Multiple sequence alignment - TraesCS2B01G384100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G384100 chr2B 100.000 2639 0 0 1 2639 547866226 547863588 0.000000e+00 4874
1 TraesCS2B01G384100 chr2A 91.985 1809 107 19 69 1852 610996727 610994932 0.000000e+00 2503
2 TraesCS2B01G384100 chr2A 88.235 272 18 5 1953 2212 610981018 610980749 1.970000e-81 313
3 TraesCS2B01G384100 chr2D 92.985 1511 88 10 355 1851 469227345 469225839 0.000000e+00 2187
4 TraesCS2B01G384100 chr2D 94.145 427 24 1 2213 2639 635805475 635805050 0.000000e+00 649
5 TraesCS2B01G384100 chr2D 91.235 251 12 1 1972 2212 469225575 469225325 1.510000e-87 333
6 TraesCS2B01G384100 chr2D 92.958 213 13 1 105 315 469227556 469227344 2.550000e-80 309
7 TraesCS2B01G384100 chr4A 81.057 1135 179 20 554 1677 726577159 726576050 0.000000e+00 872
8 TraesCS2B01G384100 chr7A 80.531 1130 185 20 554 1671 10830816 10831922 0.000000e+00 835
9 TraesCS2B01G384100 chr7A 79.355 1148 191 32 554 1677 10380433 10381558 0.000000e+00 765
10 TraesCS2B01G384100 chr7D 79.824 1135 184 33 554 1671 11260993 11262099 0.000000e+00 785
11 TraesCS2B01G384100 chr7B 95.082 427 20 1 2213 2639 43762035 43761610 0.000000e+00 671
12 TraesCS2B01G384100 chr6A 95.035 423 21 0 2217 2639 582631468 582631890 0.000000e+00 665
13 TraesCS2B01G384100 chr1B 94.340 424 22 2 2217 2639 668064097 668063675 0.000000e+00 649
14 TraesCS2B01G384100 chr1B 92.974 427 30 0 2213 2639 395063729 395063303 8.020000e-175 623
15 TraesCS2B01G384100 chr4D 93.443 427 28 0 2213 2639 19148383 19148809 3.710000e-178 634
16 TraesCS2B01G384100 chr5D 92.807 431 29 2 2210 2639 497929866 497929437 8.020000e-175 623
17 TraesCS2B01G384100 chr6D 92.706 425 31 0 2213 2637 54232774 54233198 4.830000e-172 614
18 TraesCS2B01G384100 chr6D 91.324 438 36 1 2202 2639 94778181 94777746 4.860000e-167 597


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G384100 chr2B 547863588 547866226 2638 True 4874 4874 100.000000 1 2639 1 chr2B.!!$R1 2638
1 TraesCS2B01G384100 chr2A 610994932 610996727 1795 True 2503 2503 91.985000 69 1852 1 chr2A.!!$R2 1783
2 TraesCS2B01G384100 chr2D 469225325 469227556 2231 True 943 2187 92.392667 105 2212 3 chr2D.!!$R2 2107
3 TraesCS2B01G384100 chr4A 726576050 726577159 1109 True 872 872 81.057000 554 1677 1 chr4A.!!$R1 1123
4 TraesCS2B01G384100 chr7A 10830816 10831922 1106 False 835 835 80.531000 554 1671 1 chr7A.!!$F2 1117
5 TraesCS2B01G384100 chr7A 10380433 10381558 1125 False 765 765 79.355000 554 1677 1 chr7A.!!$F1 1123
6 TraesCS2B01G384100 chr7D 11260993 11262099 1106 False 785 785 79.824000 554 1671 1 chr7D.!!$F1 1117

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
735 768 0.03309 GGTGCATACGCTACTACCCC 59.967 60.0 0.0 0.0 39.64 4.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2253 2489 0.037303 CTGGCTGGGTTGAGATGTGT 59.963 55.0 0.0 0.0 0.0 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.807977 TTTTGAAAGAAGTCAGTTCTATGCT 57.192 32.000 0.00 0.00 45.44 3.79
25 26 7.807977 TTTGAAAGAAGTCAGTTCTATGCTT 57.192 32.000 0.00 0.00 45.44 3.91
26 27 7.807977 TTGAAAGAAGTCAGTTCTATGCTTT 57.192 32.000 0.00 0.00 45.44 3.51
27 28 7.194607 TGAAAGAAGTCAGTTCTATGCTTTG 57.805 36.000 0.00 0.00 45.44 2.77
28 29 5.619625 AAGAAGTCAGTTCTATGCTTTGC 57.380 39.130 0.00 0.00 45.44 3.68
29 30 4.904241 AGAAGTCAGTTCTATGCTTTGCT 58.096 39.130 0.00 0.00 44.26 3.91
30 31 5.312079 AGAAGTCAGTTCTATGCTTTGCTT 58.688 37.500 0.00 0.00 44.26 3.91
31 32 5.180868 AGAAGTCAGTTCTATGCTTTGCTTG 59.819 40.000 0.00 0.00 44.26 4.01
32 33 3.190118 AGTCAGTTCTATGCTTTGCTTGC 59.810 43.478 0.00 0.00 0.00 4.01
33 34 3.190118 GTCAGTTCTATGCTTTGCTTGCT 59.810 43.478 0.00 0.00 0.00 3.91
34 35 3.822735 TCAGTTCTATGCTTTGCTTGCTT 59.177 39.130 0.00 0.00 0.00 3.91
35 36 3.918591 CAGTTCTATGCTTTGCTTGCTTG 59.081 43.478 0.00 0.00 0.00 4.01
36 37 2.642139 TCTATGCTTTGCTTGCTTGC 57.358 45.000 0.00 0.00 0.00 4.01
37 38 2.165167 TCTATGCTTTGCTTGCTTGCT 58.835 42.857 3.47 0.00 0.00 3.91
38 39 2.559668 TCTATGCTTTGCTTGCTTGCTT 59.440 40.909 3.47 0.00 0.00 3.91
39 40 2.249844 ATGCTTTGCTTGCTTGCTTT 57.750 40.000 3.47 0.00 0.00 3.51
40 41 1.292061 TGCTTTGCTTGCTTGCTTTG 58.708 45.000 3.47 0.00 0.00 2.77
41 42 1.292992 GCTTTGCTTGCTTGCTTTGT 58.707 45.000 3.47 0.00 0.00 2.83
42 43 2.159128 TGCTTTGCTTGCTTGCTTTGTA 60.159 40.909 3.47 0.00 0.00 2.41
43 44 3.062042 GCTTTGCTTGCTTGCTTTGTAT 58.938 40.909 3.47 0.00 0.00 2.29
44 45 3.120786 GCTTTGCTTGCTTGCTTTGTATG 60.121 43.478 3.47 0.00 0.00 2.39
45 46 4.300803 CTTTGCTTGCTTGCTTTGTATGA 58.699 39.130 3.47 0.00 0.00 2.15
46 47 4.524316 TTGCTTGCTTGCTTTGTATGAT 57.476 36.364 3.47 0.00 0.00 2.45
47 48 4.524316 TGCTTGCTTGCTTTGTATGATT 57.476 36.364 3.47 0.00 0.00 2.57
48 49 4.239304 TGCTTGCTTGCTTTGTATGATTG 58.761 39.130 3.47 0.00 0.00 2.67
49 50 3.061697 GCTTGCTTGCTTTGTATGATTGC 59.938 43.478 0.00 0.00 0.00 3.56
50 51 2.866198 TGCTTGCTTTGTATGATTGCG 58.134 42.857 0.00 0.00 0.00 4.85
51 52 2.487372 TGCTTGCTTTGTATGATTGCGA 59.513 40.909 0.00 0.00 0.00 5.10
52 53 3.103738 GCTTGCTTTGTATGATTGCGAG 58.896 45.455 0.00 0.00 37.98 5.03
53 54 2.830772 TGCTTTGTATGATTGCGAGC 57.169 45.000 0.00 0.00 0.00 5.03
54 55 1.062440 TGCTTTGTATGATTGCGAGCG 59.938 47.619 0.00 0.00 0.00 5.03
55 56 1.595489 GCTTTGTATGATTGCGAGCGG 60.595 52.381 0.00 0.00 0.00 5.52
56 57 1.665679 CTTTGTATGATTGCGAGCGGT 59.334 47.619 0.00 0.00 0.00 5.68
57 58 2.588027 TTGTATGATTGCGAGCGGTA 57.412 45.000 0.00 0.00 0.00 4.02
58 59 2.812358 TGTATGATTGCGAGCGGTAT 57.188 45.000 0.00 0.00 0.00 2.73
59 60 2.403259 TGTATGATTGCGAGCGGTATG 58.597 47.619 0.00 0.00 0.00 2.39
60 61 1.126846 GTATGATTGCGAGCGGTATGC 59.873 52.381 4.50 4.50 46.98 3.14
92 93 8.135382 TCTTAGCCAATTAGGTACTGGATATC 57.865 38.462 2.39 0.00 41.52 1.63
120 121 8.479280 GTTTGTACAAAATTGTGATGTGCTTAG 58.521 33.333 22.14 0.00 42.31 2.18
130 131 1.399791 GATGTGCTTAGAACAGCTGGC 59.600 52.381 19.93 11.05 40.79 4.85
139 140 2.350522 AGAACAGCTGGCGATTACTTG 58.649 47.619 19.93 0.00 0.00 3.16
143 144 2.279741 CAGCTGGCGATTACTTGCTTA 58.720 47.619 5.57 0.00 31.87 3.09
144 145 2.874701 CAGCTGGCGATTACTTGCTTAT 59.125 45.455 5.57 0.00 31.87 1.73
190 193 3.058224 CGGGCTTTAGTCTTTTTGGACTG 60.058 47.826 7.31 0.00 44.98 3.51
243 246 3.567478 TAGTGCACACCGTCAGCCG 62.567 63.158 21.04 0.00 0.00 5.52
268 271 0.311790 GTTGTAGGTCGTCACGTCCA 59.688 55.000 16.06 0.00 37.51 4.02
275 279 3.991051 CGTCACGTCCAGGGCTGT 61.991 66.667 0.00 0.00 0.00 4.40
339 343 2.183679 GATCCCATCGATTCTAGGCCT 58.816 52.381 11.78 11.78 0.00 5.19
346 350 0.312416 CGATTCTAGGCCTCGGTGAG 59.688 60.000 9.68 0.00 0.00 3.51
388 394 2.108566 ATAGCAGCAGCAGAGCGG 59.891 61.111 3.17 0.00 45.49 5.52
389 395 2.429767 ATAGCAGCAGCAGAGCGGA 61.430 57.895 3.17 0.00 45.49 5.54
424 430 4.790962 TACTCCCGGTCGCTCGCT 62.791 66.667 0.00 0.00 0.00 4.93
503 511 0.391130 CGACGCTTCTCAATCCCCAA 60.391 55.000 0.00 0.00 0.00 4.12
508 516 2.363683 GCTTCTCAATCCCCAACTCTG 58.636 52.381 0.00 0.00 0.00 3.35
509 517 2.026822 GCTTCTCAATCCCCAACTCTGA 60.027 50.000 0.00 0.00 0.00 3.27
517 533 3.114616 CCAACTCTGAGCACCGCG 61.115 66.667 4.19 0.00 0.00 6.46
530 546 4.794648 CCGCGGCCTTTGATCCCA 62.795 66.667 14.67 0.00 0.00 4.37
532 548 2.120909 CGCGGCCTTTGATCCCAAT 61.121 57.895 0.00 0.00 31.46 3.16
640 663 3.270000 TCGTGTTCGAGATCGCCA 58.730 55.556 0.00 0.00 41.35 5.69
735 768 0.033090 GGTGCATACGCTACTACCCC 59.967 60.000 0.00 0.00 39.64 4.95
789 825 1.203523 GTGTCAGTCTACCTGGAGCTG 59.796 57.143 0.00 3.13 41.83 4.24
857 893 4.396166 GGTCAACCATGAAATCGATCTGTT 59.604 41.667 0.00 0.00 37.30 3.16
873 912 2.847234 TTCACGGGGAGGTGCTGT 60.847 61.111 0.00 0.00 37.83 4.40
902 941 0.450583 CCGACAGAGTTCGATTCCGA 59.549 55.000 0.00 0.00 41.78 4.55
904 943 1.536149 GACAGAGTTCGATTCCGACG 58.464 55.000 0.00 0.00 45.50 5.12
905 944 0.456312 ACAGAGTTCGATTCCGACGC 60.456 55.000 0.00 0.00 45.50 5.19
906 945 1.139095 AGAGTTCGATTCCGACGCC 59.861 57.895 0.00 0.00 45.50 5.68
907 946 1.153901 GAGTTCGATTCCGACGCCA 60.154 57.895 0.00 0.00 45.50 5.69
908 947 1.140407 GAGTTCGATTCCGACGCCAG 61.140 60.000 0.00 0.00 45.50 4.85
909 948 2.508439 TTCGATTCCGACGCCAGC 60.508 61.111 0.00 0.00 45.50 4.85
910 949 3.289704 TTCGATTCCGACGCCAGCA 62.290 57.895 0.00 0.00 45.50 4.41
911 950 2.773397 TTCGATTCCGACGCCAGCAA 62.773 55.000 0.00 0.00 45.50 3.91
912 951 2.802667 CGATTCCGACGCCAGCAAG 61.803 63.158 0.00 0.00 38.22 4.01
1090 1144 3.525199 ACCCTCAGACTTGGCAGATAATT 59.475 43.478 0.00 0.00 0.00 1.40
1102 1156 6.617782 TGGCAGATAATTTTGGAAAATGGA 57.382 33.333 0.00 0.00 38.53 3.41
1103 1157 6.642430 TGGCAGATAATTTTGGAAAATGGAG 58.358 36.000 0.00 0.00 38.53 3.86
1107 1161 7.704047 GCAGATAATTTTGGAAAATGGAGAGAC 59.296 37.037 0.00 0.00 38.53 3.36
1164 1218 1.796796 GGAGACTTTCCATGCGCAC 59.203 57.895 14.90 0.00 46.01 5.34
1168 1222 0.730494 GACTTTCCATGCGCACAAGC 60.730 55.000 14.90 5.80 37.71 4.01
1317 1371 2.787473 ACTCGGATTCATTGCCTTCA 57.213 45.000 0.00 0.00 0.00 3.02
1319 1373 1.672881 CTCGGATTCATTGCCTTCACC 59.327 52.381 0.00 0.00 0.00 4.02
1323 1377 1.672881 GATTCATTGCCTTCACCGGAG 59.327 52.381 9.46 0.00 0.00 4.63
1343 1397 0.839946 AACCCCGATGAGGAGAATGG 59.160 55.000 0.00 0.00 45.00 3.16
1345 1399 1.699054 CCCCGATGAGGAGAATGGCA 61.699 60.000 0.00 0.00 45.00 4.92
1402 1456 2.148446 TGCCATGGAAAGGATGAAGG 57.852 50.000 18.40 0.00 0.00 3.46
1407 1461 3.635373 CCATGGAAAGGATGAAGGTGATG 59.365 47.826 5.56 0.00 0.00 3.07
1565 1619 0.532115 GTTGCAAGCCAAGGGTATGG 59.468 55.000 0.00 0.00 43.70 2.74
1631 1685 3.768468 GAGAGTAACGAAGTCTCCCAG 57.232 52.381 13.20 0.00 45.00 4.45
1656 1710 2.040544 GTGTGCTCATTCCGGGGTG 61.041 63.158 0.00 0.30 0.00 4.61
1825 1882 9.473640 GCTTAATTACCTGTACTACTTGATACC 57.526 37.037 0.00 0.00 0.00 2.73
1848 1905 4.020751 CCGACCATATGAGATGAATCTGGT 60.021 45.833 3.65 0.00 37.25 4.00
1849 1906 5.512060 CCGACCATATGAGATGAATCTGGTT 60.512 44.000 3.65 0.00 37.25 3.67
1850 1907 5.994054 CGACCATATGAGATGAATCTGGTTT 59.006 40.000 3.65 0.00 37.25 3.27
1851 1908 6.484643 CGACCATATGAGATGAATCTGGTTTT 59.515 38.462 3.65 0.00 37.25 2.43
1852 1909 7.012704 CGACCATATGAGATGAATCTGGTTTTT 59.987 37.037 3.65 0.00 37.25 1.94
1937 1994 3.067601 GGGGACACTTTCAATTCGTTGTT 59.932 43.478 0.00 0.00 0.00 2.83
2069 2295 1.203441 TGGGAACTGCCAGCTCTGAT 61.203 55.000 0.00 0.00 38.95 2.90
2078 2304 1.948145 GCCAGCTCTGATTTGGATGAG 59.052 52.381 10.69 0.00 33.76 2.90
2087 2313 8.216423 AGCTCTGATTTGGATGAGTATAATGTT 58.784 33.333 0.00 0.00 0.00 2.71
2100 2326 9.693739 ATGAGTATAATGTTTGTCAATTGGGTA 57.306 29.630 5.42 0.00 0.00 3.69
2167 2403 1.957177 CTCGTGGGCTCTAGCAGATTA 59.043 52.381 4.07 0.00 44.36 1.75
2177 2413 5.508825 GGCTCTAGCAGATTATCCATATCCG 60.509 48.000 4.07 0.00 44.36 4.18
2180 2416 4.558226 AGCAGATTATCCATATCCGCAA 57.442 40.909 0.00 0.00 0.00 4.85
2200 2436 5.231357 CGCAACCTCTTAAAAAGTTTTGGAC 59.769 40.000 0.61 0.00 0.00 4.02
2213 2449 6.944234 AAGTTTTGGACTTCACTCTAAAGG 57.056 37.500 0.00 0.00 45.40 3.11
2214 2450 4.822350 AGTTTTGGACTTCACTCTAAAGGC 59.178 41.667 0.00 0.00 33.92 4.35
2217 2453 2.979240 GGACTTCACTCTAAAGGCCTG 58.021 52.381 5.69 0.00 46.72 4.85
2218 2454 2.303311 GGACTTCACTCTAAAGGCCTGT 59.697 50.000 5.69 1.77 46.72 4.00
2219 2455 3.244596 GGACTTCACTCTAAAGGCCTGTT 60.245 47.826 5.69 5.66 46.72 3.16
2220 2456 4.390264 GACTTCACTCTAAAGGCCTGTTT 58.610 43.478 5.69 0.00 0.00 2.83
2221 2457 4.137543 ACTTCACTCTAAAGGCCTGTTTG 58.862 43.478 5.69 4.42 0.00 2.93
2222 2458 3.140325 TCACTCTAAAGGCCTGTTTGG 57.860 47.619 5.69 0.00 39.35 3.28
2223 2459 2.441750 TCACTCTAAAGGCCTGTTTGGT 59.558 45.455 5.69 0.00 38.35 3.67
2224 2460 3.117663 TCACTCTAAAGGCCTGTTTGGTT 60.118 43.478 5.69 0.00 38.35 3.67
2225 2461 3.004734 CACTCTAAAGGCCTGTTTGGTTG 59.995 47.826 5.69 0.67 38.35 3.77
2226 2462 1.960689 TCTAAAGGCCTGTTTGGTTGC 59.039 47.619 5.69 0.00 38.35 4.17
2227 2463 1.686052 CTAAAGGCCTGTTTGGTTGCA 59.314 47.619 5.69 0.00 38.35 4.08
2228 2464 0.465287 AAAGGCCTGTTTGGTTGCAG 59.535 50.000 5.69 0.00 38.35 4.41
2229 2465 0.687427 AAGGCCTGTTTGGTTGCAGT 60.687 50.000 5.69 0.00 38.35 4.40
2230 2466 1.109323 AGGCCTGTTTGGTTGCAGTC 61.109 55.000 3.11 0.00 38.35 3.51
2231 2467 1.109323 GGCCTGTTTGGTTGCAGTCT 61.109 55.000 0.00 0.00 38.35 3.24
2232 2468 0.746659 GCCTGTTTGGTTGCAGTCTT 59.253 50.000 0.00 0.00 38.35 3.01
2233 2469 1.536709 GCCTGTTTGGTTGCAGTCTTG 60.537 52.381 0.00 0.00 38.35 3.02
2234 2470 2.023673 CCTGTTTGGTTGCAGTCTTGA 58.976 47.619 0.00 0.00 0.00 3.02
2235 2471 2.426738 CCTGTTTGGTTGCAGTCTTGAA 59.573 45.455 0.00 0.00 0.00 2.69
2236 2472 3.438360 CTGTTTGGTTGCAGTCTTGAAC 58.562 45.455 0.00 0.00 0.00 3.18
2237 2473 2.822561 TGTTTGGTTGCAGTCTTGAACA 59.177 40.909 0.00 0.00 0.00 3.18
2238 2474 3.119531 TGTTTGGTTGCAGTCTTGAACAG 60.120 43.478 0.00 0.00 0.00 3.16
2239 2475 2.418368 TGGTTGCAGTCTTGAACAGT 57.582 45.000 0.00 0.00 0.00 3.55
2240 2476 3.552132 TGGTTGCAGTCTTGAACAGTA 57.448 42.857 0.00 0.00 0.00 2.74
2241 2477 3.202906 TGGTTGCAGTCTTGAACAGTAC 58.797 45.455 0.00 0.00 0.00 2.73
2242 2478 2.548480 GGTTGCAGTCTTGAACAGTACC 59.452 50.000 0.00 0.00 0.00 3.34
2243 2479 3.467803 GTTGCAGTCTTGAACAGTACCT 58.532 45.455 0.00 0.00 0.00 3.08
2244 2480 3.111853 TGCAGTCTTGAACAGTACCTG 57.888 47.619 0.00 0.00 37.52 4.00
2245 2481 1.801178 GCAGTCTTGAACAGTACCTGC 59.199 52.381 0.00 0.00 34.37 4.85
2246 2482 2.061773 CAGTCTTGAACAGTACCTGCG 58.938 52.381 0.00 0.00 34.37 5.18
2247 2483 1.687123 AGTCTTGAACAGTACCTGCGT 59.313 47.619 0.00 0.00 34.37 5.24
2248 2484 2.102588 AGTCTTGAACAGTACCTGCGTT 59.897 45.455 0.00 0.00 34.37 4.84
2249 2485 2.221055 GTCTTGAACAGTACCTGCGTTG 59.779 50.000 0.00 0.00 34.37 4.10
2250 2486 0.941542 TTGAACAGTACCTGCGTTGC 59.058 50.000 0.00 0.00 34.37 4.17
2251 2487 0.179070 TGAACAGTACCTGCGTTGCA 60.179 50.000 0.00 0.00 34.37 4.08
2252 2488 1.156736 GAACAGTACCTGCGTTGCAT 58.843 50.000 0.00 0.00 38.13 3.96
2253 2489 2.289133 TGAACAGTACCTGCGTTGCATA 60.289 45.455 0.00 0.00 38.13 3.14
2254 2490 1.722011 ACAGTACCTGCGTTGCATAC 58.278 50.000 0.00 0.00 38.13 2.39
2255 2491 1.001520 ACAGTACCTGCGTTGCATACA 59.998 47.619 5.62 0.00 38.13 2.29
2256 2492 1.393539 CAGTACCTGCGTTGCATACAC 59.606 52.381 5.62 0.00 38.13 2.90
2257 2493 1.001520 AGTACCTGCGTTGCATACACA 59.998 47.619 5.62 0.00 38.13 3.72
2258 2494 2.006888 GTACCTGCGTTGCATACACAT 58.993 47.619 0.00 0.00 38.13 3.21
2259 2495 1.086696 ACCTGCGTTGCATACACATC 58.913 50.000 0.00 0.00 38.13 3.06
2260 2496 1.339055 ACCTGCGTTGCATACACATCT 60.339 47.619 0.00 0.00 38.13 2.90
2261 2497 1.328680 CCTGCGTTGCATACACATCTC 59.671 52.381 0.00 0.00 38.13 2.75
2262 2498 2.001872 CTGCGTTGCATACACATCTCA 58.998 47.619 0.00 0.00 38.13 3.27
2263 2499 2.416202 CTGCGTTGCATACACATCTCAA 59.584 45.455 0.00 0.00 38.13 3.02
2264 2500 2.159430 TGCGTTGCATACACATCTCAAC 59.841 45.455 0.00 0.00 31.71 3.18
2265 2501 2.476185 GCGTTGCATACACATCTCAACC 60.476 50.000 0.00 0.00 35.03 3.77
2266 2502 2.095853 CGTTGCATACACATCTCAACCC 59.904 50.000 0.00 0.00 35.03 4.11
2267 2503 3.081061 GTTGCATACACATCTCAACCCA 58.919 45.455 0.00 0.00 33.05 4.51
2268 2504 2.989909 TGCATACACATCTCAACCCAG 58.010 47.619 0.00 0.00 0.00 4.45
2269 2505 1.672881 GCATACACATCTCAACCCAGC 59.327 52.381 0.00 0.00 0.00 4.85
2270 2506 2.292267 CATACACATCTCAACCCAGCC 58.708 52.381 0.00 0.00 0.00 4.85
2271 2507 1.357137 TACACATCTCAACCCAGCCA 58.643 50.000 0.00 0.00 0.00 4.75
2272 2508 0.037303 ACACATCTCAACCCAGCCAG 59.963 55.000 0.00 0.00 0.00 4.85
2273 2509 0.679002 CACATCTCAACCCAGCCAGG 60.679 60.000 0.00 0.00 37.03 4.45
2274 2510 1.751927 CATCTCAACCCAGCCAGGC 60.752 63.158 1.84 1.84 35.39 4.85
2275 2511 1.927527 ATCTCAACCCAGCCAGGCT 60.928 57.895 8.70 8.70 40.77 4.58
2276 2512 1.919600 ATCTCAACCCAGCCAGGCTC 61.920 60.000 12.53 0.00 36.40 4.70
2277 2513 2.530151 TCAACCCAGCCAGGCTCT 60.530 61.111 12.53 0.00 36.40 4.09
2278 2514 2.360852 CAACCCAGCCAGGCTCTG 60.361 66.667 12.53 8.20 36.40 3.35
2279 2515 2.530151 AACCCAGCCAGGCTCTGA 60.530 61.111 12.53 0.00 36.40 3.27
2280 2516 2.156098 AACCCAGCCAGGCTCTGAA 61.156 57.895 12.53 0.00 36.40 3.02
2281 2517 1.719063 AACCCAGCCAGGCTCTGAAA 61.719 55.000 12.53 0.00 36.40 2.69
2282 2518 1.075482 CCCAGCCAGGCTCTGAAAA 59.925 57.895 12.53 0.00 36.40 2.29
2283 2519 0.540365 CCCAGCCAGGCTCTGAAAAA 60.540 55.000 12.53 0.00 36.40 1.94
2300 2536 3.764885 AAAAACAGCCTCATATGCGAC 57.235 42.857 0.00 0.00 0.00 5.19
2301 2537 2.401583 AAACAGCCTCATATGCGACA 57.598 45.000 0.00 0.00 0.00 4.35
2302 2538 2.627515 AACAGCCTCATATGCGACAT 57.372 45.000 0.00 0.00 0.00 3.06
2303 2539 3.751479 AACAGCCTCATATGCGACATA 57.249 42.857 0.00 0.00 0.00 2.29
2304 2540 3.969287 ACAGCCTCATATGCGACATAT 57.031 42.857 0.00 6.54 0.00 1.78
2305 2541 3.593096 ACAGCCTCATATGCGACATATG 58.407 45.455 22.92 22.92 34.26 1.78
2306 2542 2.350804 CAGCCTCATATGCGACATATGC 59.649 50.000 23.58 16.82 33.29 3.14
2307 2543 1.325640 GCCTCATATGCGACATATGCG 59.674 52.381 23.58 19.94 33.29 4.73
2308 2544 2.879826 CCTCATATGCGACATATGCGA 58.120 47.619 23.58 13.51 33.29 5.10
2309 2545 2.856557 CCTCATATGCGACATATGCGAG 59.143 50.000 23.58 18.83 33.29 5.03
2310 2546 3.428045 CCTCATATGCGACATATGCGAGA 60.428 47.826 23.58 12.80 33.29 4.04
2311 2547 4.357996 CTCATATGCGACATATGCGAGAT 58.642 43.478 23.58 13.20 33.29 2.75
2312 2548 4.107622 TCATATGCGACATATGCGAGATG 58.892 43.478 23.58 16.62 33.29 2.90
2313 2549 2.445565 ATGCGACATATGCGAGATGT 57.554 45.000 19.23 0.00 40.25 3.06
2314 2550 2.223537 TGCGACATATGCGAGATGTT 57.776 45.000 19.23 0.00 37.65 2.71
2315 2551 2.549926 TGCGACATATGCGAGATGTTT 58.450 42.857 19.23 0.00 37.65 2.83
2316 2552 2.284952 TGCGACATATGCGAGATGTTTG 59.715 45.455 19.23 0.00 37.65 2.93
2317 2553 2.348872 GCGACATATGCGAGATGTTTGG 60.349 50.000 19.23 0.00 37.65 3.28
2318 2554 2.866156 CGACATATGCGAGATGTTTGGT 59.134 45.455 12.34 0.00 37.65 3.67
2319 2555 3.309682 CGACATATGCGAGATGTTTGGTT 59.690 43.478 12.34 0.00 37.65 3.67
2320 2556 4.591202 GACATATGCGAGATGTTTGGTTG 58.409 43.478 1.58 0.00 37.65 3.77
2321 2557 3.181497 ACATATGCGAGATGTTTGGTTGC 60.181 43.478 1.58 0.00 33.70 4.17
2322 2558 0.527565 ATGCGAGATGTTTGGTTGCC 59.472 50.000 0.00 0.00 0.00 4.52
2323 2559 0.537143 TGCGAGATGTTTGGTTGCCT 60.537 50.000 0.00 0.00 0.00 4.75
2324 2560 0.109597 GCGAGATGTTTGGTTGCCTG 60.110 55.000 0.00 0.00 0.00 4.85
2325 2561 0.109597 CGAGATGTTTGGTTGCCTGC 60.110 55.000 0.00 0.00 0.00 4.85
2326 2562 0.961019 GAGATGTTTGGTTGCCTGCA 59.039 50.000 0.00 0.00 0.00 4.41
2327 2563 1.547372 GAGATGTTTGGTTGCCTGCAT 59.453 47.619 0.00 0.00 0.00 3.96
2328 2564 2.754552 GAGATGTTTGGTTGCCTGCATA 59.245 45.455 0.00 0.00 0.00 3.14
2329 2565 3.368248 AGATGTTTGGTTGCCTGCATAT 58.632 40.909 0.00 0.00 0.00 1.78
2330 2566 3.131577 AGATGTTTGGTTGCCTGCATATG 59.868 43.478 0.00 0.00 0.00 1.78
2331 2567 1.549620 TGTTTGGTTGCCTGCATATGG 59.450 47.619 4.56 0.00 0.00 2.74
2332 2568 1.824230 GTTTGGTTGCCTGCATATGGA 59.176 47.619 4.56 0.00 0.00 3.41
2333 2569 1.473258 TTGGTTGCCTGCATATGGAC 58.527 50.000 4.56 0.00 0.00 4.02
2334 2570 0.625316 TGGTTGCCTGCATATGGACT 59.375 50.000 4.56 0.00 0.00 3.85
2335 2571 1.005805 TGGTTGCCTGCATATGGACTT 59.994 47.619 4.56 0.00 0.00 3.01
2336 2572 1.678101 GGTTGCCTGCATATGGACTTC 59.322 52.381 4.56 0.00 0.00 3.01
2337 2573 1.678101 GTTGCCTGCATATGGACTTCC 59.322 52.381 4.56 0.00 0.00 3.46
2338 2574 1.216064 TGCCTGCATATGGACTTCCT 58.784 50.000 4.56 0.00 36.82 3.36
2339 2575 1.134007 TGCCTGCATATGGACTTCCTG 60.134 52.381 4.56 0.00 36.82 3.86
2340 2576 1.602311 CCTGCATATGGACTTCCTGC 58.398 55.000 4.56 0.00 35.85 4.85
2341 2577 1.134007 CCTGCATATGGACTTCCTGCA 60.134 52.381 4.56 9.60 40.83 4.41
2342 2578 2.488528 CCTGCATATGGACTTCCTGCAT 60.489 50.000 10.24 0.00 41.74 3.96
2343 2579 3.220110 CTGCATATGGACTTCCTGCATT 58.780 45.455 10.24 0.00 41.74 3.56
2344 2580 4.392047 CTGCATATGGACTTCCTGCATTA 58.608 43.478 10.24 0.00 41.74 1.90
2345 2581 4.392047 TGCATATGGACTTCCTGCATTAG 58.608 43.478 4.56 0.00 39.03 1.73
2358 2594 5.002464 CCTGCATTAGGGAATCAACTTTG 57.998 43.478 0.00 0.00 43.33 2.77
2359 2595 4.142093 CCTGCATTAGGGAATCAACTTTGG 60.142 45.833 0.00 0.00 43.33 3.28
2360 2596 3.195396 TGCATTAGGGAATCAACTTTGGC 59.805 43.478 0.00 0.00 0.00 4.52
2361 2597 3.195396 GCATTAGGGAATCAACTTTGGCA 59.805 43.478 0.00 0.00 0.00 4.92
2362 2598 4.141869 GCATTAGGGAATCAACTTTGGCAT 60.142 41.667 0.00 0.00 0.00 4.40
2363 2599 5.353938 CATTAGGGAATCAACTTTGGCATG 58.646 41.667 0.00 0.00 0.00 4.06
2364 2600 2.893424 AGGGAATCAACTTTGGCATGT 58.107 42.857 0.00 0.00 0.00 3.21
2365 2601 3.242011 AGGGAATCAACTTTGGCATGTT 58.758 40.909 0.00 0.00 0.00 2.71
2366 2602 3.007182 AGGGAATCAACTTTGGCATGTTG 59.993 43.478 20.65 20.65 43.28 3.33
2367 2603 3.244181 GGGAATCAACTTTGGCATGTTGT 60.244 43.478 23.57 12.40 42.71 3.32
2368 2604 4.379652 GGAATCAACTTTGGCATGTTGTT 58.620 39.130 23.57 18.76 42.71 2.83
2369 2605 4.815846 GGAATCAACTTTGGCATGTTGTTT 59.184 37.500 23.57 21.82 42.71 2.83
2370 2606 5.277442 GGAATCAACTTTGGCATGTTGTTTG 60.277 40.000 22.82 9.01 42.71 2.93
2371 2607 3.529533 TCAACTTTGGCATGTTGTTTGG 58.470 40.909 23.57 7.42 42.71 3.28
2372 2608 3.055530 TCAACTTTGGCATGTTGTTTGGT 60.056 39.130 23.57 0.00 42.71 3.67
2373 2609 3.625649 ACTTTGGCATGTTGTTTGGTT 57.374 38.095 0.00 0.00 0.00 3.67
2374 2610 4.744795 ACTTTGGCATGTTGTTTGGTTA 57.255 36.364 0.00 0.00 0.00 2.85
2375 2611 4.438148 ACTTTGGCATGTTGTTTGGTTAC 58.562 39.130 0.00 0.00 0.00 2.50
2376 2612 3.460857 TTGGCATGTTGTTTGGTTACC 57.539 42.857 0.00 0.00 0.00 2.85
2377 2613 2.672098 TGGCATGTTGTTTGGTTACCT 58.328 42.857 2.07 0.00 0.00 3.08
2378 2614 2.363680 TGGCATGTTGTTTGGTTACCTG 59.636 45.455 2.07 0.00 0.00 4.00
2379 2615 2.403259 GCATGTTGTTTGGTTACCTGC 58.597 47.619 2.07 0.00 0.00 4.85
2380 2616 2.223923 GCATGTTGTTTGGTTACCTGCA 60.224 45.455 2.07 0.00 34.76 4.41
2381 2617 3.554752 GCATGTTGTTTGGTTACCTGCAT 60.555 43.478 2.07 0.00 34.76 3.96
2382 2618 4.630111 CATGTTGTTTGGTTACCTGCATT 58.370 39.130 2.07 0.00 0.00 3.56
2383 2619 4.052159 TGTTGTTTGGTTACCTGCATTG 57.948 40.909 2.07 0.00 0.00 2.82
2384 2620 3.449018 TGTTGTTTGGTTACCTGCATTGT 59.551 39.130 2.07 0.00 0.00 2.71
2385 2621 4.048504 GTTGTTTGGTTACCTGCATTGTC 58.951 43.478 2.07 0.00 0.00 3.18
2386 2622 3.561143 TGTTTGGTTACCTGCATTGTCT 58.439 40.909 2.07 0.00 0.00 3.41
2387 2623 3.568007 TGTTTGGTTACCTGCATTGTCTC 59.432 43.478 2.07 0.00 0.00 3.36
2388 2624 2.093306 TGGTTACCTGCATTGTCTCG 57.907 50.000 2.07 0.00 0.00 4.04
2389 2625 1.338674 TGGTTACCTGCATTGTCTCGG 60.339 52.381 2.07 0.00 0.00 4.63
2390 2626 0.727398 GTTACCTGCATTGTCTCGGC 59.273 55.000 0.00 0.00 0.00 5.54
2391 2627 0.739462 TTACCTGCATTGTCTCGGCG 60.739 55.000 0.00 0.00 0.00 6.46
2392 2628 3.869272 CCTGCATTGTCTCGGCGC 61.869 66.667 0.00 0.00 0.00 6.53
2393 2629 3.120385 CTGCATTGTCTCGGCGCA 61.120 61.111 10.83 0.00 0.00 6.09
2394 2630 2.436469 TGCATTGTCTCGGCGCAT 60.436 55.556 10.83 0.00 0.00 4.73
2395 2631 2.023741 GCATTGTCTCGGCGCATG 59.976 61.111 10.83 3.13 0.00 4.06
2396 2632 2.023741 CATTGTCTCGGCGCATGC 59.976 61.111 10.83 7.91 41.71 4.06
2397 2633 2.436469 ATTGTCTCGGCGCATGCA 60.436 55.556 19.57 0.00 45.35 3.96
2398 2634 2.039974 ATTGTCTCGGCGCATGCAA 61.040 52.632 19.57 7.15 45.35 4.08
2399 2635 2.257286 ATTGTCTCGGCGCATGCAAC 62.257 55.000 19.57 8.95 45.35 4.17
2400 2636 3.121030 GTCTCGGCGCATGCAACT 61.121 61.111 19.57 0.00 45.35 3.16
2401 2637 1.809619 GTCTCGGCGCATGCAACTA 60.810 57.895 19.57 0.42 45.35 2.24
2402 2638 1.809619 TCTCGGCGCATGCAACTAC 60.810 57.895 19.57 0.67 45.35 2.73
2403 2639 2.047750 TCGGCGCATGCAACTACA 60.048 55.556 19.57 0.00 45.35 2.74
2404 2640 2.098298 CGGCGCATGCAACTACAC 59.902 61.111 19.57 0.00 45.35 2.90
2405 2641 2.098298 GGCGCATGCAACTACACG 59.902 61.111 19.57 0.00 45.35 4.49
2406 2642 2.677003 GGCGCATGCAACTACACGT 61.677 57.895 19.57 0.00 45.35 4.49
2407 2643 1.206578 GCGCATGCAACTACACGTT 59.793 52.632 19.57 0.00 42.15 3.99
2417 2653 2.836479 ACTACACGTTGTTTGGTTGC 57.164 45.000 0.00 0.00 0.00 4.17
2418 2654 1.402613 ACTACACGTTGTTTGGTTGCC 59.597 47.619 0.00 0.00 0.00 4.52
2419 2655 0.739561 TACACGTTGTTTGGTTGCCC 59.260 50.000 0.00 0.00 0.00 5.36
2420 2656 1.587613 CACGTTGTTTGGTTGCCCG 60.588 57.895 0.00 0.00 0.00 6.13
2421 2657 2.656973 CGTTGTTTGGTTGCCCGC 60.657 61.111 0.00 0.00 0.00 6.13
2422 2658 2.496817 GTTGTTTGGTTGCCCGCA 59.503 55.556 0.00 0.00 0.00 5.69
2423 2659 1.068921 GTTGTTTGGTTGCCCGCAT 59.931 52.632 0.00 0.00 0.00 4.73
2424 2660 1.068753 TTGTTTGGTTGCCCGCATG 59.931 52.632 0.00 0.00 0.00 4.06
2425 2661 1.395045 TTGTTTGGTTGCCCGCATGA 61.395 50.000 0.00 0.00 0.00 3.07
2426 2662 1.080569 GTTTGGTTGCCCGCATGAG 60.081 57.895 0.00 0.00 0.00 2.90
2427 2663 2.274645 TTTGGTTGCCCGCATGAGG 61.275 57.895 8.78 8.78 0.00 3.86
2428 2664 2.992817 TTTGGTTGCCCGCATGAGGT 62.993 55.000 14.88 0.00 0.00 3.85
2429 2665 2.130821 TTGGTTGCCCGCATGAGGTA 62.131 55.000 14.88 1.65 0.00 3.08
2430 2666 1.152963 GGTTGCCCGCATGAGGTAT 60.153 57.895 14.88 0.00 0.00 2.73
2431 2667 1.447317 GGTTGCCCGCATGAGGTATG 61.447 60.000 14.88 0.16 39.88 2.39
2432 2668 0.463654 GTTGCCCGCATGAGGTATGA 60.464 55.000 14.88 0.00 39.21 2.15
2433 2669 0.473755 TTGCCCGCATGAGGTATGAT 59.526 50.000 14.88 0.00 39.21 2.45
2434 2670 0.473755 TGCCCGCATGAGGTATGATT 59.526 50.000 14.88 0.00 39.21 2.57
2435 2671 1.696884 TGCCCGCATGAGGTATGATTA 59.303 47.619 14.88 0.00 39.21 1.75
2436 2672 2.105649 TGCCCGCATGAGGTATGATTAA 59.894 45.455 14.88 0.00 39.21 1.40
2437 2673 2.744202 GCCCGCATGAGGTATGATTAAG 59.256 50.000 14.88 0.00 39.21 1.85
2438 2674 3.557054 GCCCGCATGAGGTATGATTAAGA 60.557 47.826 14.88 0.00 39.21 2.10
2439 2675 4.248859 CCCGCATGAGGTATGATTAAGAG 58.751 47.826 14.88 0.00 39.21 2.85
2440 2676 3.681897 CCGCATGAGGTATGATTAAGAGC 59.318 47.826 7.42 0.00 39.21 4.09
2441 2677 4.562347 CCGCATGAGGTATGATTAAGAGCT 60.562 45.833 7.42 0.00 39.21 4.09
2442 2678 5.336770 CCGCATGAGGTATGATTAAGAGCTA 60.337 44.000 7.42 0.00 39.21 3.32
2443 2679 5.804473 CGCATGAGGTATGATTAAGAGCTAG 59.196 44.000 0.00 0.00 39.21 3.42
2444 2680 5.580297 GCATGAGGTATGATTAAGAGCTAGC 59.420 44.000 6.62 6.62 39.21 3.42
2445 2681 6.695429 CATGAGGTATGATTAAGAGCTAGCA 58.305 40.000 18.83 0.00 39.21 3.49
2446 2682 6.090483 TGAGGTATGATTAAGAGCTAGCAC 57.910 41.667 18.83 11.32 0.00 4.40
2447 2683 5.835819 TGAGGTATGATTAAGAGCTAGCACT 59.164 40.000 18.83 13.88 0.00 4.40
2448 2684 6.325028 TGAGGTATGATTAAGAGCTAGCACTT 59.675 38.462 26.96 26.96 0.00 3.16
2449 2685 6.520272 AGGTATGATTAAGAGCTAGCACTTG 58.480 40.000 30.33 0.00 0.00 3.16
2450 2686 5.178438 GGTATGATTAAGAGCTAGCACTTGC 59.822 44.000 30.33 21.02 42.49 4.01
2451 2687 4.206477 TGATTAAGAGCTAGCACTTGCA 57.794 40.909 30.33 22.80 45.16 4.08
2452 2688 3.935203 TGATTAAGAGCTAGCACTTGCAC 59.065 43.478 30.33 21.46 45.16 4.57
2453 2689 3.685139 TTAAGAGCTAGCACTTGCACT 57.315 42.857 30.33 12.08 45.16 4.40
2454 2690 2.557920 AAGAGCTAGCACTTGCACTT 57.442 45.000 24.15 10.00 45.16 3.16
2455 2691 3.685139 AAGAGCTAGCACTTGCACTTA 57.315 42.857 24.15 0.00 45.16 2.24
2456 2692 3.244033 AGAGCTAGCACTTGCACTTAG 57.756 47.619 18.83 0.00 45.16 2.18
2457 2693 1.663135 GAGCTAGCACTTGCACTTAGC 59.337 52.381 18.83 11.23 45.16 3.09
2466 2702 4.800554 GCACTTAGCACACAGGGT 57.199 55.556 0.00 0.00 44.79 4.34
2467 2703 3.021451 GCACTTAGCACACAGGGTT 57.979 52.632 0.00 0.00 44.79 4.11
2468 2704 2.178912 GCACTTAGCACACAGGGTTA 57.821 50.000 0.00 0.00 44.79 2.85
2469 2705 2.500229 GCACTTAGCACACAGGGTTAA 58.500 47.619 0.00 0.00 44.79 2.01
2470 2706 2.484264 GCACTTAGCACACAGGGTTAAG 59.516 50.000 1.98 1.98 44.79 1.85
2471 2707 3.805807 GCACTTAGCACACAGGGTTAAGA 60.806 47.826 9.40 0.00 44.79 2.10
2472 2708 3.997021 CACTTAGCACACAGGGTTAAGAG 59.003 47.826 9.40 0.00 0.00 2.85
2473 2709 2.762535 TAGCACACAGGGTTAAGAGC 57.237 50.000 0.00 0.00 0.00 4.09
2474 2710 1.059913 AGCACACAGGGTTAAGAGCT 58.940 50.000 0.00 0.00 0.00 4.09
2475 2711 2.257207 AGCACACAGGGTTAAGAGCTA 58.743 47.619 0.00 0.00 0.00 3.32
2476 2712 2.234908 AGCACACAGGGTTAAGAGCTAG 59.765 50.000 0.00 0.00 0.00 3.42
2477 2713 2.622436 CACACAGGGTTAAGAGCTAGC 58.378 52.381 6.62 6.62 0.00 3.42
2478 2714 2.028112 CACACAGGGTTAAGAGCTAGCA 60.028 50.000 18.83 0.00 0.00 3.49
2479 2715 2.234908 ACACAGGGTTAAGAGCTAGCAG 59.765 50.000 18.83 0.00 0.00 4.24
2480 2716 2.497675 CACAGGGTTAAGAGCTAGCAGA 59.502 50.000 18.83 0.00 0.00 4.26
2481 2717 3.055819 CACAGGGTTAAGAGCTAGCAGAA 60.056 47.826 18.83 1.93 0.00 3.02
2482 2718 3.196685 ACAGGGTTAAGAGCTAGCAGAAG 59.803 47.826 18.83 0.00 0.00 2.85
2483 2719 3.449018 CAGGGTTAAGAGCTAGCAGAAGA 59.551 47.826 18.83 0.00 0.00 2.87
2484 2720 4.081420 CAGGGTTAAGAGCTAGCAGAAGAA 60.081 45.833 18.83 1.17 0.00 2.52
2485 2721 4.161377 AGGGTTAAGAGCTAGCAGAAGAAG 59.839 45.833 18.83 0.00 0.00 2.85
2486 2722 4.438148 GGTTAAGAGCTAGCAGAAGAAGG 58.562 47.826 18.83 0.00 0.00 3.46
2487 2723 4.438148 GTTAAGAGCTAGCAGAAGAAGGG 58.562 47.826 18.83 0.00 0.00 3.95
2488 2724 2.246091 AGAGCTAGCAGAAGAAGGGT 57.754 50.000 18.83 0.00 0.00 4.34
2489 2725 1.830477 AGAGCTAGCAGAAGAAGGGTG 59.170 52.381 18.83 0.00 0.00 4.61
2490 2726 1.827969 GAGCTAGCAGAAGAAGGGTGA 59.172 52.381 18.83 0.00 0.00 4.02
2491 2727 1.830477 AGCTAGCAGAAGAAGGGTGAG 59.170 52.381 18.83 0.00 0.00 3.51
2492 2728 1.827969 GCTAGCAGAAGAAGGGTGAGA 59.172 52.381 10.63 0.00 0.00 3.27
2493 2729 2.234908 GCTAGCAGAAGAAGGGTGAGAA 59.765 50.000 10.63 0.00 0.00 2.87
2494 2730 3.678529 GCTAGCAGAAGAAGGGTGAGAAG 60.679 52.174 10.63 0.00 0.00 2.85
2495 2731 2.614259 AGCAGAAGAAGGGTGAGAAGA 58.386 47.619 0.00 0.00 0.00 2.87
2496 2732 2.975489 AGCAGAAGAAGGGTGAGAAGAA 59.025 45.455 0.00 0.00 0.00 2.52
2497 2733 3.392616 AGCAGAAGAAGGGTGAGAAGAAA 59.607 43.478 0.00 0.00 0.00 2.52
2498 2734 4.042684 AGCAGAAGAAGGGTGAGAAGAAAT 59.957 41.667 0.00 0.00 0.00 2.17
2499 2735 4.155644 GCAGAAGAAGGGTGAGAAGAAATG 59.844 45.833 0.00 0.00 0.00 2.32
2500 2736 4.155644 CAGAAGAAGGGTGAGAAGAAATGC 59.844 45.833 0.00 0.00 0.00 3.56
2501 2737 3.795688 AGAAGGGTGAGAAGAAATGCA 57.204 42.857 0.00 0.00 0.00 3.96
2502 2738 3.683802 AGAAGGGTGAGAAGAAATGCAG 58.316 45.455 0.00 0.00 0.00 4.41
2503 2739 3.073650 AGAAGGGTGAGAAGAAATGCAGT 59.926 43.478 0.00 0.00 0.00 4.40
2504 2740 2.787994 AGGGTGAGAAGAAATGCAGTG 58.212 47.619 0.00 0.00 0.00 3.66
2505 2741 2.107204 AGGGTGAGAAGAAATGCAGTGT 59.893 45.455 0.00 0.00 0.00 3.55
2506 2742 2.227388 GGGTGAGAAGAAATGCAGTGTG 59.773 50.000 0.00 0.00 0.00 3.82
2507 2743 2.351157 GGTGAGAAGAAATGCAGTGTGC 60.351 50.000 0.00 0.00 45.29 4.57
2526 2762 3.770040 CCGGACCATGGCGACTGA 61.770 66.667 13.04 0.00 0.00 3.41
2527 2763 2.202797 CGGACCATGGCGACTGAG 60.203 66.667 13.04 0.00 0.00 3.35
2528 2764 2.187946 GGACCATGGCGACTGAGG 59.812 66.667 13.04 0.00 0.00 3.86
2529 2765 2.660064 GGACCATGGCGACTGAGGT 61.660 63.158 13.04 0.00 34.76 3.85
2530 2766 1.448540 GACCATGGCGACTGAGGTG 60.449 63.158 13.04 0.00 31.57 4.00
2531 2767 2.124983 CCATGGCGACTGAGGTGG 60.125 66.667 0.00 0.00 0.00 4.61
2532 2768 2.659063 CCATGGCGACTGAGGTGGA 61.659 63.158 0.00 0.00 0.00 4.02
2533 2769 1.524002 CATGGCGACTGAGGTGGAT 59.476 57.895 0.00 0.00 0.00 3.41
2534 2770 0.752658 CATGGCGACTGAGGTGGATA 59.247 55.000 0.00 0.00 0.00 2.59
2535 2771 1.043816 ATGGCGACTGAGGTGGATAG 58.956 55.000 0.00 0.00 0.00 2.08
2536 2772 0.324368 TGGCGACTGAGGTGGATAGT 60.324 55.000 0.00 0.00 0.00 2.12
2537 2773 0.103208 GGCGACTGAGGTGGATAGTG 59.897 60.000 0.00 0.00 0.00 2.74
2538 2774 0.103208 GCGACTGAGGTGGATAGTGG 59.897 60.000 0.00 0.00 0.00 4.00
2539 2775 1.475403 CGACTGAGGTGGATAGTGGT 58.525 55.000 0.00 0.00 0.00 4.16
2540 2776 1.405821 CGACTGAGGTGGATAGTGGTC 59.594 57.143 0.00 0.00 0.00 4.02
2541 2777 1.405821 GACTGAGGTGGATAGTGGTCG 59.594 57.143 0.00 0.00 0.00 4.79
2542 2778 1.272536 ACTGAGGTGGATAGTGGTCGT 60.273 52.381 0.00 0.00 0.00 4.34
2543 2779 1.135139 CTGAGGTGGATAGTGGTCGTG 59.865 57.143 0.00 0.00 0.00 4.35
2544 2780 0.460311 GAGGTGGATAGTGGTCGTGG 59.540 60.000 0.00 0.00 0.00 4.94
2545 2781 1.153429 GGTGGATAGTGGTCGTGGC 60.153 63.158 0.00 0.00 0.00 5.01
2546 2782 1.518572 GTGGATAGTGGTCGTGGCG 60.519 63.158 0.00 0.00 0.00 5.69
2547 2783 2.585247 GGATAGTGGTCGTGGCGC 60.585 66.667 0.00 0.00 0.00 6.53
2548 2784 2.585247 GATAGTGGTCGTGGCGCC 60.585 66.667 22.73 22.73 0.00 6.53
2549 2785 3.075005 ATAGTGGTCGTGGCGCCT 61.075 61.111 29.70 6.93 0.00 5.52
2550 2786 2.573609 GATAGTGGTCGTGGCGCCTT 62.574 60.000 29.70 5.34 0.00 4.35
2551 2787 2.852495 ATAGTGGTCGTGGCGCCTTG 62.852 60.000 29.70 19.91 0.00 3.61
2553 2789 4.980805 TGGTCGTGGCGCCTTGTC 62.981 66.667 29.70 16.72 0.00 3.18
2558 2794 4.980805 GTGGCGCCTTGTCCGACA 62.981 66.667 29.70 0.00 42.22 4.35
2559 2795 4.015406 TGGCGCCTTGTCCGACAT 62.015 61.111 29.70 0.00 39.08 3.06
2560 2796 3.499737 GGCGCCTTGTCCGACATG 61.500 66.667 22.15 4.74 32.95 3.21
2561 2797 2.434185 GCGCCTTGTCCGACATGA 60.434 61.111 14.43 0.00 0.00 3.07
2562 2798 2.740714 GCGCCTTGTCCGACATGAC 61.741 63.158 14.43 3.72 35.77 3.06
2563 2799 2.444624 CGCCTTGTCCGACATGACG 61.445 63.158 14.43 10.68 38.11 4.35
2564 2800 1.080093 GCCTTGTCCGACATGACGA 60.080 57.895 19.00 2.64 38.11 4.20
2565 2801 1.078759 GCCTTGTCCGACATGACGAG 61.079 60.000 19.00 7.95 43.57 4.18
2566 2802 1.078759 CCTTGTCCGACATGACGAGC 61.079 60.000 19.00 10.99 42.90 5.03
2567 2803 0.388520 CTTGTCCGACATGACGAGCA 60.389 55.000 19.00 13.27 39.31 4.26
2568 2804 0.246360 TTGTCCGACATGACGAGCAT 59.754 50.000 19.00 0.00 38.11 3.79
2579 2815 2.885113 CGAGCATGGAGTCGTGGA 59.115 61.111 0.00 0.00 0.00 4.02
2580 2816 1.517257 CGAGCATGGAGTCGTGGAC 60.517 63.158 0.00 0.00 0.00 4.02
2581 2817 1.517257 GAGCATGGAGTCGTGGACG 60.517 63.158 0.00 0.00 37.67 4.79
2626 2862 2.562912 GACACCGTCGGCGAACTA 59.437 61.111 12.93 0.00 41.33 2.24
2627 2863 1.513586 GACACCGTCGGCGAACTAG 60.514 63.158 12.93 5.05 41.33 2.57
2628 2864 2.192608 GACACCGTCGGCGAACTAGT 62.193 60.000 12.93 8.72 41.33 2.57
2629 2865 1.513586 CACCGTCGGCGAACTAGTC 60.514 63.158 12.93 0.00 41.33 2.59
2637 2873 2.178521 CGAACTAGTCGCGGTGCT 59.821 61.111 6.13 5.06 44.14 4.40
2638 2874 1.868251 CGAACTAGTCGCGGTGCTC 60.868 63.158 6.13 0.00 44.14 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.807977 AGCATAGAACTGACTTCTTTCAAAA 57.192 32.000 0.00 0.00 40.04 2.44
1 2 7.807977 AAGCATAGAACTGACTTCTTTCAAA 57.192 32.000 0.00 0.00 40.04 2.69
2 3 7.642669 CAAAGCATAGAACTGACTTCTTTCAA 58.357 34.615 0.00 0.00 40.04 2.69
3 4 6.293626 GCAAAGCATAGAACTGACTTCTTTCA 60.294 38.462 0.00 0.00 40.04 2.69
4 5 6.072783 AGCAAAGCATAGAACTGACTTCTTTC 60.073 38.462 0.00 0.00 40.04 2.62
5 6 5.767168 AGCAAAGCATAGAACTGACTTCTTT 59.233 36.000 0.00 0.00 40.04 2.52
6 7 5.312079 AGCAAAGCATAGAACTGACTTCTT 58.688 37.500 0.00 0.00 40.04 2.52
7 8 4.904241 AGCAAAGCATAGAACTGACTTCT 58.096 39.130 0.00 0.00 42.33 2.85
8 9 5.388944 CAAGCAAAGCATAGAACTGACTTC 58.611 41.667 0.00 0.00 0.00 3.01
9 10 4.320788 GCAAGCAAAGCATAGAACTGACTT 60.321 41.667 0.00 0.00 0.00 3.01
10 11 3.190118 GCAAGCAAAGCATAGAACTGACT 59.810 43.478 0.00 0.00 0.00 3.41
11 12 3.190118 AGCAAGCAAAGCATAGAACTGAC 59.810 43.478 0.00 0.00 0.00 3.51
12 13 3.415212 AGCAAGCAAAGCATAGAACTGA 58.585 40.909 0.00 0.00 0.00 3.41
13 14 3.844577 AGCAAGCAAAGCATAGAACTG 57.155 42.857 0.00 0.00 0.00 3.16
14 15 3.613432 GCAAGCAAGCAAAGCATAGAACT 60.613 43.478 0.00 0.00 0.00 3.01
15 16 2.665052 GCAAGCAAGCAAAGCATAGAAC 59.335 45.455 0.00 0.00 0.00 3.01
16 17 2.559668 AGCAAGCAAGCAAAGCATAGAA 59.440 40.909 3.19 0.00 36.85 2.10
17 18 2.165167 AGCAAGCAAGCAAAGCATAGA 58.835 42.857 3.19 0.00 36.85 1.98
18 19 2.649331 AGCAAGCAAGCAAAGCATAG 57.351 45.000 3.19 0.00 36.85 2.23
19 20 3.061322 CAAAGCAAGCAAGCAAAGCATA 58.939 40.909 3.19 0.00 36.85 3.14
20 21 1.871039 CAAAGCAAGCAAGCAAAGCAT 59.129 42.857 3.19 0.00 36.85 3.79
21 22 1.292061 CAAAGCAAGCAAGCAAAGCA 58.708 45.000 3.19 0.00 36.85 3.91
22 23 1.292992 ACAAAGCAAGCAAGCAAAGC 58.707 45.000 3.19 0.00 36.85 3.51
23 24 4.300803 TCATACAAAGCAAGCAAGCAAAG 58.699 39.130 3.19 0.00 36.85 2.77
24 25 4.319139 TCATACAAAGCAAGCAAGCAAA 57.681 36.364 3.19 0.00 36.85 3.68
25 26 4.524316 ATCATACAAAGCAAGCAAGCAA 57.476 36.364 3.19 0.00 36.85 3.91
26 27 4.239304 CAATCATACAAAGCAAGCAAGCA 58.761 39.130 3.19 0.00 36.85 3.91
27 28 3.061697 GCAATCATACAAAGCAAGCAAGC 59.938 43.478 0.00 0.00 0.00 4.01
28 29 3.302434 CGCAATCATACAAAGCAAGCAAG 59.698 43.478 0.00 0.00 0.00 4.01
29 30 3.057666 TCGCAATCATACAAAGCAAGCAA 60.058 39.130 0.00 0.00 0.00 3.91
30 31 2.487372 TCGCAATCATACAAAGCAAGCA 59.513 40.909 0.00 0.00 0.00 3.91
31 32 3.103738 CTCGCAATCATACAAAGCAAGC 58.896 45.455 0.00 0.00 0.00 4.01
32 33 3.103738 GCTCGCAATCATACAAAGCAAG 58.896 45.455 0.00 0.00 0.00 4.01
33 34 2.476018 CGCTCGCAATCATACAAAGCAA 60.476 45.455 0.00 0.00 0.00 3.91
34 35 1.062440 CGCTCGCAATCATACAAAGCA 59.938 47.619 0.00 0.00 0.00 3.91
35 36 1.595489 CCGCTCGCAATCATACAAAGC 60.595 52.381 0.00 0.00 0.00 3.51
36 37 1.665679 ACCGCTCGCAATCATACAAAG 59.334 47.619 0.00 0.00 0.00 2.77
37 38 1.732941 ACCGCTCGCAATCATACAAA 58.267 45.000 0.00 0.00 0.00 2.83
38 39 2.588027 TACCGCTCGCAATCATACAA 57.412 45.000 0.00 0.00 0.00 2.41
39 40 2.403259 CATACCGCTCGCAATCATACA 58.597 47.619 0.00 0.00 0.00 2.29
40 41 1.126846 GCATACCGCTCGCAATCATAC 59.873 52.381 0.00 0.00 37.77 2.39
41 42 1.428448 GCATACCGCTCGCAATCATA 58.572 50.000 0.00 0.00 37.77 2.15
42 43 2.238353 GCATACCGCTCGCAATCAT 58.762 52.632 0.00 0.00 37.77 2.45
43 44 3.717899 GCATACCGCTCGCAATCA 58.282 55.556 0.00 0.00 37.77 2.57
52 53 3.186613 GGCTAAGAAACATAGCATACCGC 59.813 47.826 7.73 0.00 46.01 5.68
53 54 4.377021 TGGCTAAGAAACATAGCATACCG 58.623 43.478 7.73 0.00 46.01 4.02
54 55 6.884280 ATTGGCTAAGAAACATAGCATACC 57.116 37.500 7.73 0.00 46.01 2.73
55 56 8.507249 CCTAATTGGCTAAGAAACATAGCATAC 58.493 37.037 7.73 0.00 46.01 2.39
56 57 8.217799 ACCTAATTGGCTAAGAAACATAGCATA 58.782 33.333 7.73 0.00 46.01 3.14
57 58 7.062957 ACCTAATTGGCTAAGAAACATAGCAT 58.937 34.615 7.73 0.00 46.01 3.79
58 59 6.423182 ACCTAATTGGCTAAGAAACATAGCA 58.577 36.000 7.73 0.00 46.01 3.49
59 60 6.944234 ACCTAATTGGCTAAGAAACATAGC 57.056 37.500 0.00 0.00 43.99 2.97
60 61 9.046296 CAGTACCTAATTGGCTAAGAAACATAG 57.954 37.037 0.00 0.00 40.22 2.23
61 62 7.990886 CCAGTACCTAATTGGCTAAGAAACATA 59.009 37.037 0.00 0.00 40.22 2.29
62 63 6.828785 CCAGTACCTAATTGGCTAAGAAACAT 59.171 38.462 0.00 0.00 40.22 2.71
63 64 6.013206 TCCAGTACCTAATTGGCTAAGAAACA 60.013 38.462 0.00 0.00 40.22 2.83
64 65 6.412214 TCCAGTACCTAATTGGCTAAGAAAC 58.588 40.000 0.00 0.00 40.22 2.78
65 66 6.630203 TCCAGTACCTAATTGGCTAAGAAA 57.370 37.500 0.00 0.00 40.22 2.52
66 67 6.824958 ATCCAGTACCTAATTGGCTAAGAA 57.175 37.500 0.00 0.00 40.22 2.52
67 68 7.956315 AGATATCCAGTACCTAATTGGCTAAGA 59.044 37.037 0.00 0.00 40.22 2.10
92 93 6.476380 AGCACATCACAATTTTGTACAAACAG 59.524 34.615 20.43 14.68 39.91 3.16
120 121 1.202076 GCAAGTAATCGCCAGCTGTTC 60.202 52.381 13.81 2.93 0.00 3.18
130 131 4.260784 GGAAGGCACATAAGCAAGTAATCG 60.261 45.833 0.00 0.00 35.83 3.34
139 140 2.436417 TCACAAGGAAGGCACATAAGC 58.564 47.619 0.00 0.00 0.00 3.09
143 144 3.057315 CGATTTTCACAAGGAAGGCACAT 60.057 43.478 0.00 0.00 36.72 3.21
144 145 2.293122 CGATTTTCACAAGGAAGGCACA 59.707 45.455 0.00 0.00 36.72 4.57
190 193 2.668550 AAACCCGGCTGACTTCGC 60.669 61.111 0.00 0.00 0.00 4.70
243 246 2.034339 CGTGACGACCTACAACAACAAC 60.034 50.000 0.00 0.00 0.00 3.32
268 271 0.180642 CTGCATCATGAGACAGCCCT 59.819 55.000 13.16 0.00 0.00 5.19
339 343 4.373116 GGCTTCCACGCTCACCGA 62.373 66.667 0.00 0.00 41.02 4.69
366 370 1.743091 GCTCTGCTGCTGCTATGTTCT 60.743 52.381 17.00 0.00 40.48 3.01
407 413 4.790962 AGCGAGCGACCGGGAGTA 62.791 66.667 6.32 0.00 0.00 2.59
509 517 4.722700 ATCAAAGGCCGCGGTGCT 62.723 61.111 28.70 8.21 0.00 4.40
517 533 1.109323 CGGGATTGGGATCAAAGGCC 61.109 60.000 0.00 0.00 36.36 5.19
530 546 3.378602 GGGTTTTGCGGCGGGATT 61.379 61.111 9.78 0.00 0.00 3.01
550 566 0.395311 CTCTGGGATGCTGCCATTGT 60.395 55.000 0.00 0.00 37.20 2.71
754 787 1.303074 ACACGTGGTCCTCGCTCTA 60.303 57.895 21.57 0.00 0.00 2.43
806 842 0.527817 GTCGTAGATCACCCTTGCCG 60.528 60.000 0.00 0.00 40.67 5.69
857 893 3.311110 GACAGCACCTCCCCGTGA 61.311 66.667 0.00 0.00 35.68 4.35
873 912 1.138883 CTCTGTCGGCGATTTCGGA 59.861 57.895 14.79 10.18 40.23 4.55
902 941 3.628646 GATGGGTCCTTGCTGGCGT 62.629 63.158 0.00 0.00 35.26 5.68
904 943 2.440980 GGATGGGTCCTTGCTGGC 60.441 66.667 0.00 0.00 41.60 4.85
905 944 0.466922 GATGGATGGGTCCTTGCTGG 60.467 60.000 0.00 0.00 45.32 4.85
906 945 0.466922 GGATGGATGGGTCCTTGCTG 60.467 60.000 0.00 0.00 45.32 4.41
907 946 0.625683 AGGATGGATGGGTCCTTGCT 60.626 55.000 0.00 0.00 42.09 3.91
908 947 1.925888 AGGATGGATGGGTCCTTGC 59.074 57.895 0.00 0.00 42.09 4.01
911 950 2.532854 CGAAGGATGGATGGGTCCT 58.467 57.895 0.00 0.00 46.63 3.85
928 979 1.196354 CTTGAGCTGCTTGTTTCTCCG 59.804 52.381 2.53 0.00 0.00 4.63
989 1040 3.458872 TCAATCATGAGGCGGTCAC 57.541 52.632 0.09 0.00 38.28 3.67
1090 1144 3.146066 CCGTGTCTCTCCATTTTCCAAA 58.854 45.455 0.00 0.00 0.00 3.28
1102 1156 1.305381 CTTCCTCCCCCGTGTCTCT 60.305 63.158 0.00 0.00 0.00 3.10
1103 1157 3.020237 GCTTCCTCCCCCGTGTCTC 62.020 68.421 0.00 0.00 0.00 3.36
1107 1161 3.003173 TCTGCTTCCTCCCCCGTG 61.003 66.667 0.00 0.00 0.00 4.94
1168 1222 4.214383 CCGCATCGCAAGCACGAG 62.214 66.667 0.00 0.00 46.69 4.18
1323 1377 1.202698 CCATTCTCCTCATCGGGGTTC 60.203 57.143 0.00 0.00 33.68 3.62
1343 1397 4.864247 CCAGTAAATGCTTAACCATGTTGC 59.136 41.667 0.00 0.00 0.00 4.17
1345 1399 5.047377 CCACCAGTAAATGCTTAACCATGTT 60.047 40.000 0.00 0.00 0.00 2.71
1402 1456 2.159310 AGAGACTAGCTTCGCACATCAC 60.159 50.000 0.00 0.00 0.00 3.06
1407 1461 0.109086 TGCAGAGACTAGCTTCGCAC 60.109 55.000 0.00 0.00 31.54 5.34
1416 1470 6.406692 ACAGTAAGACTTTTGCAGAGACTA 57.593 37.500 6.21 0.00 0.00 2.59
1418 1472 4.149046 CGACAGTAAGACTTTTGCAGAGAC 59.851 45.833 6.21 0.68 0.00 3.36
1631 1685 2.673368 CCGGAATGAGCACACTAAACTC 59.327 50.000 0.00 0.00 0.00 3.01
1825 1882 4.020751 ACCAGATTCATCTCATATGGTCGG 60.021 45.833 2.13 0.00 34.22 4.79
1852 1909 7.519032 AAACCAGATTCATCGGTTCTAAAAA 57.481 32.000 13.12 0.00 40.30 1.94
1853 1910 8.801882 ATAAACCAGATTCATCGGTTCTAAAA 57.198 30.769 13.12 3.07 40.30 1.52
1855 1912 9.706691 GATATAAACCAGATTCATCGGTTCTAA 57.293 33.333 13.12 6.30 40.30 2.10
1856 1913 9.090103 AGATATAAACCAGATTCATCGGTTCTA 57.910 33.333 13.12 9.96 40.30 2.10
1857 1914 7.875041 CAGATATAAACCAGATTCATCGGTTCT 59.125 37.037 13.12 6.43 40.30 3.01
1858 1915 7.360438 GCAGATATAAACCAGATTCATCGGTTC 60.360 40.741 13.12 4.88 40.30 3.62
1859 1916 6.428159 GCAGATATAAACCAGATTCATCGGTT 59.572 38.462 9.09 9.09 41.73 4.44
1860 1917 5.934625 GCAGATATAAACCAGATTCATCGGT 59.065 40.000 0.00 0.00 36.01 4.69
1861 1918 6.169094 AGCAGATATAAACCAGATTCATCGG 58.831 40.000 0.00 0.00 0.00 4.18
1862 1919 8.939201 ATAGCAGATATAAACCAGATTCATCG 57.061 34.615 0.00 0.00 0.00 3.84
1965 2028 3.163594 GCAAGTGCATTAGTTTGTAGCG 58.836 45.455 0.00 0.00 41.59 4.26
1992 2218 9.988815 TCTCATTAAAATCTATCACTTAGCCTC 57.011 33.333 0.00 0.00 0.00 4.70
2078 2304 9.872757 CGTATACCCAATTGACAAACATTATAC 57.127 33.333 7.12 5.26 0.00 1.47
2087 2313 4.289238 ACACCGTATACCCAATTGACAA 57.711 40.909 7.12 0.00 0.00 3.18
2100 2326 5.005740 TGTCTACAACAGAGTACACCGTAT 58.994 41.667 0.00 0.00 32.51 3.06
2167 2403 4.974645 TTAAGAGGTTGCGGATATGGAT 57.025 40.909 0.00 0.00 0.00 3.41
2177 2413 6.338146 AGTCCAAAACTTTTTAAGAGGTTGC 58.662 36.000 0.00 0.00 33.03 4.17
2200 2436 3.503748 CCAAACAGGCCTTTAGAGTGAAG 59.496 47.826 0.00 0.00 0.00 3.02
2212 2448 1.109323 AGACTGCAACCAAACAGGCC 61.109 55.000 0.00 0.00 43.36 5.19
2213 2449 0.746659 AAGACTGCAACCAAACAGGC 59.253 50.000 0.00 0.00 42.61 4.85
2214 2450 2.023673 TCAAGACTGCAACCAAACAGG 58.976 47.619 0.00 0.00 45.67 4.00
2215 2451 3.119531 TGTTCAAGACTGCAACCAAACAG 60.120 43.478 0.00 0.00 39.86 3.16
2216 2452 2.822561 TGTTCAAGACTGCAACCAAACA 59.177 40.909 0.00 0.00 0.00 2.83
2217 2453 3.119495 ACTGTTCAAGACTGCAACCAAAC 60.119 43.478 0.00 0.00 0.00 2.93
2218 2454 3.088532 ACTGTTCAAGACTGCAACCAAA 58.911 40.909 0.00 0.00 0.00 3.28
2219 2455 2.722094 ACTGTTCAAGACTGCAACCAA 58.278 42.857 0.00 0.00 0.00 3.67
2220 2456 2.418368 ACTGTTCAAGACTGCAACCA 57.582 45.000 0.00 0.00 0.00 3.67
2221 2457 2.548480 GGTACTGTTCAAGACTGCAACC 59.452 50.000 0.00 0.00 32.93 3.77
2222 2458 3.467803 AGGTACTGTTCAAGACTGCAAC 58.532 45.455 0.00 0.00 37.18 4.17
2223 2459 3.838244 AGGTACTGTTCAAGACTGCAA 57.162 42.857 0.00 0.00 37.18 4.08
2237 2473 1.001520 TGTGTATGCAACGCAGGTACT 59.998 47.619 10.05 0.00 43.60 2.73
2238 2474 1.434555 TGTGTATGCAACGCAGGTAC 58.565 50.000 10.05 0.00 43.60 3.34
2239 2475 3.917072 TGTGTATGCAACGCAGGTA 57.083 47.368 10.05 0.00 43.60 3.08
2240 2476 4.789977 TGTGTATGCAACGCAGGT 57.210 50.000 10.05 0.00 43.60 4.00
2244 2480 2.476185 GGTTGAGATGTGTATGCAACGC 60.476 50.000 0.00 0.00 39.63 4.84
2245 2481 2.095853 GGGTTGAGATGTGTATGCAACG 59.904 50.000 0.00 0.00 39.63 4.10
2246 2482 3.081061 TGGGTTGAGATGTGTATGCAAC 58.919 45.455 0.00 0.00 38.40 4.17
2247 2483 3.346315 CTGGGTTGAGATGTGTATGCAA 58.654 45.455 0.00 0.00 0.00 4.08
2248 2484 2.940971 GCTGGGTTGAGATGTGTATGCA 60.941 50.000 0.00 0.00 0.00 3.96
2249 2485 1.672881 GCTGGGTTGAGATGTGTATGC 59.327 52.381 0.00 0.00 0.00 3.14
2250 2486 2.292267 GGCTGGGTTGAGATGTGTATG 58.708 52.381 0.00 0.00 0.00 2.39
2251 2487 1.915489 TGGCTGGGTTGAGATGTGTAT 59.085 47.619 0.00 0.00 0.00 2.29
2252 2488 1.278985 CTGGCTGGGTTGAGATGTGTA 59.721 52.381 0.00 0.00 0.00 2.90
2253 2489 0.037303 CTGGCTGGGTTGAGATGTGT 59.963 55.000 0.00 0.00 0.00 3.72
2254 2490 0.679002 CCTGGCTGGGTTGAGATGTG 60.679 60.000 1.84 0.00 0.00 3.21
2255 2491 1.687612 CCTGGCTGGGTTGAGATGT 59.312 57.895 1.84 0.00 0.00 3.06
2256 2492 1.751927 GCCTGGCTGGGTTGAGATG 60.752 63.158 12.43 0.00 36.00 2.90
2257 2493 1.927527 AGCCTGGCTGGGTTGAGAT 60.928 57.895 22.71 0.00 45.67 2.75
2258 2494 2.530151 AGCCTGGCTGGGTTGAGA 60.530 61.111 22.71 0.00 45.67 3.27
2264 2500 0.540365 TTTTTCAGAGCCTGGCTGGG 60.540 55.000 28.82 17.59 39.88 4.45
2265 2501 3.040965 TTTTTCAGAGCCTGGCTGG 57.959 52.632 28.82 17.97 39.88 4.85
2280 2516 3.081061 TGTCGCATATGAGGCTGTTTTT 58.919 40.909 12.39 0.00 0.00 1.94
2281 2517 2.710377 TGTCGCATATGAGGCTGTTTT 58.290 42.857 12.39 0.00 0.00 2.43
2282 2518 2.401583 TGTCGCATATGAGGCTGTTT 57.598 45.000 12.39 0.00 0.00 2.83
2283 2519 2.627515 ATGTCGCATATGAGGCTGTT 57.372 45.000 12.39 0.00 0.00 3.16
2284 2520 3.593096 CATATGTCGCATATGAGGCTGT 58.407 45.455 23.84 4.03 34.74 4.40
2285 2521 2.350804 GCATATGTCGCATATGAGGCTG 59.649 50.000 28.52 13.61 34.74 4.85
2286 2522 2.625737 GCATATGTCGCATATGAGGCT 58.374 47.619 28.52 0.00 34.74 4.58
2287 2523 1.325640 CGCATATGTCGCATATGAGGC 59.674 52.381 28.52 18.74 34.74 4.70
2288 2524 2.856557 CTCGCATATGTCGCATATGAGG 59.143 50.000 28.52 21.97 34.74 3.86
2289 2525 3.762779 TCTCGCATATGTCGCATATGAG 58.237 45.455 28.52 26.15 34.74 2.90
2290 2526 3.848272 TCTCGCATATGTCGCATATGA 57.152 42.857 28.52 16.14 34.74 2.15
2291 2527 3.861689 ACATCTCGCATATGTCGCATATG 59.138 43.478 23.84 23.84 32.02 1.78
2292 2528 4.115401 ACATCTCGCATATGTCGCATAT 57.885 40.909 12.72 6.54 32.02 1.78
2293 2529 3.575965 ACATCTCGCATATGTCGCATA 57.424 42.857 12.72 2.73 32.02 3.14
2294 2530 2.445565 ACATCTCGCATATGTCGCAT 57.554 45.000 12.72 6.41 32.02 4.73
2295 2531 2.223537 AACATCTCGCATATGTCGCA 57.776 45.000 12.72 4.77 36.56 5.10
2296 2532 2.348872 CCAAACATCTCGCATATGTCGC 60.349 50.000 12.72 0.00 36.56 5.19
2297 2533 2.866156 ACCAAACATCTCGCATATGTCG 59.134 45.455 4.29 8.71 36.56 4.35
2298 2534 4.591202 CAACCAAACATCTCGCATATGTC 58.409 43.478 4.29 0.00 36.56 3.06
2299 2535 3.181497 GCAACCAAACATCTCGCATATGT 60.181 43.478 4.29 0.00 39.22 2.29
2300 2536 3.365832 GCAACCAAACATCTCGCATATG 58.634 45.455 0.00 0.00 0.00 1.78
2301 2537 2.358898 GGCAACCAAACATCTCGCATAT 59.641 45.455 0.00 0.00 0.00 1.78
2302 2538 1.742831 GGCAACCAAACATCTCGCATA 59.257 47.619 0.00 0.00 0.00 3.14
2303 2539 0.527565 GGCAACCAAACATCTCGCAT 59.472 50.000 0.00 0.00 0.00 4.73
2304 2540 0.537143 AGGCAACCAAACATCTCGCA 60.537 50.000 0.00 0.00 37.17 5.10
2305 2541 0.109597 CAGGCAACCAAACATCTCGC 60.110 55.000 0.00 0.00 37.17 5.03
2306 2542 0.109597 GCAGGCAACCAAACATCTCG 60.110 55.000 0.00 0.00 37.17 4.04
2307 2543 0.961019 TGCAGGCAACCAAACATCTC 59.039 50.000 0.00 0.00 37.17 2.75
2308 2544 1.636148 ATGCAGGCAACCAAACATCT 58.364 45.000 0.00 0.00 37.17 2.90
2309 2545 3.450578 CATATGCAGGCAACCAAACATC 58.549 45.455 0.00 0.00 37.17 3.06
2310 2546 2.168936 CCATATGCAGGCAACCAAACAT 59.831 45.455 0.00 0.00 37.17 2.71
2311 2547 1.549620 CCATATGCAGGCAACCAAACA 59.450 47.619 0.00 0.00 37.17 2.83
2312 2548 1.824230 TCCATATGCAGGCAACCAAAC 59.176 47.619 0.00 0.00 37.17 2.93
2313 2549 1.824230 GTCCATATGCAGGCAACCAAA 59.176 47.619 0.00 0.00 37.17 3.28
2314 2550 1.005805 AGTCCATATGCAGGCAACCAA 59.994 47.619 0.00 0.00 37.17 3.67
2315 2551 0.625316 AGTCCATATGCAGGCAACCA 59.375 50.000 0.00 0.00 37.17 3.67
2316 2552 1.678101 GAAGTCCATATGCAGGCAACC 59.322 52.381 0.00 0.00 37.17 3.77
2317 2553 1.678101 GGAAGTCCATATGCAGGCAAC 59.322 52.381 0.00 0.00 35.64 4.17
2318 2554 1.565759 AGGAAGTCCATATGCAGGCAA 59.434 47.619 0.00 0.00 38.89 4.52
2319 2555 1.134007 CAGGAAGTCCATATGCAGGCA 60.134 52.381 0.00 0.00 38.89 4.75
2320 2556 1.602311 CAGGAAGTCCATATGCAGGC 58.398 55.000 0.00 0.00 38.89 4.85
2321 2557 1.134007 TGCAGGAAGTCCATATGCAGG 60.134 52.381 8.29 0.00 39.03 4.85
2322 2558 2.336945 TGCAGGAAGTCCATATGCAG 57.663 50.000 8.29 0.00 39.03 4.41
2323 2559 3.301794 AATGCAGGAAGTCCATATGCA 57.698 42.857 13.32 13.32 44.98 3.96
2336 2572 4.142093 CCAAAGTTGATTCCCTAATGCAGG 60.142 45.833 0.00 0.00 45.07 4.85
2337 2573 4.678840 GCCAAAGTTGATTCCCTAATGCAG 60.679 45.833 0.00 0.00 0.00 4.41
2338 2574 3.195396 GCCAAAGTTGATTCCCTAATGCA 59.805 43.478 0.00 0.00 0.00 3.96
2339 2575 3.195396 TGCCAAAGTTGATTCCCTAATGC 59.805 43.478 0.00 0.00 0.00 3.56
2340 2576 5.105228 ACATGCCAAAGTTGATTCCCTAATG 60.105 40.000 0.00 0.00 0.00 1.90
2341 2577 5.025453 ACATGCCAAAGTTGATTCCCTAAT 58.975 37.500 0.00 0.00 0.00 1.73
2342 2578 4.415596 ACATGCCAAAGTTGATTCCCTAA 58.584 39.130 0.00 0.00 0.00 2.69
2343 2579 4.046286 ACATGCCAAAGTTGATTCCCTA 57.954 40.909 0.00 0.00 0.00 3.53
2344 2580 2.893424 ACATGCCAAAGTTGATTCCCT 58.107 42.857 0.00 0.00 0.00 4.20
2345 2581 3.244181 ACAACATGCCAAAGTTGATTCCC 60.244 43.478 17.00 0.00 46.01 3.97
2346 2582 3.993920 ACAACATGCCAAAGTTGATTCC 58.006 40.909 17.00 0.00 46.01 3.01
2347 2583 5.277442 CCAAACAACATGCCAAAGTTGATTC 60.277 40.000 17.00 0.00 46.01 2.52
2348 2584 4.575645 CCAAACAACATGCCAAAGTTGATT 59.424 37.500 17.00 10.43 46.01 2.57
2349 2585 4.128643 CCAAACAACATGCCAAAGTTGAT 58.871 39.130 17.00 5.61 46.01 2.57
2350 2586 3.055530 ACCAAACAACATGCCAAAGTTGA 60.056 39.130 17.00 0.00 46.01 3.18
2352 2588 3.625649 ACCAAACAACATGCCAAAGTT 57.374 38.095 0.00 0.00 0.00 2.66
2353 2589 3.625649 AACCAAACAACATGCCAAAGT 57.374 38.095 0.00 0.00 0.00 2.66
2354 2590 3.807071 GGTAACCAAACAACATGCCAAAG 59.193 43.478 0.00 0.00 0.00 2.77
2355 2591 3.452627 AGGTAACCAAACAACATGCCAAA 59.547 39.130 0.00 0.00 37.17 3.28
2356 2592 3.034635 AGGTAACCAAACAACATGCCAA 58.965 40.909 0.00 0.00 37.17 4.52
2357 2593 2.363680 CAGGTAACCAAACAACATGCCA 59.636 45.455 0.00 0.00 37.17 4.92
2358 2594 2.866065 GCAGGTAACCAAACAACATGCC 60.866 50.000 0.23 0.00 43.15 4.40
2359 2595 2.403259 GCAGGTAACCAAACAACATGC 58.597 47.619 0.00 0.00 42.65 4.06
2360 2596 3.724508 TGCAGGTAACCAAACAACATG 57.275 42.857 0.00 0.00 37.17 3.21
2361 2597 4.100808 ACAATGCAGGTAACCAAACAACAT 59.899 37.500 0.00 0.00 37.17 2.71
2362 2598 3.449018 ACAATGCAGGTAACCAAACAACA 59.551 39.130 0.00 0.00 37.17 3.33
2363 2599 4.048504 GACAATGCAGGTAACCAAACAAC 58.951 43.478 0.00 0.00 37.17 3.32
2364 2600 3.957497 AGACAATGCAGGTAACCAAACAA 59.043 39.130 0.00 0.00 37.17 2.83
2365 2601 3.561143 AGACAATGCAGGTAACCAAACA 58.439 40.909 0.00 0.00 37.17 2.83
2366 2602 3.364964 CGAGACAATGCAGGTAACCAAAC 60.365 47.826 0.00 0.00 37.17 2.93
2367 2603 2.811431 CGAGACAATGCAGGTAACCAAA 59.189 45.455 0.00 0.00 37.17 3.28
2368 2604 2.422597 CGAGACAATGCAGGTAACCAA 58.577 47.619 0.00 0.00 37.17 3.67
2369 2605 1.338674 CCGAGACAATGCAGGTAACCA 60.339 52.381 0.00 0.00 37.17 3.67
2370 2606 1.369625 CCGAGACAATGCAGGTAACC 58.630 55.000 0.00 0.00 37.17 2.85
2371 2607 0.727398 GCCGAGACAATGCAGGTAAC 59.273 55.000 0.00 0.00 0.00 2.50
2372 2608 0.739462 CGCCGAGACAATGCAGGTAA 60.739 55.000 0.00 0.00 0.00 2.85
2373 2609 1.153647 CGCCGAGACAATGCAGGTA 60.154 57.895 0.00 0.00 0.00 3.08
2374 2610 2.434884 CGCCGAGACAATGCAGGT 60.435 61.111 0.00 0.00 0.00 4.00
2375 2611 3.869272 GCGCCGAGACAATGCAGG 61.869 66.667 0.00 0.00 0.00 4.85
2376 2612 2.466982 ATGCGCCGAGACAATGCAG 61.467 57.895 4.18 0.00 39.17 4.41
2377 2613 2.436469 ATGCGCCGAGACAATGCA 60.436 55.556 4.18 0.00 40.23 3.96
2378 2614 2.023741 CATGCGCCGAGACAATGC 59.976 61.111 4.18 0.00 0.00 3.56
2379 2615 2.023741 GCATGCGCCGAGACAATG 59.976 61.111 4.18 0.27 0.00 2.82
2380 2616 2.039974 TTGCATGCGCCGAGACAAT 61.040 52.632 14.09 0.00 37.32 2.71
2381 2617 2.667874 TTGCATGCGCCGAGACAA 60.668 55.556 14.09 0.00 37.32 3.18
2382 2618 2.499756 TAGTTGCATGCGCCGAGACA 62.500 55.000 14.09 0.00 37.32 3.41
2383 2619 1.809619 TAGTTGCATGCGCCGAGAC 60.810 57.895 14.09 4.77 37.32 3.36
2384 2620 1.809619 GTAGTTGCATGCGCCGAGA 60.810 57.895 14.09 0.00 37.32 4.04
2385 2621 2.100031 TGTAGTTGCATGCGCCGAG 61.100 57.895 14.09 0.00 37.32 4.63
2386 2622 2.047750 TGTAGTTGCATGCGCCGA 60.048 55.556 14.09 0.00 37.32 5.54
2387 2623 2.098298 GTGTAGTTGCATGCGCCG 59.902 61.111 14.09 0.00 37.32 6.46
2388 2624 2.098298 CGTGTAGTTGCATGCGCC 59.902 61.111 14.09 5.70 37.32 6.53
2389 2625 1.206578 AACGTGTAGTTGCATGCGC 59.793 52.632 14.09 0.00 42.39 6.09
2397 2633 2.159352 GGCAACCAAACAACGTGTAGTT 60.159 45.455 0.00 0.00 45.45 2.24
2398 2634 1.402613 GGCAACCAAACAACGTGTAGT 59.597 47.619 0.00 0.00 0.00 2.73
2399 2635 2.113910 GGCAACCAAACAACGTGTAG 57.886 50.000 0.00 0.00 0.00 2.74
2412 2648 3.792588 TCATACCTCATGCGGGCAACC 62.793 57.143 6.69 0.00 43.34 3.77
2413 2649 0.463654 TCATACCTCATGCGGGCAAC 60.464 55.000 6.69 0.00 34.35 4.17
2414 2650 0.473755 ATCATACCTCATGCGGGCAA 59.526 50.000 6.69 0.00 34.35 4.52
2415 2651 0.473755 AATCATACCTCATGCGGGCA 59.526 50.000 6.69 0.00 34.35 5.36
2416 2652 2.472695 TAATCATACCTCATGCGGGC 57.527 50.000 6.69 0.00 34.35 6.13
2417 2653 4.248859 CTCTTAATCATACCTCATGCGGG 58.751 47.826 6.69 4.88 34.35 6.13
2418 2654 3.681897 GCTCTTAATCATACCTCATGCGG 59.318 47.826 0.00 0.00 34.35 5.69
2419 2655 4.564041 AGCTCTTAATCATACCTCATGCG 58.436 43.478 0.00 0.00 34.35 4.73
2420 2656 5.580297 GCTAGCTCTTAATCATACCTCATGC 59.420 44.000 7.70 0.00 34.35 4.06
2421 2657 6.589523 GTGCTAGCTCTTAATCATACCTCATG 59.410 42.308 17.23 0.00 35.81 3.07
2422 2658 6.496565 AGTGCTAGCTCTTAATCATACCTCAT 59.503 38.462 17.23 0.00 0.00 2.90
2423 2659 5.835819 AGTGCTAGCTCTTAATCATACCTCA 59.164 40.000 17.23 0.00 0.00 3.86
2424 2660 6.339587 AGTGCTAGCTCTTAATCATACCTC 57.660 41.667 17.23 0.00 0.00 3.85
2425 2661 6.520272 CAAGTGCTAGCTCTTAATCATACCT 58.480 40.000 26.76 3.50 0.00 3.08
2426 2662 5.178438 GCAAGTGCTAGCTCTTAATCATACC 59.822 44.000 26.76 8.50 38.21 2.73
2427 2663 5.755375 TGCAAGTGCTAGCTCTTAATCATAC 59.245 40.000 26.76 8.78 42.66 2.39
2428 2664 5.755375 GTGCAAGTGCTAGCTCTTAATCATA 59.245 40.000 26.76 10.59 42.66 2.15
2429 2665 4.574013 GTGCAAGTGCTAGCTCTTAATCAT 59.426 41.667 26.76 6.20 42.66 2.45
2430 2666 3.935203 GTGCAAGTGCTAGCTCTTAATCA 59.065 43.478 26.76 21.21 42.66 2.57
2431 2667 4.187694 AGTGCAAGTGCTAGCTCTTAATC 58.812 43.478 26.76 19.42 42.66 1.75
2432 2668 4.213564 AGTGCAAGTGCTAGCTCTTAAT 57.786 40.909 26.76 12.70 42.66 1.40
2433 2669 3.685139 AGTGCAAGTGCTAGCTCTTAA 57.315 42.857 26.76 17.40 42.66 1.85
2434 2670 3.685139 AAGTGCAAGTGCTAGCTCTTA 57.315 42.857 26.76 13.42 41.22 2.10
2435 2671 2.557920 AAGTGCAAGTGCTAGCTCTT 57.442 45.000 23.01 23.01 42.66 2.85
2436 2672 2.676463 GCTAAGTGCAAGTGCTAGCTCT 60.676 50.000 17.23 15.26 38.50 4.09
2437 2673 1.663135 GCTAAGTGCAAGTGCTAGCTC 59.337 52.381 17.23 12.88 38.50 4.09
2438 2674 1.731720 GCTAAGTGCAAGTGCTAGCT 58.268 50.000 17.23 0.00 38.50 3.32
2449 2685 2.178912 TAACCCTGTGTGCTAAGTGC 57.821 50.000 0.00 0.00 43.25 4.40
2450 2686 3.997021 CTCTTAACCCTGTGTGCTAAGTG 59.003 47.826 0.00 0.00 0.00 3.16
2451 2687 3.557264 GCTCTTAACCCTGTGTGCTAAGT 60.557 47.826 0.00 0.00 0.00 2.24
2452 2688 3.003480 GCTCTTAACCCTGTGTGCTAAG 58.997 50.000 0.00 0.00 0.00 2.18
2453 2689 2.637872 AGCTCTTAACCCTGTGTGCTAA 59.362 45.455 0.00 0.00 0.00 3.09
2454 2690 2.257207 AGCTCTTAACCCTGTGTGCTA 58.743 47.619 0.00 0.00 0.00 3.49
2455 2691 1.059913 AGCTCTTAACCCTGTGTGCT 58.940 50.000 0.00 0.00 0.00 4.40
2456 2692 2.622436 CTAGCTCTTAACCCTGTGTGC 58.378 52.381 0.00 0.00 0.00 4.57
2457 2693 2.028112 TGCTAGCTCTTAACCCTGTGTG 60.028 50.000 17.23 0.00 0.00 3.82
2458 2694 2.234908 CTGCTAGCTCTTAACCCTGTGT 59.765 50.000 17.23 0.00 0.00 3.72
2459 2695 2.497675 TCTGCTAGCTCTTAACCCTGTG 59.502 50.000 17.23 0.00 0.00 3.66
2460 2696 2.821437 TCTGCTAGCTCTTAACCCTGT 58.179 47.619 17.23 0.00 0.00 4.00
2461 2697 3.449018 TCTTCTGCTAGCTCTTAACCCTG 59.551 47.826 17.23 0.00 0.00 4.45
2462 2698 3.714144 TCTTCTGCTAGCTCTTAACCCT 58.286 45.455 17.23 0.00 0.00 4.34
2463 2699 4.438148 CTTCTTCTGCTAGCTCTTAACCC 58.562 47.826 17.23 0.00 0.00 4.11
2464 2700 4.438148 CCTTCTTCTGCTAGCTCTTAACC 58.562 47.826 17.23 0.00 0.00 2.85
2465 2701 4.081365 ACCCTTCTTCTGCTAGCTCTTAAC 60.081 45.833 17.23 0.00 0.00 2.01
2466 2702 4.081420 CACCCTTCTTCTGCTAGCTCTTAA 60.081 45.833 17.23 4.07 0.00 1.85
2467 2703 3.449018 CACCCTTCTTCTGCTAGCTCTTA 59.551 47.826 17.23 0.00 0.00 2.10
2468 2704 2.235898 CACCCTTCTTCTGCTAGCTCTT 59.764 50.000 17.23 0.00 0.00 2.85
2469 2705 1.830477 CACCCTTCTTCTGCTAGCTCT 59.170 52.381 17.23 0.00 0.00 4.09
2470 2706 1.827969 TCACCCTTCTTCTGCTAGCTC 59.172 52.381 17.23 0.00 0.00 4.09
2471 2707 1.830477 CTCACCCTTCTTCTGCTAGCT 59.170 52.381 17.23 0.00 0.00 3.32
2472 2708 1.827969 TCTCACCCTTCTTCTGCTAGC 59.172 52.381 8.10 8.10 0.00 3.42
2473 2709 3.766591 TCTTCTCACCCTTCTTCTGCTAG 59.233 47.826 0.00 0.00 0.00 3.42
2474 2710 3.779444 TCTTCTCACCCTTCTTCTGCTA 58.221 45.455 0.00 0.00 0.00 3.49
2475 2711 2.614259 TCTTCTCACCCTTCTTCTGCT 58.386 47.619 0.00 0.00 0.00 4.24
2476 2712 3.409026 TTCTTCTCACCCTTCTTCTGC 57.591 47.619 0.00 0.00 0.00 4.26
2477 2713 4.155644 GCATTTCTTCTCACCCTTCTTCTG 59.844 45.833 0.00 0.00 0.00 3.02
2478 2714 4.202503 TGCATTTCTTCTCACCCTTCTTCT 60.203 41.667 0.00 0.00 0.00 2.85
2479 2715 4.074970 TGCATTTCTTCTCACCCTTCTTC 58.925 43.478 0.00 0.00 0.00 2.87
2480 2716 4.077822 CTGCATTTCTTCTCACCCTTCTT 58.922 43.478 0.00 0.00 0.00 2.52
2481 2717 3.073650 ACTGCATTTCTTCTCACCCTTCT 59.926 43.478 0.00 0.00 0.00 2.85
2482 2718 3.190118 CACTGCATTTCTTCTCACCCTTC 59.810 47.826 0.00 0.00 0.00 3.46
2483 2719 3.152341 CACTGCATTTCTTCTCACCCTT 58.848 45.455 0.00 0.00 0.00 3.95
2484 2720 2.107204 ACACTGCATTTCTTCTCACCCT 59.893 45.455 0.00 0.00 0.00 4.34
2485 2721 2.227388 CACACTGCATTTCTTCTCACCC 59.773 50.000 0.00 0.00 0.00 4.61
2486 2722 2.351157 GCACACTGCATTTCTTCTCACC 60.351 50.000 0.00 0.00 44.26 4.02
2487 2723 2.663879 CGCACACTGCATTTCTTCTCAC 60.664 50.000 0.00 0.00 45.36 3.51
2488 2724 1.532437 CGCACACTGCATTTCTTCTCA 59.468 47.619 0.00 0.00 45.36 3.27
2489 2725 1.727213 GCGCACACTGCATTTCTTCTC 60.727 52.381 0.30 0.00 45.36 2.87
2490 2726 0.239347 GCGCACACTGCATTTCTTCT 59.761 50.000 0.30 0.00 45.36 2.85
2491 2727 0.730494 GGCGCACACTGCATTTCTTC 60.730 55.000 10.83 0.00 45.36 2.87
2492 2728 1.286880 GGCGCACACTGCATTTCTT 59.713 52.632 10.83 0.00 45.36 2.52
2493 2729 2.956987 GGCGCACACTGCATTTCT 59.043 55.556 10.83 0.00 45.36 2.52
2494 2730 2.502510 CGGCGCACACTGCATTTC 60.503 61.111 10.83 0.00 45.36 2.17
2495 2731 4.041917 CCGGCGCACACTGCATTT 62.042 61.111 10.83 0.00 45.36 2.32
2509 2745 3.723235 CTCAGTCGCCATGGTCCGG 62.723 68.421 14.67 0.00 0.00 5.14
2510 2746 2.202797 CTCAGTCGCCATGGTCCG 60.203 66.667 14.67 9.64 0.00 4.79
2511 2747 2.187946 CCTCAGTCGCCATGGTCC 59.812 66.667 14.67 1.25 0.00 4.46
2512 2748 1.448540 CACCTCAGTCGCCATGGTC 60.449 63.158 14.67 4.79 0.00 4.02
2513 2749 2.665000 CACCTCAGTCGCCATGGT 59.335 61.111 14.67 0.00 0.00 3.55
2514 2750 1.976132 ATCCACCTCAGTCGCCATGG 61.976 60.000 7.63 7.63 0.00 3.66
2515 2751 0.752658 TATCCACCTCAGTCGCCATG 59.247 55.000 0.00 0.00 0.00 3.66
2516 2752 1.043816 CTATCCACCTCAGTCGCCAT 58.956 55.000 0.00 0.00 0.00 4.40
2517 2753 0.324368 ACTATCCACCTCAGTCGCCA 60.324 55.000 0.00 0.00 0.00 5.69
2518 2754 0.103208 CACTATCCACCTCAGTCGCC 59.897 60.000 0.00 0.00 0.00 5.54
2519 2755 0.103208 CCACTATCCACCTCAGTCGC 59.897 60.000 0.00 0.00 0.00 5.19
2520 2756 1.405821 GACCACTATCCACCTCAGTCG 59.594 57.143 0.00 0.00 0.00 4.18
2521 2757 1.405821 CGACCACTATCCACCTCAGTC 59.594 57.143 0.00 0.00 0.00 3.51
2522 2758 1.272536 ACGACCACTATCCACCTCAGT 60.273 52.381 0.00 0.00 0.00 3.41
2523 2759 1.135139 CACGACCACTATCCACCTCAG 59.865 57.143 0.00 0.00 0.00 3.35
2524 2760 1.182667 CACGACCACTATCCACCTCA 58.817 55.000 0.00 0.00 0.00 3.86
2525 2761 0.460311 CCACGACCACTATCCACCTC 59.540 60.000 0.00 0.00 0.00 3.85
2526 2762 1.614241 GCCACGACCACTATCCACCT 61.614 60.000 0.00 0.00 0.00 4.00
2527 2763 1.153429 GCCACGACCACTATCCACC 60.153 63.158 0.00 0.00 0.00 4.61
2528 2764 1.518572 CGCCACGACCACTATCCAC 60.519 63.158 0.00 0.00 0.00 4.02
2529 2765 2.889617 CGCCACGACCACTATCCA 59.110 61.111 0.00 0.00 0.00 3.41
2530 2766 2.585247 GCGCCACGACCACTATCC 60.585 66.667 0.00 0.00 0.00 2.59
2531 2767 2.573609 AAGGCGCCACGACCACTATC 62.574 60.000 31.54 0.00 34.11 2.08
2532 2768 2.656069 AAGGCGCCACGACCACTAT 61.656 57.895 31.54 0.00 34.11 2.12
2533 2769 3.307906 AAGGCGCCACGACCACTA 61.308 61.111 31.54 0.00 34.11 2.74
2534 2770 4.988598 CAAGGCGCCACGACCACT 62.989 66.667 31.54 0.76 34.11 4.00
2536 2772 4.980805 GACAAGGCGCCACGACCA 62.981 66.667 31.54 0.00 34.11 4.02
2541 2777 4.980805 TGTCGGACAAGGCGCCAC 62.981 66.667 31.54 16.80 0.00 5.01
2542 2778 4.015406 ATGTCGGACAAGGCGCCA 62.015 61.111 31.54 4.05 0.00 5.69
2543 2779 3.499737 CATGTCGGACAAGGCGCC 61.500 66.667 21.89 21.89 0.00 6.53
2544 2780 2.434185 TCATGTCGGACAAGGCGC 60.434 61.111 15.72 0.00 0.00 6.53
2545 2781 2.444624 CGTCATGTCGGACAAGGCG 61.445 63.158 23.00 23.00 38.52 5.52
2546 2782 1.078759 CTCGTCATGTCGGACAAGGC 61.079 60.000 15.72 11.51 37.66 4.35
2547 2783 1.078759 GCTCGTCATGTCGGACAAGG 61.079 60.000 15.72 10.58 37.66 3.61
2548 2784 0.388520 TGCTCGTCATGTCGGACAAG 60.389 55.000 15.72 11.14 37.66 3.16
2549 2785 0.246360 ATGCTCGTCATGTCGGACAA 59.754 50.000 15.72 0.00 37.66 3.18
2550 2786 0.458370 CATGCTCGTCATGTCGGACA 60.458 55.000 14.01 14.01 45.79 4.02
2551 2787 2.291843 CATGCTCGTCATGTCGGAC 58.708 57.895 12.31 0.00 45.79 4.79
2552 2788 4.812814 CATGCTCGTCATGTCGGA 57.187 55.556 12.31 0.00 45.79 4.55
2558 2794 0.179127 CACGACTCCATGCTCGTCAT 60.179 55.000 7.99 0.00 41.13 3.06
2559 2795 1.212751 CACGACTCCATGCTCGTCA 59.787 57.895 7.99 0.00 41.13 4.35
2560 2796 1.517257 CCACGACTCCATGCTCGTC 60.517 63.158 7.99 3.55 41.13 4.20
2561 2797 1.977009 TCCACGACTCCATGCTCGT 60.977 57.895 5.71 5.71 43.83 4.18
2562 2798 1.517257 GTCCACGACTCCATGCTCG 60.517 63.158 0.00 4.63 35.96 5.03
2563 2799 1.517257 CGTCCACGACTCCATGCTC 60.517 63.158 0.00 0.00 43.02 4.26
2564 2800 1.938657 CTCGTCCACGACTCCATGCT 61.939 60.000 0.00 0.00 44.22 3.79
2565 2801 1.517257 CTCGTCCACGACTCCATGC 60.517 63.158 0.00 0.00 44.22 4.06
2566 2802 1.517257 GCTCGTCCACGACTCCATG 60.517 63.158 0.00 0.00 44.22 3.66
2567 2803 2.885861 GCTCGTCCACGACTCCAT 59.114 61.111 0.00 0.00 44.22 3.41
2568 2804 3.733960 CGCTCGTCCACGACTCCA 61.734 66.667 0.00 0.00 44.22 3.86
2569 2805 3.429141 TCGCTCGTCCACGACTCC 61.429 66.667 0.00 0.00 44.22 3.85
2609 2845 1.513586 CTAGTTCGCCGACGGTGTC 60.514 63.158 25.69 19.10 40.63 3.67
2610 2846 2.192608 GACTAGTTCGCCGACGGTGT 62.193 60.000 25.69 10.58 40.63 4.16
2611 2847 1.513586 GACTAGTTCGCCGACGGTG 60.514 63.158 21.48 21.48 40.63 4.94
2612 2848 2.873288 GACTAGTTCGCCGACGGT 59.127 61.111 16.73 0.00 40.63 4.83
2613 2849 2.277120 CGACTAGTTCGCCGACGG 60.277 66.667 10.29 10.29 41.87 4.79
2621 2857 4.074454 GAGCACCGCGACTAGTTC 57.926 61.111 8.23 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.