Multiple sequence alignment - TraesCS2B01G382000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G382000 chr2B 100.000 2793 0 0 977 3769 545755410 545758202 0.000000e+00 5158.0
1 TraesCS2B01G382000 chr2B 100.000 567 0 0 1 567 545754434 545755000 0.000000e+00 1048.0
2 TraesCS2B01G382000 chr2B 85.780 218 28 2 1412 1629 9921616 9921830 1.050000e-55 228.0
3 TraesCS2B01G382000 chr2B 90.278 144 14 0 1638 1781 9921879 9922022 4.970000e-44 189.0
4 TraesCS2B01G382000 chr2B 100.000 37 0 0 3044 3080 545757439 545757475 6.760000e-08 69.4
5 TraesCS2B01G382000 chr2B 100.000 37 0 0 3006 3042 545757477 545757513 6.760000e-08 69.4
6 TraesCS2B01G382000 chr2B 97.059 34 1 0 3074 3107 545757409 545757442 1.460000e-04 58.4
7 TraesCS2B01G382000 chr2B 97.059 34 1 0 2976 3009 545757507 545757540 1.460000e-04 58.4
8 TraesCS2B01G382000 chr2D 89.559 2289 150 42 977 3240 467057918 467060142 0.000000e+00 2820.0
9 TraesCS2B01G382000 chr2D 88.525 244 24 2 1 240 467056063 467056306 3.680000e-75 292.0
10 TraesCS2B01G382000 chr2D 97.059 170 5 0 3588 3757 467060137 467060306 1.710000e-73 287.0
11 TraesCS2B01G382000 chr2D 87.352 253 20 2 255 507 467057256 467057496 2.870000e-71 279.0
12 TraesCS2B01G382000 chr2D 97.059 34 1 0 3074 3107 467059898 467059931 1.460000e-04 58.4
13 TraesCS2B01G382000 chr2A 88.862 2092 135 34 977 3039 607908351 607910373 0.000000e+00 2483.0
14 TraesCS2B01G382000 chr2A 91.979 187 12 3 252 438 607907593 607907776 3.730000e-65 259.0
15 TraesCS2B01G382000 chr6D 87.648 842 54 31 977 1784 451098681 451099506 0.000000e+00 933.0
16 TraesCS2B01G382000 chr6D 85.361 526 63 10 2287 2801 451099872 451100394 1.990000e-147 532.0
17 TraesCS2B01G382000 chr6A 87.485 823 72 13 977 1771 596744673 596745492 0.000000e+00 920.0
18 TraesCS2B01G382000 chr6A 83.743 529 57 15 2287 2801 596745869 596746382 1.230000e-129 473.0
19 TraesCS2B01G382000 chr6A 84.091 88 14 0 3551 3638 539181244 539181331 6.710000e-13 86.1
20 TraesCS2B01G382000 chr6B 88.010 809 56 26 978 1759 685151367 685152161 0.000000e+00 918.0
21 TraesCS2B01G382000 chr6B 84.762 525 59 13 2287 2797 685152556 685153073 1.210000e-139 507.0
22 TraesCS2B01G382000 chr6B 88.889 144 16 0 1638 1781 702627751 702627608 1.080000e-40 178.0
23 TraesCS2B01G382000 chr6B 83.673 98 13 2 1532 1629 31380461 31380555 5.190000e-14 89.8
24 TraesCS2B01G382000 chr5A 81.925 426 62 13 1212 1629 639311731 639311313 2.790000e-91 346.0
25 TraesCS2B01G382000 chr1B 80.986 426 65 13 1212 1629 490598163 490598580 1.310000e-84 324.0
26 TraesCS2B01G382000 chr7B 90.972 144 13 0 1638 1781 348045208 348045351 1.070000e-45 195.0
27 TraesCS2B01G382000 chr7B 90.278 144 14 0 1638 1781 27649295 27649438 4.970000e-44 189.0
28 TraesCS2B01G382000 chr3B 89.583 144 15 0 1638 1781 755583884 755584027 2.310000e-42 183.0
29 TraesCS2B01G382000 chr4A 88.889 144 16 0 1638 1781 665985564 665985421 1.080000e-40 178.0
30 TraesCS2B01G382000 chr5B 88.194 144 17 0 1638 1781 680845867 680846010 5.010000e-39 172.0
31 TraesCS2B01G382000 chr5D 87.500 88 11 0 3551 3638 496980409 496980496 6.660000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G382000 chr2B 545754434 545758202 3768 False 1076.933333 5158 99.019667 1 3769 6 chr2B.!!$F2 3768
1 TraesCS2B01G382000 chr2D 467056063 467060306 4243 False 747.280000 2820 91.910800 1 3757 5 chr2D.!!$F1 3756
2 TraesCS2B01G382000 chr2A 607907593 607910373 2780 False 1371.000000 2483 90.420500 252 3039 2 chr2A.!!$F1 2787
3 TraesCS2B01G382000 chr6D 451098681 451100394 1713 False 732.500000 933 86.504500 977 2801 2 chr6D.!!$F1 1824
4 TraesCS2B01G382000 chr6A 596744673 596746382 1709 False 696.500000 920 85.614000 977 2801 2 chr6A.!!$F2 1824
5 TraesCS2B01G382000 chr6B 685151367 685153073 1706 False 712.500000 918 86.386000 978 2797 2 chr6B.!!$F2 1819

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.588252 ATGCGTTGAGTGTTGCAGAC 59.412 50.0 0.0 0.0 41.19 3.51 F
528 1824 0.621571 CATTCCCCTCTCCTCCACCA 60.622 60.0 0.0 0.0 0.00 4.17 F
1348 2656 0.039035 TGCCGCCCCTCTTTACATTT 59.961 50.0 0.0 0.0 0.00 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1329 2625 0.039035 AAATGTAAAGAGGGGCGGCA 59.961 50.0 12.47 0.0 0.00 5.69 R
2182 3582 0.239347 CAAGCTTCCGCAGACAAAGG 59.761 55.0 0.00 0.0 39.10 3.11 R
3252 4711 0.042131 TGGAGGTACCCCTGGTAGTG 59.958 60.0 8.74 0.0 42.86 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.574399 GAGTGGTCGAGGGTCTGC 59.426 66.667 0.00 0.00 0.00 4.26
51 52 6.721318 TGGAGATGCCTTACTTACTCAAAAT 58.279 36.000 0.00 0.00 37.63 1.82
53 54 6.442513 AGATGCCTTACTTACTCAAAATGC 57.557 37.500 0.00 0.00 0.00 3.56
57 58 4.851558 GCCTTACTTACTCAAAATGCGTTG 59.148 41.667 0.00 0.00 0.00 4.10
67 68 2.124011 AAATGCGTTGAGTGTTGCAG 57.876 45.000 0.00 0.00 41.19 4.41
69 70 0.588252 ATGCGTTGAGTGTTGCAGAC 59.412 50.000 0.00 0.00 41.19 3.51
89 90 6.074623 GCAGACTATGTGATTGATACACTTCG 60.075 42.308 0.00 0.00 38.81 3.79
98 102 8.229811 TGTGATTGATACACTTCGAATTTTCAG 58.770 33.333 0.00 0.00 38.81 3.02
116 120 1.095228 AGGACACACAAACTGCACGG 61.095 55.000 0.00 0.00 0.00 4.94
149 153 9.669353 GTTACAACAATTTATATGCATCTCCTG 57.331 33.333 0.19 0.00 0.00 3.86
166 170 3.290710 TCCTGCCATTTTTAGATGCTCC 58.709 45.455 0.00 0.00 0.00 4.70
167 171 2.033801 CCTGCCATTTTTAGATGCTCCG 59.966 50.000 0.00 0.00 0.00 4.63
188 192 6.648502 TCCGAAATTTCAAACAACGTAGTAC 58.351 36.000 17.99 0.00 45.00 2.73
197 201 7.002816 TCAAACAACGTAGTACAAACGAAAT 57.997 32.000 22.64 9.21 45.00 2.17
198 202 7.118724 TCAAACAACGTAGTACAAACGAAATC 58.881 34.615 22.64 0.00 45.00 2.17
199 203 5.241378 ACAACGTAGTACAAACGAAATCG 57.759 39.130 22.64 0.48 45.00 3.34
200 204 4.975502 ACAACGTAGTACAAACGAAATCGA 59.024 37.500 22.64 0.00 45.00 3.59
205 210 6.198966 ACGTAGTACAAACGAAATCGAAAGTT 59.801 34.615 22.64 0.00 41.94 2.66
240 245 2.824388 AAACCGAGGAGGGGAGGGAG 62.824 65.000 0.00 0.00 46.96 4.30
242 247 4.548513 CGAGGAGGGGAGGGAGGG 62.549 77.778 0.00 0.00 0.00 4.30
243 248 3.036959 GAGGAGGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
246 251 2.040359 GAGGGGAGGGAGGGAAGG 60.040 72.222 0.00 0.00 0.00 3.46
247 252 3.711782 AGGGGAGGGAGGGAAGGG 61.712 72.222 0.00 0.00 0.00 3.95
248 253 3.707189 GGGGAGGGAGGGAAGGGA 61.707 72.222 0.00 0.00 0.00 4.20
249 254 2.459710 GGGAGGGAGGGAAGGGAA 59.540 66.667 0.00 0.00 0.00 3.97
250 255 1.694525 GGGAGGGAGGGAAGGGAAG 60.695 68.421 0.00 0.00 0.00 3.46
290 1230 1.449601 GAGATGGCGGGAAAGCGAA 60.450 57.895 0.00 0.00 38.18 4.70
291 1231 0.815615 GAGATGGCGGGAAAGCGAAT 60.816 55.000 0.00 0.00 38.18 3.34
329 1269 1.112916 CCAGAAACACCCGCCCTTTT 61.113 55.000 0.00 0.00 0.00 2.27
404 1344 2.194056 CGCAGGCCAATCTCCCAT 59.806 61.111 5.01 0.00 0.00 4.00
430 1370 1.425428 GAGTGCGAGCGGGAAAATG 59.575 57.895 0.00 0.00 0.00 2.32
432 1372 1.134694 GTGCGAGCGGGAAAATGTC 59.865 57.895 0.00 0.00 0.00 3.06
438 1378 3.089784 CGGGAAAATGTCTCGCGG 58.910 61.111 6.13 0.00 44.92 6.46
439 1379 2.461110 CGGGAAAATGTCTCGCGGG 61.461 63.158 6.13 1.01 44.92 6.13
440 1380 2.761195 GGGAAAATGTCTCGCGGGC 61.761 63.158 6.13 0.00 0.00 6.13
441 1381 2.399611 GAAAATGTCTCGCGGGCG 59.600 61.111 6.13 6.74 41.35 6.13
442 1382 3.718480 GAAAATGTCTCGCGGGCGC 62.718 63.158 6.13 0.00 39.59 6.53
484 1424 4.483243 GCTCCGCATCCCCCGAAA 62.483 66.667 0.00 0.00 0.00 3.46
485 1425 2.513897 CTCCGCATCCCCCGAAAC 60.514 66.667 0.00 0.00 0.00 2.78
486 1426 3.323286 TCCGCATCCCCCGAAACA 61.323 61.111 0.00 0.00 0.00 2.83
487 1427 3.131478 CCGCATCCCCCGAAACAC 61.131 66.667 0.00 0.00 0.00 3.32
488 1428 2.046314 CGCATCCCCCGAAACACT 60.046 61.111 0.00 0.00 0.00 3.55
528 1824 0.621571 CATTCCCCTCTCCTCCACCA 60.622 60.000 0.00 0.00 0.00 4.17
1329 2625 0.473886 AGTCACCCAGTAAGCACCCT 60.474 55.000 0.00 0.00 0.00 4.34
1343 2651 3.407967 CCCTGCCGCCCCTCTTTA 61.408 66.667 0.00 0.00 0.00 1.85
1345 2653 2.668632 CTGCCGCCCCTCTTTACA 59.331 61.111 0.00 0.00 0.00 2.41
1348 2656 0.039035 TGCCGCCCCTCTTTACATTT 59.961 50.000 0.00 0.00 0.00 2.32
1349 2657 0.738975 GCCGCCCCTCTTTACATTTC 59.261 55.000 0.00 0.00 0.00 2.17
1350 2658 1.682087 GCCGCCCCTCTTTACATTTCT 60.682 52.381 0.00 0.00 0.00 2.52
1351 2659 2.723273 CCGCCCCTCTTTACATTTCTT 58.277 47.619 0.00 0.00 0.00 2.52
1352 2660 3.089284 CCGCCCCTCTTTACATTTCTTT 58.911 45.455 0.00 0.00 0.00 2.52
1353 2661 3.128764 CCGCCCCTCTTTACATTTCTTTC 59.871 47.826 0.00 0.00 0.00 2.62
1354 2662 3.128764 CGCCCCTCTTTACATTTCTTTCC 59.871 47.826 0.00 0.00 0.00 3.13
1355 2663 3.128764 GCCCCTCTTTACATTTCTTTCCG 59.871 47.826 0.00 0.00 0.00 4.30
1356 2664 3.128764 CCCCTCTTTACATTTCTTTCCGC 59.871 47.826 0.00 0.00 0.00 5.54
1357 2665 4.010349 CCCTCTTTACATTTCTTTCCGCT 58.990 43.478 0.00 0.00 0.00 5.52
1360 2668 3.190535 TCTTTACATTTCTTTCCGCTGGC 59.809 43.478 0.00 0.00 0.00 4.85
1377 2688 1.669999 GGCCCTCTTCGTTAGCCGTA 61.670 60.000 0.00 0.00 37.94 4.02
1588 2915 3.308401 GGTATGCTGAATCCCCCATTTT 58.692 45.455 0.00 0.00 0.00 1.82
1602 2931 5.362430 TCCCCCATTTTCTGTATTATTGTGC 59.638 40.000 0.00 0.00 0.00 4.57
1647 3010 3.934457 TCTTACATGTCTTCTGTGCGA 57.066 42.857 0.00 0.00 0.00 5.10
1735 3098 3.756933 AACATTGTTTGCAGGCAGAAT 57.243 38.095 0.00 0.00 0.00 2.40
1833 3206 6.865726 TGTGATTTTGTGGTGTATTGCATAAC 59.134 34.615 0.00 0.00 0.00 1.89
1874 3247 6.854496 ATTGCATGGATGATTGTATTTTGC 57.146 33.333 0.00 0.00 0.00 3.68
1875 3248 5.601583 TGCATGGATGATTGTATTTTGCT 57.398 34.783 0.00 0.00 0.00 3.91
1909 3282 3.378112 TGCAGCAACATAAATAGTCAGCC 59.622 43.478 0.00 0.00 0.00 4.85
1910 3283 3.378112 GCAGCAACATAAATAGTCAGCCA 59.622 43.478 0.00 0.00 0.00 4.75
1912 3285 4.395854 CAGCAACATAAATAGTCAGCCACA 59.604 41.667 0.00 0.00 0.00 4.17
1913 3286 4.396166 AGCAACATAAATAGTCAGCCACAC 59.604 41.667 0.00 0.00 0.00 3.82
1914 3287 4.438744 GCAACATAAATAGTCAGCCACACC 60.439 45.833 0.00 0.00 0.00 4.16
1915 3288 4.844349 ACATAAATAGTCAGCCACACCT 57.156 40.909 0.00 0.00 0.00 4.00
1916 3289 5.950544 ACATAAATAGTCAGCCACACCTA 57.049 39.130 0.00 0.00 0.00 3.08
1917 3290 6.308015 ACATAAATAGTCAGCCACACCTAA 57.692 37.500 0.00 0.00 0.00 2.69
1918 3291 6.900194 ACATAAATAGTCAGCCACACCTAAT 58.100 36.000 0.00 0.00 0.00 1.73
1919 3292 7.346471 ACATAAATAGTCAGCCACACCTAATT 58.654 34.615 0.00 0.00 0.00 1.40
1920 3293 7.499232 ACATAAATAGTCAGCCACACCTAATTC 59.501 37.037 0.00 0.00 0.00 2.17
1921 3294 5.700402 AATAGTCAGCCACACCTAATTCT 57.300 39.130 0.00 0.00 0.00 2.40
1922 3295 3.618690 AGTCAGCCACACCTAATTCTC 57.381 47.619 0.00 0.00 0.00 2.87
1923 3296 2.906389 AGTCAGCCACACCTAATTCTCA 59.094 45.455 0.00 0.00 0.00 3.27
1978 3363 9.515226 TCATATTTGGGCTATTTGGTAGTTATC 57.485 33.333 0.00 0.00 32.72 1.75
1981 3366 4.952460 TGGGCTATTTGGTAGTTATCGTC 58.048 43.478 0.00 0.00 32.72 4.20
1987 3372 5.581126 ATTTGGTAGTTATCGTCGGTGTA 57.419 39.130 0.00 0.00 0.00 2.90
1991 3380 4.458989 TGGTAGTTATCGTCGGTGTAGTTT 59.541 41.667 0.00 0.00 0.00 2.66
1992 3381 5.645929 TGGTAGTTATCGTCGGTGTAGTTTA 59.354 40.000 0.00 0.00 0.00 2.01
2040 3439 6.015010 GTCTATTCATAGATGCACACTACCCT 60.015 42.308 4.87 0.00 41.09 4.34
2041 3440 4.406648 TTCATAGATGCACACTACCCTG 57.593 45.455 4.87 1.55 0.00 4.45
2062 3461 1.338020 CAGTCCTGCTGTTTTGTTCCC 59.662 52.381 0.00 0.00 40.27 3.97
2066 3465 3.826729 GTCCTGCTGTTTTGTTCCCTTAT 59.173 43.478 0.00 0.00 0.00 1.73
2068 3467 5.007682 TCCTGCTGTTTTGTTCCCTTATAC 58.992 41.667 0.00 0.00 0.00 1.47
2080 3479 7.639113 TGTTCCCTTATACAGCTTAAAATGG 57.361 36.000 0.00 0.00 0.00 3.16
2081 3480 6.096282 TGTTCCCTTATACAGCTTAAAATGGC 59.904 38.462 0.00 0.00 0.00 4.40
2131 3531 9.049974 GTTGCTTTGAAATGTTTAGTTTGTTTG 57.950 29.630 0.00 0.00 0.00 2.93
2132 3532 8.316640 TGCTTTGAAATGTTTAGTTTGTTTGT 57.683 26.923 0.00 0.00 0.00 2.83
2191 3591 7.012894 TGTTAGTTTGTTACATCCCTTTGTCTG 59.987 37.037 0.00 0.00 0.00 3.51
2193 3593 2.422597 TGTTACATCCCTTTGTCTGCG 58.577 47.619 0.00 0.00 0.00 5.18
2211 3611 1.593196 CGGAAGCTTGAGTCCAACAA 58.407 50.000 2.10 0.00 33.10 2.83
2250 3650 8.518702 TGCAGCTACATATTTTTGTAACATGAA 58.481 29.630 0.00 0.00 31.96 2.57
2251 3651 9.352784 GCAGCTACATATTTTTGTAACATGAAA 57.647 29.630 0.00 0.00 31.96 2.69
2313 3729 1.746991 GCTGGTGAGCCTAGCAACC 60.747 63.158 4.91 4.91 39.57 3.77
2314 3730 1.679311 CTGGTGAGCCTAGCAACCA 59.321 57.895 12.01 12.01 42.42 3.67
2374 3798 0.320771 ATGGTTGAGGTCGTCAGTGC 60.321 55.000 0.00 0.00 36.21 4.40
2397 3825 6.265196 TGCCATCAGTGAACAAATAAGACTTT 59.735 34.615 0.00 0.00 0.00 2.66
2400 3828 9.612620 CCATCAGTGAACAAATAAGACTTTTAC 57.387 33.333 0.00 0.00 0.00 2.01
2494 3926 5.065988 CCTTGGTTTTCATATTGGAGTACCG 59.934 44.000 0.00 0.00 39.42 4.02
2510 3942 2.467566 ACCGTTTCAGGGACATGTAC 57.532 50.000 0.00 0.00 35.02 2.90
2615 4048 4.018960 ACCTTTGCTCTGAGGTACATGAAT 60.019 41.667 6.83 0.00 44.26 2.57
2827 4261 3.356290 GTGTTATCTGGCACCCAAGATT 58.644 45.455 0.00 0.00 30.80 2.40
2828 4262 3.129287 GTGTTATCTGGCACCCAAGATTG 59.871 47.826 0.00 0.00 30.80 2.67
2829 4263 3.010027 TGTTATCTGGCACCCAAGATTGA 59.990 43.478 0.00 0.00 30.80 2.57
2830 4264 2.905415 ATCTGGCACCCAAGATTGAA 57.095 45.000 0.00 0.00 30.80 2.69
2843 4281 5.182760 CCCAAGATTGAAGAAGACAAGGAAG 59.817 44.000 0.00 0.00 0.00 3.46
2877 4315 8.106247 TGGTTGTGTTTCAAGGATATTCTTAC 57.894 34.615 0.00 0.00 36.66 2.34
2932 4370 2.224670 ACCGACCTCCATTTGCTTAACA 60.225 45.455 0.00 0.00 0.00 2.41
2937 4375 5.564651 CGACCTCCATTTGCTTAACAATTGT 60.565 40.000 4.92 4.92 38.31 2.71
3014 4452 3.573967 GTGACTGTTGGTCCATGGATTTT 59.426 43.478 19.62 0.00 43.89 1.82
3015 4453 3.826157 TGACTGTTGGTCCATGGATTTTC 59.174 43.478 19.62 4.42 43.89 2.29
3016 4454 3.165071 ACTGTTGGTCCATGGATTTTCC 58.835 45.455 19.62 14.89 36.96 3.13
3017 4455 5.293516 GACTGTTGGTCCATGGATTTTCCA 61.294 45.833 19.62 17.53 43.90 3.53
3018 4456 6.564523 GACTGTTGGTCCATGGATTTTCCAT 61.565 44.000 19.62 5.20 45.32 3.41
3019 4457 7.979701 GACTGTTGGTCCATGGATTTTCCATT 61.980 42.308 19.62 5.90 45.27 3.16
3020 4458 9.872362 GACTGTTGGTCCATGGATTTTCCATTG 62.872 44.444 19.62 14.22 45.27 2.82
3029 4467 5.486735 TGGATTTTCCATTGCTGAATGTT 57.513 34.783 0.00 0.00 42.67 2.71
3030 4468 5.239351 TGGATTTTCCATTGCTGAATGTTG 58.761 37.500 0.00 0.00 42.67 3.33
3031 4469 4.632688 GGATTTTCCATTGCTGAATGTTGG 59.367 41.667 0.00 0.00 37.82 3.77
3032 4470 4.686191 TTTTCCATTGCTGAATGTTGGT 57.314 36.364 0.00 0.00 37.82 3.67
3033 4471 3.940209 TTCCATTGCTGAATGTTGGTC 57.060 42.857 0.00 0.00 37.82 4.02
3034 4472 3.159213 TCCATTGCTGAATGTTGGTCT 57.841 42.857 0.00 0.00 37.82 3.85
3035 4473 3.499338 TCCATTGCTGAATGTTGGTCTT 58.501 40.909 0.00 0.00 37.82 3.01
3036 4474 3.896888 TCCATTGCTGAATGTTGGTCTTT 59.103 39.130 0.00 0.00 37.82 2.52
3037 4475 4.344679 TCCATTGCTGAATGTTGGTCTTTT 59.655 37.500 0.00 0.00 37.82 2.27
3038 4476 5.538053 TCCATTGCTGAATGTTGGTCTTTTA 59.462 36.000 0.00 0.00 37.82 1.52
3039 4477 6.041409 TCCATTGCTGAATGTTGGTCTTTTAA 59.959 34.615 0.00 0.00 37.82 1.52
3040 4478 6.146021 CCATTGCTGAATGTTGGTCTTTTAAC 59.854 38.462 0.00 0.00 37.82 2.01
3041 4479 6.463995 TTGCTGAATGTTGGTCTTTTAACT 57.536 33.333 0.00 0.00 0.00 2.24
3042 4480 6.463995 TGCTGAATGTTGGTCTTTTAACTT 57.536 33.333 0.00 0.00 0.00 2.66
3043 4481 6.503524 TGCTGAATGTTGGTCTTTTAACTTC 58.496 36.000 0.00 0.00 0.00 3.01
3044 4482 6.096141 TGCTGAATGTTGGTCTTTTAACTTCA 59.904 34.615 0.00 0.00 0.00 3.02
3045 4483 7.147976 GCTGAATGTTGGTCTTTTAACTTCAT 58.852 34.615 0.00 0.00 30.87 2.57
3046 4484 7.115378 GCTGAATGTTGGTCTTTTAACTTCATG 59.885 37.037 0.00 0.00 30.87 3.07
3047 4485 7.432869 TGAATGTTGGTCTTTTAACTTCATGG 58.567 34.615 0.00 0.00 0.00 3.66
3048 4486 7.286546 TGAATGTTGGTCTTTTAACTTCATGGA 59.713 33.333 0.00 0.00 0.00 3.41
3049 4487 7.781324 ATGTTGGTCTTTTAACTTCATGGAT 57.219 32.000 0.00 0.00 0.00 3.41
3050 4488 7.595819 TGTTGGTCTTTTAACTTCATGGATT 57.404 32.000 0.00 0.00 0.00 3.01
3051 4489 8.017418 TGTTGGTCTTTTAACTTCATGGATTT 57.983 30.769 0.00 0.00 0.00 2.17
3052 4490 8.482128 TGTTGGTCTTTTAACTTCATGGATTTT 58.518 29.630 0.00 0.00 0.00 1.82
3077 4515 6.041409 TCCATTGCTGAATGTTGGTCTTTTAA 59.959 34.615 0.00 0.00 37.82 1.52
3090 4528 9.268268 TGTTGGTCTTTTAACTACTTGTATCTG 57.732 33.333 0.00 0.00 0.00 2.90
3107 4545 0.877071 CTGTGACTGTTGGTCCATGC 59.123 55.000 0.00 0.00 43.89 4.06
3127 4565 3.074412 GCTACACCAGTGCTGTTATTGT 58.926 45.455 0.00 0.00 0.00 2.71
3161 4620 7.111247 ACTTGGATTGATTGAAGTGTTTTGA 57.889 32.000 0.00 0.00 0.00 2.69
3169 4628 6.506147 TGATTGAAGTGTTTTGAATCAGGTG 58.494 36.000 0.00 0.00 31.17 4.00
3179 4638 1.022735 GAATCAGGTGGATGCTGCAG 58.977 55.000 10.11 10.11 36.02 4.41
3240 4699 3.690745 GCTGGAGGCATTGCAAGT 58.309 55.556 11.39 0.00 41.35 3.16
3241 4700 1.969862 GCTGGAGGCATTGCAAGTT 59.030 52.632 11.39 0.00 41.35 2.66
3242 4701 0.389426 GCTGGAGGCATTGCAAGTTG 60.389 55.000 11.39 0.00 41.35 3.16
3243 4702 0.389426 CTGGAGGCATTGCAAGTTGC 60.389 55.000 21.17 21.17 45.29 4.17
3260 4719 2.185350 CGGAGCTGCCACTACCAG 59.815 66.667 0.00 0.00 35.94 4.00
3261 4720 2.586792 GGAGCTGCCACTACCAGG 59.413 66.667 0.00 0.00 36.34 4.45
3262 4721 2.586792 GAGCTGCCACTACCAGGG 59.413 66.667 0.00 0.00 0.00 4.45
3263 4722 3.011517 AGCTGCCACTACCAGGGG 61.012 66.667 0.00 0.00 43.37 4.79
3264 4723 3.330720 GCTGCCACTACCAGGGGT 61.331 66.667 0.00 0.00 42.17 4.95
3265 4724 1.993391 GCTGCCACTACCAGGGGTA 60.993 63.158 0.00 0.00 42.17 3.69
3266 4725 1.905512 CTGCCACTACCAGGGGTAC 59.094 63.158 0.00 0.00 42.17 3.34
3285 4744 5.934921 GGTACCTCCAGTTTTAAACAATCG 58.065 41.667 10.60 0.00 35.97 3.34
3286 4745 5.471116 GGTACCTCCAGTTTTAAACAATCGT 59.529 40.000 10.60 2.47 35.97 3.73
3287 4746 6.016860 GGTACCTCCAGTTTTAAACAATCGTT 60.017 38.462 10.60 0.00 34.63 3.85
3288 4747 5.827666 ACCTCCAGTTTTAAACAATCGTTG 58.172 37.500 10.60 0.00 34.86 4.10
3289 4748 4.679654 CCTCCAGTTTTAAACAATCGTTGC 59.320 41.667 10.60 0.00 34.86 4.17
3290 4749 4.612943 TCCAGTTTTAAACAATCGTTGCC 58.387 39.130 10.60 0.00 34.86 4.52
3291 4750 3.423867 CCAGTTTTAAACAATCGTTGCCG 59.576 43.478 10.60 0.00 34.86 5.69
3292 4751 3.423867 CAGTTTTAAACAATCGTTGCCGG 59.576 43.478 10.60 0.00 34.86 6.13
3293 4752 2.053282 TTTAAACAATCGTTGCCGGC 57.947 45.000 22.73 22.73 34.86 6.13
3294 4753 0.952280 TTAAACAATCGTTGCCGGCA 59.048 45.000 29.03 29.03 34.86 5.69
3295 4754 0.238817 TAAACAATCGTTGCCGGCAC 59.761 50.000 32.95 22.80 34.86 5.01
3296 4755 1.452145 AAACAATCGTTGCCGGCACT 61.452 50.000 32.95 11.75 34.86 4.40
3297 4756 2.128853 AACAATCGTTGCCGGCACTG 62.129 55.000 32.95 24.67 32.81 3.66
3298 4757 3.737172 AATCGTTGCCGGCACTGC 61.737 61.111 32.95 21.06 39.63 4.40
3299 4758 4.704833 ATCGTTGCCGGCACTGCT 62.705 61.111 32.95 13.60 39.97 4.24
3309 4768 3.379445 GCACTGCTGCCAATGCCT 61.379 61.111 8.24 0.00 38.20 4.75
3310 4769 2.571757 CACTGCTGCCAATGCCTG 59.428 61.111 0.00 0.00 36.33 4.85
3311 4770 3.379445 ACTGCTGCCAATGCCTGC 61.379 61.111 0.00 0.00 36.33 4.85
3312 4771 3.378602 CTGCTGCCAATGCCTGCA 61.379 61.111 0.00 0.00 41.46 4.41
3313 4772 2.918276 TGCTGCCAATGCCTGCAA 60.918 55.556 0.00 0.00 41.02 4.08
3314 4773 2.433664 GCTGCCAATGCCTGCAAC 60.434 61.111 0.00 0.00 36.98 4.17
3315 4774 2.263540 CTGCCAATGCCTGCAACC 59.736 61.111 0.00 0.00 36.98 3.77
3316 4775 2.203669 TGCCAATGCCTGCAACCT 60.204 55.556 0.00 0.00 33.87 3.50
3317 4776 2.221906 CTGCCAATGCCTGCAACCTC 62.222 60.000 0.00 0.00 36.98 3.85
3318 4777 1.980772 GCCAATGCCTGCAACCTCT 60.981 57.895 0.00 0.00 0.00 3.69
3319 4778 1.888018 CCAATGCCTGCAACCTCTG 59.112 57.895 0.00 0.00 0.00 3.35
3320 4779 0.896940 CCAATGCCTGCAACCTCTGT 60.897 55.000 0.00 0.00 0.00 3.41
3321 4780 1.614051 CCAATGCCTGCAACCTCTGTA 60.614 52.381 0.00 0.00 0.00 2.74
3322 4781 1.741706 CAATGCCTGCAACCTCTGTAG 59.258 52.381 0.00 0.00 37.50 2.74
3335 4794 2.722094 CTCTGTAGGAGTGTGAGCTCT 58.278 52.381 16.19 0.00 37.30 4.09
3336 4795 2.682856 CTCTGTAGGAGTGTGAGCTCTC 59.317 54.545 16.19 12.36 37.30 3.20
3337 4796 2.307392 TCTGTAGGAGTGTGAGCTCTCT 59.693 50.000 16.19 10.53 36.00 3.10
3338 4797 2.682856 CTGTAGGAGTGTGAGCTCTCTC 59.317 54.545 16.19 17.77 39.78 3.20
3339 4798 2.021457 GTAGGAGTGTGAGCTCTCTCC 58.979 57.143 28.71 28.71 43.97 3.71
3340 4799 0.324275 AGGAGTGTGAGCTCTCTCCC 60.324 60.000 30.43 22.25 44.41 4.30
3341 4800 0.324275 GGAGTGTGAGCTCTCTCCCT 60.324 60.000 27.16 16.94 40.27 4.20
3342 4801 0.817013 GAGTGTGAGCTCTCTCCCTG 59.183 60.000 16.19 0.00 38.58 4.45
3343 4802 1.217779 GTGTGAGCTCTCTCCCTGC 59.782 63.158 16.19 0.00 38.58 4.85
3344 4803 1.078166 TGTGAGCTCTCTCCCTGCT 59.922 57.895 16.19 0.00 38.58 4.24
3345 4804 0.332972 TGTGAGCTCTCTCCCTGCTA 59.667 55.000 16.19 0.00 38.58 3.49
3346 4805 1.063341 TGTGAGCTCTCTCCCTGCTAT 60.063 52.381 16.19 0.00 38.58 2.97
3347 4806 1.340889 GTGAGCTCTCTCCCTGCTATG 59.659 57.143 16.19 0.00 38.58 2.23
3348 4807 1.063341 TGAGCTCTCTCCCTGCTATGT 60.063 52.381 16.19 0.00 38.58 2.29
3349 4808 2.175715 TGAGCTCTCTCCCTGCTATGTA 59.824 50.000 16.19 0.00 38.58 2.29
3350 4809 3.226777 GAGCTCTCTCCCTGCTATGTAA 58.773 50.000 6.43 0.00 37.16 2.41
3351 4810 3.831911 GAGCTCTCTCCCTGCTATGTAAT 59.168 47.826 6.43 0.00 37.16 1.89
3352 4811 4.230455 AGCTCTCTCCCTGCTATGTAATT 58.770 43.478 0.00 0.00 35.05 1.40
3353 4812 4.657969 AGCTCTCTCCCTGCTATGTAATTT 59.342 41.667 0.00 0.00 35.05 1.82
3354 4813 4.754114 GCTCTCTCCCTGCTATGTAATTTG 59.246 45.833 0.00 0.00 0.00 2.32
3355 4814 5.296151 TCTCTCCCTGCTATGTAATTTGG 57.704 43.478 0.00 0.00 0.00 3.28
3356 4815 3.817647 CTCTCCCTGCTATGTAATTTGGC 59.182 47.826 0.00 0.00 0.00 4.52
3357 4816 2.549754 CTCCCTGCTATGTAATTTGGCG 59.450 50.000 0.00 0.00 0.00 5.69
3358 4817 2.171659 TCCCTGCTATGTAATTTGGCGA 59.828 45.455 0.00 0.00 0.00 5.54
3359 4818 3.149196 CCCTGCTATGTAATTTGGCGAT 58.851 45.455 0.00 0.00 0.00 4.58
3360 4819 3.058016 CCCTGCTATGTAATTTGGCGATG 60.058 47.826 0.00 0.00 0.00 3.84
3361 4820 3.814842 CCTGCTATGTAATTTGGCGATGA 59.185 43.478 0.00 0.00 0.00 2.92
3362 4821 4.456911 CCTGCTATGTAATTTGGCGATGAT 59.543 41.667 0.00 0.00 0.00 2.45
3363 4822 5.643348 CCTGCTATGTAATTTGGCGATGATA 59.357 40.000 0.00 0.00 0.00 2.15
3364 4823 6.149308 CCTGCTATGTAATTTGGCGATGATAA 59.851 38.462 0.00 0.00 0.00 1.75
3365 4824 7.148188 CCTGCTATGTAATTTGGCGATGATAAT 60.148 37.037 0.00 0.00 0.00 1.28
3366 4825 7.529158 TGCTATGTAATTTGGCGATGATAATG 58.471 34.615 0.00 0.00 0.00 1.90
3367 4826 7.174772 TGCTATGTAATTTGGCGATGATAATGT 59.825 33.333 0.00 0.00 0.00 2.71
3368 4827 8.023128 GCTATGTAATTTGGCGATGATAATGTT 58.977 33.333 0.00 0.00 0.00 2.71
3369 4828 9.897744 CTATGTAATTTGGCGATGATAATGTTT 57.102 29.630 0.00 0.00 0.00 2.83
3378 4837 8.902540 TGGCGATGATAATGTTTATTTAGAGT 57.097 30.769 0.00 0.00 0.00 3.24
3379 4838 8.988934 TGGCGATGATAATGTTTATTTAGAGTC 58.011 33.333 0.00 0.00 0.00 3.36
3380 4839 9.209175 GGCGATGATAATGTTTATTTAGAGTCT 57.791 33.333 0.00 0.00 0.00 3.24
3396 4855 9.815306 ATTTAGAGTCTAAGGCATATAGTCAGA 57.185 33.333 12.28 0.00 0.00 3.27
3397 4856 9.815306 TTTAGAGTCTAAGGCATATAGTCAGAT 57.185 33.333 12.28 0.00 0.00 2.90
3398 4857 7.701539 AGAGTCTAAGGCATATAGTCAGATG 57.298 40.000 0.00 0.00 0.00 2.90
3399 4858 6.663093 AGAGTCTAAGGCATATAGTCAGATGG 59.337 42.308 0.00 0.00 0.00 3.51
3400 4859 5.719085 AGTCTAAGGCATATAGTCAGATGGG 59.281 44.000 0.00 0.00 0.00 4.00
3401 4860 5.717178 GTCTAAGGCATATAGTCAGATGGGA 59.283 44.000 0.00 0.00 0.00 4.37
3402 4861 6.382570 GTCTAAGGCATATAGTCAGATGGGAT 59.617 42.308 0.00 0.00 0.00 3.85
3403 4862 5.432680 AAGGCATATAGTCAGATGGGATG 57.567 43.478 0.00 0.00 0.00 3.51
3404 4863 4.433255 AGGCATATAGTCAGATGGGATGT 58.567 43.478 0.00 0.00 0.00 3.06
3405 4864 4.848660 AGGCATATAGTCAGATGGGATGTT 59.151 41.667 0.00 0.00 0.00 2.71
3406 4865 5.311649 AGGCATATAGTCAGATGGGATGTTT 59.688 40.000 0.00 0.00 0.00 2.83
3407 4866 5.413833 GGCATATAGTCAGATGGGATGTTTG 59.586 44.000 0.00 0.00 0.00 2.93
3408 4867 5.413833 GCATATAGTCAGATGGGATGTTTGG 59.586 44.000 0.00 0.00 0.00 3.28
3409 4868 6.537355 CATATAGTCAGATGGGATGTTTGGT 58.463 40.000 0.00 0.00 0.00 3.67
3410 4869 3.814504 AGTCAGATGGGATGTTTGGTT 57.185 42.857 0.00 0.00 0.00 3.67
3411 4870 3.424703 AGTCAGATGGGATGTTTGGTTG 58.575 45.455 0.00 0.00 0.00 3.77
3412 4871 3.074390 AGTCAGATGGGATGTTTGGTTGA 59.926 43.478 0.00 0.00 0.00 3.18
3413 4872 3.826157 GTCAGATGGGATGTTTGGTTGAA 59.174 43.478 0.00 0.00 0.00 2.69
3414 4873 4.081406 TCAGATGGGATGTTTGGTTGAAG 58.919 43.478 0.00 0.00 0.00 3.02
3415 4874 4.081406 CAGATGGGATGTTTGGTTGAAGA 58.919 43.478 0.00 0.00 0.00 2.87
3416 4875 4.523943 CAGATGGGATGTTTGGTTGAAGAA 59.476 41.667 0.00 0.00 0.00 2.52
3417 4876 5.010922 CAGATGGGATGTTTGGTTGAAGAAA 59.989 40.000 0.00 0.00 0.00 2.52
3418 4877 5.602145 AGATGGGATGTTTGGTTGAAGAAAA 59.398 36.000 0.00 0.00 0.00 2.29
3419 4878 5.885449 TGGGATGTTTGGTTGAAGAAAAT 57.115 34.783 0.00 0.00 0.00 1.82
3420 4879 5.609423 TGGGATGTTTGGTTGAAGAAAATG 58.391 37.500 0.00 0.00 0.00 2.32
3421 4880 5.365025 TGGGATGTTTGGTTGAAGAAAATGA 59.635 36.000 0.00 0.00 0.00 2.57
3422 4881 6.126940 TGGGATGTTTGGTTGAAGAAAATGAA 60.127 34.615 0.00 0.00 0.00 2.57
3423 4882 6.765512 GGGATGTTTGGTTGAAGAAAATGAAA 59.234 34.615 0.00 0.00 0.00 2.69
3424 4883 7.254761 GGGATGTTTGGTTGAAGAAAATGAAAC 60.255 37.037 0.00 0.00 0.00 2.78
3425 4884 7.495606 GGATGTTTGGTTGAAGAAAATGAAACT 59.504 33.333 0.00 0.00 0.00 2.66
3426 4885 7.593875 TGTTTGGTTGAAGAAAATGAAACTG 57.406 32.000 0.00 0.00 0.00 3.16
3427 4886 7.158021 TGTTTGGTTGAAGAAAATGAAACTGT 58.842 30.769 0.00 0.00 0.00 3.55
3428 4887 8.307483 TGTTTGGTTGAAGAAAATGAAACTGTA 58.693 29.630 0.00 0.00 0.00 2.74
3429 4888 9.145865 GTTTGGTTGAAGAAAATGAAACTGTAA 57.854 29.630 0.00 0.00 0.00 2.41
3430 4889 8.696410 TTGGTTGAAGAAAATGAAACTGTAAC 57.304 30.769 0.00 0.00 0.00 2.50
3431 4890 8.062065 TGGTTGAAGAAAATGAAACTGTAACT 57.938 30.769 0.00 0.00 0.00 2.24
3432 4891 9.179909 TGGTTGAAGAAAATGAAACTGTAACTA 57.820 29.630 0.00 0.00 0.00 2.24
3433 4892 9.447040 GGTTGAAGAAAATGAAACTGTAACTAC 57.553 33.333 0.00 0.00 0.00 2.73
3444 4903 8.696043 TGAAACTGTAACTACTTACTAGGACA 57.304 34.615 0.00 0.00 34.38 4.02
3445 4904 9.305555 TGAAACTGTAACTACTTACTAGGACAT 57.694 33.333 0.00 0.00 34.38 3.06
3447 4906 9.924650 AAACTGTAACTACTTACTAGGACATTG 57.075 33.333 0.00 0.00 34.38 2.82
3448 4907 8.064336 ACTGTAACTACTTACTAGGACATTGG 57.936 38.462 0.00 0.00 34.38 3.16
3449 4908 7.892241 ACTGTAACTACTTACTAGGACATTGGA 59.108 37.037 0.00 0.00 34.38 3.53
3450 4909 8.834004 TGTAACTACTTACTAGGACATTGGAT 57.166 34.615 0.00 0.00 34.38 3.41
3451 4910 9.263446 TGTAACTACTTACTAGGACATTGGATT 57.737 33.333 0.00 0.00 34.38 3.01
3454 4913 8.147244 ACTACTTACTAGGACATTGGATTTGT 57.853 34.615 0.00 0.00 0.00 2.83
3455 4914 8.603304 ACTACTTACTAGGACATTGGATTTGTT 58.397 33.333 0.00 0.00 0.00 2.83
3456 4915 9.449719 CTACTTACTAGGACATTGGATTTGTTT 57.550 33.333 0.00 0.00 0.00 2.83
3457 4916 8.336801 ACTTACTAGGACATTGGATTTGTTTC 57.663 34.615 0.00 0.00 0.00 2.78
3458 4917 8.164070 ACTTACTAGGACATTGGATTTGTTTCT 58.836 33.333 0.00 0.00 0.00 2.52
3459 4918 8.934023 TTACTAGGACATTGGATTTGTTTCTT 57.066 30.769 0.00 0.00 0.00 2.52
3460 4919 7.219484 ACTAGGACATTGGATTTGTTTCTTG 57.781 36.000 0.00 0.00 0.00 3.02
3461 4920 4.886579 AGGACATTGGATTTGTTTCTTGC 58.113 39.130 0.00 0.00 0.00 4.01
3462 4921 3.996363 GGACATTGGATTTGTTTCTTGCC 59.004 43.478 0.00 0.00 0.00 4.52
3463 4922 3.996363 GACATTGGATTTGTTTCTTGCCC 59.004 43.478 0.00 0.00 0.00 5.36
3464 4923 3.647590 ACATTGGATTTGTTTCTTGCCCT 59.352 39.130 0.00 0.00 0.00 5.19
3465 4924 4.837860 ACATTGGATTTGTTTCTTGCCCTA 59.162 37.500 0.00 0.00 0.00 3.53
3466 4925 4.864704 TTGGATTTGTTTCTTGCCCTAC 57.135 40.909 0.00 0.00 0.00 3.18
3467 4926 3.838565 TGGATTTGTTTCTTGCCCTACA 58.161 40.909 0.00 0.00 0.00 2.74
3468 4927 3.572255 TGGATTTGTTTCTTGCCCTACAC 59.428 43.478 0.00 0.00 0.00 2.90
3469 4928 3.572255 GGATTTGTTTCTTGCCCTACACA 59.428 43.478 0.00 0.00 0.00 3.72
3470 4929 4.321230 GGATTTGTTTCTTGCCCTACACAG 60.321 45.833 0.00 0.00 0.00 3.66
3471 4930 3.290948 TTGTTTCTTGCCCTACACAGT 57.709 42.857 0.00 0.00 0.00 3.55
3472 4931 4.425180 TTGTTTCTTGCCCTACACAGTA 57.575 40.909 0.00 0.00 0.00 2.74
3473 4932 3.735591 TGTTTCTTGCCCTACACAGTAC 58.264 45.455 0.00 0.00 0.00 2.73
3474 4933 3.134985 TGTTTCTTGCCCTACACAGTACA 59.865 43.478 0.00 0.00 0.00 2.90
3475 4934 3.678056 TTCTTGCCCTACACAGTACAG 57.322 47.619 0.00 0.00 0.00 2.74
3476 4935 2.605257 TCTTGCCCTACACAGTACAGT 58.395 47.619 0.00 0.00 0.00 3.55
3477 4936 2.969950 TCTTGCCCTACACAGTACAGTT 59.030 45.455 0.00 0.00 0.00 3.16
3478 4937 4.154176 TCTTGCCCTACACAGTACAGTTA 58.846 43.478 0.00 0.00 0.00 2.24
3479 4938 3.947910 TGCCCTACACAGTACAGTTAC 57.052 47.619 0.00 0.00 0.00 2.50
3480 4939 3.232662 TGCCCTACACAGTACAGTTACA 58.767 45.455 0.00 0.00 0.00 2.41
3481 4940 3.257375 TGCCCTACACAGTACAGTTACAG 59.743 47.826 0.00 0.00 0.00 2.74
3482 4941 3.368116 GCCCTACACAGTACAGTTACAGG 60.368 52.174 0.00 0.00 0.00 4.00
3483 4942 3.830755 CCCTACACAGTACAGTTACAGGT 59.169 47.826 0.00 0.00 0.00 4.00
3484 4943 4.282703 CCCTACACAGTACAGTTACAGGTT 59.717 45.833 0.00 0.00 0.00 3.50
3485 4944 5.221581 CCCTACACAGTACAGTTACAGGTTT 60.222 44.000 0.00 0.00 0.00 3.27
3486 4945 6.285990 CCTACACAGTACAGTTACAGGTTTT 58.714 40.000 0.00 0.00 0.00 2.43
3487 4946 6.423001 CCTACACAGTACAGTTACAGGTTTTC 59.577 42.308 0.00 0.00 0.00 2.29
3488 4947 5.121105 ACACAGTACAGTTACAGGTTTTCC 58.879 41.667 0.00 0.00 41.05 3.13
3489 4948 4.210537 CACAGTACAGTTACAGGTTTTCCG 59.789 45.833 0.00 0.00 46.35 4.30
3490 4949 4.141869 ACAGTACAGTTACAGGTTTTCCGT 60.142 41.667 0.00 0.00 46.35 4.69
3491 4950 4.210537 CAGTACAGTTACAGGTTTTCCGTG 59.789 45.833 0.00 0.00 46.35 4.94
3492 4951 2.567985 ACAGTTACAGGTTTTCCGTGG 58.432 47.619 0.00 0.00 46.35 4.94
3493 4952 2.092807 ACAGTTACAGGTTTTCCGTGGT 60.093 45.455 0.00 0.00 46.35 4.16
3494 4953 2.946990 CAGTTACAGGTTTTCCGTGGTT 59.053 45.455 0.00 0.00 46.35 3.67
3495 4954 3.002965 CAGTTACAGGTTTTCCGTGGTTC 59.997 47.826 0.00 0.00 46.35 3.62
3496 4955 2.259266 TACAGGTTTTCCGTGGTTCC 57.741 50.000 0.00 0.00 46.35 3.62
3497 4956 0.256464 ACAGGTTTTCCGTGGTTCCA 59.744 50.000 0.00 0.00 46.35 3.53
3498 4957 1.133606 ACAGGTTTTCCGTGGTTCCAT 60.134 47.619 0.00 0.00 46.35 3.41
3499 4958 1.960689 CAGGTTTTCCGTGGTTCCATT 59.039 47.619 0.00 0.00 46.35 3.16
3500 4959 2.030274 CAGGTTTTCCGTGGTTCCATTC 60.030 50.000 0.00 0.00 46.35 2.67
3501 4960 1.068816 GGTTTTCCGTGGTTCCATTCG 60.069 52.381 0.00 0.00 0.00 3.34
3502 4961 1.605232 GTTTTCCGTGGTTCCATTCGT 59.395 47.619 0.00 0.00 0.00 3.85
3503 4962 1.970092 TTTCCGTGGTTCCATTCGTT 58.030 45.000 0.00 0.00 0.00 3.85
3504 4963 1.515081 TTCCGTGGTTCCATTCGTTC 58.485 50.000 0.00 0.00 0.00 3.95
3505 4964 0.320946 TCCGTGGTTCCATTCGTTCC 60.321 55.000 0.00 0.00 0.00 3.62
3506 4965 1.303091 CCGTGGTTCCATTCGTTCCC 61.303 60.000 0.00 0.00 0.00 3.97
3507 4966 0.321298 CGTGGTTCCATTCGTTCCCT 60.321 55.000 0.00 0.00 0.00 4.20
3508 4967 1.165270 GTGGTTCCATTCGTTCCCTG 58.835 55.000 0.00 0.00 0.00 4.45
3509 4968 0.608035 TGGTTCCATTCGTTCCCTGC 60.608 55.000 0.00 0.00 0.00 4.85
3510 4969 0.608035 GGTTCCATTCGTTCCCTGCA 60.608 55.000 0.00 0.00 0.00 4.41
3511 4970 1.243902 GTTCCATTCGTTCCCTGCAA 58.756 50.000 0.00 0.00 0.00 4.08
3512 4971 1.200020 GTTCCATTCGTTCCCTGCAAG 59.800 52.381 0.00 0.00 0.00 4.01
3513 4972 0.960364 TCCATTCGTTCCCTGCAAGC 60.960 55.000 0.00 0.00 0.00 4.01
3514 4973 1.508088 CATTCGTTCCCTGCAAGCC 59.492 57.895 0.00 0.00 0.00 4.35
3515 4974 0.962356 CATTCGTTCCCTGCAAGCCT 60.962 55.000 0.00 0.00 0.00 4.58
3516 4975 0.251341 ATTCGTTCCCTGCAAGCCTT 60.251 50.000 0.00 0.00 0.00 4.35
3517 4976 1.172180 TTCGTTCCCTGCAAGCCTTG 61.172 55.000 0.00 0.00 0.00 3.61
3518 4977 2.629656 CGTTCCCTGCAAGCCTTGG 61.630 63.158 6.57 0.00 0.00 3.61
3519 4978 2.601367 TTCCCTGCAAGCCTTGGC 60.601 61.111 6.57 2.97 0.00 4.52
3520 4979 3.150903 TTCCCTGCAAGCCTTGGCT 62.151 57.895 8.56 8.56 0.00 4.75
3521 4980 3.379445 CCCTGCAAGCCTTGGCTG 61.379 66.667 15.52 10.27 0.00 4.85
3522 4981 3.379445 CCTGCAAGCCTTGGCTGG 61.379 66.667 15.52 13.45 41.67 4.85
3523 4982 2.282674 CTGCAAGCCTTGGCTGGA 60.283 61.111 19.49 11.53 0.00 3.86
3524 4983 1.904865 CTGCAAGCCTTGGCTGGAA 60.905 57.895 19.49 8.41 0.00 3.53
3525 4984 1.457267 TGCAAGCCTTGGCTGGAAA 60.457 52.632 19.49 4.17 0.00 3.13
3526 4985 1.005748 GCAAGCCTTGGCTGGAAAC 60.006 57.895 19.49 0.00 0.00 2.78
3527 4986 1.747325 GCAAGCCTTGGCTGGAAACA 61.747 55.000 19.49 0.00 39.59 2.83
3528 4987 0.752054 CAAGCCTTGGCTGGAAACAA 59.248 50.000 15.52 0.00 42.06 2.83
3529 4988 1.345415 CAAGCCTTGGCTGGAAACAAT 59.655 47.619 15.52 0.00 42.06 2.71
3530 4989 2.562298 CAAGCCTTGGCTGGAAACAATA 59.438 45.455 15.52 0.00 42.06 1.90
3531 4990 2.171003 AGCCTTGGCTGGAAACAATAC 58.829 47.619 13.99 0.00 42.06 1.89
3532 4991 1.892474 GCCTTGGCTGGAAACAATACA 59.108 47.619 4.11 0.00 42.06 2.29
3533 4992 2.497273 GCCTTGGCTGGAAACAATACAT 59.503 45.455 4.11 0.00 42.06 2.29
3534 4993 3.676873 GCCTTGGCTGGAAACAATACATG 60.677 47.826 4.11 0.00 42.06 3.21
3535 4994 3.763360 CCTTGGCTGGAAACAATACATGA 59.237 43.478 0.00 0.00 42.06 3.07
3536 4995 4.403432 CCTTGGCTGGAAACAATACATGAT 59.597 41.667 0.00 0.00 42.06 2.45
3537 4996 5.593909 CCTTGGCTGGAAACAATACATGATA 59.406 40.000 0.00 0.00 42.06 2.15
3538 4997 6.266103 CCTTGGCTGGAAACAATACATGATAT 59.734 38.462 0.00 0.00 42.06 1.63
3539 4998 6.882610 TGGCTGGAAACAATACATGATATC 57.117 37.500 0.00 0.00 42.06 1.63
3540 4999 5.769662 TGGCTGGAAACAATACATGATATCC 59.230 40.000 0.00 0.00 42.06 2.59
3541 5000 5.106555 GGCTGGAAACAATACATGATATCCG 60.107 44.000 0.00 0.00 42.06 4.18
3542 5001 5.470098 GCTGGAAACAATACATGATATCCGT 59.530 40.000 0.00 0.16 42.06 4.69
3543 5002 6.566564 GCTGGAAACAATACATGATATCCGTG 60.567 42.308 0.00 2.09 42.06 4.94
3544 5003 5.762711 TGGAAACAATACATGATATCCGTGG 59.237 40.000 0.00 0.00 37.44 4.94
3545 5004 5.995282 GGAAACAATACATGATATCCGTGGA 59.005 40.000 0.00 0.00 36.10 4.02
3546 5005 6.485313 GGAAACAATACATGATATCCGTGGAA 59.515 38.462 0.00 0.00 36.10 3.53
3547 5006 7.012894 GGAAACAATACATGATATCCGTGGAAA 59.987 37.037 0.00 0.00 36.10 3.13
3548 5007 7.496529 AACAATACATGATATCCGTGGAAAG 57.503 36.000 0.00 0.00 36.10 2.62
3549 5008 5.997746 ACAATACATGATATCCGTGGAAAGG 59.002 40.000 0.00 0.00 36.10 3.11
3565 5024 4.008074 GAAAGGATCCACAGACAAGACA 57.992 45.455 15.82 0.00 0.00 3.41
3566 5025 3.409026 AAGGATCCACAGACAAGACAC 57.591 47.619 15.82 0.00 0.00 3.67
3567 5026 1.625818 AGGATCCACAGACAAGACACC 59.374 52.381 15.82 0.00 0.00 4.16
3568 5027 1.347707 GGATCCACAGACAAGACACCA 59.652 52.381 6.95 0.00 0.00 4.17
3569 5028 2.224523 GGATCCACAGACAAGACACCAA 60.225 50.000 6.95 0.00 0.00 3.67
3570 5029 2.620251 TCCACAGACAAGACACCAAG 57.380 50.000 0.00 0.00 0.00 3.61
3571 5030 0.947244 CCACAGACAAGACACCAAGC 59.053 55.000 0.00 0.00 0.00 4.01
3572 5031 1.667236 CACAGACAAGACACCAAGCA 58.333 50.000 0.00 0.00 0.00 3.91
3573 5032 1.600957 CACAGACAAGACACCAAGCAG 59.399 52.381 0.00 0.00 0.00 4.24
3574 5033 0.590195 CAGACAAGACACCAAGCAGC 59.410 55.000 0.00 0.00 0.00 5.25
3575 5034 0.181114 AGACAAGACACCAAGCAGCA 59.819 50.000 0.00 0.00 0.00 4.41
3576 5035 1.024271 GACAAGACACCAAGCAGCAA 58.976 50.000 0.00 0.00 0.00 3.91
3577 5036 1.405105 GACAAGACACCAAGCAGCAAA 59.595 47.619 0.00 0.00 0.00 3.68
3578 5037 1.134946 ACAAGACACCAAGCAGCAAAC 59.865 47.619 0.00 0.00 0.00 2.93
3579 5038 1.134753 CAAGACACCAAGCAGCAAACA 59.865 47.619 0.00 0.00 0.00 2.83
3580 5039 0.740737 AGACACCAAGCAGCAAACAC 59.259 50.000 0.00 0.00 0.00 3.32
3581 5040 0.740737 GACACCAAGCAGCAAACACT 59.259 50.000 0.00 0.00 0.00 3.55
3582 5041 0.457035 ACACCAAGCAGCAAACACTG 59.543 50.000 0.00 0.00 40.80 3.66
3720 5179 6.993079 AGTCATTTTCCAACCATTTAAGGTC 58.007 36.000 0.00 0.00 42.25 3.85
3765 5224 8.932945 TTGTGTATATTGTTTGCTGTGAAAAA 57.067 26.923 0.00 0.00 0.00 1.94
3766 5225 9.539825 TTGTGTATATTGTTTGCTGTGAAAAAT 57.460 25.926 0.00 0.00 0.00 1.82
3767 5226 9.190858 TGTGTATATTGTTTGCTGTGAAAAATC 57.809 29.630 0.00 0.00 0.00 2.17
3768 5227 9.410556 GTGTATATTGTTTGCTGTGAAAAATCT 57.589 29.630 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.105128 CCCTCGACCACTCGCATC 59.895 66.667 0.00 0.00 39.96 3.91
7 8 2.574399 GCAGACCCTCGACCACTC 59.426 66.667 0.00 0.00 0.00 3.51
8 9 3.374402 CGCAGACCCTCGACCACT 61.374 66.667 0.00 0.00 0.00 4.00
22 23 0.613260 AGTAAGGCATCTCCAACGCA 59.387 50.000 0.00 0.00 37.29 5.24
24 25 4.113354 GAGTAAGTAAGGCATCTCCAACG 58.887 47.826 0.00 0.00 37.29 4.10
51 52 0.461870 AGTCTGCAACACTCAACGCA 60.462 50.000 0.00 0.00 0.00 5.24
53 54 3.059884 ACATAGTCTGCAACACTCAACG 58.940 45.455 1.20 0.00 0.00 4.10
57 58 4.931601 TCAATCACATAGTCTGCAACACTC 59.068 41.667 1.20 0.00 0.00 3.51
62 63 6.643388 AGTGTATCAATCACATAGTCTGCAA 58.357 36.000 0.00 0.00 38.16 4.08
63 64 6.225981 AGTGTATCAATCACATAGTCTGCA 57.774 37.500 0.00 0.00 38.16 4.41
67 68 7.987268 TTCGAAGTGTATCAATCACATAGTC 57.013 36.000 0.00 0.00 38.16 2.59
89 90 4.504097 GCAGTTTGTGTGTCCTGAAAATTC 59.496 41.667 0.00 0.00 0.00 2.17
98 102 1.355210 CCGTGCAGTTTGTGTGTCC 59.645 57.895 0.00 0.00 0.00 4.02
149 153 4.370364 TTTCGGAGCATCTAAAAATGGC 57.630 40.909 0.00 0.00 33.73 4.40
157 161 6.378582 GTTGTTTGAAATTTCGGAGCATCTA 58.621 36.000 13.34 0.00 33.73 1.98
166 170 7.879962 TTGTACTACGTTGTTTGAAATTTCG 57.120 32.000 8.18 2.92 0.00 3.46
167 171 8.247774 CGTTTGTACTACGTTGTTTGAAATTTC 58.752 33.333 11.41 11.41 34.47 2.17
188 192 7.043722 TGGAATTTGAACTTTCGATTTCGTTTG 60.044 33.333 0.00 0.00 40.80 2.93
197 201 4.202172 GGGGTTTGGAATTTGAACTTTCGA 60.202 41.667 0.00 0.00 0.00 3.71
198 202 4.055360 GGGGTTTGGAATTTGAACTTTCG 58.945 43.478 0.00 0.00 0.00 3.46
199 203 5.029807 TGGGGTTTGGAATTTGAACTTTC 57.970 39.130 0.00 0.00 0.00 2.62
200 204 5.443230 TTGGGGTTTGGAATTTGAACTTT 57.557 34.783 0.00 0.00 0.00 2.66
205 210 2.103263 CGGTTTGGGGTTTGGAATTTGA 59.897 45.455 0.00 0.00 0.00 2.69
234 239 2.379459 GCCTTCCCTTCCCTCCCTC 61.379 68.421 0.00 0.00 0.00 4.30
311 1251 0.313987 GAAAAGGGCGGGTGTTTCTG 59.686 55.000 0.00 0.00 0.00 3.02
329 1269 2.931649 GGGAGGGGTCGGTTTGGA 60.932 66.667 0.00 0.00 0.00 3.53
400 1340 2.276740 GCACTCCCTTCCCATGGG 59.723 66.667 26.30 26.30 45.90 4.00
404 1344 3.706373 GCTCGCACTCCCTTCCCA 61.706 66.667 0.00 0.00 0.00 4.37
415 1355 1.003839 AGACATTTTCCCGCTCGCA 60.004 52.632 0.00 0.00 0.00 5.10
432 1372 4.536687 GAAATTGGCGCCCGCGAG 62.537 66.667 26.77 0.00 43.06 5.03
438 1378 2.121538 GGAGGGAGAAATTGGCGCC 61.122 63.158 22.73 22.73 0.00 6.53
439 1379 2.121538 GGGAGGGAGAAATTGGCGC 61.122 63.158 0.00 0.00 0.00 6.53
440 1380 0.106519 ATGGGAGGGAGAAATTGGCG 60.107 55.000 0.00 0.00 0.00 5.69
441 1381 2.034878 GAATGGGAGGGAGAAATTGGC 58.965 52.381 0.00 0.00 0.00 4.52
442 1382 3.677156 AGAATGGGAGGGAGAAATTGG 57.323 47.619 0.00 0.00 0.00 3.16
443 1383 4.403752 GGAAAGAATGGGAGGGAGAAATTG 59.596 45.833 0.00 0.00 0.00 2.32
444 1384 4.614475 GGAAAGAATGGGAGGGAGAAATT 58.386 43.478 0.00 0.00 0.00 1.82
445 1385 3.372025 CGGAAAGAATGGGAGGGAGAAAT 60.372 47.826 0.00 0.00 0.00 2.17
446 1386 2.026262 CGGAAAGAATGGGAGGGAGAAA 60.026 50.000 0.00 0.00 0.00 2.52
447 1387 1.559682 CGGAAAGAATGGGAGGGAGAA 59.440 52.381 0.00 0.00 0.00 2.87
448 1388 1.204146 CGGAAAGAATGGGAGGGAGA 58.796 55.000 0.00 0.00 0.00 3.71
484 1424 1.630035 GGGGGTTAATAGGGGGAGTGT 60.630 57.143 0.00 0.00 0.00 3.55
485 1425 1.146452 GGGGGTTAATAGGGGGAGTG 58.854 60.000 0.00 0.00 0.00 3.51
486 1426 3.689141 GGGGGTTAATAGGGGGAGT 57.311 57.895 0.00 0.00 0.00 3.85
507 1447 1.004758 TGGAGGAGAGGGGAATGGG 59.995 63.158 0.00 0.00 0.00 4.00
1329 2625 0.039035 AAATGTAAAGAGGGGCGGCA 59.961 50.000 12.47 0.00 0.00 5.69
1343 2651 1.250840 GGGCCAGCGGAAAGAAATGT 61.251 55.000 4.39 0.00 0.00 2.71
1345 2653 0.681243 GAGGGCCAGCGGAAAGAAAT 60.681 55.000 6.18 0.00 0.00 2.17
1348 2656 2.185310 GAAGAGGGCCAGCGGAAAGA 62.185 60.000 6.18 0.00 0.00 2.52
1349 2657 1.746991 GAAGAGGGCCAGCGGAAAG 60.747 63.158 6.18 0.00 0.00 2.62
1350 2658 2.351276 GAAGAGGGCCAGCGGAAA 59.649 61.111 6.18 0.00 0.00 3.13
1351 2659 4.082523 CGAAGAGGGCCAGCGGAA 62.083 66.667 6.18 0.00 0.00 4.30
1353 2661 2.907897 CTAACGAAGAGGGCCAGCGG 62.908 65.000 6.18 0.00 0.00 5.52
1354 2662 1.519455 CTAACGAAGAGGGCCAGCG 60.519 63.158 6.18 6.03 0.00 5.18
1355 2663 1.815840 GCTAACGAAGAGGGCCAGC 60.816 63.158 6.18 0.00 0.00 4.85
1356 2664 1.153349 GGCTAACGAAGAGGGCCAG 60.153 63.158 6.18 0.00 42.08 4.85
1357 2665 2.987125 GGCTAACGAAGAGGGCCA 59.013 61.111 6.18 0.00 42.08 5.36
1377 2688 0.245539 CACGGTTACCATCGACACCT 59.754 55.000 1.13 0.00 0.00 4.00
1588 2915 3.873361 GCAGCAGAGCACAATAATACAGA 59.127 43.478 0.00 0.00 0.00 3.41
1602 2931 2.001159 GAGATGACAAGTGCAGCAGAG 58.999 52.381 0.00 0.00 0.00 3.35
1647 3010 7.148018 CCTTGGTGACAGAAATAATAACTGCAT 60.148 37.037 0.00 0.00 44.54 3.96
1833 3206 3.201290 CAATTGGGATTCCTGACTCTCG 58.799 50.000 2.01 0.00 0.00 4.04
1889 3262 4.395854 TGTGGCTGACTATTTATGTTGCTG 59.604 41.667 0.00 0.00 0.00 4.41
1909 3282 5.707298 ACAATCTGGTTGAGAATTAGGTGTG 59.293 40.000 7.81 0.00 40.37 3.82
1910 3283 5.880901 ACAATCTGGTTGAGAATTAGGTGT 58.119 37.500 7.81 0.00 40.37 4.16
1912 3285 8.164070 AGTAAACAATCTGGTTGAGAATTAGGT 58.836 33.333 7.81 0.00 40.37 3.08
1913 3286 8.567285 AGTAAACAATCTGGTTGAGAATTAGG 57.433 34.615 7.81 0.00 40.37 2.69
1953 3338 8.450964 CGATAACTACCAAATAGCCCAAATATG 58.549 37.037 0.00 0.00 33.73 1.78
1962 3347 4.443394 CACCGACGATAACTACCAAATAGC 59.557 45.833 0.00 0.00 33.73 2.97
1964 3349 5.581126 ACACCGACGATAACTACCAAATA 57.419 39.130 0.00 0.00 0.00 1.40
2007 3396 6.017687 GTGCATCTATGAATAGACATGTTGCA 60.018 38.462 16.19 16.19 41.77 4.08
2008 3397 6.017687 TGTGCATCTATGAATAGACATGTTGC 60.018 38.462 0.00 12.70 41.77 4.17
2019 3408 4.744867 GCAGGGTAGTGTGCATCTATGAAT 60.745 45.833 0.00 0.00 39.62 2.57
2062 3461 7.412853 CAGACTGCCATTTTAAGCTGTATAAG 58.587 38.462 0.00 0.00 40.68 1.73
2066 3465 3.440173 GCAGACTGCCATTTTAAGCTGTA 59.560 43.478 17.01 0.00 40.68 2.74
2068 3467 2.229543 TGCAGACTGCCATTTTAAGCTG 59.770 45.455 24.33 0.00 44.23 4.24
2080 3479 2.370281 TGTAGCTAACTGCAGACTGC 57.630 50.000 23.35 20.86 45.94 4.40
2161 3561 7.833285 AAGGGATGTAACAAACTAACAACAT 57.167 32.000 0.00 0.00 0.00 2.71
2182 3582 0.239347 CAAGCTTCCGCAGACAAAGG 59.761 55.000 0.00 0.00 39.10 3.11
2191 3591 0.884704 TGTTGGACTCAAGCTTCCGC 60.885 55.000 0.00 0.00 34.24 5.54
2193 3593 3.823304 AGATTTGTTGGACTCAAGCTTCC 59.177 43.478 0.00 0.00 32.92 3.46
2198 3598 8.091449 AGTTCTAGTAGATTTGTTGGACTCAAG 58.909 37.037 0.00 0.00 32.92 3.02
2211 3611 6.723298 ATGTAGCTGCAGTTCTAGTAGATT 57.277 37.500 16.64 0.00 0.00 2.40
2264 3667 4.148838 CAGGGTCCACCAAAATTACTTCA 58.851 43.478 0.00 0.00 43.89 3.02
2265 3668 4.149598 ACAGGGTCCACCAAAATTACTTC 58.850 43.478 0.00 0.00 43.89 3.01
2277 3680 0.533032 GCTCAGAGTACAGGGTCCAC 59.467 60.000 0.00 0.00 0.00 4.02
2366 3788 0.792640 GTTCACTGATGGCACTGACG 59.207 55.000 0.00 0.00 0.00 4.35
2374 3798 9.612620 GTAAAAGTCTTATTTGTTCACTGATGG 57.387 33.333 0.00 0.00 0.00 3.51
2397 3825 5.189736 ACTCCACATGGATTAAGCTGAGTAA 59.810 40.000 0.00 0.00 44.46 2.24
2400 3828 4.148128 ACTCCACATGGATTAAGCTGAG 57.852 45.455 0.00 0.00 44.46 3.35
2410 3838 5.905331 AGGTGAGATAAATACTCCACATGGA 59.095 40.000 0.00 0.00 43.08 3.41
2494 3926 3.418684 ACTGGTACATGTCCCTGAAAC 57.581 47.619 19.20 2.93 38.20 2.78
2510 3942 7.712639 ACAAACAGTCATTAGCTATCATACTGG 59.287 37.037 20.80 11.57 37.71 4.00
2827 4261 4.708177 CCTTCACTTCCTTGTCTTCTTCA 58.292 43.478 0.00 0.00 0.00 3.02
2828 4262 3.500299 GCCTTCACTTCCTTGTCTTCTTC 59.500 47.826 0.00 0.00 0.00 2.87
2829 4263 3.117888 TGCCTTCACTTCCTTGTCTTCTT 60.118 43.478 0.00 0.00 0.00 2.52
2830 4264 2.439507 TGCCTTCACTTCCTTGTCTTCT 59.560 45.455 0.00 0.00 0.00 2.85
2843 4281 2.100584 TGAAACACAACCATGCCTTCAC 59.899 45.455 0.00 0.00 0.00 3.18
2877 4315 1.485066 ACTAGGGGAATGTAGGCAACG 59.515 52.381 0.00 0.00 46.39 4.10
3014 4452 3.159213 AGACCAACATTCAGCAATGGA 57.841 42.857 2.24 0.00 43.47 3.41
3015 4453 3.947910 AAGACCAACATTCAGCAATGG 57.052 42.857 2.24 0.00 43.47 3.16
3016 4454 6.925165 AGTTAAAAGACCAACATTCAGCAATG 59.075 34.615 0.00 0.00 44.57 2.82
3017 4455 7.054491 AGTTAAAAGACCAACATTCAGCAAT 57.946 32.000 0.00 0.00 0.00 3.56
3018 4456 6.463995 AGTTAAAAGACCAACATTCAGCAA 57.536 33.333 0.00 0.00 0.00 3.91
3019 4457 6.096141 TGAAGTTAAAAGACCAACATTCAGCA 59.904 34.615 0.00 0.00 0.00 4.41
3020 4458 6.503524 TGAAGTTAAAAGACCAACATTCAGC 58.496 36.000 0.00 0.00 0.00 4.26
3021 4459 7.596248 CCATGAAGTTAAAAGACCAACATTCAG 59.404 37.037 0.00 0.00 31.58 3.02
3022 4460 7.286546 TCCATGAAGTTAAAAGACCAACATTCA 59.713 33.333 0.00 0.00 32.08 2.57
3023 4461 7.657336 TCCATGAAGTTAAAAGACCAACATTC 58.343 34.615 0.00 0.00 0.00 2.67
3024 4462 7.595819 TCCATGAAGTTAAAAGACCAACATT 57.404 32.000 0.00 0.00 0.00 2.71
3025 4463 7.781324 ATCCATGAAGTTAAAAGACCAACAT 57.219 32.000 0.00 0.00 0.00 2.71
3026 4464 7.595819 AATCCATGAAGTTAAAAGACCAACA 57.404 32.000 0.00 0.00 0.00 3.33
3027 4465 8.887036 AAAATCCATGAAGTTAAAAGACCAAC 57.113 30.769 0.00 0.00 0.00 3.77
3028 4466 8.147704 GGAAAATCCATGAAGTTAAAAGACCAA 58.852 33.333 0.00 0.00 36.28 3.67
3029 4467 7.288852 TGGAAAATCCATGAAGTTAAAAGACCA 59.711 33.333 0.00 0.00 42.67 4.02
3030 4468 7.666623 TGGAAAATCCATGAAGTTAAAAGACC 58.333 34.615 0.00 0.00 42.67 3.85
3046 4484 4.632688 CCAACATTCAGCAATGGAAAATCC 59.367 41.667 2.24 0.00 43.47 3.01
3047 4485 5.240121 ACCAACATTCAGCAATGGAAAATC 58.760 37.500 2.24 0.00 43.47 2.17
3048 4486 5.012354 AGACCAACATTCAGCAATGGAAAAT 59.988 36.000 2.24 0.00 43.47 1.82
3049 4487 4.344679 AGACCAACATTCAGCAATGGAAAA 59.655 37.500 2.24 0.00 43.47 2.29
3050 4488 3.896888 AGACCAACATTCAGCAATGGAAA 59.103 39.130 2.24 0.00 43.47 3.13
3051 4489 3.499338 AGACCAACATTCAGCAATGGAA 58.501 40.909 2.24 0.00 43.47 3.53
3052 4490 3.159213 AGACCAACATTCAGCAATGGA 57.841 42.857 2.24 0.00 43.47 3.41
3059 4497 8.621286 ACAAGTAGTTAAAAGACCAACATTCAG 58.379 33.333 0.00 0.00 0.00 3.02
3077 4515 5.304614 ACCAACAGTCACAGATACAAGTAGT 59.695 40.000 0.00 0.00 0.00 2.73
3107 4545 5.351465 CCTAACAATAACAGCACTGGTGTAG 59.649 44.000 14.12 6.25 43.73 2.74
3127 4565 5.951148 TCAATCAATCCAAGTCATTGCCTAA 59.049 36.000 0.00 0.00 34.91 2.69
3161 4620 0.330604 ACTGCAGCATCCACCTGATT 59.669 50.000 15.27 0.00 32.03 2.57
3234 4693 3.663176 GCAGCTCCGCAACTTGCA 61.663 61.111 14.10 0.00 45.36 4.08
3235 4694 4.410743 GGCAGCTCCGCAACTTGC 62.411 66.667 3.44 3.44 40.69 4.01
3236 4695 2.979676 TGGCAGCTCCGCAACTTG 60.980 61.111 0.00 0.00 37.80 3.16
3237 4696 2.111999 TAGTGGCAGCTCCGCAACTT 62.112 55.000 11.08 0.00 43.97 2.66
3242 4701 4.082523 TGGTAGTGGCAGCTCCGC 62.083 66.667 7.45 7.45 45.76 5.54
3243 4702 2.185350 CTGGTAGTGGCAGCTCCG 59.815 66.667 0.00 0.00 37.80 4.63
3244 4703 2.586792 CCTGGTAGTGGCAGCTCC 59.413 66.667 0.00 0.00 0.00 4.70
3245 4704 2.586792 CCCTGGTAGTGGCAGCTC 59.413 66.667 0.00 0.00 0.00 4.09
3246 4705 2.471084 TACCCCTGGTAGTGGCAGCT 62.471 60.000 0.00 0.00 37.09 4.24
3247 4706 1.993391 TACCCCTGGTAGTGGCAGC 60.993 63.158 0.00 0.00 37.09 5.25
3248 4707 1.623542 GGTACCCCTGGTAGTGGCAG 61.624 65.000 0.00 0.00 39.02 4.85
3249 4708 1.614226 GGTACCCCTGGTAGTGGCA 60.614 63.158 0.00 0.00 39.02 4.92
3250 4709 1.306739 AGGTACCCCTGGTAGTGGC 60.307 63.158 8.74 0.00 40.58 5.01
3251 4710 0.690077 GGAGGTACCCCTGGTAGTGG 60.690 65.000 8.74 0.00 42.86 4.00
3252 4711 0.042131 TGGAGGTACCCCTGGTAGTG 59.958 60.000 8.74 0.00 42.86 2.74
3253 4712 0.338814 CTGGAGGTACCCCTGGTAGT 59.661 60.000 8.74 0.00 42.86 2.73
3254 4713 0.338814 ACTGGAGGTACCCCTGGTAG 59.661 60.000 21.91 13.44 42.86 3.18
3255 4714 0.794934 AACTGGAGGTACCCCTGGTA 59.205 55.000 21.91 4.83 42.86 3.25
3256 4715 0.104090 AAACTGGAGGTACCCCTGGT 60.104 55.000 21.91 16.56 42.86 4.00
3257 4716 1.073098 AAAACTGGAGGTACCCCTGG 58.927 55.000 21.91 15.66 42.86 4.45
3258 4717 4.077108 GTTTAAAACTGGAGGTACCCCTG 58.923 47.826 8.74 15.22 42.86 4.45
3259 4718 3.723154 TGTTTAAAACTGGAGGTACCCCT 59.277 43.478 8.74 0.00 46.66 4.79
3260 4719 4.103013 TGTTTAAAACTGGAGGTACCCC 57.897 45.455 8.74 10.37 38.00 4.95
3261 4720 5.106436 CGATTGTTTAAAACTGGAGGTACCC 60.106 44.000 8.74 0.00 38.00 3.69
3262 4721 5.471116 ACGATTGTTTAAAACTGGAGGTACC 59.529 40.000 2.73 2.73 39.54 3.34
3263 4722 6.549912 ACGATTGTTTAAAACTGGAGGTAC 57.450 37.500 0.00 0.00 0.00 3.34
3264 4723 6.513720 GCAACGATTGTTTAAAACTGGAGGTA 60.514 38.462 0.00 0.00 35.72 3.08
3265 4724 5.735070 GCAACGATTGTTTAAAACTGGAGGT 60.735 40.000 0.00 0.00 35.72 3.85
3266 4725 4.679654 GCAACGATTGTTTAAAACTGGAGG 59.320 41.667 0.00 0.00 35.72 4.30
3267 4726 4.679654 GGCAACGATTGTTTAAAACTGGAG 59.320 41.667 0.00 0.00 35.72 3.86
3268 4727 4.612943 GGCAACGATTGTTTAAAACTGGA 58.387 39.130 0.00 0.00 35.72 3.86
3269 4728 4.965042 GGCAACGATTGTTTAAAACTGG 57.035 40.909 0.00 0.00 35.72 4.00
3293 4752 2.571757 CAGGCATTGGCAGCAGTG 59.428 61.111 13.20 0.00 43.71 3.66
3294 4753 3.379445 GCAGGCATTGGCAGCAGT 61.379 61.111 20.36 0.00 43.71 4.40
3295 4754 3.378602 TGCAGGCATTGGCAGCAG 61.379 61.111 23.32 6.86 44.26 4.24
3296 4755 2.918276 TTGCAGGCATTGGCAGCA 60.918 55.556 23.32 23.32 46.37 4.41
3297 4756 2.433664 GTTGCAGGCATTGGCAGC 60.434 61.111 18.83 18.83 43.71 5.25
3298 4757 2.221906 GAGGTTGCAGGCATTGGCAG 62.222 60.000 13.20 5.57 43.71 4.85
3299 4758 2.203669 AGGTTGCAGGCATTGGCA 60.204 55.556 13.20 0.00 43.71 4.92
3300 4759 1.980772 AGAGGTTGCAGGCATTGGC 60.981 57.895 1.17 1.17 40.13 4.52
3301 4760 0.896940 ACAGAGGTTGCAGGCATTGG 60.897 55.000 0.00 0.00 0.00 3.16
3302 4761 1.741706 CTACAGAGGTTGCAGGCATTG 59.258 52.381 0.00 0.00 0.00 2.82
3303 4762 1.340405 CCTACAGAGGTTGCAGGCATT 60.340 52.381 0.00 0.00 38.16 3.56
3304 4763 0.254178 CCTACAGAGGTTGCAGGCAT 59.746 55.000 0.00 0.00 38.16 4.40
3305 4764 0.835971 TCCTACAGAGGTTGCAGGCA 60.836 55.000 0.00 0.00 44.19 4.75
3306 4765 0.107945 CTCCTACAGAGGTTGCAGGC 60.108 60.000 0.00 0.00 44.19 4.85
3315 4774 5.453889 GAGAGAGCTCACACTCCTACAGAG 61.454 54.167 17.77 0.00 43.52 3.35
3316 4775 2.307392 AGAGAGCTCACACTCCTACAGA 59.693 50.000 17.77 0.00 37.39 3.41
3317 4776 2.682856 GAGAGAGCTCACACTCCTACAG 59.317 54.545 17.77 0.00 40.96 2.74
3318 4777 2.619332 GGAGAGAGCTCACACTCCTACA 60.619 54.545 30.02 0.00 43.64 2.74
3319 4778 2.021457 GGAGAGAGCTCACACTCCTAC 58.979 57.143 30.02 15.40 43.64 3.18
3320 4779 1.064314 GGGAGAGAGCTCACACTCCTA 60.064 57.143 32.78 0.00 44.25 2.94
3321 4780 0.324275 GGGAGAGAGCTCACACTCCT 60.324 60.000 32.78 16.51 44.25 3.69
3322 4781 2.198183 GGGAGAGAGCTCACACTCC 58.802 63.158 29.74 29.74 44.25 3.85
3327 4786 1.340889 CATAGCAGGGAGAGAGCTCAC 59.659 57.143 17.77 10.21 45.22 3.51
3328 4787 1.063341 ACATAGCAGGGAGAGAGCTCA 60.063 52.381 17.77 0.00 43.14 4.26
3329 4788 1.703411 ACATAGCAGGGAGAGAGCTC 58.297 55.000 5.27 5.27 39.68 4.09
3330 4789 3.320610 TTACATAGCAGGGAGAGAGCT 57.679 47.619 0.00 0.00 42.14 4.09
3331 4790 4.615588 AATTACATAGCAGGGAGAGAGC 57.384 45.455 0.00 0.00 0.00 4.09
3332 4791 5.303971 CCAAATTACATAGCAGGGAGAGAG 58.696 45.833 0.00 0.00 0.00 3.20
3333 4792 4.444876 GCCAAATTACATAGCAGGGAGAGA 60.445 45.833 0.00 0.00 0.00 3.10
3334 4793 3.817647 GCCAAATTACATAGCAGGGAGAG 59.182 47.826 0.00 0.00 0.00 3.20
3335 4794 3.744214 CGCCAAATTACATAGCAGGGAGA 60.744 47.826 0.00 0.00 0.00 3.71
3336 4795 2.549754 CGCCAAATTACATAGCAGGGAG 59.450 50.000 0.00 0.00 0.00 4.30
3337 4796 2.171659 TCGCCAAATTACATAGCAGGGA 59.828 45.455 0.00 0.00 0.00 4.20
3338 4797 2.571212 TCGCCAAATTACATAGCAGGG 58.429 47.619 0.00 0.00 0.00 4.45
3339 4798 3.814842 TCATCGCCAAATTACATAGCAGG 59.185 43.478 0.00 0.00 0.00 4.85
3340 4799 5.618056 ATCATCGCCAAATTACATAGCAG 57.382 39.130 0.00 0.00 0.00 4.24
3341 4800 7.174772 ACATTATCATCGCCAAATTACATAGCA 59.825 33.333 0.00 0.00 0.00 3.49
3342 4801 7.530010 ACATTATCATCGCCAAATTACATAGC 58.470 34.615 0.00 0.00 0.00 2.97
3343 4802 9.897744 AAACATTATCATCGCCAAATTACATAG 57.102 29.630 0.00 0.00 0.00 2.23
3352 4811 9.337396 ACTCTAAATAAACATTATCATCGCCAA 57.663 29.630 0.00 0.00 0.00 4.52
3353 4812 8.902540 ACTCTAAATAAACATTATCATCGCCA 57.097 30.769 0.00 0.00 0.00 5.69
3354 4813 9.209175 AGACTCTAAATAAACATTATCATCGCC 57.791 33.333 0.00 0.00 0.00 5.54
3370 4829 9.815306 TCTGACTATATGCCTTAGACTCTAAAT 57.185 33.333 0.19 0.00 0.00 1.40
3371 4830 9.815306 ATCTGACTATATGCCTTAGACTCTAAA 57.185 33.333 0.19 0.00 0.00 1.85
3372 4831 9.237187 CATCTGACTATATGCCTTAGACTCTAA 57.763 37.037 0.00 0.00 0.00 2.10
3373 4832 7.831690 CCATCTGACTATATGCCTTAGACTCTA 59.168 40.741 0.00 0.00 0.00 2.43
3374 4833 6.663093 CCATCTGACTATATGCCTTAGACTCT 59.337 42.308 0.00 0.00 0.00 3.24
3375 4834 6.127479 CCCATCTGACTATATGCCTTAGACTC 60.127 46.154 0.00 0.00 0.00 3.36
3376 4835 5.719085 CCCATCTGACTATATGCCTTAGACT 59.281 44.000 0.00 0.00 0.00 3.24
3377 4836 5.717178 TCCCATCTGACTATATGCCTTAGAC 59.283 44.000 0.00 0.00 0.00 2.59
3378 4837 5.903923 TCCCATCTGACTATATGCCTTAGA 58.096 41.667 0.00 0.00 0.00 2.10
3379 4838 6.155910 ACATCCCATCTGACTATATGCCTTAG 59.844 42.308 0.00 0.00 0.00 2.18
3380 4839 6.025539 ACATCCCATCTGACTATATGCCTTA 58.974 40.000 0.00 0.00 0.00 2.69
3381 4840 4.848660 ACATCCCATCTGACTATATGCCTT 59.151 41.667 0.00 0.00 0.00 4.35
3382 4841 4.433255 ACATCCCATCTGACTATATGCCT 58.567 43.478 0.00 0.00 0.00 4.75
3383 4842 4.833478 ACATCCCATCTGACTATATGCC 57.167 45.455 0.00 0.00 0.00 4.40
3384 4843 5.413833 CCAAACATCCCATCTGACTATATGC 59.586 44.000 0.00 0.00 0.00 3.14
3385 4844 6.537355 ACCAAACATCCCATCTGACTATATG 58.463 40.000 0.00 0.00 0.00 1.78
3386 4845 6.770286 ACCAAACATCCCATCTGACTATAT 57.230 37.500 0.00 0.00 0.00 0.86
3387 4846 6.157820 TCAACCAAACATCCCATCTGACTATA 59.842 38.462 0.00 0.00 0.00 1.31
3388 4847 5.044919 TCAACCAAACATCCCATCTGACTAT 60.045 40.000 0.00 0.00 0.00 2.12
3389 4848 4.288366 TCAACCAAACATCCCATCTGACTA 59.712 41.667 0.00 0.00 0.00 2.59
3390 4849 3.074390 TCAACCAAACATCCCATCTGACT 59.926 43.478 0.00 0.00 0.00 3.41
3391 4850 3.420893 TCAACCAAACATCCCATCTGAC 58.579 45.455 0.00 0.00 0.00 3.51
3392 4851 3.805066 TCAACCAAACATCCCATCTGA 57.195 42.857 0.00 0.00 0.00 3.27
3393 4852 4.081406 TCTTCAACCAAACATCCCATCTG 58.919 43.478 0.00 0.00 0.00 2.90
3394 4853 4.387026 TCTTCAACCAAACATCCCATCT 57.613 40.909 0.00 0.00 0.00 2.90
3395 4854 5.467035 TTTCTTCAACCAAACATCCCATC 57.533 39.130 0.00 0.00 0.00 3.51
3396 4855 5.885449 TTTTCTTCAACCAAACATCCCAT 57.115 34.783 0.00 0.00 0.00 4.00
3397 4856 5.365025 TCATTTTCTTCAACCAAACATCCCA 59.635 36.000 0.00 0.00 0.00 4.37
3398 4857 5.852827 TCATTTTCTTCAACCAAACATCCC 58.147 37.500 0.00 0.00 0.00 3.85
3399 4858 7.495606 AGTTTCATTTTCTTCAACCAAACATCC 59.504 33.333 0.00 0.00 0.00 3.51
3400 4859 8.330302 CAGTTTCATTTTCTTCAACCAAACATC 58.670 33.333 0.00 0.00 0.00 3.06
3401 4860 7.823799 ACAGTTTCATTTTCTTCAACCAAACAT 59.176 29.630 0.00 0.00 0.00 2.71
3402 4861 7.158021 ACAGTTTCATTTTCTTCAACCAAACA 58.842 30.769 0.00 0.00 0.00 2.83
3403 4862 7.595311 ACAGTTTCATTTTCTTCAACCAAAC 57.405 32.000 0.00 0.00 0.00 2.93
3404 4863 9.145865 GTTACAGTTTCATTTTCTTCAACCAAA 57.854 29.630 0.00 0.00 0.00 3.28
3405 4864 8.527810 AGTTACAGTTTCATTTTCTTCAACCAA 58.472 29.630 0.00 0.00 0.00 3.67
3406 4865 8.062065 AGTTACAGTTTCATTTTCTTCAACCA 57.938 30.769 0.00 0.00 0.00 3.67
3407 4866 9.447040 GTAGTTACAGTTTCATTTTCTTCAACC 57.553 33.333 0.00 0.00 0.00 3.77
3418 4877 9.305555 TGTCCTAGTAAGTAGTTACAGTTTCAT 57.694 33.333 20.05 3.03 41.06 2.57
3419 4878 8.696043 TGTCCTAGTAAGTAGTTACAGTTTCA 57.304 34.615 20.05 11.46 41.06 2.69
3421 4880 9.924650 CAATGTCCTAGTAAGTAGTTACAGTTT 57.075 33.333 20.05 4.60 41.06 2.66
3422 4881 8.529476 CCAATGTCCTAGTAAGTAGTTACAGTT 58.471 37.037 20.05 4.91 41.06 3.16
3423 4882 7.892241 TCCAATGTCCTAGTAAGTAGTTACAGT 59.108 37.037 20.05 5.55 41.06 3.55
3424 4883 8.289939 TCCAATGTCCTAGTAAGTAGTTACAG 57.710 38.462 20.05 14.67 41.06 2.74
3425 4884 8.834004 ATCCAATGTCCTAGTAAGTAGTTACA 57.166 34.615 20.05 3.86 41.06 2.41
3428 4887 8.603304 ACAAATCCAATGTCCTAGTAAGTAGTT 58.397 33.333 0.00 0.00 0.00 2.24
3429 4888 8.147244 ACAAATCCAATGTCCTAGTAAGTAGT 57.853 34.615 0.00 0.00 0.00 2.73
3430 4889 9.449719 AAACAAATCCAATGTCCTAGTAAGTAG 57.550 33.333 0.00 0.00 0.00 2.57
3431 4890 9.444600 GAAACAAATCCAATGTCCTAGTAAGTA 57.555 33.333 0.00 0.00 0.00 2.24
3432 4891 8.164070 AGAAACAAATCCAATGTCCTAGTAAGT 58.836 33.333 0.00 0.00 0.00 2.24
3433 4892 8.567285 AGAAACAAATCCAATGTCCTAGTAAG 57.433 34.615 0.00 0.00 0.00 2.34
3434 4893 8.792633 CAAGAAACAAATCCAATGTCCTAGTAA 58.207 33.333 0.00 0.00 0.00 2.24
3435 4894 7.094377 GCAAGAAACAAATCCAATGTCCTAGTA 60.094 37.037 0.00 0.00 0.00 1.82
3436 4895 6.294731 GCAAGAAACAAATCCAATGTCCTAGT 60.295 38.462 0.00 0.00 0.00 2.57
3437 4896 6.095377 GCAAGAAACAAATCCAATGTCCTAG 58.905 40.000 0.00 0.00 0.00 3.02
3438 4897 5.047377 GGCAAGAAACAAATCCAATGTCCTA 60.047 40.000 0.00 0.00 0.00 2.94
3439 4898 4.262592 GGCAAGAAACAAATCCAATGTCCT 60.263 41.667 0.00 0.00 0.00 3.85
3440 4899 3.996363 GGCAAGAAACAAATCCAATGTCC 59.004 43.478 0.00 0.00 0.00 4.02
3441 4900 3.996363 GGGCAAGAAACAAATCCAATGTC 59.004 43.478 0.00 0.00 0.00 3.06
3442 4901 3.647590 AGGGCAAGAAACAAATCCAATGT 59.352 39.130 0.00 0.00 0.00 2.71
3443 4902 4.276058 AGGGCAAGAAACAAATCCAATG 57.724 40.909 0.00 0.00 0.00 2.82
3444 4903 4.837860 TGTAGGGCAAGAAACAAATCCAAT 59.162 37.500 0.00 0.00 0.00 3.16
3445 4904 4.038642 GTGTAGGGCAAGAAACAAATCCAA 59.961 41.667 0.00 0.00 0.00 3.53
3446 4905 3.572255 GTGTAGGGCAAGAAACAAATCCA 59.428 43.478 0.00 0.00 0.00 3.41
3447 4906 3.572255 TGTGTAGGGCAAGAAACAAATCC 59.428 43.478 0.00 0.00 0.00 3.01
3448 4907 4.278419 ACTGTGTAGGGCAAGAAACAAATC 59.722 41.667 0.00 0.00 0.00 2.17
3449 4908 4.215109 ACTGTGTAGGGCAAGAAACAAAT 58.785 39.130 0.00 0.00 0.00 2.32
3450 4909 3.626930 ACTGTGTAGGGCAAGAAACAAA 58.373 40.909 0.00 0.00 0.00 2.83
3451 4910 3.290948 ACTGTGTAGGGCAAGAAACAA 57.709 42.857 0.00 0.00 0.00 2.83
3452 4911 3.134985 TGTACTGTGTAGGGCAAGAAACA 59.865 43.478 0.00 0.00 0.00 2.83
3453 4912 3.735591 TGTACTGTGTAGGGCAAGAAAC 58.264 45.455 0.00 0.00 0.00 2.78
3454 4913 3.389983 ACTGTACTGTGTAGGGCAAGAAA 59.610 43.478 4.39 0.00 0.00 2.52
3455 4914 2.969950 ACTGTACTGTGTAGGGCAAGAA 59.030 45.455 4.39 0.00 0.00 2.52
3456 4915 2.605257 ACTGTACTGTGTAGGGCAAGA 58.395 47.619 4.39 0.00 0.00 3.02
3457 4916 3.402628 AACTGTACTGTGTAGGGCAAG 57.597 47.619 6.13 0.00 0.00 4.01
3458 4917 3.642377 TGTAACTGTACTGTGTAGGGCAA 59.358 43.478 6.13 0.00 0.00 4.52
3459 4918 3.232662 TGTAACTGTACTGTGTAGGGCA 58.767 45.455 6.13 0.00 0.00 5.36
3460 4919 3.368116 CCTGTAACTGTACTGTGTAGGGC 60.368 52.174 6.13 0.00 0.00 5.19
3461 4920 3.830755 ACCTGTAACTGTACTGTGTAGGG 59.169 47.826 22.60 17.15 0.00 3.53
3462 4921 5.464030 AACCTGTAACTGTACTGTGTAGG 57.536 43.478 19.67 19.67 0.00 3.18
3463 4922 6.423001 GGAAAACCTGTAACTGTACTGTGTAG 59.577 42.308 6.13 5.48 0.00 2.74
3464 4923 6.282930 GGAAAACCTGTAACTGTACTGTGTA 58.717 40.000 6.13 0.00 0.00 2.90
3465 4924 5.121105 GGAAAACCTGTAACTGTACTGTGT 58.879 41.667 6.13 0.00 0.00 3.72
3466 4925 4.210537 CGGAAAACCTGTAACTGTACTGTG 59.789 45.833 6.13 0.00 0.00 3.66
3467 4926 4.141869 ACGGAAAACCTGTAACTGTACTGT 60.142 41.667 0.00 0.00 31.20 3.55
3468 4927 4.210537 CACGGAAAACCTGTAACTGTACTG 59.789 45.833 0.00 0.00 31.91 2.74
3469 4928 4.374399 CACGGAAAACCTGTAACTGTACT 58.626 43.478 0.00 0.00 31.91 2.73
3470 4929 3.495753 CCACGGAAAACCTGTAACTGTAC 59.504 47.826 0.00 0.00 31.91 2.90
3471 4930 3.134442 ACCACGGAAAACCTGTAACTGTA 59.866 43.478 0.00 0.00 31.91 2.74
3472 4931 2.092807 ACCACGGAAAACCTGTAACTGT 60.093 45.455 0.00 0.00 31.91 3.55
3473 4932 2.567985 ACCACGGAAAACCTGTAACTG 58.432 47.619 0.00 0.00 31.91 3.16
3474 4933 3.208594 GAACCACGGAAAACCTGTAACT 58.791 45.455 0.00 0.00 31.91 2.24
3475 4934 2.291465 GGAACCACGGAAAACCTGTAAC 59.709 50.000 0.00 0.00 31.91 2.50
3476 4935 2.092538 TGGAACCACGGAAAACCTGTAA 60.093 45.455 0.00 0.00 31.91 2.41
3477 4936 1.489649 TGGAACCACGGAAAACCTGTA 59.510 47.619 0.00 0.00 31.91 2.74
3478 4937 0.256464 TGGAACCACGGAAAACCTGT 59.744 50.000 0.00 0.00 33.84 4.00
3479 4938 1.616159 ATGGAACCACGGAAAACCTG 58.384 50.000 0.00 0.00 0.00 4.00
3480 4939 2.235891 GAATGGAACCACGGAAAACCT 58.764 47.619 0.00 0.00 0.00 3.50
3481 4940 1.068816 CGAATGGAACCACGGAAAACC 60.069 52.381 0.00 0.00 0.00 3.27
3482 4941 1.605232 ACGAATGGAACCACGGAAAAC 59.395 47.619 8.31 0.00 0.00 2.43
3483 4942 1.970092 ACGAATGGAACCACGGAAAA 58.030 45.000 8.31 0.00 0.00 2.29
3484 4943 1.874872 GAACGAATGGAACCACGGAAA 59.125 47.619 8.31 0.00 0.00 3.13
3485 4944 1.515081 GAACGAATGGAACCACGGAA 58.485 50.000 8.31 0.00 0.00 4.30
3486 4945 0.320946 GGAACGAATGGAACCACGGA 60.321 55.000 8.31 0.00 0.00 4.69
3487 4946 1.303091 GGGAACGAATGGAACCACGG 61.303 60.000 8.31 0.00 0.00 4.94
3488 4947 0.321298 AGGGAACGAATGGAACCACG 60.321 55.000 0.00 0.00 0.00 4.94
3489 4948 1.165270 CAGGGAACGAATGGAACCAC 58.835 55.000 0.00 0.00 0.00 4.16
3490 4949 0.608035 GCAGGGAACGAATGGAACCA 60.608 55.000 0.00 0.00 0.00 3.67
3491 4950 0.608035 TGCAGGGAACGAATGGAACC 60.608 55.000 0.00 0.00 0.00 3.62
3492 4951 1.200020 CTTGCAGGGAACGAATGGAAC 59.800 52.381 0.00 0.00 0.00 3.62
3493 4952 1.533625 CTTGCAGGGAACGAATGGAA 58.466 50.000 0.00 0.00 0.00 3.53
3494 4953 0.960364 GCTTGCAGGGAACGAATGGA 60.960 55.000 0.00 0.00 0.00 3.41
3495 4954 1.508088 GCTTGCAGGGAACGAATGG 59.492 57.895 0.00 0.00 0.00 3.16
3496 4955 0.962356 AGGCTTGCAGGGAACGAATG 60.962 55.000 0.00 0.00 0.00 2.67
3497 4956 0.251341 AAGGCTTGCAGGGAACGAAT 60.251 50.000 0.00 0.00 0.00 3.34
3498 4957 1.150536 AAGGCTTGCAGGGAACGAA 59.849 52.632 0.00 0.00 0.00 3.85
3499 4958 1.600636 CAAGGCTTGCAGGGAACGA 60.601 57.895 15.25 0.00 0.00 3.85
3500 4959 2.629656 CCAAGGCTTGCAGGGAACG 61.630 63.158 21.77 1.59 0.00 3.95
3501 4960 2.935740 GCCAAGGCTTGCAGGGAAC 61.936 63.158 21.77 1.00 38.26 3.62
3502 4961 2.601367 GCCAAGGCTTGCAGGGAA 60.601 61.111 21.77 0.00 38.26 3.97
3512 4971 1.892474 TGTATTGTTTCCAGCCAAGGC 59.108 47.619 2.02 2.02 42.33 4.35
3513 4972 3.763360 TCATGTATTGTTTCCAGCCAAGG 59.237 43.478 0.00 0.00 0.00 3.61
3514 4973 5.587388 ATCATGTATTGTTTCCAGCCAAG 57.413 39.130 0.00 0.00 0.00 3.61
3515 4974 6.265196 GGATATCATGTATTGTTTCCAGCCAA 59.735 38.462 4.83 0.00 0.00 4.52
3516 4975 5.769662 GGATATCATGTATTGTTTCCAGCCA 59.230 40.000 4.83 0.00 0.00 4.75
3517 4976 5.106555 CGGATATCATGTATTGTTTCCAGCC 60.107 44.000 4.83 0.00 0.00 4.85
3518 4977 5.470098 ACGGATATCATGTATTGTTTCCAGC 59.530 40.000 4.83 0.00 0.00 4.85
3519 4978 6.073058 CCACGGATATCATGTATTGTTTCCAG 60.073 42.308 4.83 0.00 0.00 3.86
3520 4979 5.762711 CCACGGATATCATGTATTGTTTCCA 59.237 40.000 4.83 0.00 0.00 3.53
3521 4980 5.995282 TCCACGGATATCATGTATTGTTTCC 59.005 40.000 4.83 0.00 0.00 3.13
3522 4981 7.490962 TTCCACGGATATCATGTATTGTTTC 57.509 36.000 4.83 0.00 0.00 2.78
3523 4982 7.013274 CCTTTCCACGGATATCATGTATTGTTT 59.987 37.037 4.83 0.00 0.00 2.83
3524 4983 6.486657 CCTTTCCACGGATATCATGTATTGTT 59.513 38.462 4.83 0.00 0.00 2.83
3525 4984 5.997746 CCTTTCCACGGATATCATGTATTGT 59.002 40.000 4.83 0.00 0.00 2.71
3526 4985 6.230472 TCCTTTCCACGGATATCATGTATTG 58.770 40.000 4.83 0.00 0.00 1.90
3527 4986 6.433847 TCCTTTCCACGGATATCATGTATT 57.566 37.500 4.83 0.00 0.00 1.89
3528 4987 6.352222 GGATCCTTTCCACGGATATCATGTAT 60.352 42.308 3.84 0.00 44.74 2.29
3529 4988 5.046591 GGATCCTTTCCACGGATATCATGTA 60.047 44.000 3.84 0.00 44.74 2.29
3530 4989 4.263068 GGATCCTTTCCACGGATATCATGT 60.263 45.833 3.84 0.00 44.74 3.21
3531 4990 4.256920 GGATCCTTTCCACGGATATCATG 58.743 47.826 3.84 2.23 44.74 3.07
3532 4991 4.559862 GGATCCTTTCCACGGATATCAT 57.440 45.455 3.84 0.00 44.74 2.45
3543 5002 3.244561 TGTCTTGTCTGTGGATCCTTTCC 60.245 47.826 14.23 0.00 45.69 3.13
3544 5003 3.748568 GTGTCTTGTCTGTGGATCCTTTC 59.251 47.826 14.23 4.34 0.00 2.62
3545 5004 3.496870 GGTGTCTTGTCTGTGGATCCTTT 60.497 47.826 14.23 0.00 0.00 3.11
3546 5005 2.039084 GGTGTCTTGTCTGTGGATCCTT 59.961 50.000 14.23 0.00 0.00 3.36
3547 5006 1.625818 GGTGTCTTGTCTGTGGATCCT 59.374 52.381 14.23 0.00 0.00 3.24
3548 5007 1.347707 TGGTGTCTTGTCTGTGGATCC 59.652 52.381 4.20 4.20 0.00 3.36
3549 5008 2.839486 TGGTGTCTTGTCTGTGGATC 57.161 50.000 0.00 0.00 0.00 3.36
3550 5009 2.811873 GCTTGGTGTCTTGTCTGTGGAT 60.812 50.000 0.00 0.00 0.00 3.41
3551 5010 1.475034 GCTTGGTGTCTTGTCTGTGGA 60.475 52.381 0.00 0.00 0.00 4.02
3552 5011 0.947244 GCTTGGTGTCTTGTCTGTGG 59.053 55.000 0.00 0.00 0.00 4.17
3553 5012 1.600957 CTGCTTGGTGTCTTGTCTGTG 59.399 52.381 0.00 0.00 0.00 3.66
3554 5013 1.959042 CTGCTTGGTGTCTTGTCTGT 58.041 50.000 0.00 0.00 0.00 3.41
3555 5014 0.590195 GCTGCTTGGTGTCTTGTCTG 59.410 55.000 0.00 0.00 0.00 3.51
3556 5015 0.181114 TGCTGCTTGGTGTCTTGTCT 59.819 50.000 0.00 0.00 0.00 3.41
3557 5016 1.024271 TTGCTGCTTGGTGTCTTGTC 58.976 50.000 0.00 0.00 0.00 3.18
3558 5017 1.134946 GTTTGCTGCTTGGTGTCTTGT 59.865 47.619 0.00 0.00 0.00 3.16
3559 5018 1.134753 TGTTTGCTGCTTGGTGTCTTG 59.865 47.619 0.00 0.00 0.00 3.02
3560 5019 1.134946 GTGTTTGCTGCTTGGTGTCTT 59.865 47.619 0.00 0.00 0.00 3.01
3561 5020 0.740737 GTGTTTGCTGCTTGGTGTCT 59.259 50.000 0.00 0.00 0.00 3.41
3562 5021 0.740737 AGTGTTTGCTGCTTGGTGTC 59.259 50.000 0.00 0.00 0.00 3.67
3563 5022 0.457035 CAGTGTTTGCTGCTTGGTGT 59.543 50.000 0.00 0.00 0.00 4.16
3564 5023 3.261441 CAGTGTTTGCTGCTTGGTG 57.739 52.632 0.00 0.00 0.00 4.17
3582 5041 4.114794 ACATTTTGAGTTCTTGCACTTGC 58.885 39.130 0.00 0.00 42.50 4.01
3583 5042 5.457799 CAGACATTTTGAGTTCTTGCACTTG 59.542 40.000 0.00 0.00 0.00 3.16
3584 5043 5.357878 TCAGACATTTTGAGTTCTTGCACTT 59.642 36.000 0.00 0.00 0.00 3.16
3585 5044 4.883585 TCAGACATTTTGAGTTCTTGCACT 59.116 37.500 0.00 0.00 0.00 4.40
3586 5045 5.173774 TCAGACATTTTGAGTTCTTGCAC 57.826 39.130 0.00 0.00 0.00 4.57
3654 5113 7.715657 AGACAAATTCAGTAGCAACAAAATCA 58.284 30.769 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.