Multiple sequence alignment - TraesCS2B01G374800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G374800 chr2B 100.000 6073 0 0 1 6073 534848678 534842606 0.000000e+00 11215.0
1 TraesCS2B01G374800 chr2B 95.192 104 2 2 4318 4419 151658623 151658521 1.750000e-35 161.0
2 TraesCS2B01G374800 chr2B 91.304 115 8 1 4315 4427 664215159 664215273 8.150000e-34 156.0
3 TraesCS2B01G374800 chr2D 97.205 1932 45 7 1239 3165 455337629 455335702 0.000000e+00 3260.0
4 TraesCS2B01G374800 chr2D 97.044 1184 23 6 3151 4326 455335658 455334479 0.000000e+00 1982.0
5 TraesCS2B01G374800 chr2D 97.002 934 16 3 201 1130 455338553 455337628 0.000000e+00 1559.0
6 TraesCS2B01G374800 chr2D 94.764 974 23 9 4418 5375 455334480 455333519 0.000000e+00 1491.0
7 TraesCS2B01G374800 chr2D 94.290 613 25 8 5463 6073 455307387 455306783 0.000000e+00 929.0
8 TraesCS2B01G374800 chr2D 94.258 209 8 3 2 208 300761037 300761243 3.530000e-82 316.0
9 TraesCS2B01G374800 chr2D 94.231 208 9 2 2 208 279465202 279464997 1.270000e-81 315.0
10 TraesCS2B01G374800 chr2D 90.909 110 9 1 1140 1249 206682654 206682762 4.910000e-31 147.0
11 TraesCS2B01G374800 chr2D 91.429 105 7 2 1144 1248 404040087 404039985 6.350000e-30 143.0
12 TraesCS2B01G374800 chr6D 92.205 1193 60 21 3148 4326 426064253 426065426 0.000000e+00 1657.0
13 TraesCS2B01G374800 chr6D 87.903 1397 114 27 1772 3140 426062831 426064200 0.000000e+00 1592.0
14 TraesCS2B01G374800 chr6D 90.236 973 51 12 4437 5392 426065462 426066407 0.000000e+00 1230.0
15 TraesCS2B01G374800 chr6D 88.559 944 64 19 201 1130 426061404 426062317 0.000000e+00 1105.0
16 TraesCS2B01G374800 chr6D 88.846 520 30 15 1242 1738 426062316 426062830 1.120000e-171 614.0
17 TraesCS2B01G374800 chr6D 90.526 475 26 12 3148 3615 20388384 20388846 1.450000e-170 610.0
18 TraesCS2B01G374800 chr6D 89.278 457 26 13 5625 6073 426115012 426115453 8.900000e-153 551.0
19 TraesCS2B01G374800 chr6D 97.826 46 1 0 5400 5445 426113820 426113865 5.050000e-11 80.5
20 TraesCS2B01G374800 chr6A 91.899 1185 62 22 3148 4318 570927185 570928349 0.000000e+00 1626.0
21 TraesCS2B01G374800 chr6A 88.100 1395 110 29 1772 3140 570925768 570927132 0.000000e+00 1605.0
22 TraesCS2B01G374800 chr6A 91.129 992 55 11 4415 5392 570928350 570929322 0.000000e+00 1314.0
23 TraesCS2B01G374800 chr6A 88.017 943 69 19 201 1130 570924345 570925256 0.000000e+00 1075.0
24 TraesCS2B01G374800 chr6A 88.846 520 28 16 1242 1738 570925255 570925767 4.020000e-171 612.0
25 TraesCS2B01G374800 chr6A 89.344 488 34 13 5595 6073 571029999 571030477 1.130000e-166 597.0
26 TraesCS2B01G374800 chr6B 87.500 1224 98 28 1939 3140 641289015 641290205 0.000000e+00 1362.0
27 TraesCS2B01G374800 chr6B 90.462 996 53 13 4418 5392 641291376 641292350 0.000000e+00 1275.0
28 TraesCS2B01G374800 chr6B 87.949 946 65 21 201 1130 641286812 641287724 0.000000e+00 1070.0
29 TraesCS2B01G374800 chr6B 92.619 691 32 14 3148 3831 641290258 641290936 0.000000e+00 976.0
30 TraesCS2B01G374800 chr6B 89.212 723 42 20 1242 1939 641287723 641288434 0.000000e+00 870.0
31 TraesCS2B01G374800 chr6B 91.106 461 31 9 5617 6073 641409039 641409493 3.110000e-172 616.0
32 TraesCS2B01G374800 chr6B 91.572 439 26 5 3870 4306 641290939 641291368 4.050000e-166 595.0
33 TraesCS2B01G374800 chr5B 89.796 392 27 12 5688 6073 112264329 112264713 1.970000e-134 490.0
34 TraesCS2B01G374800 chr5B 85.185 243 34 2 5832 6073 660370467 660370226 1.310000e-61 248.0
35 TraesCS2B01G374800 chr5B 92.241 116 9 0 522 637 386643122 386643237 1.350000e-36 165.0
36 TraesCS2B01G374800 chr5D 87.468 391 40 8 5687 6073 103213250 103213635 5.590000e-120 442.0
37 TraesCS2B01G374800 chr5D 95.146 206 8 2 4 208 450488856 450489060 2.110000e-84 324.0
38 TraesCS2B01G374800 chr5D 94.660 206 8 2 4 208 97319005 97319208 3.530000e-82 316.0
39 TraesCS2B01G374800 chr5D 94.660 206 8 2 4 208 346401112 346401315 3.530000e-82 316.0
40 TraesCS2B01G374800 chr5D 86.420 243 31 2 5832 6073 525788300 525788059 1.300000e-66 265.0
41 TraesCS2B01G374800 chr5D 93.137 102 5 2 1144 1244 180472062 180472162 1.360000e-31 148.0
42 TraesCS2B01G374800 chr5A 87.374 396 37 9 5688 6073 95569162 95568770 5.590000e-120 442.0
43 TraesCS2B01G374800 chr7D 94.660 206 9 2 4 208 195975349 195975145 9.820000e-83 318.0
44 TraesCS2B01G374800 chr7D 94.393 107 3 2 4319 4422 561963324 561963430 1.750000e-35 161.0
45 TraesCS2B01G374800 chr4D 94.660 206 9 2 4 208 18890497 18890701 9.820000e-83 318.0
46 TraesCS2B01G374800 chr3D 94.660 206 9 2 4 208 168599949 168599745 9.820000e-83 318.0
47 TraesCS2B01G374800 chr3D 92.105 114 7 1 4315 4426 293614353 293614240 6.300000e-35 159.0
48 TraesCS2B01G374800 chr3D 87.121 132 11 4 4325 4451 401897783 401897653 1.760000e-30 145.0
49 TraesCS2B01G374800 chr7B 93.780 209 10 2 1 208 627463105 627463311 1.640000e-80 311.0
50 TraesCS2B01G374800 chr7B 92.105 114 6 2 4321 4431 5263734 5263847 2.270000e-34 158.0
51 TraesCS2B01G374800 chr7B 90.244 123 6 5 4315 4434 458786192 458786311 8.150000e-34 156.0
52 TraesCS2B01G374800 chr1B 92.727 110 6 1 4321 4428 259511941 259511832 2.270000e-34 158.0
53 TraesCS2B01G374800 chr1B 93.458 107 5 1 4321 4425 536657403 536657509 2.270000e-34 158.0
54 TraesCS2B01G374800 chr1A 92.233 103 8 0 1144 1246 324495828 324495726 4.910000e-31 147.0
55 TraesCS2B01G374800 chr1A 92.157 102 6 2 1144 1244 104004943 104004843 6.350000e-30 143.0
56 TraesCS2B01G374800 chr2A 92.929 99 7 0 1143 1241 502868969 502869067 1.760000e-30 145.0
57 TraesCS2B01G374800 chr2A 91.429 105 7 2 1144 1248 542385104 542385002 6.350000e-30 143.0
58 TraesCS2B01G374800 chr7A 92.079 101 8 0 1143 1243 164447344 164447444 6.350000e-30 143.0
59 TraesCS2B01G374800 chr4B 90.476 105 10 0 1142 1246 577032982 577032878 8.210000e-29 139.0
60 TraesCS2B01G374800 chr4B 84.559 136 14 4 503 637 242749404 242749275 1.780000e-25 128.0
61 TraesCS2B01G374800 chr4A 84.672 137 13 5 501 637 362113108 362112980 4.940000e-26 130.0
62 TraesCS2B01G374800 chr1D 87.356 87 11 0 522 608 468100395 468100481 3.870000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G374800 chr2B 534842606 534848678 6072 True 11215.000000 11215 100.000000 1 6073 1 chr2B.!!$R2 6072
1 TraesCS2B01G374800 chr2D 455333519 455338553 5034 True 2073.000000 3260 96.503750 201 5375 4 chr2D.!!$R4 5174
2 TraesCS2B01G374800 chr2D 455306783 455307387 604 True 929.000000 929 94.290000 5463 6073 1 chr2D.!!$R3 610
3 TraesCS2B01G374800 chr6D 426061404 426066407 5003 False 1239.600000 1657 89.549800 201 5392 5 chr6D.!!$F2 5191
4 TraesCS2B01G374800 chr6D 426113820 426115453 1633 False 315.750000 551 93.552000 5400 6073 2 chr6D.!!$F3 673
5 TraesCS2B01G374800 chr6A 570924345 570929322 4977 False 1246.400000 1626 89.598200 201 5392 5 chr6A.!!$F2 5191
6 TraesCS2B01G374800 chr6B 641286812 641292350 5538 False 1024.666667 1362 89.885667 201 5392 6 chr6B.!!$F2 5191

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
179 180 0.036732 CAAGCCTCTGTAGCCACCAA 59.963 55.000 0.00 0.0 0.00 3.67 F
192 193 0.320050 CCACCAAAAACCAATCGGGG 59.680 55.000 0.00 0.0 42.91 5.73 F
193 194 0.320334 CACCAAAAACCAATCGGGGC 60.320 55.000 0.00 0.0 42.91 5.80 F
196 197 1.157513 AAAAACCAATCGGGGCCCT 59.842 52.632 24.38 0.0 42.91 5.19 F
197 198 1.191489 AAAAACCAATCGGGGCCCTG 61.191 55.000 26.30 26.3 42.91 4.45 F
1394 1546 1.228644 AAGCCAGCCAAGTCATGCA 60.229 52.632 0.00 0.0 0.00 3.96 F
2334 3069 0.035881 CTTGTGCAGGAAGAGCCTCA 59.964 55.000 0.00 0.0 46.97 3.86 F
4057 4907 0.472734 ATTCCTAGAGGCCGCCATCT 60.473 55.000 13.15 13.5 34.44 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1222 1353 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.0 0.00 3.28 R
1223 1354 1.002069 TACTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.0 0.00 4.12 R
1224 1355 1.229131 ATACTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.0 0.00 4.37 R
1839 1992 2.419324 CTCTTAGTGAGACGCGGTAACT 59.581 50.000 12.47 8.6 45.39 2.24 R
1851 2004 4.011966 TCACGGTGTAGACTCTTAGTGA 57.988 45.455 8.17 0.0 35.38 3.41 R
3059 3835 2.039084 GGAGGAACTGGAAAAGAGAGCA 59.961 50.000 0.00 0.0 41.55 4.26 R
4322 5173 0.115745 TTTGGGACGGAGGGAGTAGT 59.884 55.000 0.00 0.0 0.00 2.73 R
5657 7623 0.109643 TTATGGGTCACGTCACGTCG 60.110 55.000 0.00 0.0 38.32 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 4.660938 GCACACACCCCCACCCTC 62.661 72.222 0.00 0.00 0.00 4.30
60 61 3.174987 CACACACCCCCACCCTCA 61.175 66.667 0.00 0.00 0.00 3.86
61 62 2.121506 ACACACCCCCACCCTCAT 60.122 61.111 0.00 0.00 0.00 2.90
62 63 2.356278 CACACCCCCACCCTCATG 59.644 66.667 0.00 0.00 0.00 3.07
63 64 2.941025 ACACCCCCACCCTCATGG 60.941 66.667 0.00 0.00 39.71 3.66
73 74 4.181010 CCTCATGGGCCCCTCGTG 62.181 72.222 22.27 13.21 0.00 4.35
74 75 4.181010 CTCATGGGCCCCTCGTGG 62.181 72.222 22.27 1.87 0.00 4.94
84 85 3.775654 CCTCGTGGCTCCCCTGAC 61.776 72.222 0.00 0.00 0.00 3.51
85 86 3.775654 CTCGTGGCTCCCCTGACC 61.776 72.222 0.00 0.00 0.00 4.02
88 89 4.083862 GTGGCTCCCCTGACCGAC 62.084 72.222 0.00 0.00 0.00 4.79
89 90 4.316823 TGGCTCCCCTGACCGACT 62.317 66.667 0.00 0.00 0.00 4.18
90 91 3.003763 GGCTCCCCTGACCGACTT 61.004 66.667 0.00 0.00 0.00 3.01
91 92 1.684734 GGCTCCCCTGACCGACTTA 60.685 63.158 0.00 0.00 0.00 2.24
92 93 1.049289 GGCTCCCCTGACCGACTTAT 61.049 60.000 0.00 0.00 0.00 1.73
93 94 0.831307 GCTCCCCTGACCGACTTATT 59.169 55.000 0.00 0.00 0.00 1.40
94 95 1.209747 GCTCCCCTGACCGACTTATTT 59.790 52.381 0.00 0.00 0.00 1.40
95 96 2.742204 GCTCCCCTGACCGACTTATTTC 60.742 54.545 0.00 0.00 0.00 2.17
96 97 1.479323 TCCCCTGACCGACTTATTTCG 59.521 52.381 0.00 0.00 38.80 3.46
97 98 1.287425 CCCTGACCGACTTATTTCGC 58.713 55.000 0.00 0.00 37.70 4.70
98 99 1.287425 CCTGACCGACTTATTTCGCC 58.713 55.000 0.00 0.00 37.70 5.54
99 100 1.134788 CCTGACCGACTTATTTCGCCT 60.135 52.381 0.00 0.00 37.70 5.52
100 101 2.100252 CCTGACCGACTTATTTCGCCTA 59.900 50.000 0.00 0.00 37.70 3.93
101 102 3.243771 CCTGACCGACTTATTTCGCCTAT 60.244 47.826 0.00 0.00 37.70 2.57
102 103 4.022589 CCTGACCGACTTATTTCGCCTATA 60.023 45.833 0.00 0.00 37.70 1.31
103 104 5.336531 CCTGACCGACTTATTTCGCCTATAT 60.337 44.000 0.00 0.00 37.70 0.86
104 105 6.127814 CCTGACCGACTTATTTCGCCTATATA 60.128 42.308 0.00 0.00 37.70 0.86
105 106 7.400599 TGACCGACTTATTTCGCCTATATAT 57.599 36.000 0.00 0.00 37.70 0.86
106 107 7.255569 TGACCGACTTATTTCGCCTATATATG 58.744 38.462 0.00 0.00 37.70 1.78
107 108 7.094075 TGACCGACTTATTTCGCCTATATATGT 60.094 37.037 0.00 0.00 37.70 2.29
108 109 7.256286 ACCGACTTATTTCGCCTATATATGTC 58.744 38.462 0.00 0.00 37.70 3.06
109 110 6.696148 CCGACTTATTTCGCCTATATATGTCC 59.304 42.308 0.00 0.00 37.70 4.02
110 111 7.255569 CGACTTATTTCGCCTATATATGTCCA 58.744 38.462 0.00 0.00 30.87 4.02
111 112 7.921214 CGACTTATTTCGCCTATATATGTCCAT 59.079 37.037 0.00 0.00 30.87 3.41
117 118 7.534723 TTCGCCTATATATGTCCATATACCC 57.465 40.000 8.74 0.00 38.61 3.69
118 119 6.860034 TCGCCTATATATGTCCATATACCCT 58.140 40.000 8.74 0.00 38.61 4.34
119 120 7.992295 TCGCCTATATATGTCCATATACCCTA 58.008 38.462 8.74 0.00 38.61 3.53
120 121 8.450434 TCGCCTATATATGTCCATATACCCTAA 58.550 37.037 8.74 0.00 38.61 2.69
121 122 9.085645 CGCCTATATATGTCCATATACCCTAAA 57.914 37.037 8.74 0.00 38.61 1.85
128 129 7.979444 ATGTCCATATACCCTAAAAACATCG 57.021 36.000 0.00 0.00 0.00 3.84
129 130 6.292923 TGTCCATATACCCTAAAAACATCGG 58.707 40.000 0.00 0.00 0.00 4.18
130 131 5.704053 GTCCATATACCCTAAAAACATCGGG 59.296 44.000 0.00 0.00 42.53 5.14
131 132 5.007682 CCATATACCCTAAAAACATCGGGG 58.992 45.833 0.00 0.00 41.11 5.73
132 133 3.588210 ATACCCTAAAAACATCGGGGG 57.412 47.619 0.00 0.00 41.11 5.40
133 134 0.323999 ACCCTAAAAACATCGGGGGC 60.324 55.000 0.00 0.00 41.11 5.80
134 135 0.323908 CCCTAAAAACATCGGGGGCA 60.324 55.000 0.00 0.00 33.84 5.36
135 136 0.815095 CCTAAAAACATCGGGGGCAC 59.185 55.000 0.00 0.00 0.00 5.01
136 137 1.540267 CTAAAAACATCGGGGGCACA 58.460 50.000 0.00 0.00 0.00 4.57
137 138 1.889829 CTAAAAACATCGGGGGCACAA 59.110 47.619 0.00 0.00 0.00 3.33
138 139 1.347062 AAAAACATCGGGGGCACAAT 58.653 45.000 0.00 0.00 0.00 2.71
139 140 2.223803 AAAACATCGGGGGCACAATA 57.776 45.000 0.00 0.00 0.00 1.90
140 141 1.762708 AAACATCGGGGGCACAATAG 58.237 50.000 0.00 0.00 0.00 1.73
141 142 0.916086 AACATCGGGGGCACAATAGA 59.084 50.000 0.00 0.00 0.00 1.98
142 143 1.140312 ACATCGGGGGCACAATAGAT 58.860 50.000 0.00 0.00 0.00 1.98
143 144 1.072331 ACATCGGGGGCACAATAGATC 59.928 52.381 0.00 0.00 0.00 2.75
144 145 1.072173 CATCGGGGGCACAATAGATCA 59.928 52.381 0.00 0.00 0.00 2.92
145 146 0.758734 TCGGGGGCACAATAGATCAG 59.241 55.000 0.00 0.00 0.00 2.90
146 147 0.250467 CGGGGGCACAATAGATCAGG 60.250 60.000 0.00 0.00 0.00 3.86
147 148 1.140312 GGGGGCACAATAGATCAGGA 58.860 55.000 0.00 0.00 0.00 3.86
148 149 1.072965 GGGGGCACAATAGATCAGGAG 59.927 57.143 0.00 0.00 0.00 3.69
149 150 1.771255 GGGGCACAATAGATCAGGAGT 59.229 52.381 0.00 0.00 0.00 3.85
150 151 2.173569 GGGGCACAATAGATCAGGAGTT 59.826 50.000 0.00 0.00 0.00 3.01
151 152 3.471680 GGGCACAATAGATCAGGAGTTC 58.528 50.000 0.00 0.00 0.00 3.01
152 153 3.471680 GGCACAATAGATCAGGAGTTCC 58.528 50.000 0.00 0.00 0.00 3.62
153 154 3.126831 GCACAATAGATCAGGAGTTCCG 58.873 50.000 0.00 0.00 42.08 4.30
154 155 3.126831 CACAATAGATCAGGAGTTCCGC 58.873 50.000 0.00 0.00 42.08 5.54
155 156 2.103263 ACAATAGATCAGGAGTTCCGCC 59.897 50.000 0.00 0.00 42.08 6.13
156 157 0.962489 ATAGATCAGGAGTTCCGCCG 59.038 55.000 0.00 0.00 42.08 6.46
157 158 1.735376 TAGATCAGGAGTTCCGCCGC 61.735 60.000 0.00 0.00 42.08 6.53
158 159 4.162690 ATCAGGAGTTCCGCCGCC 62.163 66.667 0.00 0.00 42.08 6.13
163 164 3.423154 GAGTTCCGCCGCCACAAG 61.423 66.667 0.00 0.00 0.00 3.16
171 172 2.662596 CCGCCACAAGCCTCTGTA 59.337 61.111 0.00 0.00 38.78 2.74
172 173 1.448540 CCGCCACAAGCCTCTGTAG 60.449 63.158 0.00 0.00 38.78 2.74
173 174 2.103042 CGCCACAAGCCTCTGTAGC 61.103 63.158 0.00 0.00 38.78 3.58
174 175 1.746991 GCCACAAGCCTCTGTAGCC 60.747 63.158 0.00 0.00 34.35 3.93
175 176 1.679311 CCACAAGCCTCTGTAGCCA 59.321 57.895 0.00 0.00 0.00 4.75
176 177 0.674895 CCACAAGCCTCTGTAGCCAC 60.675 60.000 0.00 0.00 0.00 5.01
177 178 0.674895 CACAAGCCTCTGTAGCCACC 60.675 60.000 0.00 0.00 0.00 4.61
178 179 1.127567 ACAAGCCTCTGTAGCCACCA 61.128 55.000 0.00 0.00 0.00 4.17
179 180 0.036732 CAAGCCTCTGTAGCCACCAA 59.963 55.000 0.00 0.00 0.00 3.67
180 181 0.771127 AAGCCTCTGTAGCCACCAAA 59.229 50.000 0.00 0.00 0.00 3.28
181 182 0.771127 AGCCTCTGTAGCCACCAAAA 59.229 50.000 0.00 0.00 0.00 2.44
182 183 1.144913 AGCCTCTGTAGCCACCAAAAA 59.855 47.619 0.00 0.00 0.00 1.94
183 184 1.269723 GCCTCTGTAGCCACCAAAAAC 59.730 52.381 0.00 0.00 0.00 2.43
184 185 1.886542 CCTCTGTAGCCACCAAAAACC 59.113 52.381 0.00 0.00 0.00 3.27
185 186 2.582052 CTCTGTAGCCACCAAAAACCA 58.418 47.619 0.00 0.00 0.00 3.67
186 187 2.955660 CTCTGTAGCCACCAAAAACCAA 59.044 45.455 0.00 0.00 0.00 3.67
187 188 3.571590 TCTGTAGCCACCAAAAACCAAT 58.428 40.909 0.00 0.00 0.00 3.16
188 189 3.572255 TCTGTAGCCACCAAAAACCAATC 59.428 43.478 0.00 0.00 0.00 2.67
189 190 2.294791 TGTAGCCACCAAAAACCAATCG 59.705 45.455 0.00 0.00 0.00 3.34
190 191 0.678950 AGCCACCAAAAACCAATCGG 59.321 50.000 0.00 0.00 38.77 4.18
191 192 0.320334 GCCACCAAAAACCAATCGGG 60.320 55.000 0.00 0.00 44.81 5.14
192 193 0.320050 CCACCAAAAACCAATCGGGG 59.680 55.000 0.00 0.00 42.91 5.73
193 194 0.320334 CACCAAAAACCAATCGGGGC 60.320 55.000 0.00 0.00 42.91 5.80
194 195 1.295101 CCAAAAACCAATCGGGGCC 59.705 57.895 0.00 0.00 42.91 5.80
195 196 1.295101 CAAAAACCAATCGGGGCCC 59.705 57.895 15.76 15.76 42.91 5.80
196 197 1.157513 AAAAACCAATCGGGGCCCT 59.842 52.632 24.38 0.00 42.91 5.19
197 198 1.191489 AAAAACCAATCGGGGCCCTG 61.191 55.000 26.30 26.30 42.91 4.45
198 199 2.380571 AAAACCAATCGGGGCCCTGT 62.381 55.000 30.31 14.94 42.91 4.00
199 200 2.380571 AAACCAATCGGGGCCCTGTT 62.381 55.000 30.31 19.95 42.91 3.16
200 201 2.440247 CCAATCGGGGCCCTGTTC 60.440 66.667 30.31 8.23 0.00 3.18
201 202 2.440247 CAATCGGGGCCCTGTTCC 60.440 66.667 30.31 7.80 0.00 3.62
202 203 4.109675 AATCGGGGCCCTGTTCCG 62.110 66.667 30.31 20.33 44.59 4.30
303 304 2.859165 ACATATCAAGGGTATGCCGG 57.141 50.000 0.00 0.00 33.79 6.13
329 330 8.694394 GTGTTTATGATTTCTTGCACTTCTTTC 58.306 33.333 0.00 0.00 0.00 2.62
518 530 1.333619 GACTGTGTTTGACATTGCGGT 59.666 47.619 0.00 0.00 32.74 5.68
618 630 1.737793 CGTGACTATTTTCCCACAGCC 59.262 52.381 0.00 0.00 0.00 4.85
700 715 3.542969 ACCCCAAACTGAGCCTAAATT 57.457 42.857 0.00 0.00 0.00 1.82
791 810 6.483307 TGATCCTTTATGACAGCTTTTATCCG 59.517 38.462 0.00 0.00 0.00 4.18
950 971 2.671130 AGCCCGCCAATATTTTTGTG 57.329 45.000 0.00 0.00 0.00 3.33
1133 1264 9.547753 TTCATTGTTCTGCTAAGAATATACTCC 57.452 33.333 0.00 0.00 44.18 3.85
1134 1265 8.150945 TCATTGTTCTGCTAAGAATATACTCCC 58.849 37.037 0.00 0.00 44.18 4.30
1135 1266 7.676683 TTGTTCTGCTAAGAATATACTCCCT 57.323 36.000 0.00 0.00 44.18 4.20
1136 1267 7.676683 TGTTCTGCTAAGAATATACTCCCTT 57.323 36.000 0.00 0.00 44.18 3.95
1137 1268 7.727181 TGTTCTGCTAAGAATATACTCCCTTC 58.273 38.462 0.00 0.00 44.18 3.46
1138 1269 7.344612 TGTTCTGCTAAGAATATACTCCCTTCA 59.655 37.037 0.00 0.00 44.18 3.02
1139 1270 8.371699 GTTCTGCTAAGAATATACTCCCTTCAT 58.628 37.037 0.00 0.00 44.18 2.57
1140 1271 8.128322 TCTGCTAAGAATATACTCCCTTCATC 57.872 38.462 0.00 0.00 0.00 2.92
1141 1272 7.179338 TCTGCTAAGAATATACTCCCTTCATCC 59.821 40.741 0.00 0.00 0.00 3.51
1142 1273 6.787458 TGCTAAGAATATACTCCCTTCATCCA 59.213 38.462 0.00 0.00 0.00 3.41
1143 1274 7.459125 TGCTAAGAATATACTCCCTTCATCCAT 59.541 37.037 0.00 0.00 0.00 3.41
1144 1275 8.982723 GCTAAGAATATACTCCCTTCATCCATA 58.017 37.037 0.00 0.00 0.00 2.74
1146 1277 8.980832 AAGAATATACTCCCTTCATCCATACT 57.019 34.615 0.00 0.00 0.00 2.12
1147 1278 8.602472 AGAATATACTCCCTTCATCCATACTC 57.398 38.462 0.00 0.00 0.00 2.59
1148 1279 7.621683 AGAATATACTCCCTTCATCCATACTCC 59.378 40.741 0.00 0.00 0.00 3.85
1149 1280 2.695585 ACTCCCTTCATCCATACTCCC 58.304 52.381 0.00 0.00 0.00 4.30
1150 1281 2.251338 ACTCCCTTCATCCATACTCCCT 59.749 50.000 0.00 0.00 0.00 4.20
1151 1282 3.311702 ACTCCCTTCATCCATACTCCCTT 60.312 47.826 0.00 0.00 0.00 3.95
1152 1283 3.318313 TCCCTTCATCCATACTCCCTTC 58.682 50.000 0.00 0.00 0.00 3.46
1153 1284 3.048600 CCCTTCATCCATACTCCCTTCA 58.951 50.000 0.00 0.00 0.00 3.02
1154 1285 3.654806 CCCTTCATCCATACTCCCTTCAT 59.345 47.826 0.00 0.00 0.00 2.57
1155 1286 4.263243 CCCTTCATCCATACTCCCTTCATC 60.263 50.000 0.00 0.00 0.00 2.92
1156 1287 4.263243 CCTTCATCCATACTCCCTTCATCC 60.263 50.000 0.00 0.00 0.00 3.51
1157 1288 3.251484 TCATCCATACTCCCTTCATCCC 58.749 50.000 0.00 0.00 0.00 3.85
1158 1289 2.887454 TCCATACTCCCTTCATCCCA 57.113 50.000 0.00 0.00 0.00 4.37
1159 1290 3.144068 TCCATACTCCCTTCATCCCAA 57.856 47.619 0.00 0.00 0.00 4.12
1160 1291 3.469859 TCCATACTCCCTTCATCCCAAA 58.530 45.455 0.00 0.00 0.00 3.28
1161 1292 3.855599 TCCATACTCCCTTCATCCCAAAA 59.144 43.478 0.00 0.00 0.00 2.44
1162 1293 4.482025 TCCATACTCCCTTCATCCCAAAAT 59.518 41.667 0.00 0.00 0.00 1.82
1163 1294 5.043432 TCCATACTCCCTTCATCCCAAAATT 60.043 40.000 0.00 0.00 0.00 1.82
1164 1295 6.161348 TCCATACTCCCTTCATCCCAAAATTA 59.839 38.462 0.00 0.00 0.00 1.40
1165 1296 6.491403 CCATACTCCCTTCATCCCAAAATTAG 59.509 42.308 0.00 0.00 0.00 1.73
1166 1297 5.536497 ACTCCCTTCATCCCAAAATTAGT 57.464 39.130 0.00 0.00 0.00 2.24
1167 1298 5.264395 ACTCCCTTCATCCCAAAATTAGTG 58.736 41.667 0.00 0.00 0.00 2.74
1168 1299 5.015178 ACTCCCTTCATCCCAAAATTAGTGA 59.985 40.000 0.00 0.00 0.00 3.41
1169 1300 5.261216 TCCCTTCATCCCAAAATTAGTGAC 58.739 41.667 0.00 0.00 0.00 3.67
1170 1301 5.015178 TCCCTTCATCCCAAAATTAGTGACT 59.985 40.000 0.00 0.00 0.00 3.41
1171 1302 5.358160 CCCTTCATCCCAAAATTAGTGACTC 59.642 44.000 0.00 0.00 0.00 3.36
1172 1303 5.945784 CCTTCATCCCAAAATTAGTGACTCA 59.054 40.000 0.00 0.00 0.00 3.41
1173 1304 6.434028 CCTTCATCCCAAAATTAGTGACTCAA 59.566 38.462 0.00 0.00 0.00 3.02
1174 1305 6.817765 TCATCCCAAAATTAGTGACTCAAC 57.182 37.500 0.00 0.00 0.00 3.18
1175 1306 6.542821 TCATCCCAAAATTAGTGACTCAACT 58.457 36.000 0.00 0.00 0.00 3.16
1176 1307 7.004086 TCATCCCAAAATTAGTGACTCAACTT 58.996 34.615 0.00 0.00 0.00 2.66
1177 1308 6.877611 TCCCAAAATTAGTGACTCAACTTC 57.122 37.500 0.00 0.00 0.00 3.01
1178 1309 6.601332 TCCCAAAATTAGTGACTCAACTTCT 58.399 36.000 0.00 0.00 0.00 2.85
1179 1310 7.060421 TCCCAAAATTAGTGACTCAACTTCTT 58.940 34.615 0.00 0.00 0.00 2.52
1180 1311 8.215050 TCCCAAAATTAGTGACTCAACTTCTTA 58.785 33.333 0.00 0.00 0.00 2.10
1181 1312 8.290325 CCCAAAATTAGTGACTCAACTTCTTAC 58.710 37.037 0.00 0.00 0.00 2.34
1182 1313 9.057089 CCAAAATTAGTGACTCAACTTCTTACT 57.943 33.333 0.00 0.00 0.00 2.24
1189 1320 8.649973 AGTGACTCAACTTCTTACTAACTTTG 57.350 34.615 0.00 0.00 0.00 2.77
1190 1321 8.258708 AGTGACTCAACTTCTTACTAACTTTGT 58.741 33.333 0.00 0.00 0.00 2.83
1191 1322 9.525409 GTGACTCAACTTCTTACTAACTTTGTA 57.475 33.333 0.00 0.00 0.00 2.41
1192 1323 9.525409 TGACTCAACTTCTTACTAACTTTGTAC 57.475 33.333 0.00 0.00 0.00 2.90
1193 1324 9.747293 GACTCAACTTCTTACTAACTTTGTACT 57.253 33.333 0.00 0.00 0.00 2.73
1228 1359 8.934023 ATAAACTTGAGTCACTTATTTTGGGA 57.066 30.769 0.00 0.00 0.00 4.37
1229 1360 6.635030 AACTTGAGTCACTTATTTTGGGAC 57.365 37.500 0.00 0.00 0.00 4.46
1230 1361 4.755123 ACTTGAGTCACTTATTTTGGGACG 59.245 41.667 0.00 0.00 33.84 4.79
1231 1362 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
1232 1363 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
1233 1364 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
1234 1365 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1235 1366 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
1236 1367 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
1237 1368 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
1238 1369 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
1239 1370 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
1321 1455 3.462021 GTTCACCATAGATCTCTGTGCC 58.538 50.000 0.00 0.00 34.29 5.01
1327 1461 4.819761 GATCTCTGTGCCCGCGCA 62.820 66.667 8.75 2.53 44.78 6.09
1394 1546 1.228644 AAGCCAGCCAAGTCATGCA 60.229 52.632 0.00 0.00 0.00 3.96
1660 1813 6.998074 CCTTAATTTCCCTGCAGATGTATACA 59.002 38.462 17.39 8.27 0.00 2.29
1813 1966 6.614694 TGCTACCTTACATTCTTAGGAACA 57.385 37.500 0.00 0.00 33.96 3.18
1814 1967 6.640518 TGCTACCTTACATTCTTAGGAACAG 58.359 40.000 0.00 0.00 33.96 3.16
1920 2073 9.859427 CACAAGATATCTTTAAAGGCATTTTCA 57.141 29.630 15.49 0.00 33.11 2.69
2019 2754 9.627395 TTTTTGTTTATTTTTCACGAGAACTCA 57.373 25.926 0.00 0.00 32.39 3.41
2050 2785 6.464222 TGAACACTCATCGGTCTTTTATCTT 58.536 36.000 0.00 0.00 0.00 2.40
2051 2786 6.368791 TGAACACTCATCGGTCTTTTATCTTG 59.631 38.462 0.00 0.00 0.00 3.02
2249 2984 5.213891 AGTGATTGTTGGTGGGAAAAATC 57.786 39.130 0.00 0.00 0.00 2.17
2257 2992 4.042271 TGGTGGGAAAAATCCTAAGGTC 57.958 45.455 0.00 0.00 0.00 3.85
2334 3069 0.035881 CTTGTGCAGGAAGAGCCTCA 59.964 55.000 0.00 0.00 46.97 3.86
2379 3114 6.918569 CGTCTATGGGTTTCTAGTGTAGATTG 59.081 42.308 0.00 0.00 34.22 2.67
2457 3192 5.687248 AGGAAACTACGAGGCACAATGCA 62.687 47.826 2.81 0.00 42.67 3.96
2626 3365 8.043710 CCATACTCATTTTACTGAACTTCTCCT 58.956 37.037 0.00 0.00 0.00 3.69
2753 3505 6.460103 AATAGGAAGGATGGCATGATACTT 57.540 37.500 3.81 3.81 0.00 2.24
2754 3506 4.803329 AGGAAGGATGGCATGATACTTT 57.197 40.909 3.81 0.00 0.00 2.66
2962 3719 0.958822 AACTGGAAAATGTCGTGGCC 59.041 50.000 0.00 0.00 0.00 5.36
3050 3826 7.836842 TGCATAGTCACACTAATTCAGACTTA 58.163 34.615 0.00 0.00 39.92 2.24
3051 3827 7.759886 TGCATAGTCACACTAATTCAGACTTAC 59.240 37.037 0.00 0.00 39.92 2.34
3052 3828 7.976734 GCATAGTCACACTAATTCAGACTTACT 59.023 37.037 0.00 0.00 39.92 2.24
3053 3829 9.862371 CATAGTCACACTAATTCAGACTTACTT 57.138 33.333 0.00 0.00 39.92 2.24
3056 3832 9.262358 AGTCACACTAATTCAGACTTACTTTTC 57.738 33.333 0.00 0.00 36.21 2.29
3057 3833 9.262358 GTCACACTAATTCAGACTTACTTTTCT 57.738 33.333 0.00 0.00 0.00 2.52
3058 3834 9.832445 TCACACTAATTCAGACTTACTTTTCTT 57.168 29.630 0.00 0.00 0.00 2.52
3061 3837 9.387123 CACTAATTCAGACTTACTTTTCTTTGC 57.613 33.333 0.00 0.00 0.00 3.68
3062 3838 9.343539 ACTAATTCAGACTTACTTTTCTTTGCT 57.656 29.630 0.00 0.00 0.00 3.91
3063 3839 9.818796 CTAATTCAGACTTACTTTTCTTTGCTC 57.181 33.333 0.00 0.00 0.00 4.26
3064 3840 8.457238 AATTCAGACTTACTTTTCTTTGCTCT 57.543 30.769 0.00 0.00 0.00 4.09
3065 3841 7.484035 TTCAGACTTACTTTTCTTTGCTCTC 57.516 36.000 0.00 0.00 0.00 3.20
3066 3842 6.821388 TCAGACTTACTTTTCTTTGCTCTCT 58.179 36.000 0.00 0.00 0.00 3.10
3067 3843 7.275920 TCAGACTTACTTTTCTTTGCTCTCTT 58.724 34.615 0.00 0.00 0.00 2.85
3068 3844 7.770897 TCAGACTTACTTTTCTTTGCTCTCTTT 59.229 33.333 0.00 0.00 0.00 2.52
3140 3917 3.181511 GCACGTGCATGCTTTAACTATGA 60.182 43.478 34.52 0.00 42.62 2.15
3182 4017 3.603158 TTGCCGATTAGCAGTTCACTA 57.397 42.857 0.00 0.00 45.13 2.74
3225 4060 5.634118 TCTGGAAGTGGAATGATCTTGTTT 58.366 37.500 0.00 0.00 33.76 2.83
3241 4076 9.052759 TGATCTTGTTTAGTTACTCCTTTGTTC 57.947 33.333 0.00 0.00 0.00 3.18
3339 4174 3.862877 TGTGATGCCATATGCTTAGGT 57.137 42.857 0.00 0.00 42.00 3.08
3340 4175 3.743521 TGTGATGCCATATGCTTAGGTC 58.256 45.455 0.00 0.00 42.00 3.85
3341 4176 3.392285 TGTGATGCCATATGCTTAGGTCT 59.608 43.478 0.00 0.00 42.00 3.85
3463 4304 5.236478 CCGACTTTATGTTGGGTATGACATC 59.764 44.000 0.00 0.00 44.73 3.06
3620 4464 4.677584 CTGCACATCTACTCTACCTTGTC 58.322 47.826 0.00 0.00 0.00 3.18
3850 4694 8.099537 ACTTTAGAGGCATCCATTCATATACTG 58.900 37.037 0.00 0.00 0.00 2.74
3924 4774 0.827507 GCCCTCCTTGTCCTGCAAAA 60.828 55.000 0.00 0.00 36.53 2.44
3925 4775 0.961753 CCCTCCTTGTCCTGCAAAAC 59.038 55.000 0.00 0.00 36.53 2.43
3996 4846 1.348250 GTGTGTGATATGTGGCGCG 59.652 57.895 0.00 0.00 0.00 6.86
4023 4873 6.127253 TGCTTACATCCCTAGTTGTAGGTTAC 60.127 42.308 0.00 0.00 44.27 2.50
4051 4901 3.288964 ACCGATATATTCCTAGAGGCCG 58.711 50.000 0.00 0.00 34.44 6.13
4052 4902 2.034812 CCGATATATTCCTAGAGGCCGC 59.965 54.545 0.00 0.00 34.44 6.53
4054 4904 2.615986 TATATTCCTAGAGGCCGCCA 57.384 50.000 13.15 0.00 34.44 5.69
4055 4905 1.958288 ATATTCCTAGAGGCCGCCAT 58.042 50.000 13.15 1.89 34.44 4.40
4056 4906 1.267121 TATTCCTAGAGGCCGCCATC 58.733 55.000 13.15 6.47 34.44 3.51
4057 4907 0.472734 ATTCCTAGAGGCCGCCATCT 60.473 55.000 13.15 13.50 34.44 2.90
4104 4955 1.071471 CGTGCCTCCAACTTGGACT 59.929 57.895 6.39 0.00 42.67 3.85
4165 5016 6.826668 TCAGAAACAGATGAAACCACTTCTA 58.173 36.000 0.00 0.00 34.86 2.10
4234 5085 1.600413 CCTCTTGAACTGCCAAAACGC 60.600 52.381 0.00 0.00 0.00 4.84
4247 5098 3.552068 GCCAAAACGCCTTCACATTAGTT 60.552 43.478 0.00 0.00 0.00 2.24
4268 5119 6.171213 AGTTAACAGAGGGTGTAACTAATGC 58.829 40.000 8.61 0.00 39.03 3.56
4318 5169 3.890756 TCGTTAGTGAACAGAGGGTGTAA 59.109 43.478 0.00 0.00 39.03 2.41
4319 5170 4.022589 TCGTTAGTGAACAGAGGGTGTAAG 60.023 45.833 0.00 0.00 39.03 2.34
4320 5171 4.022589 CGTTAGTGAACAGAGGGTGTAAGA 60.023 45.833 0.00 0.00 39.03 2.10
4321 5172 5.336531 CGTTAGTGAACAGAGGGTGTAAGAT 60.337 44.000 0.00 0.00 39.03 2.40
4322 5173 6.127814 CGTTAGTGAACAGAGGGTGTAAGATA 60.128 42.308 0.00 0.00 39.03 1.98
4323 5174 5.662674 AGTGAACAGAGGGTGTAAGATAC 57.337 43.478 0.00 0.00 39.03 2.24
4324 5175 5.334421 AGTGAACAGAGGGTGTAAGATACT 58.666 41.667 0.00 0.00 39.03 2.12
4325 5176 6.491383 AGTGAACAGAGGGTGTAAGATACTA 58.509 40.000 0.00 0.00 39.03 1.82
4326 5177 6.377712 AGTGAACAGAGGGTGTAAGATACTAC 59.622 42.308 0.00 0.00 39.03 2.73
4327 5178 6.377712 GTGAACAGAGGGTGTAAGATACTACT 59.622 42.308 0.00 0.00 39.03 2.57
4328 5179 6.602406 TGAACAGAGGGTGTAAGATACTACTC 59.398 42.308 0.00 0.00 39.03 2.59
4329 5180 5.447757 ACAGAGGGTGTAAGATACTACTCC 58.552 45.833 0.00 0.00 37.75 3.85
4333 5184 4.151121 GGGTGTAAGATACTACTCCCTCC 58.849 52.174 11.81 0.00 45.91 4.30
4334 5185 3.819902 GGTGTAAGATACTACTCCCTCCG 59.180 52.174 0.00 0.00 31.85 4.63
4335 5186 4.459330 GTGTAAGATACTACTCCCTCCGT 58.541 47.826 0.00 0.00 0.00 4.69
4336 5187 4.514816 GTGTAAGATACTACTCCCTCCGTC 59.485 50.000 0.00 0.00 0.00 4.79
4337 5188 2.955342 AGATACTACTCCCTCCGTCC 57.045 55.000 0.00 0.00 0.00 4.79
4338 5189 1.424684 AGATACTACTCCCTCCGTCCC 59.575 57.143 0.00 0.00 0.00 4.46
4339 5190 1.144503 GATACTACTCCCTCCGTCCCA 59.855 57.143 0.00 0.00 0.00 4.37
4340 5191 1.002069 TACTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
4341 5192 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4342 5193 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
4343 5194 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
4344 5195 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4345 5196 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4346 5197 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4347 5198 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4348 5199 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4349 5200 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
4350 5201 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4351 5202 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4352 5203 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
4353 5204 4.069304 TCCGTCCCAAAATAAGTGTCTTG 58.931 43.478 0.00 0.00 0.00 3.02
4354 5205 4.069304 CCGTCCCAAAATAAGTGTCTTGA 58.931 43.478 0.00 0.00 0.00 3.02
4355 5206 4.154195 CCGTCCCAAAATAAGTGTCTTGAG 59.846 45.833 0.00 0.00 0.00 3.02
4356 5207 4.378459 CGTCCCAAAATAAGTGTCTTGAGC 60.378 45.833 0.00 0.00 0.00 4.26
4357 5208 4.762251 GTCCCAAAATAAGTGTCTTGAGCT 59.238 41.667 0.00 0.00 0.00 4.09
4358 5209 5.241728 GTCCCAAAATAAGTGTCTTGAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
4359 5210 6.430000 GTCCCAAAATAAGTGTCTTGAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
4360 5211 6.655003 TCCCAAAATAAGTGTCTTGAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
4361 5212 6.431234 CCCAAAATAAGTGTCTTGAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
4362 5213 7.606456 CCCAAAATAAGTGTCTTGAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
4363 5214 8.443937 CCAAAATAAGTGTCTTGAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
4364 5215 8.988934 CAAAATAAGTGTCTTGAGCTTAGTACA 58.011 33.333 0.00 0.00 0.00 2.90
4365 5216 9.555727 AAAATAAGTGTCTTGAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
4366 5217 9.555727 AAATAAGTGTCTTGAGCTTAGTACAAA 57.444 29.630 0.00 0.00 0.00 2.83
4367 5218 9.726438 AATAAGTGTCTTGAGCTTAGTACAAAT 57.274 29.630 0.00 0.00 0.00 2.32
4368 5219 9.726438 ATAAGTGTCTTGAGCTTAGTACAAATT 57.274 29.630 0.00 0.00 0.00 1.82
4369 5220 8.451908 AAGTGTCTTGAGCTTAGTACAAATTT 57.548 30.769 0.00 0.00 0.00 1.82
4370 5221 7.865707 AGTGTCTTGAGCTTAGTACAAATTTG 58.134 34.615 16.67 16.67 0.00 2.32
4371 5222 7.499232 AGTGTCTTGAGCTTAGTACAAATTTGT 59.501 33.333 25.99 25.99 44.86 2.83
4372 5223 8.770828 GTGTCTTGAGCTTAGTACAAATTTGTA 58.229 33.333 23.91 23.91 42.35 2.41
4396 5247 7.614124 ACTAGAGCTAGTACTAAGTTGACAC 57.386 40.000 8.35 0.00 43.98 3.67
4397 5248 7.396418 ACTAGAGCTAGTACTAAGTTGACACT 58.604 38.462 8.35 0.00 43.98 3.55
4398 5249 7.884354 ACTAGAGCTAGTACTAAGTTGACACTT 59.116 37.037 8.35 0.00 43.98 3.16
4399 5250 9.381033 CTAGAGCTAGTACTAAGTTGACACTTA 57.619 37.037 3.76 0.00 41.81 2.24
4400 5251 8.810990 AGAGCTAGTACTAAGTTGACACTTAT 57.189 34.615 3.76 0.00 43.29 1.73
4401 5252 9.245481 AGAGCTAGTACTAAGTTGACACTTATT 57.755 33.333 3.76 0.00 43.29 1.40
4402 5253 9.857957 GAGCTAGTACTAAGTTGACACTTATTT 57.142 33.333 3.76 0.00 43.29 1.40
4409 5260 8.530269 ACTAAGTTGACACTTATTTTAGGACG 57.470 34.615 0.00 0.00 43.29 4.79
4410 5261 6.796705 AAGTTGACACTTATTTTAGGACGG 57.203 37.500 0.00 0.00 41.81 4.79
4411 5262 6.105397 AGTTGACACTTATTTTAGGACGGA 57.895 37.500 0.00 0.00 0.00 4.69
4412 5263 6.164176 AGTTGACACTTATTTTAGGACGGAG 58.836 40.000 0.00 0.00 0.00 4.63
4413 5264 5.080969 TGACACTTATTTTAGGACGGAGG 57.919 43.478 0.00 0.00 0.00 4.30
4414 5265 4.081309 TGACACTTATTTTAGGACGGAGGG 60.081 45.833 0.00 0.00 0.00 4.30
4415 5266 4.098894 ACACTTATTTTAGGACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
4416 5267 4.161754 ACACTTATTTTAGGACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
4538 5411 8.477984 TTTCTTACAGATATTTTGCATTTGCC 57.522 30.769 0.00 0.00 41.18 4.52
4644 5517 5.904362 AGGTTTATCTCCATGCTGAAAAC 57.096 39.130 0.00 2.44 0.00 2.43
4743 5616 3.119316 CGTCTCAGGTAGAGCATTTGTCT 60.119 47.826 0.00 0.00 44.35 3.41
4824 5697 0.397941 TGTCTTTCTGCAGGTGGAGG 59.602 55.000 15.13 0.00 34.00 4.30
4874 5747 2.189521 GGTGTGTCCTATGCGGGG 59.810 66.667 0.00 0.00 0.00 5.73
4957 5830 3.667087 CAAGCGCTGCTGGGTTTA 58.333 55.556 12.58 0.00 39.62 2.01
4958 5831 1.210155 CAAGCGCTGCTGGGTTTAC 59.790 57.895 12.58 0.00 39.62 2.01
4959 5832 1.228124 AAGCGCTGCTGGGTTTACA 60.228 52.632 12.58 0.00 39.62 2.41
4960 5833 1.237285 AAGCGCTGCTGGGTTTACAG 61.237 55.000 12.58 0.00 39.62 2.74
4961 5834 1.966451 GCGCTGCTGGGTTTACAGT 60.966 57.895 0.00 0.00 40.59 3.55
5137 6010 5.705441 TCATTGTGAAGATTGTAGGTGGAAC 59.295 40.000 0.00 0.00 0.00 3.62
5140 6013 3.927142 GTGAAGATTGTAGGTGGAACTCG 59.073 47.826 0.00 0.00 36.74 4.18
5157 6030 3.463944 ACTCGTCGACTTTTTGTTCCAT 58.536 40.909 14.70 0.00 0.00 3.41
5189 6062 6.430000 AGCTTTGACCGTTATACTGAACAAAT 59.570 34.615 0.00 0.00 0.00 2.32
5375 6264 6.648310 ACTCGATGGATGTTGCTGATAAATAG 59.352 38.462 0.00 0.00 0.00 1.73
5397 6287 1.615392 AGGCCACTGAAAATCACAAGC 59.385 47.619 5.01 0.00 0.00 4.01
5398 6288 1.340889 GGCCACTGAAAATCACAAGCA 59.659 47.619 0.00 0.00 0.00 3.91
5408 6298 9.630098 ACTGAAAATCACAAGCATAAATTAGTG 57.370 29.630 0.00 0.00 0.00 2.74
5445 6335 5.047660 GCATTACCACCCACTGAATTAACAA 60.048 40.000 0.00 0.00 0.00 2.83
5487 7453 7.282450 ACTTTATGGTTCATCCTCGAAAATACC 59.718 37.037 0.00 0.00 37.07 2.73
5592 7558 5.191727 TGGAATGATTAACACACTCCCAT 57.808 39.130 8.72 0.00 0.00 4.00
5594 7560 5.192927 GGAATGATTAACACACTCCCATGA 58.807 41.667 0.00 0.00 0.00 3.07
5644 7610 7.823745 AAAGCACCGGATGATTTAGAATAAT 57.176 32.000 9.46 0.00 45.02 1.28
5645 7611 8.918202 AAAGCACCGGATGATTTAGAATAATA 57.082 30.769 9.46 0.00 45.02 0.98
5646 7612 7.907214 AGCACCGGATGATTTAGAATAATAC 57.093 36.000 9.46 0.00 0.00 1.89
5690 7658 4.137543 GACCCATAATCCTGATGTTCCAC 58.862 47.826 0.00 0.00 0.00 4.02
5704 7672 5.180492 TGATGTTCCACCGAATGTTTAACTC 59.820 40.000 0.00 0.00 0.00 3.01
5709 7677 2.222213 CACCGAATGTTTAACTCGCACA 59.778 45.455 1.91 0.00 0.00 4.57
5768 7737 5.047306 CCACCACAACTAGTCTCAGATAACA 60.047 44.000 0.00 0.00 0.00 2.41
5815 7789 2.186384 CTTCTCCGCCTCTGCCAG 59.814 66.667 0.00 0.00 0.00 4.85
5855 7829 1.038130 CGACCTCCTCGATCTTGGGT 61.038 60.000 0.00 0.00 46.14 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.767255 GTGCCTCCCTGCCTCGTG 62.767 72.222 0.00 0.00 0.00 4.35
30 31 3.728373 GTGTGCCCAGGGGGTAGG 61.728 72.222 7.91 0.00 46.51 3.18
31 32 2.933287 TGTGTGCCCAGGGGGTAG 60.933 66.667 7.91 0.00 46.51 3.18
32 33 3.253838 GTGTGTGCCCAGGGGGTA 61.254 66.667 7.91 0.00 46.51 3.69
42 43 4.660938 GAGGGTGGGGGTGTGTGC 62.661 72.222 0.00 0.00 0.00 4.57
43 44 2.538141 ATGAGGGTGGGGGTGTGTG 61.538 63.158 0.00 0.00 0.00 3.82
44 45 2.121506 ATGAGGGTGGGGGTGTGT 60.122 61.111 0.00 0.00 0.00 3.72
45 46 2.356278 CATGAGGGTGGGGGTGTG 59.644 66.667 0.00 0.00 0.00 3.82
46 47 2.941025 CCATGAGGGTGGGGGTGT 60.941 66.667 0.00 0.00 35.55 4.16
56 57 4.181010 CACGAGGGGCCCATGAGG 62.181 72.222 27.72 10.84 39.47 3.86
57 58 4.181010 CCACGAGGGGCCCATGAG 62.181 72.222 27.72 15.81 0.00 2.90
67 68 3.775654 GTCAGGGGAGCCACGAGG 61.776 72.222 0.00 0.00 38.23 4.63
68 69 3.775654 GGTCAGGGGAGCCACGAG 61.776 72.222 0.00 0.00 35.49 4.18
71 72 4.083862 GTCGGTCAGGGGAGCCAC 62.084 72.222 0.00 0.00 38.30 5.01
72 73 2.449967 TAAGTCGGTCAGGGGAGCCA 62.450 60.000 0.00 0.00 38.30 4.75
73 74 1.049289 ATAAGTCGGTCAGGGGAGCC 61.049 60.000 0.00 0.00 38.30 4.70
74 75 0.831307 AATAAGTCGGTCAGGGGAGC 59.169 55.000 0.00 0.00 38.17 4.70
75 76 2.481449 CGAAATAAGTCGGTCAGGGGAG 60.481 54.545 0.00 0.00 37.37 4.30
76 77 1.479323 CGAAATAAGTCGGTCAGGGGA 59.521 52.381 0.00 0.00 37.37 4.81
77 78 1.935933 CGAAATAAGTCGGTCAGGGG 58.064 55.000 0.00 0.00 37.37 4.79
78 79 1.287425 GCGAAATAAGTCGGTCAGGG 58.713 55.000 0.00 0.00 41.40 4.45
79 80 1.134788 AGGCGAAATAAGTCGGTCAGG 60.135 52.381 0.00 0.00 41.40 3.86
80 81 2.295253 AGGCGAAATAAGTCGGTCAG 57.705 50.000 0.00 0.00 41.40 3.51
81 82 5.717078 ATATAGGCGAAATAAGTCGGTCA 57.283 39.130 0.00 0.00 41.40 4.02
82 83 7.256286 ACATATATAGGCGAAATAAGTCGGTC 58.744 38.462 0.00 0.00 41.40 4.79
83 84 7.166691 ACATATATAGGCGAAATAAGTCGGT 57.833 36.000 0.00 0.00 41.40 4.69
84 85 6.696148 GGACATATATAGGCGAAATAAGTCGG 59.304 42.308 0.00 0.00 41.40 4.79
85 86 7.255569 TGGACATATATAGGCGAAATAAGTCG 58.744 38.462 0.00 0.00 43.98 4.18
91 92 8.594550 GGGTATATGGACATATATAGGCGAAAT 58.405 37.037 13.43 0.00 38.21 2.17
92 93 7.787904 AGGGTATATGGACATATATAGGCGAAA 59.212 37.037 13.43 0.00 38.21 3.46
93 94 7.302948 AGGGTATATGGACATATATAGGCGAA 58.697 38.462 13.43 0.00 38.21 4.70
94 95 6.860034 AGGGTATATGGACATATATAGGCGA 58.140 40.000 13.43 0.00 38.21 5.54
95 96 8.645814 TTAGGGTATATGGACATATATAGGCG 57.354 38.462 13.43 0.00 38.21 5.52
102 103 9.667107 CGATGTTTTTAGGGTATATGGACATAT 57.333 33.333 9.53 9.53 37.69 1.78
103 104 8.098286 CCGATGTTTTTAGGGTATATGGACATA 58.902 37.037 0.00 0.00 0.00 2.29
104 105 6.940298 CCGATGTTTTTAGGGTATATGGACAT 59.060 38.462 0.00 0.00 0.00 3.06
105 106 6.292923 CCGATGTTTTTAGGGTATATGGACA 58.707 40.000 0.00 0.00 0.00 4.02
106 107 5.704053 CCCGATGTTTTTAGGGTATATGGAC 59.296 44.000 0.00 0.00 39.05 4.02
107 108 5.221966 CCCCGATGTTTTTAGGGTATATGGA 60.222 44.000 0.00 0.00 42.26 3.41
108 109 5.007682 CCCCGATGTTTTTAGGGTATATGG 58.992 45.833 0.00 0.00 42.26 2.74
109 110 5.007682 CCCCCGATGTTTTTAGGGTATATG 58.992 45.833 0.00 0.00 42.26 1.78
110 111 4.507869 GCCCCCGATGTTTTTAGGGTATAT 60.508 45.833 0.00 0.00 42.26 0.86
111 112 3.181441 GCCCCCGATGTTTTTAGGGTATA 60.181 47.826 0.00 0.00 42.26 1.47
112 113 2.423803 GCCCCCGATGTTTTTAGGGTAT 60.424 50.000 0.00 0.00 42.26 2.73
113 114 1.064537 GCCCCCGATGTTTTTAGGGTA 60.065 52.381 0.00 0.00 42.26 3.69
114 115 0.323999 GCCCCCGATGTTTTTAGGGT 60.324 55.000 0.00 0.00 42.26 4.34
115 116 0.323908 TGCCCCCGATGTTTTTAGGG 60.324 55.000 0.00 0.00 43.41 3.53
116 117 0.815095 GTGCCCCCGATGTTTTTAGG 59.185 55.000 0.00 0.00 0.00 2.69
117 118 1.540267 TGTGCCCCCGATGTTTTTAG 58.460 50.000 0.00 0.00 0.00 1.85
118 119 1.996798 TTGTGCCCCCGATGTTTTTA 58.003 45.000 0.00 0.00 0.00 1.52
119 120 1.347062 ATTGTGCCCCCGATGTTTTT 58.653 45.000 0.00 0.00 0.00 1.94
120 121 2.099405 CTATTGTGCCCCCGATGTTTT 58.901 47.619 0.00 0.00 0.00 2.43
121 122 1.283613 TCTATTGTGCCCCCGATGTTT 59.716 47.619 0.00 0.00 0.00 2.83
122 123 0.916086 TCTATTGTGCCCCCGATGTT 59.084 50.000 0.00 0.00 0.00 2.71
123 124 1.072331 GATCTATTGTGCCCCCGATGT 59.928 52.381 0.00 0.00 0.00 3.06
124 125 1.072173 TGATCTATTGTGCCCCCGATG 59.928 52.381 0.00 0.00 0.00 3.84
125 126 1.349026 CTGATCTATTGTGCCCCCGAT 59.651 52.381 0.00 0.00 0.00 4.18
126 127 0.758734 CTGATCTATTGTGCCCCCGA 59.241 55.000 0.00 0.00 0.00 5.14
127 128 0.250467 CCTGATCTATTGTGCCCCCG 60.250 60.000 0.00 0.00 0.00 5.73
128 129 1.072965 CTCCTGATCTATTGTGCCCCC 59.927 57.143 0.00 0.00 0.00 5.40
129 130 1.771255 ACTCCTGATCTATTGTGCCCC 59.229 52.381 0.00 0.00 0.00 5.80
130 131 3.471680 GAACTCCTGATCTATTGTGCCC 58.528 50.000 0.00 0.00 0.00 5.36
131 132 3.471680 GGAACTCCTGATCTATTGTGCC 58.528 50.000 0.00 0.00 0.00 5.01
132 133 3.126831 CGGAACTCCTGATCTATTGTGC 58.873 50.000 0.00 0.00 0.00 4.57
133 134 3.126831 GCGGAACTCCTGATCTATTGTG 58.873 50.000 0.00 0.00 0.00 3.33
134 135 2.103263 GGCGGAACTCCTGATCTATTGT 59.897 50.000 0.00 0.00 0.00 2.71
135 136 2.760374 GGCGGAACTCCTGATCTATTG 58.240 52.381 0.00 0.00 0.00 1.90
136 137 1.341531 CGGCGGAACTCCTGATCTATT 59.658 52.381 0.00 0.00 0.00 1.73
137 138 0.962489 CGGCGGAACTCCTGATCTAT 59.038 55.000 0.00 0.00 0.00 1.98
138 139 1.735376 GCGGCGGAACTCCTGATCTA 61.735 60.000 9.78 0.00 0.00 1.98
139 140 3.082579 GCGGCGGAACTCCTGATCT 62.083 63.158 9.78 0.00 0.00 2.75
140 141 2.586357 GCGGCGGAACTCCTGATC 60.586 66.667 9.78 0.00 0.00 2.92
141 142 4.162690 GGCGGCGGAACTCCTGAT 62.163 66.667 9.78 0.00 0.00 2.90
146 147 3.423154 CTTGTGGCGGCGGAACTC 61.423 66.667 9.78 0.00 0.00 3.01
153 154 3.605749 TACAGAGGCTTGTGGCGGC 62.606 63.158 0.00 0.00 44.18 6.53
154 155 1.448540 CTACAGAGGCTTGTGGCGG 60.449 63.158 11.08 0.00 44.18 6.13
155 156 2.103042 GCTACAGAGGCTTGTGGCG 61.103 63.158 17.19 4.27 43.90 5.69
156 157 3.896479 GCTACAGAGGCTTGTGGC 58.104 61.111 17.19 17.19 45.96 5.01
157 158 4.625800 GGCTACAGAGGCTTGTGG 57.374 61.111 11.08 9.60 44.83 4.17
164 165 1.886542 GGTTTTTGGTGGCTACAGAGG 59.113 52.381 1.52 0.00 0.00 3.69
165 166 2.582052 TGGTTTTTGGTGGCTACAGAG 58.418 47.619 1.52 0.00 0.00 3.35
166 167 2.738587 TGGTTTTTGGTGGCTACAGA 57.261 45.000 1.52 0.00 0.00 3.41
167 168 3.611530 CGATTGGTTTTTGGTGGCTACAG 60.612 47.826 1.52 0.00 0.00 2.74
168 169 2.294791 CGATTGGTTTTTGGTGGCTACA 59.705 45.455 1.52 0.00 0.00 2.74
169 170 2.352323 CCGATTGGTTTTTGGTGGCTAC 60.352 50.000 0.00 0.00 0.00 3.58
170 171 1.889829 CCGATTGGTTTTTGGTGGCTA 59.110 47.619 0.00 0.00 0.00 3.93
171 172 0.678950 CCGATTGGTTTTTGGTGGCT 59.321 50.000 0.00 0.00 0.00 4.75
172 173 0.320334 CCCGATTGGTTTTTGGTGGC 60.320 55.000 0.00 0.00 0.00 5.01
173 174 0.320050 CCCCGATTGGTTTTTGGTGG 59.680 55.000 0.00 0.00 0.00 4.61
174 175 0.320334 GCCCCGATTGGTTTTTGGTG 60.320 55.000 0.00 0.00 0.00 4.17
175 176 1.476845 GGCCCCGATTGGTTTTTGGT 61.477 55.000 0.00 0.00 0.00 3.67
176 177 1.295101 GGCCCCGATTGGTTTTTGG 59.705 57.895 0.00 0.00 0.00 3.28
177 178 1.191489 AGGGCCCCGATTGGTTTTTG 61.191 55.000 21.43 0.00 0.00 2.44
178 179 1.157513 AGGGCCCCGATTGGTTTTT 59.842 52.632 21.43 0.00 0.00 1.94
179 180 1.609210 CAGGGCCCCGATTGGTTTT 60.609 57.895 21.43 0.00 0.00 2.43
180 181 2.037208 CAGGGCCCCGATTGGTTT 59.963 61.111 21.43 0.00 0.00 3.27
181 182 2.781431 GAACAGGGCCCCGATTGGTT 62.781 60.000 21.43 13.50 0.00 3.67
182 183 3.264845 AACAGGGCCCCGATTGGT 61.265 61.111 21.43 5.61 0.00 3.67
183 184 2.440247 GAACAGGGCCCCGATTGG 60.440 66.667 21.43 3.69 0.00 3.16
184 185 2.440247 GGAACAGGGCCCCGATTG 60.440 66.667 21.43 13.40 0.00 2.67
185 186 4.109675 CGGAACAGGGCCCCGATT 62.110 66.667 21.43 10.81 45.58 3.34
193 194 4.323477 TTCGGTGCCGGAACAGGG 62.323 66.667 16.38 2.73 40.25 4.45
194 195 3.047877 GTTCGGTGCCGGAACAGG 61.048 66.667 16.38 5.63 40.25 4.00
195 196 1.671054 ATGTTCGGTGCCGGAACAG 60.671 57.895 16.38 11.37 40.08 3.16
196 197 1.963855 CATGTTCGGTGCCGGAACA 60.964 57.895 16.38 21.54 40.55 3.18
197 198 2.686816 CCATGTTCGGTGCCGGAAC 61.687 63.158 5.05 3.94 40.25 3.62
198 199 2.359354 CCATGTTCGGTGCCGGAA 60.359 61.111 5.05 0.00 40.25 4.30
199 200 4.402528 CCCATGTTCGGTGCCGGA 62.403 66.667 5.05 0.00 40.25 5.14
201 202 4.402528 TCCCCATGTTCGGTGCCG 62.403 66.667 3.94 3.94 41.35 5.69
202 203 2.438434 CTCCCCATGTTCGGTGCC 60.438 66.667 0.00 0.00 0.00 5.01
203 204 1.303317 AACTCCCCATGTTCGGTGC 60.303 57.895 0.00 0.00 0.00 5.01
204 205 0.676782 GGAACTCCCCATGTTCGGTG 60.677 60.000 0.00 0.00 43.21 4.94
205 206 1.683441 GGAACTCCCCATGTTCGGT 59.317 57.895 0.00 0.00 43.21 4.69
206 207 4.637771 GGAACTCCCCATGTTCGG 57.362 61.111 0.00 0.00 43.21 4.30
303 304 8.579682 AAAGAAGTGCAAGAAATCATAAACAC 57.420 30.769 0.00 0.00 0.00 3.32
329 330 2.417787 GCAAATGCAAAGGGAGCCTAAG 60.418 50.000 0.00 0.00 41.59 2.18
380 381 6.918022 GGGACAACTTGAAACAAGACATTTAG 59.082 38.462 16.65 3.14 0.00 1.85
518 530 4.660303 AGCTAGATTGTCATAATCCACCCA 59.340 41.667 0.00 0.00 0.00 4.51
618 630 8.569683 CAATGCGATGTGCTTATTTTATAATCG 58.430 33.333 0.00 0.00 46.63 3.34
700 715 0.744874 GGTACAGATACAGCAGCCGA 59.255 55.000 0.00 0.00 32.40 5.54
950 971 7.843490 TCTGACACTATACCTGCATAAAAAC 57.157 36.000 0.00 0.00 0.00 2.43
1130 1261 2.983296 AGGGAGTATGGATGAAGGGAG 58.017 52.381 0.00 0.00 0.00 4.30
1131 1262 3.311327 TGAAGGGAGTATGGATGAAGGGA 60.311 47.826 0.00 0.00 0.00 4.20
1132 1263 3.048600 TGAAGGGAGTATGGATGAAGGG 58.951 50.000 0.00 0.00 0.00 3.95
1133 1264 4.263243 GGATGAAGGGAGTATGGATGAAGG 60.263 50.000 0.00 0.00 0.00 3.46
1134 1265 4.263243 GGGATGAAGGGAGTATGGATGAAG 60.263 50.000 0.00 0.00 0.00 3.02
1135 1266 3.652869 GGGATGAAGGGAGTATGGATGAA 59.347 47.826 0.00 0.00 0.00 2.57
1136 1267 3.251484 GGGATGAAGGGAGTATGGATGA 58.749 50.000 0.00 0.00 0.00 2.92
1137 1268 2.981784 TGGGATGAAGGGAGTATGGATG 59.018 50.000 0.00 0.00 0.00 3.51
1138 1269 3.367280 TGGGATGAAGGGAGTATGGAT 57.633 47.619 0.00 0.00 0.00 3.41
1139 1270 2.887454 TGGGATGAAGGGAGTATGGA 57.113 50.000 0.00 0.00 0.00 3.41
1140 1271 3.951563 TTTGGGATGAAGGGAGTATGG 57.048 47.619 0.00 0.00 0.00 2.74
1141 1272 7.013655 CACTAATTTTGGGATGAAGGGAGTATG 59.986 40.741 0.00 0.00 0.00 2.39
1142 1273 7.062957 CACTAATTTTGGGATGAAGGGAGTAT 58.937 38.462 0.00 0.00 0.00 2.12
1143 1274 6.216662 TCACTAATTTTGGGATGAAGGGAGTA 59.783 38.462 0.00 0.00 0.00 2.59
1144 1275 5.015178 TCACTAATTTTGGGATGAAGGGAGT 59.985 40.000 0.00 0.00 0.00 3.85
1145 1276 5.358160 GTCACTAATTTTGGGATGAAGGGAG 59.642 44.000 0.00 0.00 0.00 4.30
1146 1277 5.015178 AGTCACTAATTTTGGGATGAAGGGA 59.985 40.000 0.00 0.00 0.00 4.20
1147 1278 5.264395 AGTCACTAATTTTGGGATGAAGGG 58.736 41.667 0.00 0.00 0.00 3.95
1148 1279 5.945784 TGAGTCACTAATTTTGGGATGAAGG 59.054 40.000 0.00 0.00 0.00 3.46
1149 1280 7.175641 AGTTGAGTCACTAATTTTGGGATGAAG 59.824 37.037 0.00 0.00 0.00 3.02
1150 1281 7.004086 AGTTGAGTCACTAATTTTGGGATGAA 58.996 34.615 0.00 0.00 0.00 2.57
1151 1282 6.542821 AGTTGAGTCACTAATTTTGGGATGA 58.457 36.000 0.00 0.00 0.00 2.92
1152 1283 6.824305 AGTTGAGTCACTAATTTTGGGATG 57.176 37.500 0.00 0.00 0.00 3.51
1153 1284 7.234355 AGAAGTTGAGTCACTAATTTTGGGAT 58.766 34.615 0.00 0.00 0.00 3.85
1154 1285 6.601332 AGAAGTTGAGTCACTAATTTTGGGA 58.399 36.000 0.00 0.00 0.00 4.37
1155 1286 6.884280 AGAAGTTGAGTCACTAATTTTGGG 57.116 37.500 0.00 0.00 0.00 4.12
1156 1287 9.057089 AGTAAGAAGTTGAGTCACTAATTTTGG 57.943 33.333 0.00 0.00 0.00 3.28
1163 1294 9.745880 CAAAGTTAGTAAGAAGTTGAGTCACTA 57.254 33.333 0.00 0.00 0.00 2.74
1164 1295 8.258708 ACAAAGTTAGTAAGAAGTTGAGTCACT 58.741 33.333 0.00 0.00 0.00 3.41
1165 1296 8.421673 ACAAAGTTAGTAAGAAGTTGAGTCAC 57.578 34.615 0.00 0.00 0.00 3.67
1166 1297 9.525409 GTACAAAGTTAGTAAGAAGTTGAGTCA 57.475 33.333 0.00 0.00 0.00 3.41
1167 1298 9.747293 AGTACAAAGTTAGTAAGAAGTTGAGTC 57.253 33.333 0.00 0.00 0.00 3.36
1203 1334 8.793592 GTCCCAAAATAAGTGACTCAAGTTTAT 58.206 33.333 0.00 0.00 0.00 1.40
1204 1335 7.041644 CGTCCCAAAATAAGTGACTCAAGTTTA 60.042 37.037 0.00 0.00 0.00 2.01
1205 1336 6.238648 CGTCCCAAAATAAGTGACTCAAGTTT 60.239 38.462 0.00 0.00 0.00 2.66
1206 1337 5.238650 CGTCCCAAAATAAGTGACTCAAGTT 59.761 40.000 0.00 0.00 0.00 2.66
1207 1338 4.755123 CGTCCCAAAATAAGTGACTCAAGT 59.245 41.667 0.00 0.00 0.00 3.16
1208 1339 4.154195 CCGTCCCAAAATAAGTGACTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
1209 1340 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1210 1341 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
1211 1342 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
1212 1343 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
1213 1344 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
1214 1345 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
1215 1346 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1216 1347 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
1217 1348 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
1218 1349 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
1219 1350 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1220 1351 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
1221 1352 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
1222 1353 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
1223 1354 1.002069 TACTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
1224 1355 1.229131 ATACTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
1225 1356 3.735720 ATATACTACTCCCTCCGTCCC 57.264 52.381 0.00 0.00 0.00 4.46
1226 1357 6.944862 TCTAAAATATACTACTCCCTCCGTCC 59.055 42.308 0.00 0.00 0.00 4.79
1227 1358 7.992754 TCTAAAATATACTACTCCCTCCGTC 57.007 40.000 0.00 0.00 0.00 4.79
1228 1359 8.773033 TTTCTAAAATATACTACTCCCTCCGT 57.227 34.615 0.00 0.00 0.00 4.69
1229 1360 8.858094 ACTTTCTAAAATATACTACTCCCTCCG 58.142 37.037 0.00 0.00 0.00 4.63
1233 1364 9.473640 CGGAACTTTCTAAAATATACTACTCCC 57.526 37.037 0.00 0.00 0.00 4.30
1239 1370 8.943002 CACCAACGGAACTTTCTAAAATATACT 58.057 33.333 0.00 0.00 0.00 2.12
1460 1612 3.037549 AGAAAAGGTGGCATGGAAAACA 58.962 40.909 0.00 0.00 0.00 2.83
1660 1813 3.753272 CGATGTTGGTCTGAACCTTCAAT 59.247 43.478 0.00 0.00 46.60 2.57
1720 1873 9.216117 CAAATAGTACCCATAATTACCTGTAGC 57.784 37.037 0.00 0.00 0.00 3.58
1839 1992 2.419324 CTCTTAGTGAGACGCGGTAACT 59.581 50.000 12.47 8.60 45.39 2.24
1851 2004 4.011966 TCACGGTGTAGACTCTTAGTGA 57.988 45.455 8.17 0.00 35.38 3.41
1994 2728 9.284594 CTGAGTTCTCGTGAAAAATAAACAAAA 57.715 29.630 0.74 0.00 33.52 2.44
2019 2754 4.221703 AGACCGATGAGTGTTCAGATTTCT 59.778 41.667 0.00 0.00 36.61 2.52
2050 2785 5.183713 CAGATTTCAGATGCCAAAAGTACCA 59.816 40.000 0.00 0.00 0.00 3.25
2051 2786 5.393461 CCAGATTTCAGATGCCAAAAGTACC 60.393 44.000 0.00 0.00 0.00 3.34
2257 2992 8.311650 AGTAACATAAGTTTCTGTAGCAACAG 57.688 34.615 0.00 0.00 45.00 3.16
2298 3033 5.711506 TGCACAAGGTTGAGACATATTTCAT 59.288 36.000 0.00 0.00 0.00 2.57
2379 3114 2.163010 CCAATCAACACATCTCCAGTGC 59.837 50.000 0.00 0.00 40.59 4.40
2457 3192 7.707624 TCATGGAGATTTGCTAACAGAAAAT 57.292 32.000 0.00 0.00 36.18 1.82
2489 3224 2.568623 ACTTGGCCACCTGAACTTAG 57.431 50.000 3.88 0.00 0.00 2.18
2753 3505 7.713734 ACAGTGTGTAGTATTTAGCTAGGAA 57.286 36.000 0.00 0.00 0.00 3.36
2754 3506 7.713734 AACAGTGTGTAGTATTTAGCTAGGA 57.286 36.000 0.00 0.00 0.00 2.94
3003 3760 7.089538 TGCAAAAATGTTACACACCTGATATG 58.910 34.615 0.00 0.00 0.00 1.78
3050 3826 5.654209 ACTGGAAAAGAGAGCAAAGAAAAGT 59.346 36.000 0.00 0.00 0.00 2.66
3051 3827 6.141560 ACTGGAAAAGAGAGCAAAGAAAAG 57.858 37.500 0.00 0.00 0.00 2.27
3052 3828 6.405842 GGAACTGGAAAAGAGAGCAAAGAAAA 60.406 38.462 0.00 0.00 0.00 2.29
3053 3829 5.067805 GGAACTGGAAAAGAGAGCAAAGAAA 59.932 40.000 0.00 0.00 0.00 2.52
3054 3830 4.580580 GGAACTGGAAAAGAGAGCAAAGAA 59.419 41.667 0.00 0.00 0.00 2.52
3055 3831 4.137543 GGAACTGGAAAAGAGAGCAAAGA 58.862 43.478 0.00 0.00 0.00 2.52
3056 3832 4.140536 AGGAACTGGAAAAGAGAGCAAAG 58.859 43.478 0.00 0.00 37.18 2.77
3057 3833 4.137543 GAGGAACTGGAAAAGAGAGCAAA 58.862 43.478 0.00 0.00 41.55 3.68
3058 3834 3.496870 GGAGGAACTGGAAAAGAGAGCAA 60.497 47.826 0.00 0.00 41.55 3.91
3059 3835 2.039084 GGAGGAACTGGAAAAGAGAGCA 59.961 50.000 0.00 0.00 41.55 4.26
3060 3836 2.304470 AGGAGGAACTGGAAAAGAGAGC 59.696 50.000 0.00 0.00 41.55 4.09
3061 3837 4.632327 AAGGAGGAACTGGAAAAGAGAG 57.368 45.455 0.00 0.00 41.55 3.20
3062 3838 5.388599 AAAAGGAGGAACTGGAAAAGAGA 57.611 39.130 0.00 0.00 41.55 3.10
3140 3917 8.806146 GGCAAACCATATATTCATAGTTCCAAT 58.194 33.333 0.00 0.00 35.26 3.16
3182 4017 6.950041 TCCAGAAACTTTGATCATCCAAATCT 59.050 34.615 0.00 0.00 35.72 2.40
3225 4060 6.444633 CAGAACGAGAACAAAGGAGTAACTA 58.555 40.000 0.00 0.00 0.00 2.24
3241 4076 2.693069 ACTTCCAGAATGCAGAACGAG 58.307 47.619 0.00 0.00 31.97 4.18
3463 4304 5.597806 CAGATGGAAATGAACATTGGATGG 58.402 41.667 0.69 0.00 33.60 3.51
3620 4464 0.179020 TAATCGGAGCAATGGCCCTG 60.179 55.000 0.00 0.00 42.56 4.45
3850 4694 4.298332 CATGGCAAAGAAACACAACTACC 58.702 43.478 0.00 0.00 0.00 3.18
3912 4762 2.954989 TGCATAGTGTTTTGCAGGACAA 59.045 40.909 5.88 0.00 43.54 3.18
3996 4846 3.268023 ACAACTAGGGATGTAAGCAGC 57.732 47.619 0.00 0.00 0.00 5.25
4023 4873 7.316640 CCTCTAGGAATATATCGGTCAAGTTG 58.683 42.308 0.00 0.00 37.39 3.16
4104 4955 5.630121 ACTTGGATGTGTTGAACTGGAATA 58.370 37.500 0.00 0.00 0.00 1.75
4234 5085 5.643777 CACCCTCTGTTAACTAATGTGAAGG 59.356 44.000 7.22 2.53 0.00 3.46
4247 5098 5.748670 TGCATTAGTTACACCCTCTGTTA 57.251 39.130 0.00 0.00 33.91 2.41
4268 5119 2.730183 TGAACTGCGAAAACGTCTTG 57.270 45.000 0.00 0.00 0.00 3.02
4318 5169 1.424684 GGGACGGAGGGAGTAGTATCT 59.575 57.143 0.00 0.00 0.00 1.98
4319 5170 1.144503 TGGGACGGAGGGAGTAGTATC 59.855 57.143 0.00 0.00 0.00 2.24
4320 5171 1.229131 TGGGACGGAGGGAGTAGTAT 58.771 55.000 0.00 0.00 0.00 2.12
4321 5172 1.002069 TTGGGACGGAGGGAGTAGTA 58.998 55.000 0.00 0.00 0.00 1.82
4322 5173 0.115745 TTTGGGACGGAGGGAGTAGT 59.884 55.000 0.00 0.00 0.00 2.73
4323 5174 1.272807 TTTTGGGACGGAGGGAGTAG 58.727 55.000 0.00 0.00 0.00 2.57
4324 5175 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4325 5176 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4326 5177 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4327 5178 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4328 5179 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4329 5180 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4330 5181 3.939066 AGACACTTATTTTGGGACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
4331 5182 4.069304 CAAGACACTTATTTTGGGACGGA 58.931 43.478 0.00 0.00 0.00 4.69
4332 5183 4.069304 TCAAGACACTTATTTTGGGACGG 58.931 43.478 0.00 0.00 0.00 4.79
4333 5184 4.378459 GCTCAAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
4334 5185 4.762251 AGCTCAAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
4335 5186 4.985538 AGCTCAAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
4336 5187 5.712152 AAGCTCAAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
4337 5188 7.440523 ACTAAGCTCAAGACACTTATTTTGG 57.559 36.000 3.19 0.00 0.00 3.28
4338 5189 8.988934 TGTACTAAGCTCAAGACACTTATTTTG 58.011 33.333 3.19 0.00 0.00 2.44
4339 5190 9.555727 TTGTACTAAGCTCAAGACACTTATTTT 57.444 29.630 3.19 0.00 0.00 1.82
4340 5191 9.555727 TTTGTACTAAGCTCAAGACACTTATTT 57.444 29.630 3.19 0.00 0.00 1.40
4341 5192 9.726438 ATTTGTACTAAGCTCAAGACACTTATT 57.274 29.630 3.19 0.00 0.00 1.40
4342 5193 9.726438 AATTTGTACTAAGCTCAAGACACTTAT 57.274 29.630 3.19 0.00 0.00 1.73
4343 5194 9.555727 AAATTTGTACTAAGCTCAAGACACTTA 57.444 29.630 3.19 0.00 0.00 2.24
4344 5195 8.345565 CAAATTTGTACTAAGCTCAAGACACTT 58.654 33.333 10.15 0.00 0.00 3.16
4345 5196 7.499232 ACAAATTTGTACTAAGCTCAAGACACT 59.501 33.333 22.10 0.00 40.16 3.55
4346 5197 7.639945 ACAAATTTGTACTAAGCTCAAGACAC 58.360 34.615 22.10 2.09 40.16 3.67
4347 5198 7.801716 ACAAATTTGTACTAAGCTCAAGACA 57.198 32.000 22.10 0.00 40.16 3.41
4371 5222 8.538701 AGTGTCAACTTAGTACTAGCTCTAGTA 58.461 37.037 11.59 11.59 39.28 1.82
4372 5223 7.396418 AGTGTCAACTTAGTACTAGCTCTAGT 58.604 38.462 13.42 13.42 40.65 2.57
4373 5224 7.852971 AGTGTCAACTTAGTACTAGCTCTAG 57.147 40.000 2.23 2.55 34.49 2.43
4388 5239 6.105397 TCCGTCCTAAAATAAGTGTCAACT 57.895 37.500 0.00 0.00 38.71 3.16
4389 5240 5.350640 CCTCCGTCCTAAAATAAGTGTCAAC 59.649 44.000 0.00 0.00 0.00 3.18
4390 5241 5.484715 CCTCCGTCCTAAAATAAGTGTCAA 58.515 41.667 0.00 0.00 0.00 3.18
4391 5242 4.081309 CCCTCCGTCCTAAAATAAGTGTCA 60.081 45.833 0.00 0.00 0.00 3.58
4392 5243 4.161001 TCCCTCCGTCCTAAAATAAGTGTC 59.839 45.833 0.00 0.00 0.00 3.67
4393 5244 4.098894 TCCCTCCGTCCTAAAATAAGTGT 58.901 43.478 0.00 0.00 0.00 3.55
4394 5245 4.161754 ACTCCCTCCGTCCTAAAATAAGTG 59.838 45.833 0.00 0.00 0.00 3.16
4395 5246 4.359996 ACTCCCTCCGTCCTAAAATAAGT 58.640 43.478 0.00 0.00 0.00 2.24
4396 5247 5.832060 TCTACTCCCTCCGTCCTAAAATAAG 59.168 44.000 0.00 0.00 0.00 1.73
4397 5248 5.769835 TCTACTCCCTCCGTCCTAAAATAA 58.230 41.667 0.00 0.00 0.00 1.40
4398 5249 5.393068 TCTACTCCCTCCGTCCTAAAATA 57.607 43.478 0.00 0.00 0.00 1.40
4399 5250 4.261411 TCTACTCCCTCCGTCCTAAAAT 57.739 45.455 0.00 0.00 0.00 1.82
4400 5251 3.744940 TCTACTCCCTCCGTCCTAAAA 57.255 47.619 0.00 0.00 0.00 1.52
4401 5252 3.245371 TGTTCTACTCCCTCCGTCCTAAA 60.245 47.826 0.00 0.00 0.00 1.85
4402 5253 2.309755 TGTTCTACTCCCTCCGTCCTAA 59.690 50.000 0.00 0.00 0.00 2.69
4403 5254 1.918262 TGTTCTACTCCCTCCGTCCTA 59.082 52.381 0.00 0.00 0.00 2.94
4404 5255 0.702902 TGTTCTACTCCCTCCGTCCT 59.297 55.000 0.00 0.00 0.00 3.85
4405 5256 1.777941 ATGTTCTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
4406 5257 3.522553 CAAATGTTCTACTCCCTCCGTC 58.477 50.000 0.00 0.00 0.00 4.79
4407 5258 2.354805 GCAAATGTTCTACTCCCTCCGT 60.355 50.000 0.00 0.00 0.00 4.69
4408 5259 2.280628 GCAAATGTTCTACTCCCTCCG 58.719 52.381 0.00 0.00 0.00 4.63
4409 5260 3.274288 CTGCAAATGTTCTACTCCCTCC 58.726 50.000 0.00 0.00 0.00 4.30
4410 5261 2.680339 GCTGCAAATGTTCTACTCCCTC 59.320 50.000 0.00 0.00 0.00 4.30
4411 5262 2.307098 AGCTGCAAATGTTCTACTCCCT 59.693 45.455 1.02 0.00 0.00 4.20
4412 5263 2.680339 GAGCTGCAAATGTTCTACTCCC 59.320 50.000 1.02 0.00 0.00 4.30
4413 5264 3.604582 AGAGCTGCAAATGTTCTACTCC 58.395 45.455 1.02 0.00 0.00 3.85
4414 5265 5.619625 AAAGAGCTGCAAATGTTCTACTC 57.380 39.130 1.02 0.00 0.00 2.59
4415 5266 7.693969 ATAAAAGAGCTGCAAATGTTCTACT 57.306 32.000 1.02 0.00 0.00 2.57
4475 5346 4.500205 ATGAACTCATGTGTGGCAACAAAG 60.500 41.667 0.00 9.09 41.78 2.77
4644 5517 3.386726 TCAGTTTGGATACCGTATCAGGG 59.613 47.826 18.23 4.03 36.91 4.45
4743 5616 4.482990 AGGGCCTCTGATTTTGAGAAAAA 58.517 39.130 0.00 0.00 33.47 1.94
4824 5697 2.579738 GCTCAGGGACGGGAGAAC 59.420 66.667 0.00 0.00 36.91 3.01
4832 5705 0.034896 TGGTTTCTTCGCTCAGGGAC 59.965 55.000 0.00 0.00 0.00 4.46
4874 5747 3.550656 CGTGGGTCGCTGAACTTC 58.449 61.111 0.00 0.00 0.00 3.01
4941 5814 1.228124 TGTAAACCCAGCAGCGCTT 60.228 52.632 7.50 0.00 36.40 4.68
4956 5829 3.493002 CCAACGTCCTTGGTGTAACTGTA 60.493 47.826 0.00 0.00 44.30 2.74
4957 5830 2.557317 CAACGTCCTTGGTGTAACTGT 58.443 47.619 0.00 0.00 36.74 3.55
4958 5831 1.871039 CCAACGTCCTTGGTGTAACTG 59.129 52.381 0.00 0.00 44.30 3.16
4959 5832 2.249844 CCAACGTCCTTGGTGTAACT 57.750 50.000 0.00 0.00 44.30 2.24
5086 5959 2.792947 TTAGATCCAGGTCGCCGCC 61.793 63.158 0.00 0.00 0.00 6.13
5157 6030 6.147164 CAGTATAACGGTCAAAGCTTTCTTCA 59.853 38.462 9.23 0.00 0.00 3.02
5189 6062 6.674419 AGAAGCCCCTAAATCTTCTCTTCTAA 59.326 38.462 0.00 0.00 41.77 2.10
5375 6264 0.961019 TGTGATTTTCAGTGGCCTGC 59.039 50.000 3.32 0.00 38.66 4.85
5392 6282 5.296780 CCGGTGATCACTAATTTATGCTTGT 59.703 40.000 24.50 0.00 0.00 3.16
5393 6283 5.277974 CCCGGTGATCACTAATTTATGCTTG 60.278 44.000 24.50 0.37 0.00 4.01
5394 6284 4.821805 CCCGGTGATCACTAATTTATGCTT 59.178 41.667 24.50 0.00 0.00 3.91
5395 6285 4.389374 CCCGGTGATCACTAATTTATGCT 58.611 43.478 24.50 0.00 0.00 3.79
5396 6286 3.058224 GCCCGGTGATCACTAATTTATGC 60.058 47.826 24.50 12.28 0.00 3.14
5397 6287 4.133820 TGCCCGGTGATCACTAATTTATG 58.866 43.478 24.50 6.96 0.00 1.90
5398 6288 4.431416 TGCCCGGTGATCACTAATTTAT 57.569 40.909 24.50 0.00 0.00 1.40
5408 6298 0.593128 GTAATGCATGCCCGGTGATC 59.407 55.000 16.68 0.00 0.00 2.92
5445 6335 3.884037 AAAGTGGGACTTCATTCCTGT 57.116 42.857 0.00 0.00 37.47 4.00
5570 7536 4.649267 TGGGAGTGTGTTAATCATTCCA 57.351 40.909 18.96 10.39 41.44 3.53
5584 7550 5.990120 ATCCTTTTCTTTTCATGGGAGTG 57.010 39.130 0.00 0.00 0.00 3.51
5592 7558 6.016276 GGCAGTTCACTATCCTTTTCTTTTCA 60.016 38.462 0.00 0.00 0.00 2.69
5594 7560 5.243954 GGGCAGTTCACTATCCTTTTCTTTT 59.756 40.000 0.00 0.00 0.00 2.27
5644 7610 6.475402 TCACGTCACGTCGAAGTAATATAGTA 59.525 38.462 0.00 0.00 38.32 1.82
5645 7611 5.291858 TCACGTCACGTCGAAGTAATATAGT 59.708 40.000 0.00 0.00 38.32 2.12
5646 7612 5.614781 GTCACGTCACGTCGAAGTAATATAG 59.385 44.000 0.00 0.00 38.32 1.31
5657 7623 0.109643 TTATGGGTCACGTCACGTCG 60.110 55.000 0.00 0.00 38.32 5.12
5690 7658 2.724839 GCTGTGCGAGTTAAACATTCGG 60.725 50.000 0.00 0.00 35.05 4.30
5704 7672 3.202001 CGGGGGTTATGCTGTGCG 61.202 66.667 0.00 0.00 0.00 5.34
5709 7677 1.615424 AGTGGTCGGGGGTTATGCT 60.615 57.895 0.00 0.00 0.00 3.79
5768 7737 6.668645 TGCTTGGTTATTATGGTGTCCTATT 58.331 36.000 0.00 0.00 0.00 1.73
5802 7776 2.283894 TTCTCTGGCAGAGGCGGA 60.284 61.111 36.81 20.21 42.54 5.54
5815 7789 3.177487 GACTAAACGGGTCGATGTTCTC 58.823 50.000 0.00 0.00 0.00 2.87
5855 7829 4.783621 GCATCTGGCGGTGCTGGA 62.784 66.667 11.90 0.00 38.30 3.86
5990 7964 4.400961 AACCAGCTCGCTGAGGCC 62.401 66.667 19.78 0.00 46.30 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.