Multiple sequence alignment - TraesCS2B01G384600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G384600 chr2B 100.000 3468 0 0 1 3468 548514116 548510649 0.000000e+00 6405.0
1 TraesCS2B01G384600 chr2B 75.974 154 27 10 11 161 30421836 30421690 1.730000e-08 71.3
2 TraesCS2B01G384600 chr2D 91.794 1304 77 16 435 1721 469980077 469978787 0.000000e+00 1788.0
3 TraesCS2B01G384600 chr2D 89.189 888 54 24 1862 2725 469978753 469977884 0.000000e+00 1070.0
4 TraesCS2B01G384600 chr2D 83.721 344 35 15 1 331 469980494 469980159 4.350000e-79 305.0
5 TraesCS2B01G384600 chr2D 89.706 136 9 5 2849 2982 469977728 469977596 5.950000e-38 169.0
6 TraesCS2B01G384600 chr2D 97.701 87 1 1 2904 2990 423859914 423859829 7.760000e-32 148.0
7 TraesCS2B01G384600 chr2D 88.542 96 3 5 1775 1863 257390722 257390816 3.660000e-20 110.0
8 TraesCS2B01G384600 chr2A 91.590 1308 76 13 435 1721 611283184 611281890 0.000000e+00 1775.0
9 TraesCS2B01G384600 chr2A 84.889 900 63 35 1862 2722 611281856 611280991 0.000000e+00 841.0
10 TraesCS2B01G384600 chr2A 86.691 278 21 2 2898 3160 611280779 611280503 9.410000e-76 294.0
11 TraesCS2B01G384600 chr2A 82.036 334 42 15 1 320 611283583 611283254 5.710000e-68 268.0
12 TraesCS2B01G384600 chr2A 94.949 99 2 3 2894 2991 564616389 564616485 6.000000e-33 152.0
13 TraesCS2B01G384600 chr2A 79.755 163 30 3 1366 1525 631789110 631789272 7.870000e-22 115.0
14 TraesCS2B01G384600 chr7B 94.792 96 1 4 2898 2991 164164701 164164794 2.790000e-31 147.0
15 TraesCS2B01G384600 chr3B 96.629 89 1 2 2902 2990 805612356 805612442 2.790000e-31 147.0
16 TraesCS2B01G384600 chr3B 94.737 95 1 4 2897 2990 821733114 821733023 1.000000e-30 145.0
17 TraesCS2B01G384600 chr3A 95.699 93 0 4 2900 2990 744059861 744059771 2.790000e-31 147.0
18 TraesCS2B01G384600 chr3A 87.912 91 7 4 1775 1862 130848192 130848281 1.700000e-18 104.0
19 TraesCS2B01G384600 chr3A 100.000 33 0 0 3436 3468 21233204 21233172 1.040000e-05 62.1
20 TraesCS2B01G384600 chr1D 96.629 89 1 2 2902 2990 398975519 398975433 2.790000e-31 147.0
21 TraesCS2B01G384600 chr1D 87.500 96 4 6 1774 1862 494466296 494466202 1.700000e-18 104.0
22 TraesCS2B01G384600 chr1D 83.333 114 11 6 1775 1880 163046805 163046692 7.920000e-17 99.0
23 TraesCS2B01G384600 chr1D 82.500 120 12 7 1775 1888 206955608 206955724 2.850000e-16 97.1
24 TraesCS2B01G384600 chr5B 85.586 111 5 7 1775 1878 123210695 123210589 4.730000e-19 106.0
25 TraesCS2B01G384600 chr5B 82.353 68 9 3 97 163 670592807 670592872 4.840000e-04 56.5
26 TraesCS2B01G384600 chr6D 86.000 100 7 5 1775 1868 439684792 439684694 2.200000e-17 100.0
27 TraesCS2B01G384600 chr6D 79.389 131 16 7 97 219 11666938 11666811 7.980000e-12 82.4
28 TraesCS2B01G384600 chr5D 83.478 115 10 7 1775 1882 9525302 9525190 7.920000e-17 99.0
29 TraesCS2B01G384600 chr4B 83.636 110 10 6 1775 1877 389466850 389466958 2.850000e-16 97.1
30 TraesCS2B01G384600 chrUn 77.976 168 23 11 94 255 10649922 10649763 3.690000e-15 93.5
31 TraesCS2B01G384600 chr3D 85.507 69 9 1 96 163 611258457 611258525 1.730000e-08 71.3
32 TraesCS2B01G384600 chr3D 100.000 33 0 0 3436 3468 288665594 288665562 1.040000e-05 62.1
33 TraesCS2B01G384600 chr1A 86.154 65 9 0 99 163 33864301 33864237 1.730000e-08 71.3
34 TraesCS2B01G384600 chr1A 84.058 69 10 1 97 165 478904401 478904468 8.030000e-07 65.8
35 TraesCS2B01G384600 chr7A 100.000 33 0 0 3436 3468 635237454 635237422 1.040000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G384600 chr2B 548510649 548514116 3467 True 6405.0 6405 100.0000 1 3468 1 chr2B.!!$R2 3467
1 TraesCS2B01G384600 chr2D 469977596 469980494 2898 True 833.0 1788 88.6025 1 2982 4 chr2D.!!$R2 2981
2 TraesCS2B01G384600 chr2A 611280503 611283583 3080 True 794.5 1775 86.3015 1 3160 4 chr2A.!!$R1 3159

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
894 938 1.203994 TGTAACCTCGGTAGCAGAAGC 59.796 52.381 0.0 0.0 42.56 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2889 3122 0.250901 CCTTGTTGCTACACTGCCCT 60.251 55.0 0.0 0.0 32.98 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 192 8.747538 AAGGTCACTAACATATTATTGGGAAC 57.252 34.615 0.00 0.00 0.00 3.62
189 193 6.990349 AGGTCACTAACATATTATTGGGAACG 59.010 38.462 0.00 0.00 0.00 3.95
190 194 6.764560 GGTCACTAACATATTATTGGGAACGT 59.235 38.462 0.00 0.00 0.00 3.99
191 195 7.254658 GGTCACTAACATATTATTGGGAACGTG 60.255 40.741 0.00 0.00 0.00 4.49
192 196 7.493320 GTCACTAACATATTATTGGGAACGTGA 59.507 37.037 0.00 0.00 0.00 4.35
194 198 8.120465 CACTAACATATTATTGGGAACGTGAAC 58.880 37.037 0.00 0.00 0.00 3.18
195 199 5.728351 ACATATTATTGGGAACGTGAACG 57.272 39.130 0.40 0.40 46.33 3.95
417 434 6.822073 AATTTTTAAGCACGTGAACCTTTC 57.178 33.333 22.23 0.00 0.00 2.62
466 505 6.128117 ACGAACATCTTTAACACCGCATTAAT 60.128 34.615 0.00 0.00 0.00 1.40
582 621 3.124921 GTGTGCGCGCTTATGGGT 61.125 61.111 33.29 0.00 0.00 4.51
589 628 2.589540 CGCTTATGGGTCTGGCCA 59.410 61.111 4.71 4.71 39.65 5.36
602 643 4.441495 GGGTCTGGCCAATTTAAATAGCAC 60.441 45.833 19.29 11.77 39.65 4.40
604 645 3.380004 TCTGGCCAATTTAAATAGCACCG 59.620 43.478 19.29 10.27 0.00 4.94
674 715 4.456253 CGACGACGACCGGAGTGG 62.456 72.222 9.46 11.91 43.93 4.00
710 751 2.570135 GAGATGCCATGAGAAACCTCC 58.430 52.381 0.00 0.00 0.00 4.30
843 884 2.548920 GCTCTGAGCCGCTTTATATGGT 60.549 50.000 18.80 0.00 34.48 3.55
893 937 2.492484 ACTGTAACCTCGGTAGCAGAAG 59.508 50.000 19.72 4.20 35.49 2.85
894 938 1.203994 TGTAACCTCGGTAGCAGAAGC 59.796 52.381 0.00 0.00 42.56 3.86
969 1013 1.303317 GTTCATCGGTTGCCACCCT 60.303 57.895 0.49 0.00 40.52 4.34
1183 1230 1.522580 GGCAGCAAGATCGAGGACC 60.523 63.158 0.00 0.00 0.00 4.46
1294 1341 2.203877 ACGTCCCCAAGCCCTGTA 60.204 61.111 0.00 0.00 0.00 2.74
1295 1342 2.267961 CGTCCCCAAGCCCTGTAC 59.732 66.667 0.00 0.00 0.00 2.90
1323 1370 4.213906 CGCATACATACATCTGCCATTTCA 59.786 41.667 0.00 0.00 0.00 2.69
1326 1373 6.567321 GCATACATACATCTGCCATTTCAGTC 60.567 42.308 0.00 0.00 35.63 3.51
1371 1420 5.532406 TGTTAATAATTGGGCTGAGCAGATC 59.468 40.000 6.82 0.00 0.00 2.75
1505 1554 2.154854 ACAACGGCATCATCTATCCG 57.845 50.000 0.00 0.00 46.61 4.18
1520 1569 1.390565 ATCCGTGGGAGACTTACGAG 58.609 55.000 8.76 0.00 41.21 4.18
1575 1627 3.820467 TGATTTGTGATTTCAGTTCGGCT 59.180 39.130 0.00 0.00 0.00 5.52
1610 1664 6.196571 ACATTTAACGTCTTCCTTTTTGTCG 58.803 36.000 0.00 0.00 0.00 4.35
1655 1720 2.218603 GGGTTCAACGTGTTCATGTCT 58.781 47.619 0.00 0.00 0.00 3.41
1721 1786 1.068250 GCCCGTGAGTGAGCTATCC 59.932 63.158 0.00 0.00 0.00 2.59
1722 1787 1.742768 CCCGTGAGTGAGCTATCCC 59.257 63.158 0.00 0.00 0.00 3.85
1723 1788 0.757188 CCCGTGAGTGAGCTATCCCT 60.757 60.000 0.00 0.00 0.00 4.20
1724 1789 0.671251 CCGTGAGTGAGCTATCCCTC 59.329 60.000 0.00 0.00 0.00 4.30
1725 1790 0.309302 CGTGAGTGAGCTATCCCTCG 59.691 60.000 0.00 0.00 34.56 4.63
1726 1791 1.681538 GTGAGTGAGCTATCCCTCGA 58.318 55.000 0.00 0.00 34.56 4.04
1727 1792 2.025155 GTGAGTGAGCTATCCCTCGAA 58.975 52.381 0.00 0.00 34.56 3.71
1728 1793 2.625790 GTGAGTGAGCTATCCCTCGAAT 59.374 50.000 0.00 0.00 34.56 3.34
1729 1794 3.821600 GTGAGTGAGCTATCCCTCGAATA 59.178 47.826 0.00 0.00 34.56 1.75
1730 1795 4.075682 TGAGTGAGCTATCCCTCGAATAG 58.924 47.826 0.00 0.00 34.56 1.73
1731 1796 4.202472 TGAGTGAGCTATCCCTCGAATAGA 60.202 45.833 6.77 0.00 34.56 1.98
1732 1797 4.331968 AGTGAGCTATCCCTCGAATAGAG 58.668 47.826 6.77 0.00 46.44 2.43
1766 1831 3.569701 AGAAATCACACCGTGCTTCATTT 59.430 39.130 0.00 0.00 31.89 2.32
1768 1833 4.419522 AATCACACCGTGCTTCATTTAC 57.580 40.909 0.00 0.00 32.98 2.01
1771 1836 2.159627 CACACCGTGCTTCATTTACTCC 59.840 50.000 0.00 0.00 0.00 3.85
1772 1837 1.737793 CACCGTGCTTCATTTACTCCC 59.262 52.381 0.00 0.00 0.00 4.30
1774 1839 2.835764 ACCGTGCTTCATTTACTCCCTA 59.164 45.455 0.00 0.00 0.00 3.53
1775 1840 3.195661 CCGTGCTTCATTTACTCCCTAC 58.804 50.000 0.00 0.00 0.00 3.18
1776 1841 3.369052 CCGTGCTTCATTTACTCCCTACA 60.369 47.826 0.00 0.00 0.00 2.74
1777 1842 4.250464 CGTGCTTCATTTACTCCCTACAA 58.750 43.478 0.00 0.00 0.00 2.41
1778 1843 4.693566 CGTGCTTCATTTACTCCCTACAAA 59.306 41.667 0.00 0.00 0.00 2.83
1779 1844 5.354234 CGTGCTTCATTTACTCCCTACAAAT 59.646 40.000 0.00 0.00 0.00 2.32
1780 1845 6.128007 CGTGCTTCATTTACTCCCTACAAATT 60.128 38.462 0.00 0.00 0.00 1.82
1781 1846 7.574967 CGTGCTTCATTTACTCCCTACAAATTT 60.575 37.037 0.00 0.00 0.00 1.82
1782 1847 8.088365 GTGCTTCATTTACTCCCTACAAATTTT 58.912 33.333 0.00 0.00 0.00 1.82
1783 1848 9.303116 TGCTTCATTTACTCCCTACAAATTTTA 57.697 29.630 0.00 0.00 0.00 1.52
1784 1849 9.788960 GCTTCATTTACTCCCTACAAATTTTAG 57.211 33.333 0.00 0.00 0.00 1.85
1792 1857 8.431910 ACTCCCTACAAATTTTAGAGTGTAGA 57.568 34.615 12.32 0.00 44.01 2.59
1793 1858 9.047947 ACTCCCTACAAATTTTAGAGTGTAGAT 57.952 33.333 12.32 0.00 44.01 1.98
1794 1859 9.892130 CTCCCTACAAATTTTAGAGTGTAGATT 57.108 33.333 12.32 0.00 44.01 2.40
1795 1860 9.886132 TCCCTACAAATTTTAGAGTGTAGATTC 57.114 33.333 12.32 0.00 44.01 2.52
1796 1861 9.667107 CCCTACAAATTTTAGAGTGTAGATTCA 57.333 33.333 12.32 0.00 44.01 2.57
1809 1874 7.954788 AGTGTAGATTCACTCAGTTTTTCTC 57.045 36.000 0.00 0.00 44.07 2.87
1810 1875 6.931840 AGTGTAGATTCACTCAGTTTTTCTCC 59.068 38.462 0.00 0.00 44.07 3.71
1811 1876 5.926542 TGTAGATTCACTCAGTTTTTCTCCG 59.073 40.000 0.00 0.00 0.00 4.63
1812 1877 4.962155 AGATTCACTCAGTTTTTCTCCGT 58.038 39.130 0.00 0.00 0.00 4.69
1813 1878 6.097915 AGATTCACTCAGTTTTTCTCCGTA 57.902 37.500 0.00 0.00 0.00 4.02
1814 1879 5.927115 AGATTCACTCAGTTTTTCTCCGTAC 59.073 40.000 0.00 0.00 0.00 3.67
1815 1880 4.659111 TCACTCAGTTTTTCTCCGTACA 57.341 40.909 0.00 0.00 0.00 2.90
1816 1881 5.013568 TCACTCAGTTTTTCTCCGTACAA 57.986 39.130 0.00 0.00 0.00 2.41
1817 1882 5.421277 TCACTCAGTTTTTCTCCGTACAAA 58.579 37.500 0.00 0.00 0.00 2.83
1818 1883 6.053005 TCACTCAGTTTTTCTCCGTACAAAT 58.947 36.000 0.00 0.00 0.00 2.32
1819 1884 7.211573 TCACTCAGTTTTTCTCCGTACAAATA 58.788 34.615 0.00 0.00 0.00 1.40
1820 1885 7.876068 TCACTCAGTTTTTCTCCGTACAAATAT 59.124 33.333 0.00 0.00 0.00 1.28
1821 1886 8.504005 CACTCAGTTTTTCTCCGTACAAATATT 58.496 33.333 0.00 0.00 0.00 1.28
1822 1887 9.715121 ACTCAGTTTTTCTCCGTACAAATATTA 57.285 29.630 0.00 0.00 0.00 0.98
1856 1921 9.454859 AGAAAGACAAATATTTAGGAACAGAGG 57.545 33.333 0.00 0.00 0.00 3.69
1857 1922 8.581253 AAAGACAAATATTTAGGAACAGAGGG 57.419 34.615 0.00 0.00 0.00 4.30
1858 1923 7.510675 AGACAAATATTTAGGAACAGAGGGA 57.489 36.000 0.00 0.00 0.00 4.20
1859 1924 7.569240 AGACAAATATTTAGGAACAGAGGGAG 58.431 38.462 0.00 0.00 0.00 4.30
1860 1925 7.182930 AGACAAATATTTAGGAACAGAGGGAGT 59.817 37.037 0.00 0.00 0.00 3.85
1861 1926 8.388656 ACAAATATTTAGGAACAGAGGGAGTA 57.611 34.615 0.00 0.00 0.00 2.59
1862 1927 8.487028 ACAAATATTTAGGAACAGAGGGAGTAG 58.513 37.037 0.00 0.00 0.00 2.57
1863 1928 8.487028 CAAATATTTAGGAACAGAGGGAGTAGT 58.513 37.037 0.00 0.00 0.00 2.73
1864 1929 7.842887 ATATTTAGGAACAGAGGGAGTAGTC 57.157 40.000 0.00 0.00 0.00 2.59
1865 1930 4.949966 TTAGGAACAGAGGGAGTAGTCT 57.050 45.455 0.00 0.00 0.00 3.24
1866 1931 3.837399 AGGAACAGAGGGAGTAGTCTT 57.163 47.619 0.00 0.00 0.00 3.01
1867 1932 4.134933 AGGAACAGAGGGAGTAGTCTTT 57.865 45.455 0.00 0.00 0.00 2.52
1868 1933 4.494591 AGGAACAGAGGGAGTAGTCTTTT 58.505 43.478 0.00 0.00 0.00 2.27
1869 1934 4.284746 AGGAACAGAGGGAGTAGTCTTTTG 59.715 45.833 0.00 0.00 0.00 2.44
1870 1935 4.040584 GGAACAGAGGGAGTAGTCTTTTGT 59.959 45.833 0.00 0.00 0.00 2.83
1871 1936 5.245526 GGAACAGAGGGAGTAGTCTTTTGTA 59.754 44.000 0.00 0.00 0.00 2.41
1929 2002 1.925972 GCCCAACCCTCTCTTCCCT 60.926 63.158 0.00 0.00 0.00 4.20
2000 2073 2.162338 TACGACAAAGAGGGCCGGTG 62.162 60.000 1.90 0.00 0.00 4.94
2038 2114 8.931385 AATTACTGTTAATTATGTACCGACGT 57.069 30.769 0.00 0.00 36.34 4.34
2061 2137 0.798009 GGCGGCGAATGTGAAATGTG 60.798 55.000 12.98 0.00 0.00 3.21
2068 2144 4.532276 GCGAATGTGAAATGTGTGTTGTA 58.468 39.130 0.00 0.00 0.00 2.41
2210 2286 1.664151 CGATTTCTTCGGCTGGTAACC 59.336 52.381 0.00 0.00 44.28 2.85
2283 2369 3.311322 GCTGCGGCTATGTTGTTGTATAA 59.689 43.478 11.21 0.00 35.22 0.98
2286 2372 4.331443 TGCGGCTATGTTGTTGTATAACTG 59.669 41.667 0.00 0.00 37.68 3.16
2301 2392 5.714806 TGTATAACTGACTGGTGTGAGATGA 59.285 40.000 0.00 0.00 31.77 2.92
2302 2393 5.946942 ATAACTGACTGGTGTGAGATGAT 57.053 39.130 0.00 0.00 31.77 2.45
2304 2395 4.727507 ACTGACTGGTGTGAGATGATAC 57.272 45.455 0.00 0.00 31.77 2.24
2342 2439 0.532573 GATGAAGCTGGAGTGGTCGA 59.467 55.000 0.00 0.00 0.00 4.20
2359 2456 1.878522 GATCCTGTACGTGCTGGCG 60.879 63.158 21.97 3.01 37.94 5.69
2464 2561 0.969149 TGGAGCACGTCAAGATGTCT 59.031 50.000 0.00 0.00 0.00 3.41
2473 2570 5.402398 CACGTCAAGATGTCTTAGATCACA 58.598 41.667 0.00 0.00 34.28 3.58
2475 2572 5.039984 CGTCAAGATGTCTTAGATCACAGG 58.960 45.833 0.00 0.00 34.28 4.00
2476 2573 4.808364 GTCAAGATGTCTTAGATCACAGGC 59.192 45.833 0.00 0.00 34.28 4.85
2478 2575 4.935352 AGATGTCTTAGATCACAGGCTC 57.065 45.455 0.00 0.00 0.00 4.70
2479 2576 4.285020 AGATGTCTTAGATCACAGGCTCA 58.715 43.478 0.00 0.00 0.00 4.26
2480 2577 4.900652 AGATGTCTTAGATCACAGGCTCAT 59.099 41.667 0.00 0.00 0.00 2.90
2483 2580 2.035193 TCTTAGATCACAGGCTCATCGC 59.965 50.000 0.00 0.00 38.13 4.58
2546 2643 0.598158 GCTTTCCGTGTCCGTGTGTA 60.598 55.000 0.00 0.00 0.00 2.90
2548 2645 2.671914 GCTTTCCGTGTCCGTGTGTATA 60.672 50.000 0.00 0.00 0.00 1.47
2671 2778 1.900545 CTCCCGTCCTTCCCTGGTTC 61.901 65.000 0.00 0.00 0.00 3.62
2672 2779 2.669240 CCGTCCTTCCCTGGTTCC 59.331 66.667 0.00 0.00 0.00 3.62
2673 2780 2.264794 CGTCCTTCCCTGGTTCCG 59.735 66.667 0.00 0.00 0.00 4.30
2674 2781 2.280552 CGTCCTTCCCTGGTTCCGA 61.281 63.158 0.00 0.00 0.00 4.55
2675 2782 1.295746 GTCCTTCCCTGGTTCCGAC 59.704 63.158 0.00 0.00 0.00 4.79
2712 2879 3.918220 GGCGCGTCGATTGCAGAG 61.918 66.667 8.43 0.00 0.00 3.35
2721 2895 4.554919 GCGTCGATTGCAGAGTAGATAAGA 60.555 45.833 7.63 0.00 0.00 2.10
2728 2902 1.948145 CAGAGTAGATAAGACCGGCGT 59.052 52.381 6.01 0.00 0.00 5.68
2729 2903 1.948145 AGAGTAGATAAGACCGGCGTG 59.052 52.381 6.01 0.00 0.00 5.34
2731 2905 1.027357 GTAGATAAGACCGGCGTGGA 58.973 55.000 6.01 0.00 42.00 4.02
2732 2906 1.001597 GTAGATAAGACCGGCGTGGAG 60.002 57.143 6.01 0.00 42.00 3.86
2733 2907 0.395311 AGATAAGACCGGCGTGGAGA 60.395 55.000 6.01 0.00 42.00 3.71
2734 2908 0.030908 GATAAGACCGGCGTGGAGAG 59.969 60.000 6.01 0.00 42.00 3.20
2788 2962 2.809601 CGGTCGCTGTGCTGTACC 60.810 66.667 0.00 0.00 0.00 3.34
2794 2968 1.371183 GCTGTGCTGTACCAGGTCA 59.629 57.895 0.00 0.00 31.21 4.02
2813 2993 1.274728 CATGAGGATCCGGATCAGTCC 59.725 57.143 38.29 26.64 39.54 3.85
2814 2994 0.261696 TGAGGATCCGGATCAGTCCA 59.738 55.000 38.29 27.00 45.37 4.02
2833 3043 2.418628 CCATCACAATGGTTACGTGGTC 59.581 50.000 0.00 0.00 46.43 4.02
2834 3044 2.172851 TCACAATGGTTACGTGGTCC 57.827 50.000 0.00 0.00 0.00 4.46
2836 3046 0.766131 ACAATGGTTACGTGGTCCCA 59.234 50.000 0.00 0.00 0.00 4.37
2859 3092 6.090783 CACGTTATAACAGCAACTAGAGACA 58.909 40.000 15.67 0.00 0.00 3.41
2861 3094 6.752351 ACGTTATAACAGCAACTAGAGACATG 59.248 38.462 15.67 0.00 0.00 3.21
2867 3100 2.738846 AGCAACTAGAGACATGCAAACG 59.261 45.455 0.00 0.00 41.18 3.60
2883 3116 9.900710 ACATGCAAACGTTATTTATAAAACTGA 57.099 25.926 0.00 0.00 0.00 3.41
2896 3129 7.775053 TTATAAAACTGATTTTGAGGGCAGT 57.225 32.000 0.00 0.00 42.91 4.40
2983 3216 1.691976 CGAGACCTTGTATGGGCCATA 59.308 52.381 22.26 22.26 35.12 2.74
3009 3257 4.706842 TTCCTCAGAATTATACCTGGCC 57.293 45.455 0.00 0.00 0.00 5.36
3019 3267 9.295825 CAGAATTATACCTGGCCACATAAAATA 57.704 33.333 0.00 0.00 0.00 1.40
3028 3276 6.255453 CCTGGCCACATAAAATAATTTGAACG 59.745 38.462 0.00 0.00 0.00 3.95
3040 3288 9.482627 AAAATAATTTGAACGTTATTTGCCTCA 57.517 25.926 0.00 0.00 39.28 3.86
3051 3299 9.620660 AACGTTATTTGCCTCATTTTTAGTTAG 57.379 29.630 0.00 0.00 0.00 2.34
3052 3300 9.005777 ACGTTATTTGCCTCATTTTTAGTTAGA 57.994 29.630 0.00 0.00 0.00 2.10
3053 3301 9.834628 CGTTATTTGCCTCATTTTTAGTTAGAA 57.165 29.630 0.00 0.00 0.00 2.10
3064 3312 5.385509 TTTTAGTTAGAAACAGCATGGCC 57.614 39.130 0.00 0.00 43.62 5.36
3074 3322 1.916181 ACAGCATGGCCCTTAGTTAGT 59.084 47.619 0.00 0.00 43.62 2.24
3107 3355 0.431984 CGAAGCAGCACGCAATTTTG 59.568 50.000 0.00 0.00 46.13 2.44
3109 3357 2.126467 GAAGCAGCACGCAATTTTGAA 58.874 42.857 0.00 0.00 46.13 2.69
3127 3375 7.840342 TTTTGAACATGTAGCAAATGTTTGT 57.160 28.000 20.71 0.00 45.81 2.83
3148 3396 2.946329 TGCTGGTACAAATTTGTCACGT 59.054 40.909 26.46 5.31 42.35 4.49
3160 3408 1.308047 TGTCACGTGCAAGCAATTCT 58.692 45.000 11.67 0.00 0.00 2.40
3161 3409 1.675483 TGTCACGTGCAAGCAATTCTT 59.325 42.857 11.67 0.00 34.78 2.52
3162 3410 2.098934 TGTCACGTGCAAGCAATTCTTT 59.901 40.909 11.67 0.00 31.27 2.52
3163 3411 3.115554 GTCACGTGCAAGCAATTCTTTT 58.884 40.909 11.67 0.00 31.27 2.27
3164 3412 3.551485 GTCACGTGCAAGCAATTCTTTTT 59.449 39.130 11.67 0.00 31.27 1.94
3165 3413 3.551082 TCACGTGCAAGCAATTCTTTTTG 59.449 39.130 11.67 0.00 31.27 2.44
3166 3414 3.306703 CACGTGCAAGCAATTCTTTTTGT 59.693 39.130 0.82 0.00 31.27 2.83
3167 3415 3.932089 ACGTGCAAGCAATTCTTTTTGTT 59.068 34.783 0.00 0.00 31.27 2.83
3168 3416 4.391523 ACGTGCAAGCAATTCTTTTTGTTT 59.608 33.333 0.00 0.00 31.27 2.83
3169 3417 5.578727 ACGTGCAAGCAATTCTTTTTGTTTA 59.421 32.000 0.00 0.00 30.21 2.01
3170 3418 6.091441 ACGTGCAAGCAATTCTTTTTGTTTAA 59.909 30.769 0.00 0.00 30.21 1.52
3171 3419 7.125113 CGTGCAAGCAATTCTTTTTGTTTAAT 58.875 30.769 0.00 0.00 30.21 1.40
3172 3420 7.639461 CGTGCAAGCAATTCTTTTTGTTTAATT 59.361 29.630 0.00 0.00 30.21 1.40
3173 3421 8.735837 GTGCAAGCAATTCTTTTTGTTTAATTG 58.264 29.630 0.00 0.00 40.59 2.32
3174 3422 8.457261 TGCAAGCAATTCTTTTTGTTTAATTGT 58.543 25.926 0.00 0.00 40.05 2.71
3175 3423 9.288124 GCAAGCAATTCTTTTTGTTTAATTGTT 57.712 25.926 0.00 0.00 40.05 2.83
3182 3430 9.771915 ATTCTTTTTGTTTAATTGTTTGTGCTG 57.228 25.926 0.00 0.00 0.00 4.41
3183 3431 7.239972 TCTTTTTGTTTAATTGTTTGTGCTGC 58.760 30.769 0.00 0.00 0.00 5.25
3184 3432 6.734104 TTTTGTTTAATTGTTTGTGCTGCT 57.266 29.167 0.00 0.00 0.00 4.24
3185 3433 6.734104 TTTGTTTAATTGTTTGTGCTGCTT 57.266 29.167 0.00 0.00 0.00 3.91
3186 3434 7.834068 TTTGTTTAATTGTTTGTGCTGCTTA 57.166 28.000 0.00 0.00 0.00 3.09
3187 3435 8.430801 TTTGTTTAATTGTTTGTGCTGCTTAT 57.569 26.923 0.00 0.00 0.00 1.73
3188 3436 7.636259 TGTTTAATTGTTTGTGCTGCTTATC 57.364 32.000 0.00 0.00 0.00 1.75
3189 3437 7.205992 TGTTTAATTGTTTGTGCTGCTTATCA 58.794 30.769 0.00 0.00 0.00 2.15
3190 3438 7.168972 TGTTTAATTGTTTGTGCTGCTTATCAC 59.831 33.333 0.00 0.00 0.00 3.06
3191 3439 4.852134 ATTGTTTGTGCTGCTTATCACA 57.148 36.364 0.00 0.00 40.98 3.58
3192 3440 4.852134 TTGTTTGTGCTGCTTATCACAT 57.148 36.364 0.00 0.00 42.07 3.21
3193 3441 4.163458 TGTTTGTGCTGCTTATCACATG 57.837 40.909 0.00 0.00 42.07 3.21
3194 3442 3.569277 TGTTTGTGCTGCTTATCACATGT 59.431 39.130 0.00 0.00 42.07 3.21
3195 3443 3.835378 TTGTGCTGCTTATCACATGTG 57.165 42.857 20.18 20.18 42.07 3.21
3196 3444 2.781923 TGTGCTGCTTATCACATGTGT 58.218 42.857 24.63 14.61 38.18 3.72
3197 3445 2.743664 TGTGCTGCTTATCACATGTGTC 59.256 45.455 24.63 10.78 38.18 3.67
3198 3446 2.743664 GTGCTGCTTATCACATGTGTCA 59.256 45.455 24.63 11.42 33.63 3.58
3199 3447 2.743664 TGCTGCTTATCACATGTGTCAC 59.256 45.455 24.63 11.82 0.00 3.67
3200 3448 2.743664 GCTGCTTATCACATGTGTCACA 59.256 45.455 24.63 8.40 0.00 3.58
3201 3449 3.376234 GCTGCTTATCACATGTGTCACAT 59.624 43.478 24.63 12.87 39.91 3.21
3210 3458 1.438651 ATGTGTCACATGGTACGTGC 58.561 50.000 17.74 0.00 37.45 5.34
3211 3459 0.105039 TGTGTCACATGGTACGTGCA 59.895 50.000 5.86 0.00 34.27 4.57
3212 3460 1.222300 GTGTCACATGGTACGTGCAA 58.778 50.000 5.86 0.00 34.27 4.08
3213 3461 1.070175 GTGTCACATGGTACGTGCAAC 60.070 52.381 5.86 0.00 34.27 4.17
3214 3462 0.515564 GTCACATGGTACGTGCAACC 59.484 55.000 5.86 2.05 37.53 3.77
3220 3468 1.968704 TGGTACGTGCAACCAATTCA 58.031 45.000 6.27 0.00 43.99 2.57
3221 3469 2.509569 TGGTACGTGCAACCAATTCAT 58.490 42.857 6.27 0.00 43.99 2.57
3222 3470 3.676093 TGGTACGTGCAACCAATTCATA 58.324 40.909 6.27 0.00 43.99 2.15
3223 3471 4.265893 TGGTACGTGCAACCAATTCATAT 58.734 39.130 6.27 0.00 43.99 1.78
3224 3472 4.334203 TGGTACGTGCAACCAATTCATATC 59.666 41.667 6.27 0.00 43.99 1.63
3225 3473 4.334203 GGTACGTGCAACCAATTCATATCA 59.666 41.667 5.86 0.00 36.96 2.15
3226 3474 5.008613 GGTACGTGCAACCAATTCATATCAT 59.991 40.000 5.86 0.00 36.96 2.45
3227 3475 6.203915 GGTACGTGCAACCAATTCATATCATA 59.796 38.462 5.86 0.00 36.96 2.15
3228 3476 6.691754 ACGTGCAACCAATTCATATCATAA 57.308 33.333 0.00 0.00 0.00 1.90
3229 3477 7.094508 ACGTGCAACCAATTCATATCATAAA 57.905 32.000 0.00 0.00 0.00 1.40
3230 3478 7.542890 ACGTGCAACCAATTCATATCATAAAA 58.457 30.769 0.00 0.00 0.00 1.52
3231 3479 8.031864 ACGTGCAACCAATTCATATCATAAAAA 58.968 29.630 0.00 0.00 0.00 1.94
3232 3480 8.320295 CGTGCAACCAATTCATATCATAAAAAC 58.680 33.333 0.00 0.00 0.00 2.43
3233 3481 9.369904 GTGCAACCAATTCATATCATAAAAACT 57.630 29.630 0.00 0.00 0.00 2.66
3234 3482 9.368674 TGCAACCAATTCATATCATAAAAACTG 57.631 29.630 0.00 0.00 0.00 3.16
3235 3483 8.330302 GCAACCAATTCATATCATAAAAACTGC 58.670 33.333 0.00 0.00 0.00 4.40
3236 3484 9.368674 CAACCAATTCATATCATAAAAACTGCA 57.631 29.630 0.00 0.00 0.00 4.41
3237 3485 9.941325 AACCAATTCATATCATAAAAACTGCAA 57.059 25.926 0.00 0.00 0.00 4.08
3238 3486 9.941325 ACCAATTCATATCATAAAAACTGCAAA 57.059 25.926 0.00 0.00 0.00 3.68
3248 3496 9.941325 ATCATAAAAACTGCAAATAACAATGGA 57.059 25.926 0.00 0.00 0.00 3.41
3249 3497 9.421806 TCATAAAAACTGCAAATAACAATGGAG 57.578 29.630 0.00 0.00 40.42 3.86
3250 3498 6.544038 AAAAACTGCAAATAACAATGGAGC 57.456 33.333 0.00 0.00 38.42 4.70
3251 3499 3.874392 ACTGCAAATAACAATGGAGCC 57.126 42.857 0.00 0.00 38.42 4.70
3252 3500 2.164219 ACTGCAAATAACAATGGAGCCG 59.836 45.455 0.00 0.00 38.42 5.52
3253 3501 1.135141 TGCAAATAACAATGGAGCCGC 60.135 47.619 0.00 0.00 0.00 6.53
3254 3502 1.135141 GCAAATAACAATGGAGCCGCA 60.135 47.619 0.00 0.00 0.00 5.69
3255 3503 2.529151 CAAATAACAATGGAGCCGCAC 58.471 47.619 0.00 0.00 0.00 5.34
3256 3504 1.102978 AATAACAATGGAGCCGCACC 58.897 50.000 0.00 0.00 0.00 5.01
3257 3505 0.751643 ATAACAATGGAGCCGCACCC 60.752 55.000 4.22 0.00 0.00 4.61
3258 3506 2.130821 TAACAATGGAGCCGCACCCA 62.131 55.000 4.22 5.71 36.79 4.51
3259 3507 3.443045 CAATGGAGCCGCACCCAC 61.443 66.667 4.22 0.00 34.92 4.61
3264 3512 4.980805 GAGCCGCACCCACGTTCA 62.981 66.667 0.00 0.00 0.00 3.18
3265 3513 4.555709 AGCCGCACCCACGTTCAA 62.556 61.111 0.00 0.00 0.00 2.69
3266 3514 3.587933 GCCGCACCCACGTTCAAA 61.588 61.111 0.00 0.00 0.00 2.69
3267 3515 3.111939 CCGCACCCACGTTCAAAA 58.888 55.556 0.00 0.00 0.00 2.44
3268 3516 1.298788 CCGCACCCACGTTCAAAAC 60.299 57.895 0.00 0.00 0.00 2.43
3269 3517 1.429825 CGCACCCACGTTCAAAACA 59.570 52.632 0.00 0.00 0.00 2.83
3270 3518 0.179161 CGCACCCACGTTCAAAACAA 60.179 50.000 0.00 0.00 0.00 2.83
3271 3519 1.732732 CGCACCCACGTTCAAAACAAA 60.733 47.619 0.00 0.00 0.00 2.83
3272 3520 2.338500 GCACCCACGTTCAAAACAAAA 58.662 42.857 0.00 0.00 0.00 2.44
3273 3521 2.737252 GCACCCACGTTCAAAACAAAAA 59.263 40.909 0.00 0.00 0.00 1.94
3274 3522 3.372514 GCACCCACGTTCAAAACAAAAAT 59.627 39.130 0.00 0.00 0.00 1.82
3275 3523 4.142795 GCACCCACGTTCAAAACAAAAATT 60.143 37.500 0.00 0.00 0.00 1.82
3276 3524 5.319931 CACCCACGTTCAAAACAAAAATTG 58.680 37.500 0.00 0.00 0.00 2.32
3277 3525 4.142795 ACCCACGTTCAAAACAAAAATTGC 60.143 37.500 0.00 0.00 0.00 3.56
3278 3526 4.094146 CCCACGTTCAAAACAAAAATTGCT 59.906 37.500 0.00 0.00 0.00 3.91
3279 3527 5.254842 CCACGTTCAAAACAAAAATTGCTC 58.745 37.500 0.00 0.00 0.00 4.26
3280 3528 5.254842 CACGTTCAAAACAAAAATTGCTCC 58.745 37.500 0.00 0.00 0.00 4.70
3281 3529 4.331443 ACGTTCAAAACAAAAATTGCTCCC 59.669 37.500 0.00 0.00 0.00 4.30
3282 3530 4.570369 CGTTCAAAACAAAAATTGCTCCCT 59.430 37.500 0.00 0.00 0.00 4.20
3283 3531 5.064579 CGTTCAAAACAAAAATTGCTCCCTT 59.935 36.000 0.00 0.00 0.00 3.95
3284 3532 6.486248 GTTCAAAACAAAAATTGCTCCCTTC 58.514 36.000 0.00 0.00 0.00 3.46
3285 3533 4.808364 TCAAAACAAAAATTGCTCCCTTCG 59.192 37.500 0.00 0.00 0.00 3.79
3286 3534 4.400529 AAACAAAAATTGCTCCCTTCGT 57.599 36.364 0.00 0.00 0.00 3.85
3287 3535 3.369546 ACAAAAATTGCTCCCTTCGTG 57.630 42.857 0.00 0.00 0.00 4.35
3288 3536 2.061028 CAAAAATTGCTCCCTTCGTGC 58.939 47.619 0.00 0.00 0.00 5.34
3289 3537 1.327303 AAAATTGCTCCCTTCGTGCA 58.673 45.000 0.00 0.00 39.15 4.57
3291 3539 4.063529 TTGCTCCCTTCGTGCAAG 57.936 55.556 0.00 0.00 43.98 4.01
3292 3540 1.449782 TTGCTCCCTTCGTGCAAGA 59.550 52.632 0.00 0.00 43.98 3.02
3293 3541 0.884704 TTGCTCCCTTCGTGCAAGAC 60.885 55.000 0.40 0.00 43.98 3.01
3307 3555 1.919918 CAAGACGTTTTTGCAAGCCA 58.080 45.000 0.00 0.00 0.00 4.75
3308 3556 1.587946 CAAGACGTTTTTGCAAGCCAC 59.412 47.619 0.00 0.00 0.00 5.01
3309 3557 0.102300 AGACGTTTTTGCAAGCCACC 59.898 50.000 0.00 0.00 0.00 4.61
3310 3558 0.179124 GACGTTTTTGCAAGCCACCA 60.179 50.000 0.00 0.00 0.00 4.17
3311 3559 0.463620 ACGTTTTTGCAAGCCACCAT 59.536 45.000 0.00 0.00 0.00 3.55
3312 3560 1.683917 ACGTTTTTGCAAGCCACCATA 59.316 42.857 0.00 0.00 0.00 2.74
3313 3561 2.288152 ACGTTTTTGCAAGCCACCATAG 60.288 45.455 0.00 0.00 0.00 2.23
3314 3562 2.068519 GTTTTTGCAAGCCACCATAGC 58.931 47.619 0.00 0.00 0.00 2.97
3315 3563 0.243365 TTTTGCAAGCCACCATAGCG 59.757 50.000 0.00 0.00 34.64 4.26
3316 3564 2.211619 TTTGCAAGCCACCATAGCGC 62.212 55.000 0.00 0.00 34.64 5.92
3317 3565 3.133464 GCAAGCCACCATAGCGCA 61.133 61.111 11.47 0.00 34.64 6.09
3318 3566 2.699768 GCAAGCCACCATAGCGCAA 61.700 57.895 11.47 0.00 34.64 4.85
3319 3567 1.137404 CAAGCCACCATAGCGCAAC 59.863 57.895 11.47 0.00 34.64 4.17
3320 3568 1.303236 AAGCCACCATAGCGCAACA 60.303 52.632 11.47 0.00 34.64 3.33
3321 3569 1.586154 AAGCCACCATAGCGCAACAC 61.586 55.000 11.47 0.00 34.64 3.32
3323 3571 2.032634 CCACCATAGCGCAACACGT 61.033 57.895 11.47 0.00 46.11 4.49
3324 3572 1.573829 CCACCATAGCGCAACACGTT 61.574 55.000 11.47 0.00 46.11 3.99
3325 3573 0.179225 CACCATAGCGCAACACGTTC 60.179 55.000 11.47 0.00 46.11 3.95
3326 3574 0.601576 ACCATAGCGCAACACGTTCA 60.602 50.000 11.47 0.00 46.11 3.18
3327 3575 0.515127 CCATAGCGCAACACGTTCAA 59.485 50.000 11.47 0.00 46.11 2.69
3328 3576 1.069568 CCATAGCGCAACACGTTCAAA 60.070 47.619 11.47 0.00 46.11 2.69
3329 3577 2.603412 CCATAGCGCAACACGTTCAAAA 60.603 45.455 11.47 0.00 46.11 2.44
3330 3578 2.376915 TAGCGCAACACGTTCAAAAG 57.623 45.000 11.47 0.00 46.11 2.27
3331 3579 0.450184 AGCGCAACACGTTCAAAAGT 59.550 45.000 11.47 0.00 46.11 2.66
3332 3580 1.135517 AGCGCAACACGTTCAAAAGTT 60.136 42.857 11.47 0.00 46.11 2.66
3333 3581 2.096174 AGCGCAACACGTTCAAAAGTTA 59.904 40.909 11.47 0.00 46.11 2.24
3334 3582 2.847133 GCGCAACACGTTCAAAAGTTAA 59.153 40.909 0.30 0.00 46.11 2.01
3335 3583 3.301116 GCGCAACACGTTCAAAAGTTAAA 59.699 39.130 0.30 0.00 46.11 1.52
3336 3584 4.201504 GCGCAACACGTTCAAAAGTTAAAA 60.202 37.500 0.30 0.00 46.11 1.52
3337 3585 5.665701 GCGCAACACGTTCAAAAGTTAAAAA 60.666 36.000 0.30 0.00 46.11 1.94
3338 3586 5.719889 CGCAACACGTTCAAAAGTTAAAAAC 59.280 36.000 0.00 0.00 36.87 2.43
3339 3587 6.399144 CGCAACACGTTCAAAAGTTAAAAACT 60.399 34.615 0.00 0.00 39.41 2.66
3340 3588 7.201249 CGCAACACGTTCAAAAGTTAAAAACTA 60.201 33.333 0.00 0.00 37.66 2.24
3341 3589 8.426251 GCAACACGTTCAAAAGTTAAAAACTAA 58.574 29.630 0.00 0.00 41.91 2.24
3342 3590 9.931710 CAACACGTTCAAAAGTTAAAAACTAAG 57.068 29.630 0.00 0.00 41.91 2.18
3343 3591 9.896263 AACACGTTCAAAAGTTAAAAACTAAGA 57.104 25.926 0.00 0.00 41.91 2.10
3344 3592 9.333497 ACACGTTCAAAAGTTAAAAACTAAGAC 57.667 29.630 0.00 0.00 41.91 3.01
3345 3593 8.509923 CACGTTCAAAAGTTAAAAACTAAGACG 58.490 33.333 0.00 0.00 41.91 4.18
3346 3594 8.229811 ACGTTCAAAAGTTAAAAACTAAGACGT 58.770 29.630 0.00 0.00 41.91 4.34
3347 3595 9.054191 CGTTCAAAAGTTAAAAACTAAGACGTT 57.946 29.630 0.00 0.00 41.91 3.99
3384 3632 7.575414 TTTTGAACACAACACATATGTAGGT 57.425 32.000 8.32 4.30 38.45 3.08
3385 3633 7.575414 TTTGAACACAACACATATGTAGGTT 57.425 32.000 8.32 6.89 38.45 3.50
3386 3634 7.575414 TTGAACACAACACATATGTAGGTTT 57.425 32.000 8.32 4.93 38.45 3.27
3387 3635 6.964908 TGAACACAACACATATGTAGGTTTG 58.035 36.000 8.32 11.55 38.45 2.93
3388 3636 5.371115 ACACAACACATATGTAGGTTTGC 57.629 39.130 8.32 0.00 38.45 3.68
3389 3637 5.070001 ACACAACACATATGTAGGTTTGCT 58.930 37.500 8.32 0.00 38.45 3.91
3390 3638 6.234920 ACACAACACATATGTAGGTTTGCTA 58.765 36.000 8.32 0.00 38.45 3.49
3391 3639 6.712998 ACACAACACATATGTAGGTTTGCTAA 59.287 34.615 8.32 0.00 38.45 3.09
3392 3640 7.229707 ACACAACACATATGTAGGTTTGCTAAA 59.770 33.333 8.32 0.00 38.45 1.85
3393 3641 8.079203 CACAACACATATGTAGGTTTGCTAAAA 58.921 33.333 8.32 0.00 38.45 1.52
3394 3642 8.802267 ACAACACATATGTAGGTTTGCTAAAAT 58.198 29.630 8.32 0.00 38.45 1.82
3395 3643 9.289303 CAACACATATGTAGGTTTGCTAAAATC 57.711 33.333 8.32 0.00 38.45 2.17
3396 3644 8.574251 ACACATATGTAGGTTTGCTAAAATCA 57.426 30.769 8.32 0.00 37.26 2.57
3397 3645 8.677300 ACACATATGTAGGTTTGCTAAAATCAG 58.323 33.333 8.32 0.00 37.26 2.90
3398 3646 7.645340 CACATATGTAGGTTTGCTAAAATCAGC 59.355 37.037 8.32 0.00 42.15 4.26
3399 3647 7.557719 ACATATGTAGGTTTGCTAAAATCAGCT 59.442 33.333 6.56 0.00 42.30 4.24
3400 3648 5.880054 TGTAGGTTTGCTAAAATCAGCTC 57.120 39.130 0.00 0.00 42.30 4.09
3401 3649 4.391830 TGTAGGTTTGCTAAAATCAGCTCG 59.608 41.667 0.00 0.00 42.30 5.03
3402 3650 3.674997 AGGTTTGCTAAAATCAGCTCGA 58.325 40.909 0.00 0.00 42.30 4.04
3403 3651 3.686726 AGGTTTGCTAAAATCAGCTCGAG 59.313 43.478 8.45 8.45 42.30 4.04
3404 3652 3.420828 GTTTGCTAAAATCAGCTCGAGC 58.579 45.455 30.01 30.01 42.30 5.03
3419 3667 5.667978 GCTCGAGCGTATTATAACTAAGC 57.332 43.478 23.61 0.00 0.00 3.09
3420 3668 4.260194 GCTCGAGCGTATTATAACTAAGCG 59.740 45.833 23.61 0.00 0.00 4.68
3421 3669 5.348418 TCGAGCGTATTATAACTAAGCGT 57.652 39.130 0.00 0.00 0.00 5.07
3422 3670 6.466308 TCGAGCGTATTATAACTAAGCGTA 57.534 37.500 0.00 0.00 0.00 4.42
3423 3671 7.065216 TCGAGCGTATTATAACTAAGCGTAT 57.935 36.000 0.00 0.00 0.00 3.06
3424 3672 7.521529 TCGAGCGTATTATAACTAAGCGTATT 58.478 34.615 0.00 0.00 0.00 1.89
3425 3673 8.655970 TCGAGCGTATTATAACTAAGCGTATTA 58.344 33.333 0.00 0.00 0.00 0.98
3426 3674 9.430838 CGAGCGTATTATAACTAAGCGTATTAT 57.569 33.333 0.00 0.00 0.00 1.28
3437 3685 7.870588 ACTAAGCGTATTATAACTAAGCAGC 57.129 36.000 11.92 0.00 0.00 5.25
3438 3686 5.824243 AAGCGTATTATAACTAAGCAGCG 57.176 39.130 11.92 0.00 0.00 5.18
3439 3687 4.868067 AGCGTATTATAACTAAGCAGCGT 58.132 39.130 11.92 0.00 0.00 5.07
3440 3688 6.005583 AGCGTATTATAACTAAGCAGCGTA 57.994 37.500 11.92 0.00 0.00 4.42
3441 3689 6.618811 AGCGTATTATAACTAAGCAGCGTAT 58.381 36.000 11.92 0.00 0.00 3.06
3442 3690 7.088905 AGCGTATTATAACTAAGCAGCGTATT 58.911 34.615 11.92 0.00 0.00 1.89
3443 3691 8.239314 AGCGTATTATAACTAAGCAGCGTATTA 58.761 33.333 11.92 0.00 0.00 0.98
3444 3692 9.017669 GCGTATTATAACTAAGCAGCGTATTAT 57.982 33.333 0.00 0.00 0.00 1.28
3452 3700 7.870588 ACTAAGCAGCGTATTATAACTAAGC 57.129 36.000 0.00 0.00 0.00 3.09
3453 3701 5.824243 AAGCAGCGTATTATAACTAAGCG 57.176 39.130 0.00 0.00 0.00 4.68
3454 3702 4.868067 AGCAGCGTATTATAACTAAGCGT 58.132 39.130 0.00 0.00 0.00 5.07
3455 3703 6.005583 AGCAGCGTATTATAACTAAGCGTA 57.994 37.500 0.00 0.00 0.00 4.42
3456 3704 5.855395 AGCAGCGTATTATAACTAAGCGTAC 59.145 40.000 0.00 0.00 0.00 3.67
3457 3705 5.219731 GCAGCGTATTATAACTAAGCGTACG 60.220 44.000 11.84 11.84 37.20 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.103330 TGTTCATCATGCATTTGAGAAATGG 58.897 36.000 0.00 0.00 46.47 3.16
162 166 9.841295 GTTCCCAATAATATGTTAGTGACCTTA 57.159 33.333 10.74 0.00 37.94 2.69
167 171 7.557724 TCACGTTCCCAATAATATGTTAGTGA 58.442 34.615 10.74 2.75 37.94 3.41
171 175 7.236674 CGTTCACGTTCCCAATAATATGTTA 57.763 36.000 0.00 0.00 34.11 2.41
380 397 9.677567 GTGCTTAAAAATTTGTGACATCTAGAA 57.322 29.630 0.00 0.00 0.00 2.10
381 398 8.015087 CGTGCTTAAAAATTTGTGACATCTAGA 58.985 33.333 0.00 0.00 0.00 2.43
382 399 7.803189 ACGTGCTTAAAAATTTGTGACATCTAG 59.197 33.333 0.00 0.00 0.00 2.43
383 400 7.589587 CACGTGCTTAAAAATTTGTGACATCTA 59.410 33.333 0.82 0.00 0.00 1.98
384 401 6.417635 CACGTGCTTAAAAATTTGTGACATCT 59.582 34.615 0.82 0.00 0.00 2.90
385 402 6.416455 TCACGTGCTTAAAAATTTGTGACATC 59.584 34.615 11.67 0.00 30.82 3.06
386 403 6.269315 TCACGTGCTTAAAAATTTGTGACAT 58.731 32.000 11.67 0.00 30.82 3.06
387 404 5.641709 TCACGTGCTTAAAAATTTGTGACA 58.358 33.333 11.67 0.00 30.82 3.58
388 405 6.399626 GTTCACGTGCTTAAAAATTTGTGAC 58.600 36.000 11.67 0.00 35.10 3.67
389 406 5.517054 GGTTCACGTGCTTAAAAATTTGTGA 59.483 36.000 11.67 0.00 33.68 3.58
390 407 5.518487 AGGTTCACGTGCTTAAAAATTTGTG 59.482 36.000 11.67 0.00 0.00 3.33
391 408 5.656480 AGGTTCACGTGCTTAAAAATTTGT 58.344 33.333 11.67 0.00 0.00 2.83
392 409 6.582437 AAGGTTCACGTGCTTAAAAATTTG 57.418 33.333 11.67 0.00 0.00 2.32
393 410 7.039270 AGAAAGGTTCACGTGCTTAAAAATTT 58.961 30.769 11.67 4.64 0.00 1.82
394 411 6.569780 AGAAAGGTTCACGTGCTTAAAAATT 58.430 32.000 11.67 0.00 0.00 1.82
395 412 6.144078 AGAAAGGTTCACGTGCTTAAAAAT 57.856 33.333 11.67 0.00 0.00 1.82
396 413 5.570234 AGAAAGGTTCACGTGCTTAAAAA 57.430 34.783 11.67 0.00 0.00 1.94
403 420 4.226761 CCATTAAAGAAAGGTTCACGTGC 58.773 43.478 11.67 0.00 0.00 5.34
558 597 1.715862 TAAGCGCGCACACCAACAAA 61.716 50.000 35.10 2.27 0.00 2.83
559 598 1.511318 ATAAGCGCGCACACCAACAA 61.511 50.000 35.10 7.30 0.00 2.83
560 599 1.963855 ATAAGCGCGCACACCAACA 60.964 52.632 35.10 8.62 0.00 3.33
561 600 1.511887 CATAAGCGCGCACACCAAC 60.512 57.895 35.10 0.00 0.00 3.77
565 604 3.095898 GACCCATAAGCGCGCACAC 62.096 63.158 35.10 11.21 0.00 3.82
582 621 3.380004 CGGTGCTATTTAAATTGGCCAGA 59.620 43.478 5.11 0.00 0.00 3.86
604 645 1.298638 GGTACGTACCGTCGCATCC 60.299 63.158 28.00 3.08 41.54 3.51
674 715 3.190874 CATCTCGAGGGCTTGAGTAAAC 58.809 50.000 13.56 0.00 40.99 2.01
710 751 2.150218 CACCGAATCGTCGTGTCCG 61.150 63.158 0.82 0.00 46.21 4.79
860 901 1.417145 GGTTACAGTGTGTGTGGGGTA 59.583 52.381 5.88 0.00 40.69 3.69
863 904 1.872237 CGAGGTTACAGTGTGTGTGGG 60.872 57.143 5.88 0.00 40.69 4.61
866 907 1.117150 ACCGAGGTTACAGTGTGTGT 58.883 50.000 5.88 0.00 43.86 3.72
893 937 3.426568 GTGGAGTGCTGCTTCCGC 61.427 66.667 17.13 17.13 0.00 5.54
894 938 2.031012 TGTGGAGTGCTGCTTCCG 59.969 61.111 15.55 0.00 0.00 4.30
895 939 2.331132 GCTGTGGAGTGCTGCTTCC 61.331 63.158 14.29 14.29 0.00 3.46
896 940 0.888285 AAGCTGTGGAGTGCTGCTTC 60.888 55.000 0.00 0.00 44.07 3.86
897 941 1.150081 AAGCTGTGGAGTGCTGCTT 59.850 52.632 0.00 0.00 43.14 3.91
898 942 1.600076 CAAGCTGTGGAGTGCTGCT 60.600 57.895 0.00 0.00 41.72 4.24
928 972 0.528684 GAGCGGAATCGTGGAGAAGG 60.529 60.000 0.00 0.00 38.89 3.46
1091 1138 4.351938 TGTCGTGGTCGCCCTTCG 62.352 66.667 0.00 0.00 40.15 3.79
1131 1178 1.303317 ATCCGTCCTGTTTGCACCC 60.303 57.895 0.00 0.00 0.00 4.61
1134 1181 1.303236 CCCATCCGTCCTGTTTGCA 60.303 57.895 0.00 0.00 0.00 4.08
1137 1184 0.680921 CATGCCCATCCGTCCTGTTT 60.681 55.000 0.00 0.00 0.00 2.83
1294 1341 2.539688 CAGATGTATGTATGCGTTGCGT 59.460 45.455 0.00 0.00 0.00 5.24
1295 1342 2.660094 GCAGATGTATGTATGCGTTGCG 60.660 50.000 0.00 0.00 0.00 4.85
1323 1370 7.776969 ACATCATAAATATGCCAGTGAAAGACT 59.223 33.333 0.00 0.00 33.76 3.24
1342 1389 7.003482 TGCTCAGCCCAATTATTAACATCATA 58.997 34.615 0.00 0.00 0.00 2.15
1356 1405 1.605992 CCAGATCTGCTCAGCCCAA 59.394 57.895 17.76 0.00 0.00 4.12
1505 1554 1.747924 GTACCCTCGTAAGTCTCCCAC 59.252 57.143 0.00 0.00 39.48 4.61
1520 1569 2.090524 GCAGCACACGTACGTACCC 61.091 63.158 22.34 11.58 0.00 3.69
1575 1627 1.463056 CGTTAAATGTCTTCTGCGCCA 59.537 47.619 4.18 0.00 0.00 5.69
1610 1664 1.299541 CACGGCATCCTACATCAACC 58.700 55.000 0.00 0.00 0.00 3.77
1655 1720 1.298157 CCAGAAACGCGATGAAGGCA 61.298 55.000 15.93 0.00 0.00 4.75
1722 1787 5.237561 TCTGAAGTCGATTCCTCTATTCGAG 59.762 44.000 0.00 0.00 39.81 4.04
1723 1788 5.123936 TCTGAAGTCGATTCCTCTATTCGA 58.876 41.667 0.00 0.00 37.58 3.71
1724 1789 5.425577 TCTGAAGTCGATTCCTCTATTCG 57.574 43.478 0.00 0.00 37.08 3.34
1725 1790 7.923344 TGATTTCTGAAGTCGATTCCTCTATTC 59.077 37.037 8.16 0.00 37.08 1.75
1726 1791 7.708752 GTGATTTCTGAAGTCGATTCCTCTATT 59.291 37.037 8.16 0.00 37.08 1.73
1727 1792 7.147828 TGTGATTTCTGAAGTCGATTCCTCTAT 60.148 37.037 8.16 0.00 37.08 1.98
1728 1793 6.152831 TGTGATTTCTGAAGTCGATTCCTCTA 59.847 38.462 8.16 0.00 37.08 2.43
1729 1794 5.047021 TGTGATTTCTGAAGTCGATTCCTCT 60.047 40.000 8.16 0.00 37.08 3.69
1730 1795 5.062809 GTGTGATTTCTGAAGTCGATTCCTC 59.937 44.000 8.16 0.00 37.08 3.71
1731 1796 4.932200 GTGTGATTTCTGAAGTCGATTCCT 59.068 41.667 8.16 0.00 37.08 3.36
1732 1797 4.093556 GGTGTGATTTCTGAAGTCGATTCC 59.906 45.833 8.16 5.01 37.08 3.01
1733 1798 4.201628 CGGTGTGATTTCTGAAGTCGATTC 60.202 45.833 8.16 0.00 38.50 2.52
1734 1799 3.679980 CGGTGTGATTTCTGAAGTCGATT 59.320 43.478 8.16 0.00 0.00 3.34
1735 1800 3.254060 CGGTGTGATTTCTGAAGTCGAT 58.746 45.455 8.16 0.00 0.00 3.59
1736 1801 2.035449 ACGGTGTGATTTCTGAAGTCGA 59.965 45.455 8.16 0.00 0.00 4.20
1737 1802 2.155732 CACGGTGTGATTTCTGAAGTCG 59.844 50.000 8.16 0.08 35.23 4.18
1738 1803 2.096218 GCACGGTGTGATTTCTGAAGTC 60.096 50.000 10.24 6.01 35.23 3.01
1766 1831 9.537852 TCTACACTCTAAAATTTGTAGGGAGTA 57.462 33.333 11.11 11.84 41.15 2.59
1768 1833 9.892130 AATCTACACTCTAAAATTTGTAGGGAG 57.108 33.333 11.11 7.56 41.15 4.30
1786 1851 6.128795 CGGAGAAAAACTGAGTGAATCTACAC 60.129 42.308 5.29 0.00 40.60 2.90
1787 1852 5.926542 CGGAGAAAAACTGAGTGAATCTACA 59.073 40.000 5.29 0.00 0.00 2.74
1788 1853 5.927115 ACGGAGAAAAACTGAGTGAATCTAC 59.073 40.000 0.00 0.00 0.00 2.59
1789 1854 6.097915 ACGGAGAAAAACTGAGTGAATCTA 57.902 37.500 0.00 0.00 0.00 1.98
1790 1855 4.962155 ACGGAGAAAAACTGAGTGAATCT 58.038 39.130 0.00 0.00 0.00 2.40
1791 1856 5.694910 TGTACGGAGAAAAACTGAGTGAATC 59.305 40.000 0.00 0.00 0.00 2.52
1792 1857 5.607477 TGTACGGAGAAAAACTGAGTGAAT 58.393 37.500 0.00 0.00 0.00 2.57
1793 1858 5.013568 TGTACGGAGAAAAACTGAGTGAA 57.986 39.130 0.00 0.00 0.00 3.18
1794 1859 4.659111 TGTACGGAGAAAAACTGAGTGA 57.341 40.909 0.00 0.00 0.00 3.41
1795 1860 5.728351 TTTGTACGGAGAAAAACTGAGTG 57.272 39.130 0.00 0.00 0.00 3.51
1796 1861 8.617290 AATATTTGTACGGAGAAAAACTGAGT 57.383 30.769 0.00 0.00 0.00 3.41
1830 1895 9.454859 CCTCTGTTCCTAAATATTTGTCTTTCT 57.545 33.333 11.05 0.00 0.00 2.52
1831 1896 8.678199 CCCTCTGTTCCTAAATATTTGTCTTTC 58.322 37.037 11.05 0.00 0.00 2.62
1832 1897 8.390921 TCCCTCTGTTCCTAAATATTTGTCTTT 58.609 33.333 11.05 0.00 0.00 2.52
1833 1898 7.928873 TCCCTCTGTTCCTAAATATTTGTCTT 58.071 34.615 11.05 0.00 0.00 3.01
1834 1899 7.182930 ACTCCCTCTGTTCCTAAATATTTGTCT 59.817 37.037 11.05 0.00 0.00 3.41
1835 1900 7.339482 ACTCCCTCTGTTCCTAAATATTTGTC 58.661 38.462 11.05 0.00 0.00 3.18
1836 1901 7.272144 ACTCCCTCTGTTCCTAAATATTTGT 57.728 36.000 11.05 0.00 0.00 2.83
1837 1902 8.487028 ACTACTCCCTCTGTTCCTAAATATTTG 58.513 37.037 11.05 1.40 0.00 2.32
1838 1903 8.625467 ACTACTCCCTCTGTTCCTAAATATTT 57.375 34.615 5.89 5.89 0.00 1.40
1839 1904 8.068733 AGACTACTCCCTCTGTTCCTAAATATT 58.931 37.037 0.00 0.00 0.00 1.28
1840 1905 7.597327 AGACTACTCCCTCTGTTCCTAAATAT 58.403 38.462 0.00 0.00 0.00 1.28
1841 1906 6.982899 AGACTACTCCCTCTGTTCCTAAATA 58.017 40.000 0.00 0.00 0.00 1.40
1842 1907 5.844601 AGACTACTCCCTCTGTTCCTAAAT 58.155 41.667 0.00 0.00 0.00 1.40
1843 1908 5.272405 AGACTACTCCCTCTGTTCCTAAA 57.728 43.478 0.00 0.00 0.00 1.85
1844 1909 4.949966 AGACTACTCCCTCTGTTCCTAA 57.050 45.455 0.00 0.00 0.00 2.69
1845 1910 4.949966 AAGACTACTCCCTCTGTTCCTA 57.050 45.455 0.00 0.00 0.00 2.94
1846 1911 3.837399 AAGACTACTCCCTCTGTTCCT 57.163 47.619 0.00 0.00 0.00 3.36
1847 1912 4.040584 ACAAAAGACTACTCCCTCTGTTCC 59.959 45.833 0.00 0.00 0.00 3.62
1848 1913 5.216614 ACAAAAGACTACTCCCTCTGTTC 57.783 43.478 0.00 0.00 0.00 3.18
1849 1914 6.936968 ATACAAAAGACTACTCCCTCTGTT 57.063 37.500 0.00 0.00 0.00 3.16
1850 1915 7.620094 ACATATACAAAAGACTACTCCCTCTGT 59.380 37.037 0.00 0.00 0.00 3.41
1851 1916 8.012957 ACATATACAAAAGACTACTCCCTCTG 57.987 38.462 0.00 0.00 0.00 3.35
1852 1917 9.884814 ATACATATACAAAAGACTACTCCCTCT 57.115 33.333 0.00 0.00 0.00 3.69
1868 1933 9.108284 CCACAAATCACAGTCAATACATATACA 57.892 33.333 0.00 0.00 0.00 2.29
1869 1934 8.070171 GCCACAAATCACAGTCAATACATATAC 58.930 37.037 0.00 0.00 0.00 1.47
1870 1935 7.992608 AGCCACAAATCACAGTCAATACATATA 59.007 33.333 0.00 0.00 0.00 0.86
1871 1936 6.830324 AGCCACAAATCACAGTCAATACATAT 59.170 34.615 0.00 0.00 0.00 1.78
1885 1952 1.180456 CCCTGCACAGCCACAAATCA 61.180 55.000 0.00 0.00 0.00 2.57
1887 1954 0.760189 AACCCTGCACAGCCACAAAT 60.760 50.000 0.00 0.00 0.00 2.32
1914 1987 3.570550 CGTAGATAGGGAAGAGAGGGTTG 59.429 52.174 0.00 0.00 0.00 3.77
1929 2002 3.517602 GTGGATGTTGTGCACGTAGATA 58.482 45.455 13.13 0.00 39.44 1.98
1977 2050 0.391263 GGCCCTCTTTGTCGTAGGTG 60.391 60.000 0.00 0.00 0.00 4.00
2038 2114 3.834013 TTCACATTCGCCGCCACCA 62.834 57.895 0.00 0.00 0.00 4.17
2061 2137 3.066064 TGAACCTGCACAACATACAACAC 59.934 43.478 0.00 0.00 0.00 3.32
2068 2144 0.604578 GGCATGAACCTGCACAACAT 59.395 50.000 0.00 0.00 44.12 2.71
2210 2286 4.976116 TCATGCTGATCGTGTAATTAGTCG 59.024 41.667 0.00 3.69 33.44 4.18
2234 2320 2.408050 CGACTGAAACTGAAGGTCCAG 58.592 52.381 0.00 0.00 39.93 3.86
2237 2323 2.156343 AGCGACTGAAACTGAAGGTC 57.844 50.000 0.00 0.00 0.00 3.85
2283 2369 3.129462 CGTATCATCTCACACCAGTCAGT 59.871 47.826 0.00 0.00 0.00 3.41
2286 2372 2.688446 TCCGTATCATCTCACACCAGTC 59.312 50.000 0.00 0.00 0.00 3.51
2301 2392 0.397941 CACCCTGCATCCATCCGTAT 59.602 55.000 0.00 0.00 0.00 3.06
2302 2393 1.695114 CCACCCTGCATCCATCCGTA 61.695 60.000 0.00 0.00 0.00 4.02
2304 2395 2.203252 CCACCCTGCATCCATCCG 60.203 66.667 0.00 0.00 0.00 4.18
2342 2439 2.184322 CGCCAGCACGTACAGGAT 59.816 61.111 0.58 0.00 0.00 3.24
2359 2456 3.443045 TACCCTTCGTCGTCCCGC 61.443 66.667 0.00 0.00 0.00 6.13
2464 2561 2.515926 GCGATGAGCCTGTGATCTAA 57.484 50.000 0.00 0.00 40.81 2.10
2476 2573 3.138930 ATCCACCGTCGGCGATGAG 62.139 63.158 29.34 20.54 41.33 2.90
2478 2575 2.658593 GATCCACCGTCGGCGATG 60.659 66.667 21.74 21.74 41.33 3.84
2479 2576 2.833582 AGATCCACCGTCGGCGAT 60.834 61.111 12.93 12.67 41.33 4.58
2480 2577 3.515286 GAGATCCACCGTCGGCGA 61.515 66.667 12.93 4.99 41.33 5.54
2483 2580 3.758088 CTGCGAGATCCACCGTCGG 62.758 68.421 10.48 10.48 34.23 4.79
2518 2615 1.237285 ACACGGAAAGCATCACAGGC 61.237 55.000 0.00 0.00 0.00 4.85
2546 2643 2.439135 TGTGGCCTGCTGTACATCATAT 59.561 45.455 3.32 0.00 0.00 1.78
2548 2645 0.620030 TGTGGCCTGCTGTACATCAT 59.380 50.000 3.32 0.00 0.00 2.45
2582 2679 1.077357 TTTTCACCACACCAGCGGT 60.077 52.632 0.00 0.00 35.62 5.68
2623 2726 2.340337 GGGCTGAACATTCAAACATGC 58.660 47.619 0.00 0.00 36.64 4.06
2671 2778 2.764547 GGGGGAAGAGAGGGTCGG 60.765 72.222 0.00 0.00 0.00 4.79
2672 2779 3.148279 CGGGGGAAGAGAGGGTCG 61.148 72.222 0.00 0.00 0.00 4.79
2673 2780 2.764547 CCGGGGGAAGAGAGGGTC 60.765 72.222 0.00 0.00 0.00 4.46
2695 2806 3.918220 CTCTGCAATCGACGCGCC 61.918 66.667 5.73 0.00 0.00 6.53
2712 2879 1.001597 CTCCACGCCGGTCTTATCTAC 60.002 57.143 1.90 0.00 35.57 2.59
2741 2915 2.202690 TAATCCTCACACGCGGCG 60.203 61.111 22.36 22.36 0.00 6.46
2745 2919 1.871080 CCATCCTAATCCTCACACGC 58.129 55.000 0.00 0.00 0.00 5.34
2747 2921 3.209410 CTTGCCATCCTAATCCTCACAC 58.791 50.000 0.00 0.00 0.00 3.82
2748 2922 2.173356 CCTTGCCATCCTAATCCTCACA 59.827 50.000 0.00 0.00 0.00 3.58
2749 2923 2.487986 CCCTTGCCATCCTAATCCTCAC 60.488 54.545 0.00 0.00 0.00 3.51
2750 2924 1.776667 CCCTTGCCATCCTAATCCTCA 59.223 52.381 0.00 0.00 0.00 3.86
2757 2931 2.690881 ACCGCCCTTGCCATCCTA 60.691 61.111 0.00 0.00 0.00 2.94
2788 2962 1.274728 GATCCGGATCCTCATGACCTG 59.725 57.143 30.80 0.00 31.76 4.00
2794 2968 1.638529 GGACTGATCCGGATCCTCAT 58.361 55.000 35.72 21.04 37.02 2.90
2813 2993 2.418628 GGACCACGTAACCATTGTGATG 59.581 50.000 0.00 0.00 35.66 3.07
2814 2994 2.617021 GGGACCACGTAACCATTGTGAT 60.617 50.000 0.00 0.00 35.66 3.06
2833 3043 4.751060 TCTAGTTGCTGTTATAACGTGGG 58.249 43.478 10.92 2.93 32.24 4.61
2834 3044 5.515626 GTCTCTAGTTGCTGTTATAACGTGG 59.484 44.000 10.92 5.16 32.24 4.94
2836 3046 6.263516 TGTCTCTAGTTGCTGTTATAACGT 57.736 37.500 10.92 0.00 32.24 3.99
2838 3048 6.535150 TGCATGTCTCTAGTTGCTGTTATAAC 59.465 38.462 8.75 8.75 36.10 1.89
2839 3049 6.639563 TGCATGTCTCTAGTTGCTGTTATAA 58.360 36.000 0.00 0.00 36.10 0.98
2840 3050 6.220726 TGCATGTCTCTAGTTGCTGTTATA 57.779 37.500 0.00 0.00 36.10 0.98
2841 3051 5.089970 TGCATGTCTCTAGTTGCTGTTAT 57.910 39.130 0.00 0.00 36.10 1.89
2842 3052 4.535526 TGCATGTCTCTAGTTGCTGTTA 57.464 40.909 0.00 0.00 36.10 2.41
2845 3055 3.424039 CGTTTGCATGTCTCTAGTTGCTG 60.424 47.826 0.00 0.00 36.10 4.41
2847 3057 2.480419 ACGTTTGCATGTCTCTAGTTGC 59.520 45.455 0.00 0.00 35.67 4.17
2877 3110 3.299503 ACACTGCCCTCAAAATCAGTTT 58.700 40.909 0.00 0.00 37.66 2.66
2881 3114 2.224744 TGCTACACTGCCCTCAAAATCA 60.225 45.455 0.00 0.00 0.00 2.57
2882 3115 2.436417 TGCTACACTGCCCTCAAAATC 58.564 47.619 0.00 0.00 0.00 2.17
2883 3116 2.558359 GTTGCTACACTGCCCTCAAAAT 59.442 45.455 0.00 0.00 0.00 1.82
2889 3122 0.250901 CCTTGTTGCTACACTGCCCT 60.251 55.000 0.00 0.00 32.98 5.19
2891 3124 1.581447 GCCTTGTTGCTACACTGCC 59.419 57.895 0.00 0.00 32.98 4.85
2892 3125 0.890996 AGGCCTTGTTGCTACACTGC 60.891 55.000 0.00 6.58 32.98 4.40
2893 3126 2.472695 TAGGCCTTGTTGCTACACTG 57.527 50.000 12.58 0.00 32.98 3.66
2895 3128 3.312697 GCTAATAGGCCTTGTTGCTACAC 59.687 47.826 12.58 0.00 32.98 2.90
2896 3129 3.199946 AGCTAATAGGCCTTGTTGCTACA 59.800 43.478 12.58 0.00 0.00 2.74
3002 3250 6.865834 TCAAATTATTTTATGTGGCCAGGT 57.134 33.333 5.11 0.00 0.00 4.00
3019 3267 7.961325 AAATGAGGCAAATAACGTTCAAATT 57.039 28.000 2.82 0.00 0.00 1.82
3024 3272 8.515473 AACTAAAAATGAGGCAAATAACGTTC 57.485 30.769 2.82 0.00 0.00 3.95
3037 3285 7.274250 GCCATGCTGTTTCTAACTAAAAATGAG 59.726 37.037 0.00 0.00 0.00 2.90
3039 3287 6.311200 GGCCATGCTGTTTCTAACTAAAAATG 59.689 38.462 0.00 0.00 0.00 2.32
3040 3288 6.398095 GGCCATGCTGTTTCTAACTAAAAAT 58.602 36.000 0.00 0.00 0.00 1.82
3051 3299 1.839424 ACTAAGGGCCATGCTGTTTC 58.161 50.000 6.18 0.00 0.00 2.78
3052 3300 2.309136 AACTAAGGGCCATGCTGTTT 57.691 45.000 6.18 0.00 0.00 2.83
3053 3301 2.308866 ACTAACTAAGGGCCATGCTGTT 59.691 45.455 6.18 6.62 0.00 3.16
3074 3322 6.739100 CGTGCTGCTTCGTAATAATTTGTTTA 59.261 34.615 0.00 0.00 0.00 2.01
3088 3336 0.431984 CAAAATTGCGTGCTGCTTCG 59.568 50.000 0.00 7.30 46.63 3.79
3107 3355 5.254669 GCACAAACATTTGCTACATGTTC 57.745 39.130 2.30 0.00 42.80 3.18
3127 3375 2.946329 ACGTGACAAATTTGTACCAGCA 59.054 40.909 23.33 13.77 42.43 4.41
3132 3380 3.179599 GCTTGCACGTGACAAATTTGTAC 59.820 43.478 23.33 18.39 42.43 2.90
3148 3396 8.457261 ACAATTAAACAAAAAGAATTGCTTGCA 58.543 25.926 6.19 0.00 41.08 4.08
3160 3408 7.138692 AGCAGCACAAACAATTAAACAAAAA 57.861 28.000 0.00 0.00 0.00 1.94
3161 3409 6.734104 AGCAGCACAAACAATTAAACAAAA 57.266 29.167 0.00 0.00 0.00 2.44
3162 3410 6.734104 AAGCAGCACAAACAATTAAACAAA 57.266 29.167 0.00 0.00 0.00 2.83
3163 3411 7.708322 TGATAAGCAGCACAAACAATTAAACAA 59.292 29.630 0.00 0.00 0.00 2.83
3164 3412 7.168972 GTGATAAGCAGCACAAACAATTAAACA 59.831 33.333 0.00 0.00 40.85 2.83
3165 3413 7.501515 GTGATAAGCAGCACAAACAATTAAAC 58.498 34.615 0.00 0.00 40.85 2.01
3166 3414 7.636259 GTGATAAGCAGCACAAACAATTAAA 57.364 32.000 0.00 0.00 40.85 1.52
3177 3425 2.743664 TGACACATGTGATAAGCAGCAC 59.256 45.455 31.94 9.69 41.55 4.40
3178 3426 2.743664 GTGACACATGTGATAAGCAGCA 59.256 45.455 31.94 12.55 0.00 4.41
3179 3427 2.743664 TGTGACACATGTGATAAGCAGC 59.256 45.455 31.94 12.39 0.00 5.25
3191 3439 1.270571 TGCACGTACCATGTGACACAT 60.271 47.619 15.48 15.48 39.91 3.21
3192 3440 0.105039 TGCACGTACCATGTGACACA 59.895 50.000 11.41 11.41 37.29 3.72
3193 3441 1.070175 GTTGCACGTACCATGTGACAC 60.070 52.381 0.00 0.00 37.29 3.67
3194 3442 1.222300 GTTGCACGTACCATGTGACA 58.778 50.000 2.74 0.00 37.29 3.58
3195 3443 0.515564 GGTTGCACGTACCATGTGAC 59.484 55.000 0.98 0.00 37.29 3.67
3196 3444 0.106894 TGGTTGCACGTACCATGTGA 59.893 50.000 4.57 0.00 40.65 3.58
3197 3445 0.947960 TTGGTTGCACGTACCATGTG 59.052 50.000 9.52 0.00 44.70 3.21
3198 3446 1.904287 ATTGGTTGCACGTACCATGT 58.096 45.000 9.52 0.00 44.70 3.21
3199 3447 2.227626 TGAATTGGTTGCACGTACCATG 59.772 45.455 9.52 0.00 44.70 3.66
3200 3448 2.509569 TGAATTGGTTGCACGTACCAT 58.490 42.857 9.52 0.00 44.70 3.55
3201 3449 1.968704 TGAATTGGTTGCACGTACCA 58.031 45.000 4.57 4.57 43.71 3.25
3202 3450 4.334203 TGATATGAATTGGTTGCACGTACC 59.666 41.667 0.00 0.00 36.17 3.34
3203 3451 5.478233 TGATATGAATTGGTTGCACGTAC 57.522 39.130 0.00 0.00 0.00 3.67
3204 3452 7.793927 TTATGATATGAATTGGTTGCACGTA 57.206 32.000 0.00 0.00 0.00 3.57
3205 3453 6.691754 TTATGATATGAATTGGTTGCACGT 57.308 33.333 0.00 0.00 0.00 4.49
3206 3454 7.984002 TTTTATGATATGAATTGGTTGCACG 57.016 32.000 0.00 0.00 0.00 5.34
3207 3455 9.369904 AGTTTTTATGATATGAATTGGTTGCAC 57.630 29.630 0.00 0.00 0.00 4.57
3208 3456 9.368674 CAGTTTTTATGATATGAATTGGTTGCA 57.631 29.630 0.00 0.00 0.00 4.08
3209 3457 8.330302 GCAGTTTTTATGATATGAATTGGTTGC 58.670 33.333 0.00 0.00 0.00 4.17
3210 3458 9.368674 TGCAGTTTTTATGATATGAATTGGTTG 57.631 29.630 0.00 0.00 0.00 3.77
3211 3459 9.941325 TTGCAGTTTTTATGATATGAATTGGTT 57.059 25.926 0.00 0.00 0.00 3.67
3212 3460 9.941325 TTTGCAGTTTTTATGATATGAATTGGT 57.059 25.926 0.00 0.00 0.00 3.67
3222 3470 9.941325 TCCATTGTTATTTGCAGTTTTTATGAT 57.059 25.926 0.00 0.00 0.00 2.45
3223 3471 9.421806 CTCCATTGTTATTTGCAGTTTTTATGA 57.578 29.630 0.00 0.00 0.00 2.15
3224 3472 8.170553 GCTCCATTGTTATTTGCAGTTTTTATG 58.829 33.333 0.00 0.00 0.00 1.90
3225 3473 7.334171 GGCTCCATTGTTATTTGCAGTTTTTAT 59.666 33.333 0.00 0.00 0.00 1.40
3226 3474 6.648725 GGCTCCATTGTTATTTGCAGTTTTTA 59.351 34.615 0.00 0.00 0.00 1.52
3227 3475 5.469760 GGCTCCATTGTTATTTGCAGTTTTT 59.530 36.000 0.00 0.00 0.00 1.94
3228 3476 4.996758 GGCTCCATTGTTATTTGCAGTTTT 59.003 37.500 0.00 0.00 0.00 2.43
3229 3477 4.568956 GGCTCCATTGTTATTTGCAGTTT 58.431 39.130 0.00 0.00 0.00 2.66
3230 3478 3.367292 CGGCTCCATTGTTATTTGCAGTT 60.367 43.478 0.00 0.00 0.00 3.16
3231 3479 2.164219 CGGCTCCATTGTTATTTGCAGT 59.836 45.455 0.00 0.00 0.00 4.40
3232 3480 2.801063 CGGCTCCATTGTTATTTGCAG 58.199 47.619 0.00 0.00 0.00 4.41
3233 3481 1.135141 GCGGCTCCATTGTTATTTGCA 60.135 47.619 0.00 0.00 0.00 4.08
3234 3482 1.135141 TGCGGCTCCATTGTTATTTGC 60.135 47.619 0.00 0.00 0.00 3.68
3235 3483 2.529151 GTGCGGCTCCATTGTTATTTG 58.471 47.619 0.00 0.00 0.00 2.32
3236 3484 1.476488 GGTGCGGCTCCATTGTTATTT 59.524 47.619 15.78 0.00 0.00 1.40
3237 3485 1.102978 GGTGCGGCTCCATTGTTATT 58.897 50.000 15.78 0.00 0.00 1.40
3238 3486 0.751643 GGGTGCGGCTCCATTGTTAT 60.752 55.000 21.36 0.00 0.00 1.89
3239 3487 1.377987 GGGTGCGGCTCCATTGTTA 60.378 57.895 21.36 0.00 0.00 2.41
3240 3488 2.676471 GGGTGCGGCTCCATTGTT 60.676 61.111 21.36 0.00 0.00 2.83
3241 3489 3.965258 TGGGTGCGGCTCCATTGT 61.965 61.111 21.36 0.00 0.00 2.71
3242 3490 3.443045 GTGGGTGCGGCTCCATTG 61.443 66.667 21.36 0.00 35.28 2.82
3247 3495 4.980805 TGAACGTGGGTGCGGCTC 62.981 66.667 0.00 0.00 35.98 4.70
3248 3496 4.555709 TTGAACGTGGGTGCGGCT 62.556 61.111 0.00 0.00 35.98 5.52
3249 3497 3.127352 TTTTGAACGTGGGTGCGGC 62.127 57.895 0.00 0.00 35.98 6.53
3250 3498 1.298788 GTTTTGAACGTGGGTGCGG 60.299 57.895 0.00 0.00 35.98 5.69
3251 3499 0.179161 TTGTTTTGAACGTGGGTGCG 60.179 50.000 0.00 0.00 37.94 5.34
3252 3500 1.997669 TTTGTTTTGAACGTGGGTGC 58.002 45.000 0.00 0.00 0.00 5.01
3253 3501 5.319931 CAATTTTTGTTTTGAACGTGGGTG 58.680 37.500 0.00 0.00 0.00 4.61
3254 3502 4.142795 GCAATTTTTGTTTTGAACGTGGGT 60.143 37.500 0.00 0.00 0.00 4.51
3255 3503 4.094146 AGCAATTTTTGTTTTGAACGTGGG 59.906 37.500 0.00 0.00 0.00 4.61
3256 3504 5.215239 AGCAATTTTTGTTTTGAACGTGG 57.785 34.783 0.00 0.00 0.00 4.94
3257 3505 5.254842 GGAGCAATTTTTGTTTTGAACGTG 58.745 37.500 0.00 0.00 0.00 4.49
3258 3506 4.331443 GGGAGCAATTTTTGTTTTGAACGT 59.669 37.500 0.00 0.00 0.00 3.99
3259 3507 4.570369 AGGGAGCAATTTTTGTTTTGAACG 59.430 37.500 0.00 0.00 0.00 3.95
3260 3508 6.435430 AAGGGAGCAATTTTTGTTTTGAAC 57.565 33.333 0.00 0.00 0.00 3.18
3261 3509 5.293079 CGAAGGGAGCAATTTTTGTTTTGAA 59.707 36.000 0.00 0.00 0.00 2.69
3262 3510 4.808364 CGAAGGGAGCAATTTTTGTTTTGA 59.192 37.500 0.00 0.00 0.00 2.69
3263 3511 4.570369 ACGAAGGGAGCAATTTTTGTTTTG 59.430 37.500 0.00 0.00 0.00 2.44
3264 3512 4.570369 CACGAAGGGAGCAATTTTTGTTTT 59.430 37.500 0.00 0.00 0.00 2.43
3265 3513 4.119136 CACGAAGGGAGCAATTTTTGTTT 58.881 39.130 0.00 0.00 0.00 2.83
3266 3514 3.716601 CACGAAGGGAGCAATTTTTGTT 58.283 40.909 0.00 0.00 0.00 2.83
3267 3515 2.545742 GCACGAAGGGAGCAATTTTTGT 60.546 45.455 0.00 0.00 0.00 2.83
3268 3516 2.061028 GCACGAAGGGAGCAATTTTTG 58.939 47.619 0.00 0.00 0.00 2.44
3269 3517 1.686052 TGCACGAAGGGAGCAATTTTT 59.314 42.857 0.00 0.00 34.97 1.94
3270 3518 1.327303 TGCACGAAGGGAGCAATTTT 58.673 45.000 0.00 0.00 34.97 1.82
3271 3519 1.270550 CTTGCACGAAGGGAGCAATTT 59.729 47.619 0.00 0.00 45.94 1.82
3272 3520 0.883833 CTTGCACGAAGGGAGCAATT 59.116 50.000 0.00 0.00 45.94 2.32
3273 3521 0.036732 TCTTGCACGAAGGGAGCAAT 59.963 50.000 0.00 0.00 45.94 3.56
3274 3522 0.884704 GTCTTGCACGAAGGGAGCAA 60.885 55.000 0.00 0.00 45.07 3.91
3275 3523 1.301716 GTCTTGCACGAAGGGAGCA 60.302 57.895 0.00 0.00 36.32 4.26
3276 3524 3.567473 GTCTTGCACGAAGGGAGC 58.433 61.111 0.00 0.00 31.85 4.70
3288 3536 1.587946 GTGGCTTGCAAAAACGTCTTG 59.412 47.619 0.00 6.08 0.00 3.02
3289 3537 1.470805 GGTGGCTTGCAAAAACGTCTT 60.471 47.619 0.00 0.00 0.00 3.01
3290 3538 0.102300 GGTGGCTTGCAAAAACGTCT 59.898 50.000 0.00 0.00 0.00 4.18
3291 3539 0.179124 TGGTGGCTTGCAAAAACGTC 60.179 50.000 0.00 0.00 0.00 4.34
3292 3540 0.463620 ATGGTGGCTTGCAAAAACGT 59.536 45.000 0.00 0.00 0.00 3.99
3293 3541 2.327568 CTATGGTGGCTTGCAAAAACG 58.672 47.619 0.00 0.00 0.00 3.60
3294 3542 2.068519 GCTATGGTGGCTTGCAAAAAC 58.931 47.619 0.00 0.00 0.00 2.43
3295 3543 1.336702 CGCTATGGTGGCTTGCAAAAA 60.337 47.619 0.00 0.00 0.00 1.94
3296 3544 0.243365 CGCTATGGTGGCTTGCAAAA 59.757 50.000 0.00 0.00 0.00 2.44
3297 3545 1.882311 CGCTATGGTGGCTTGCAAA 59.118 52.632 0.00 0.00 0.00 3.68
3298 3546 2.699768 GCGCTATGGTGGCTTGCAA 61.700 57.895 0.00 0.00 0.00 4.08
3299 3547 3.133464 GCGCTATGGTGGCTTGCA 61.133 61.111 0.00 0.00 0.00 4.08
3300 3548 2.699768 TTGCGCTATGGTGGCTTGC 61.700 57.895 9.73 0.00 0.00 4.01
3301 3549 1.137404 GTTGCGCTATGGTGGCTTG 59.863 57.895 9.73 0.00 0.00 4.01
3302 3550 1.303236 TGTTGCGCTATGGTGGCTT 60.303 52.632 9.73 0.00 0.00 4.35
3303 3551 2.040544 GTGTTGCGCTATGGTGGCT 61.041 57.895 9.73 0.00 0.00 4.75
3304 3552 2.485122 GTGTTGCGCTATGGTGGC 59.515 61.111 9.73 0.00 0.00 5.01
3305 3553 1.573829 AACGTGTTGCGCTATGGTGG 61.574 55.000 9.73 0.00 46.11 4.61
3306 3554 0.179225 GAACGTGTTGCGCTATGGTG 60.179 55.000 9.73 0.00 46.11 4.17
3307 3555 0.601576 TGAACGTGTTGCGCTATGGT 60.602 50.000 9.73 0.00 46.11 3.55
3308 3556 0.515127 TTGAACGTGTTGCGCTATGG 59.485 50.000 9.73 0.00 46.11 2.74
3309 3557 2.308347 TTTGAACGTGTTGCGCTATG 57.692 45.000 9.73 3.14 46.11 2.23
3310 3558 2.289547 ACTTTTGAACGTGTTGCGCTAT 59.710 40.909 9.73 0.00 46.11 2.97
3311 3559 1.666700 ACTTTTGAACGTGTTGCGCTA 59.333 42.857 9.73 0.00 46.11 4.26
3312 3560 0.450184 ACTTTTGAACGTGTTGCGCT 59.550 45.000 9.73 0.00 46.11 5.92
3313 3561 1.264672 AACTTTTGAACGTGTTGCGC 58.735 45.000 0.00 0.00 46.11 6.09
3314 3562 6.399144 AGTTTTTAACTTTTGAACGTGTTGCG 60.399 34.615 0.00 0.00 42.40 4.85
3315 3563 6.813327 AGTTTTTAACTTTTGAACGTGTTGC 58.187 32.000 0.00 0.00 39.04 4.17
3316 3564 9.931710 CTTAGTTTTTAACTTTTGAACGTGTTG 57.068 29.630 0.00 0.00 42.81 3.33
3317 3565 9.896263 TCTTAGTTTTTAACTTTTGAACGTGTT 57.104 25.926 0.00 0.00 42.81 3.32
3318 3566 9.333497 GTCTTAGTTTTTAACTTTTGAACGTGT 57.667 29.630 0.00 0.00 42.81 4.49
3319 3567 8.509923 CGTCTTAGTTTTTAACTTTTGAACGTG 58.490 33.333 0.00 0.00 42.81 4.49
3320 3568 8.229811 ACGTCTTAGTTTTTAACTTTTGAACGT 58.770 29.630 0.00 5.35 42.81 3.99
3321 3569 8.591698 ACGTCTTAGTTTTTAACTTTTGAACG 57.408 30.769 0.00 4.84 42.81 3.95
3359 3607 8.001881 ACCTACATATGTGTTGTGTTCAAAAA 57.998 30.769 18.81 0.00 39.77 1.94
3360 3608 7.575414 ACCTACATATGTGTTGTGTTCAAAA 57.425 32.000 18.81 0.00 39.77 2.44
3361 3609 7.575414 AACCTACATATGTGTTGTGTTCAAA 57.425 32.000 18.81 0.00 39.77 2.69
3362 3610 7.421599 CAAACCTACATATGTGTTGTGTTCAA 58.578 34.615 18.81 0.00 39.77 2.69
3363 3611 6.514212 GCAAACCTACATATGTGTTGTGTTCA 60.514 38.462 18.81 0.00 39.77 3.18
3364 3612 5.856455 GCAAACCTACATATGTGTTGTGTTC 59.144 40.000 18.81 0.00 39.77 3.18
3365 3613 5.534654 AGCAAACCTACATATGTGTTGTGTT 59.465 36.000 18.81 10.60 39.77 3.32
3366 3614 5.070001 AGCAAACCTACATATGTGTTGTGT 58.930 37.500 18.81 5.02 39.77 3.72
3367 3615 5.627499 AGCAAACCTACATATGTGTTGTG 57.373 39.130 18.81 14.39 39.77 3.33
3368 3616 7.753309 TTTAGCAAACCTACATATGTGTTGT 57.247 32.000 18.81 9.42 39.77 3.32
3369 3617 9.289303 GATTTTAGCAAACCTACATATGTGTTG 57.711 33.333 18.81 16.00 39.77 3.33
3370 3618 9.019656 TGATTTTAGCAAACCTACATATGTGTT 57.980 29.630 18.81 11.71 39.77 3.32
3371 3619 8.574251 TGATTTTAGCAAACCTACATATGTGT 57.426 30.769 18.81 5.81 42.39 3.72
3372 3620 7.645340 GCTGATTTTAGCAAACCTACATATGTG 59.355 37.037 18.81 5.13 43.17 3.21
3373 3621 7.557719 AGCTGATTTTAGCAAACCTACATATGT 59.442 33.333 13.93 13.93 46.07 2.29
3374 3622 7.934457 AGCTGATTTTAGCAAACCTACATATG 58.066 34.615 0.00 0.00 46.07 1.78
3375 3623 7.041780 CGAGCTGATTTTAGCAAACCTACATAT 60.042 37.037 0.00 0.00 46.07 1.78
3376 3624 6.257849 CGAGCTGATTTTAGCAAACCTACATA 59.742 38.462 0.00 0.00 46.07 2.29
3377 3625 5.065218 CGAGCTGATTTTAGCAAACCTACAT 59.935 40.000 0.00 0.00 46.07 2.29
3378 3626 4.391830 CGAGCTGATTTTAGCAAACCTACA 59.608 41.667 0.00 0.00 46.07 2.74
3379 3627 4.630069 TCGAGCTGATTTTAGCAAACCTAC 59.370 41.667 0.00 0.00 46.07 3.18
3380 3628 4.827692 TCGAGCTGATTTTAGCAAACCTA 58.172 39.130 0.00 0.00 46.07 3.08
3381 3629 3.674997 TCGAGCTGATTTTAGCAAACCT 58.325 40.909 0.00 0.00 46.07 3.50
3382 3630 3.729163 GCTCGAGCTGATTTTAGCAAACC 60.729 47.826 29.88 0.00 46.07 3.27
3383 3631 3.420828 GCTCGAGCTGATTTTAGCAAAC 58.579 45.455 29.88 0.00 46.07 2.93
3384 3632 2.094258 CGCTCGAGCTGATTTTAGCAAA 59.906 45.455 32.88 0.00 46.07 3.68
3385 3633 1.660607 CGCTCGAGCTGATTTTAGCAA 59.339 47.619 32.88 0.00 46.07 3.91
3386 3634 1.280982 CGCTCGAGCTGATTTTAGCA 58.719 50.000 32.88 0.00 46.07 3.49
3387 3635 1.281899 ACGCTCGAGCTGATTTTAGC 58.718 50.000 32.88 5.86 44.01 3.09
3388 3636 6.936222 ATAATACGCTCGAGCTGATTTTAG 57.064 37.500 32.88 18.03 39.32 1.85
3389 3637 8.080417 AGTTATAATACGCTCGAGCTGATTTTA 58.920 33.333 32.88 24.15 39.32 1.52
3390 3638 6.924060 AGTTATAATACGCTCGAGCTGATTTT 59.076 34.615 32.88 25.00 39.32 1.82
3391 3639 6.448006 AGTTATAATACGCTCGAGCTGATTT 58.552 36.000 32.88 21.92 39.32 2.17
3392 3640 6.015027 AGTTATAATACGCTCGAGCTGATT 57.985 37.500 32.88 29.27 39.32 2.57
3393 3641 5.630661 AGTTATAATACGCTCGAGCTGAT 57.369 39.130 32.88 22.65 39.32 2.90
3394 3642 6.549912 TTAGTTATAATACGCTCGAGCTGA 57.450 37.500 32.88 21.45 39.32 4.26
3395 3643 5.284188 GCTTAGTTATAATACGCTCGAGCTG 59.716 44.000 32.88 26.84 39.32 4.24
3396 3644 5.392286 GCTTAGTTATAATACGCTCGAGCT 58.608 41.667 32.88 22.11 39.32 4.09
3397 3645 4.260194 CGCTTAGTTATAATACGCTCGAGC 59.740 45.833 27.64 27.64 37.78 5.03
3398 3646 5.380651 ACGCTTAGTTATAATACGCTCGAG 58.619 41.667 8.45 8.45 0.00 4.04
3399 3647 5.348418 ACGCTTAGTTATAATACGCTCGA 57.652 39.130 0.00 0.00 0.00 4.04
3400 3648 7.716738 AATACGCTTAGTTATAATACGCTCG 57.283 36.000 0.00 0.00 0.00 5.03
3411 3659 9.403110 GCTGCTTAGTTATAATACGCTTAGTTA 57.597 33.333 0.00 0.00 0.00 2.24
3412 3660 7.114529 CGCTGCTTAGTTATAATACGCTTAGTT 59.885 37.037 0.00 0.00 0.00 2.24
3413 3661 6.581542 CGCTGCTTAGTTATAATACGCTTAGT 59.418 38.462 0.00 0.00 0.00 2.24
3414 3662 6.581542 ACGCTGCTTAGTTATAATACGCTTAG 59.418 38.462 0.00 0.00 0.00 2.18
3415 3663 6.441274 ACGCTGCTTAGTTATAATACGCTTA 58.559 36.000 0.00 0.00 0.00 3.09
3416 3664 5.287226 ACGCTGCTTAGTTATAATACGCTT 58.713 37.500 0.00 0.00 0.00 4.68
3417 3665 4.868067 ACGCTGCTTAGTTATAATACGCT 58.132 39.130 0.00 0.00 0.00 5.07
3418 3666 6.866179 ATACGCTGCTTAGTTATAATACGC 57.134 37.500 0.00 0.00 0.00 4.42
3426 3674 9.403110 GCTTAGTTATAATACGCTGCTTAGTTA 57.597 33.333 0.00 0.00 0.00 2.24
3427 3675 7.114529 CGCTTAGTTATAATACGCTGCTTAGTT 59.885 37.037 0.00 0.00 0.00 2.24
3428 3676 6.581542 CGCTTAGTTATAATACGCTGCTTAGT 59.418 38.462 0.00 0.00 0.00 2.24
3429 3677 6.581542 ACGCTTAGTTATAATACGCTGCTTAG 59.418 38.462 0.00 0.00 0.00 2.18
3430 3678 6.441274 ACGCTTAGTTATAATACGCTGCTTA 58.559 36.000 0.00 0.00 0.00 3.09
3431 3679 5.287226 ACGCTTAGTTATAATACGCTGCTT 58.713 37.500 0.00 0.00 0.00 3.91
3432 3680 4.868067 ACGCTTAGTTATAATACGCTGCT 58.132 39.130 0.00 0.00 0.00 4.24
3433 3681 5.219731 CGTACGCTTAGTTATAATACGCTGC 60.220 44.000 0.52 0.00 0.00 5.25
3434 3682 5.219731 GCGTACGCTTAGTTATAATACGCTG 60.220 44.000 31.95 9.71 43.44 5.18
3435 3683 4.848299 GCGTACGCTTAGTTATAATACGCT 59.152 41.667 31.95 4.90 43.44 5.07
3436 3684 5.093751 GCGTACGCTTAGTTATAATACGC 57.906 43.478 31.95 16.95 41.90 4.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.