00 0.00 5.54
4311 4381 2.037136 CACTTTCAGCCGCCTCTGG 61.037 63.158 0.70 0.00 34.91 3.86
4313 4383 2.359230 GCACTTTCAGCCGCCTCT 60.359 61.111 0.00 0.00 0.00 3.69
4321 4391 1.210931 CGGGCATGTGCACTTTCAG 59.789 57.895 19.41 4.42 43.67 3.02
4324 4394 2.990967 CCCGGGCATGTGCACTTT 60.991 61.111 19.41 2.38 43.67 2.66
4354 4424 2.032634 GGCGGTCGAATCTTGTGCA 61.033 57.895 0.00 0.00 0.00 4.57
4378 4448 0.449388 GCCATCTCTGAAACCAAGCG 59.551 55.000 0.00 0.00 0.00 4.68
4435 4515 4.240103 CATCGCCGGCCATCTCCA 62.240 66.667 23.46 0.00 0.00 3.86
4473 4571 4.640789 ATTGATTACTCGTCGCTCTCTT 57.359 40.909 0.00 0.00 0.00 2.85
4474 4572 4.498345 GGAATTGATTACTCGTCGCTCTCT 60.498 45.833 0.00 0.00 0.00 3.10
4475 4573 3.731717 GGAATTGATTACTCGTCGCTCTC 59.268 47.826 0.00 0.00 0.00 3.20
4476 4574 3.381908 AGGAATTGATTACTCGTCGCTCT 59.618 43.478 0.00 0.00 0.00 4.09
4477 4575 3.707793 AGGAATTGATTACTCGTCGCTC 58.292 45.455 0.00 0.00 0.00 5.03
4478 4576 3.802948 AGGAATTGATTACTCGTCGCT 57.197 42.857 0.00 0.00 0.00 4.93
4479 4577 4.859629 AAAGGAATTGATTACTCGTCGC 57.140 40.909 0.00 0.00 28.61 5.19
4480 4578 5.808540 TGGTAAAGGAATTGATTACTCGTCG 59.191 40.000 0.00 0.00 28.61 5.12
4481 4579 7.039882 TCTGGTAAAGGAATTGATTACTCGTC 58.960 38.462 0.00 0.00 28.61 4.20
4482 4580 6.942976 TCTGGTAAAGGAATTGATTACTCGT 58.057 36.000 0.00 0.00 28.61 4.18
4483 4581 7.495934 ACATCTGGTAAAGGAATTGATTACTCG 59.504 37.037 0.00 0.00 28.61 4.18
4484 4582 8.616076 CACATCTGGTAAAGGAATTGATTACTC 58.384 37.037 0.00 0.00 28.61 2.59
4485 4583 8.328758 TCACATCTGGTAAAGGAATTGATTACT 58.671 33.333 0.00 0.00 30.52 2.24
4486 4584 8.506168 TCACATCTGGTAAAGGAATTGATTAC 57.494 34.615 0.00 0.00 0.00 1.89
4487 4585 8.956426 GTTCACATCTGGTAAAGGAATTGATTA 58.044 33.333 0.00 0.00 0.00 1.75
4488 4586 7.671398 AGTTCACATCTGGTAAAGGAATTGATT 59.329 33.333 0.00 0.00 0.00 2.57
4489 4587 7.177878 AGTTCACATCTGGTAAAGGAATTGAT 58.822 34.615 0.00 0.00 0.00 2.57
4490 4588 6.542821 AGTTCACATCTGGTAAAGGAATTGA 58.457 36.000 0.00 0.00 0.00 2.57
4491 4589 6.824305 AGTTCACATCTGGTAAAGGAATTG 57.176 37.500 0.00 0.00 0.00 2.32
4492 4590 8.793592 GTTTAGTTCACATCTGGTAAAGGAATT 58.206 33.333 0.00 0.00 0.00 2.17
4539 4641 3.830178 TCAGATCACGGTGTTTAAGGAGA 59.170 43.478 8.17 0.00 0.00 3.71
4552 4654 5.571741 ACACTGTTAACGTAATCAGATCACG 59.428 40.000 4.39 4.39 41.32 4.35
4578 4680 5.772672 TGTGTTTGGCTACAGAAATGGTAAT 59.227 36.000 0.00 0.00 0.00 1.89
4602 4704 7.391554 CGACATTATCATATTCCCACTTTGGAT 59.608 37.037 0.00 0.00 40.96 3.41
4612 4714 5.617751 GCTGGCAACGACATTATCATATTCC 60.618 44.000 0.00 0.00 42.51 3.01
4613 4715 5.049474 TGCTGGCAACGACATTATCATATTC 60.049 40.000 0.00 0.00 42.51 1.75
4614 4716 4.821260 TGCTGGCAACGACATTATCATATT 59.179 37.500 0.00 0.00 42.51 1.28
4615 4717 4.388485 TGCTGGCAACGACATTATCATAT 58.612 39.130 0.00 0.00 42.51 1.78
4616 4718 3.802866 TGCTGGCAACGACATTATCATA 58.197 40.909 0.00 0.00 42.51 2.15
4617 4719 2.642427 TGCTGGCAACGACATTATCAT 58.358 42.857 0.00 0.00 42.51 2.45
4618 4720 2.106477 TGCTGGCAACGACATTATCA 57.894 45.000 0.00 0.00 42.51 2.15
4619 4721 2.613595 TGATGCTGGCAACGACATTATC 59.386 45.455 0.00 0.00 42.51 1.75
4620 4722 2.642427 TGATGCTGGCAACGACATTAT 58.358 42.857 0.00 0.00 42.51 1.28
4621 4723 2.106477 TGATGCTGGCAACGACATTA 57.894 45.000 0.00 0.00 42.51 1.90
4622 4724 1.133598 CATGATGCTGGCAACGACATT 59.866 47.619 0.00 0.00 42.51 2.71
4623 4725 0.736636 CATGATGCTGGCAACGACAT 59.263 50.000 0.00 1.55 42.51 3.06
4624 4726 0.606130 ACATGATGCTGGCAACGACA 60.606 50.000 0.00 0.00 42.51 4.35
4625 4727 1.368641 TACATGATGCTGGCAACGAC 58.631 50.000 0.00 0.00 42.51 4.34
4626 4728 2.158914 AGATACATGATGCTGGCAACGA 60.159 45.455 0.00 0.00 42.51 3.85
4627 4729 2.216046 AGATACATGATGCTGGCAACG 58.784 47.619 0.00 0.00 42.51 4.10
4628 4730 4.999311 TCATAGATACATGATGCTGGCAAC 59.001 41.667 0.00 0.00 29.93 4.17
4629 4731 5.231702 TCATAGATACATGATGCTGGCAA 57.768 39.130 0.00 0.00 29.93 4.52
4630 4732 4.895668 TCATAGATACATGATGCTGGCA 57.104 40.909 0.00 0.00 29.93 4.92
4631 4733 6.754702 AAATCATAGATACATGATGCTGGC 57.245 37.500 0.00 0.00 43.33 4.85
4632 4734 9.609346 TCATAAATCATAGATACATGATGCTGG 57.391 33.333 0.00 0.00 43.33 4.85
4676 4778 9.807649 GCTCATTAAACATCCAAAACAGATAAT 57.192 29.630 0.00 0.00 0.00 1.28
4677 4779 9.023962 AGCTCATTAAACATCCAAAACAGATAA 57.976 29.630 0.00 0.00 0.00 1.75
4678 4780 8.579850 AGCTCATTAAACATCCAAAACAGATA 57.420 30.769 0.00 0.00 0.00 1.98
4679 4781 7.472334 AGCTCATTAAACATCCAAAACAGAT 57.528 32.000 0.00 0.00 0.00 2.90
4680 4782 6.899393 AGCTCATTAAACATCCAAAACAGA 57.101 33.333 0.00 0.00 0.00 3.41
4681 4783 7.951530 AAAGCTCATTAAACATCCAAAACAG 57.048 32.000 0.00 0.00 0.00 3.16
4682 4784 9.995003 AATAAAGCTCATTAAACATCCAAAACA 57.005 25.926 0.00 0.00 0.00 2.83
4721 4823 9.363401 GGTTAATAGGCTAGTCCCAAAAATAAT 57.637 33.333 0.00 0.00 34.51 1.28
4722 4824 7.499895 CGGTTAATAGGCTAGTCCCAAAAATAA 59.500 37.037 0.00 0.00 34.51 1.40
4723 4825 6.993902 CGGTTAATAGGCTAGTCCCAAAAATA 59.006 38.462 0.00 0.00 34.51 1.40
4724 4826 5.826208 CGGTTAATAGGCTAGTCCCAAAAAT 59.174 40.000 0.00 0.00 34.51 1.82
4725 4827 5.187687 CGGTTAATAGGCTAGTCCCAAAAA 58.812 41.667 0.00 0.00 34.51 1.94
4726 4828 4.384427 CCGGTTAATAGGCTAGTCCCAAAA 60.384 45.833 0.00 0.00 34.51 2.44
4727 4829 3.135167 CCGGTTAATAGGCTAGTCCCAAA 59.865 47.826 0.00 0.00 34.51 3.28
4728 4830 2.701951 CCGGTTAATAGGCTAGTCCCAA 59.298 50.000 0.00 0.00 34.51 4.12
4729 4831 2.091166 TCCGGTTAATAGGCTAGTCCCA 60.091 50.000 0.00 0.00 34.51 4.37
4730 4832 2.561858 CTCCGGTTAATAGGCTAGTCCC 59.438 54.545 0.00 0.00 34.51 4.46
4731 4833 2.561858 CCTCCGGTTAATAGGCTAGTCC 59.438 54.545 0.00 0.00 0.00 3.85
4732 4834 3.229293 ACCTCCGGTTAATAGGCTAGTC 58.771 50.000 0.00 0.00 33.42 2.59
4733 4835 3.229293 GACCTCCGGTTAATAGGCTAGT 58.771 50.000 0.00 0.00 35.25 2.57
4734 4836 2.561858 GGACCTCCGGTTAATAGGCTAG 59.438 54.545 0.00 0.00 35.25 3.42
4735 4837 2.091166 TGGACCTCCGGTTAATAGGCTA 60.091 50.000 0.00 0.00 35.25 3.93
4736 4838 1.343681 TGGACCTCCGGTTAATAGGCT 60.344 52.381 0.00 0.00 35.25 4.58
4737 4839 1.070289 CTGGACCTCCGGTTAATAGGC 59.930 57.143 0.00 0.00 35.25 3.93
4747 4849 0.320771 CAACTTGGACTGGACCTCCG 60.321 60.000 0.00 0.00 39.43 4.63
4748 4850 0.765510 ACAACTTGGACTGGACCTCC 59.234 55.000 0.00 0.00 0.00 4.30
4749 4851 2.222027 CAACAACTTGGACTGGACCTC 58.778 52.381 0.00 0.00 0.00 3.85
4750 4852 1.564348 ACAACAACTTGGACTGGACCT 59.436 47.619 0.00 0.00 0.00 3.85
4751 4853 2.052782 ACAACAACTTGGACTGGACC 57.947 50.000 0.00 0.00 0.00 4.46
4752 4854 4.450082 AAAACAACAACTTGGACTGGAC 57.550 40.909 0.00 0.00 0.00 4.02
4772 4874 6.273825 TGCGAAACACTAAAATAGGCAAAAA 58.726 32.000 0.00 0.00 0.00 1.94
4773 4875 5.833082 TGCGAAACACTAAAATAGGCAAAA 58.167 33.333 0.00 0.00 0.00 2.44
4774 4876 5.239744 TCTGCGAAACACTAAAATAGGCAAA 59.760 36.000 0.00 0.00 0.00 3.68
4775 4877 4.757657 TCTGCGAAACACTAAAATAGGCAA 59.242 37.500 0.00 0.00 0.00 4.52
4776 4878 4.320023 TCTGCGAAACACTAAAATAGGCA 58.680 39.130 0.00 0.00 0.00 4.75
4777 4879 4.939509 TCTGCGAAACACTAAAATAGGC 57.060 40.909 0.00 0.00 0.00 3.93
4778 4880 8.073768 TCTTTTTCTGCGAAACACTAAAATAGG 58.926 33.333 3.71 0.00 0.00 2.57
4779 4881 9.612620 ATCTTTTTCTGCGAAACACTAAAATAG 57.387 29.630 3.71 0.00 0.00 1.73
4780 4882 9.959749 AATCTTTTTCTGCGAAACACTAAAATA 57.040 25.926 3.71 0.00 0.00 1.40
4781 4883 8.871686 AATCTTTTTCTGCGAAACACTAAAAT 57.128 26.923 3.71 0.00 0.00 1.82
4782 4884 9.959749 ATAATCTTTTTCTGCGAAACACTAAAA 57.040 25.926 3.71 0.00 0.00 1.52
4783 4885 9.607285 GATAATCTTTTTCTGCGAAACACTAAA 57.393 29.630 3.71 0.00 0.00 1.85
4784 4886 8.779303 TGATAATCTTTTTCTGCGAAACACTAA 58.221 29.630 3.71 0.00 0.00 2.24
4785 4887 8.317891 TGATAATCTTTTTCTGCGAAACACTA 57.682 30.769 3.71 0.00 0.00 2.74
4786 4888 7.202016 TGATAATCTTTTTCTGCGAAACACT 57.798 32.000 3.71 0.00 0.00 3.55
4787 4889 7.851822 TTGATAATCTTTTTCTGCGAAACAC 57.148 32.000 3.71 0.00 0.00 3.32
4788 4890 7.112844 CGTTTGATAATCTTTTTCTGCGAAACA 59.887 33.333 3.71 0.00 0.00 2.83
4789 4891 7.409343 CCGTTTGATAATCTTTTTCTGCGAAAC 60.409 37.037 3.71 0.00 0.00 2.78
4790 4892 6.580791 CCGTTTGATAATCTTTTTCTGCGAAA 59.419 34.615 0.00 0.55 0.00 3.46
4791 4893 6.072948 TCCGTTTGATAATCTTTTTCTGCGAA 60.073 34.615 0.00 0.00 0.00 4.70
4792 4894 5.410132 TCCGTTTGATAATCTTTTTCTGCGA 59.590 36.000 0.00 0.00 0.00 5.10
4793 4895 5.627172 TCCGTTTGATAATCTTTTTCTGCG 58.373 37.500 0.00 0.00 0.00 5.18
4794 4896 6.612306 ACTCCGTTTGATAATCTTTTTCTGC 58.388 36.000 0.00 0.00 0.00 4.26
4795 4897 7.094805 TGGACTCCGTTTGATAATCTTTTTCTG 60.095 37.037 0.00 0.00 0.00 3.02
4796 4898 6.940298 TGGACTCCGTTTGATAATCTTTTTCT 59.060 34.615 0.00 0.00 0.00 2.52
4797 4899 7.141100 TGGACTCCGTTTGATAATCTTTTTC 57.859 36.000 0.00 0.00 0.00 2.29
4798 4900 7.519032 TTGGACTCCGTTTGATAATCTTTTT 57.481 32.000 0.00 0.00 0.00 1.94
4799 4901 7.368059 GTTTGGACTCCGTTTGATAATCTTTT 58.632 34.615 0.00 0.00 0.00 2.27
4800 4902 6.348213 CGTTTGGACTCCGTTTGATAATCTTT 60.348 38.462 0.00 0.00 0.00 2.52
4801 4903 5.121768 CGTTTGGACTCCGTTTGATAATCTT 59.878 40.000 0.00 0.00 0.00 2.40
4802 4904 4.630069 CGTTTGGACTCCGTTTGATAATCT 59.370 41.667 0.00 0.00 0.00 2.40
4803 4905 4.201783 CCGTTTGGACTCCGTTTGATAATC 60.202 45.833 0.00 0.00 37.49 1.75
4804 4906 3.687698 CCGTTTGGACTCCGTTTGATAAT 59.312 43.478 0.00 0.00 37.49 1.28
4805 4907 3.068560 CCGTTTGGACTCCGTTTGATAA 58.931 45.455 0.00 0.00 37.49 1.75
4806 4908 2.299582 TCCGTTTGGACTCCGTTTGATA 59.700 45.455 0.00 0.00 40.17 2.15
4807 4909 1.071071 TCCGTTTGGACTCCGTTTGAT 59.929 47.619 0.00 0.00 40.17 2.57
4808 4910 0.464870 TCCGTTTGGACTCCGTTTGA 59.535 50.000 0.00 0.00 40.17 2.69
4809 4911 1.301423 TTCCGTTTGGACTCCGTTTG 58.699 50.000 0.00 0.00 46.45 2.93
4810 4912 1.877443 CATTCCGTTTGGACTCCGTTT 59.123 47.619 0.00 0.00 46.45 3.60
4811 4913 1.071071 TCATTCCGTTTGGACTCCGTT 59.929 47.619 0.00 0.00 46.45 4.44
4812 4914 0.682852 TCATTCCGTTTGGACTCCGT 59.317 50.000 0.00 0.00 46.45 4.69
4813 4915 1.803334 TTCATTCCGTTTGGACTCCG 58.197 50.000 0.00 0.00 46.45 4.63
4814 4916 2.228103 GGTTTCATTCCGTTTGGACTCC 59.772 50.000 0.00 0.00 46.45 3.85
4815 4917 3.146847 AGGTTTCATTCCGTTTGGACTC 58.853 45.455 0.00 0.00 46.45 3.36
4816 4918 3.223674 AGGTTTCATTCCGTTTGGACT 57.776 42.857 0.00 0.00 46.45 3.85
4817 4919 3.608474 CGAAGGTTTCATTCCGTTTGGAC 60.608 47.826 0.00 0.00 46.45 4.02
4818 4920 2.550606 CGAAGGTTTCATTCCGTTTGGA 59.449 45.455 0.00 0.00 44.61 3.53
4819 4921 2.928694 CGAAGGTTTCATTCCGTTTGG 58.071 47.619 0.00 0.00 0.00 3.28
4835 4937 5.472137 TGTTCCAAAAATAACTCTCCCGAAG 59.528 40.000 0.00 0.00 0.00 3.79
4836 4938 5.378332 TGTTCCAAAAATAACTCTCCCGAA 58.622 37.500 0.00 0.00 0.00 4.30
4837 4939 4.975631 TGTTCCAAAAATAACTCTCCCGA 58.024 39.130 0.00 0.00 0.00 5.14
4838 4940 5.699097 TTGTTCCAAAAATAACTCTCCCG 57.301 39.130 0.00 0.00 0.00 5.14
4839 4941 5.918576 CGTTTGTTCCAAAAATAACTCTCCC 59.081 40.000 0.00 0.00 0.00 4.30
4840 4942 5.401376 GCGTTTGTTCCAAAAATAACTCTCC 59.599 40.000 0.00 0.00 0.00 3.71
4841 4943 5.974751 TGCGTTTGTTCCAAAAATAACTCTC 59.025 36.000 0.00 0.00 0.00 3.20
4842 4944 5.897050 TGCGTTTGTTCCAAAAATAACTCT 58.103 33.333 0.00 0.00 0.00 3.24
4843 4945 6.576551 TTGCGTTTGTTCCAAAAATAACTC 57.423 33.333 0.00 0.00 0.00 3.01
4844 4946 6.201997 GGATTGCGTTTGTTCCAAAAATAACT 59.798 34.615 0.00 0.00 0.00 2.24
4845 4947 6.018669 TGGATTGCGTTTGTTCCAAAAATAAC 60.019 34.615 0.00 0.00 35.38 1.89
4846 4948 6.049149 TGGATTGCGTTTGTTCCAAAAATAA 58.951 32.000 0.00 0.00 35.38 1.40
4847 4949 5.601662 TGGATTGCGTTTGTTCCAAAAATA 58.398 33.333 0.00 0.00 35.38 1.40
4848 4950 4.446371 TGGATTGCGTTTGTTCCAAAAAT 58.554 34.783 0.00 0.00 35.38 1.82
4849 4951 3.861840 TGGATTGCGTTTGTTCCAAAAA 58.138 36.364 0.00 0.00 35.38 1.94
4850 4952 3.452474 CTGGATTGCGTTTGTTCCAAAA 58.548 40.909 0.00 0.00 37.78 2.44
4851 4953 2.223923 CCTGGATTGCGTTTGTTCCAAA 60.224 45.455 0.00 0.00 37.78 3.28
4852 4954 1.339610 CCTGGATTGCGTTTGTTCCAA 59.660 47.619 0.00 0.00 37.78 3.53
4853 4955 0.958091 CCTGGATTGCGTTTGTTCCA 59.042 50.000 0.00 0.00 36.81 3.53
4854 4956 1.243902 TCCTGGATTGCGTTTGTTCC 58.756 50.000 0.00 0.00 0.00 3.62
4855 4957 3.689649 AGTATCCTGGATTGCGTTTGTTC 59.310 43.478 15.55 0.00 0.00 3.18
4856 4958 3.686016 AGTATCCTGGATTGCGTTTGTT 58.314 40.909 15.55 0.00 0.00 2.83
4857 4959 3.350219 AGTATCCTGGATTGCGTTTGT 57.650 42.857 15.55 0.00 0.00 2.83
4858 4960 3.181497 CCAAGTATCCTGGATTGCGTTTG 60.181 47.826 15.55 11.57 0.00 2.93
4859 4961 3.016736 CCAAGTATCCTGGATTGCGTTT 58.983 45.455 15.55 0.33 0.00 3.60
4860 4962 2.238646 TCCAAGTATCCTGGATTGCGTT 59.761 45.455 15.55 0.92 0.00 4.84
4861 4963 1.837439 TCCAAGTATCCTGGATTGCGT 59.163 47.619 15.55 4.20 0.00 5.24
4862 4964 2.158900 ACTCCAAGTATCCTGGATTGCG 60.159 50.000 15.55 4.82 0.00 4.85
4863 4965 3.567478 ACTCCAAGTATCCTGGATTGC 57.433 47.619 15.55 8.53 0.00 3.56
4864 4966 5.363868 TGTCTACTCCAAGTATCCTGGATTG 59.636 44.000 15.55 8.00 29.08 2.67
4865 4967 5.529289 TGTCTACTCCAAGTATCCTGGATT 58.471 41.667 15.55 0.00 29.08 3.01
4866 4968 5.144159 TGTCTACTCCAAGTATCCTGGAT 57.856 43.478 14.66 14.66 29.08 3.41
4867 4969 4.603094 TGTCTACTCCAAGTATCCTGGA 57.397 45.455 0.00 0.00 29.08 3.86
4868 4970 4.895889 TGATGTCTACTCCAAGTATCCTGG 59.104 45.833 0.00 0.00 29.08 4.45
4869 4971 5.010516 CCTGATGTCTACTCCAAGTATCCTG 59.989 48.000 0.00 0.00 29.08 3.86
4870 4972 5.144100 CCTGATGTCTACTCCAAGTATCCT 58.856 45.833 0.00 0.00 29.08 3.24
4871 4973 4.282195 CCCTGATGTCTACTCCAAGTATCC 59.718 50.000 0.00 0.00 29.08 2.59
4872 4974 5.141182 TCCCTGATGTCTACTCCAAGTATC 58.859 45.833 0.00 0.00 29.08 2.24
4873 4975 5.144159 TCCCTGATGTCTACTCCAAGTAT 57.856 43.478 0.00 0.00 29.08 2.12
4874 4976 4.603094 TCCCTGATGTCTACTCCAAGTA 57.397 45.455 0.00 0.00 0.00 2.24
4875 4977 3.474798 TCCCTGATGTCTACTCCAAGT 57.525 47.619 0.00 0.00 0.00 3.16
4876 4978 3.431486 GCTTCCCTGATGTCTACTCCAAG 60.431 52.174 0.00 0.00 0.00 3.61
4877 4979 2.501723 GCTTCCCTGATGTCTACTCCAA 59.498 50.000 0.00 0.00 0.00 3.53
4878 4980 2.111384 GCTTCCCTGATGTCTACTCCA 58.889 52.381 0.00 0.00 0.00 3.86
4879 4981 2.111384 TGCTTCCCTGATGTCTACTCC 58.889 52.381 0.00 0.00 0.00 3.85
4880 4982 3.526534 GTTGCTTCCCTGATGTCTACTC 58.473 50.000 0.00 0.00 0.00 2.59
4881 4983 2.093973 CGTTGCTTCCCTGATGTCTACT 60.094 50.000 0.00 0.00 0.00 2.57
4882 4984 2.094182 TCGTTGCTTCCCTGATGTCTAC 60.094 50.000 0.00 0.00 0.00 2.59
4883 4985 2.166459 CTCGTTGCTTCCCTGATGTCTA 59.834 50.000 0.00 0.00 0.00 2.59
4884 4986 0.976641 TCGTTGCTTCCCTGATGTCT 59.023 50.000 0.00 0.00 0.00 3.41
4885 4987 1.363744 CTCGTTGCTTCCCTGATGTC 58.636 55.000 0.00 0.00 0.00 3.06
4886 4988 0.036010 CCTCGTTGCTTCCCTGATGT 60.036 55.000 0.00 0.00 0.00 3.06
4887 4989 0.036010 ACCTCGTTGCTTCCCTGATG 60.036 55.000 0.00 0.00 0.00 3.07
4888 4990 0.036010 CACCTCGTTGCTTCCCTGAT 60.036 55.000 0.00 0.00 0.00 2.90
4889 4991 1.371183 CACCTCGTTGCTTCCCTGA 59.629 57.895 0.00 0.00 0.00 3.86
4890 4992 1.672356 CCACCTCGTTGCTTCCCTG 60.672 63.158 0.00 0.00 0.00 4.45
4891 4993 2.750350 CCACCTCGTTGCTTCCCT 59.250 61.111 0.00 0.00 0.00 4.20
4892 4994 3.056328 GCCACCTCGTTGCTTCCC 61.056 66.667 0.00 0.00 0.00 3.97
4893 4995 3.056328 GGCCACCTCGTTGCTTCC 61.056 66.667 0.00 0.00 0.00 3.46
4894 4996 3.423154 CGGCCACCTCGTTGCTTC 61.423 66.667 2.24 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.