Multiple sequence alignment - TraesCS2B01G374700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G374700 chr2B 100.000 5639 0 0 1 5639 534838209 534843847 0.000000e+00 10414.0
1 TraesCS2B01G374700 chr2B 94.512 328 16 2 273 599 793399403 793399077 6.520000e-139 505.0
2 TraesCS2B01G374700 chr2B 80.800 375 55 14 1859 2223 65103127 65103494 1.550000e-70 278.0
3 TraesCS2B01G374700 chr2B 81.967 183 26 6 1507 1688 65102780 65102956 1.270000e-31 148.0
4 TraesCS2B01G374700 chr2B 89.041 73 4 1 1773 1841 417500837 417500765 2.800000e-13 87.9
5 TraesCS2B01G374700 chr6B 96.039 1969 68 9 2890 4854 641411001 641409039 0.000000e+00 3195.0
6 TraesCS2B01G374700 chr6B 85.604 1035 90 32 763 1772 641413129 641412129 0.000000e+00 1031.0
7 TraesCS2B01G374700 chr6B 87.536 690 56 21 1883 2559 641412072 641411400 0.000000e+00 771.0
8 TraesCS2B01G374700 chr6B 88.368 576 33 7 5079 5637 641292350 641291792 0.000000e+00 662.0
9 TraesCS2B01G374700 chr6B 95.000 320 14 2 281 599 548176927 548176609 8.430000e-138 501.0
10 TraesCS2B01G374700 chr6B 95.082 122 6 0 596 717 91037988 91037867 5.770000e-45 193.0
11 TraesCS2B01G374700 chr6A 95.554 2002 71 13 2884 4876 571031991 571029999 0.000000e+00 3188.0
12 TraesCS2B01G374700 chr6A 84.889 1039 87 41 760 1762 571034020 571033016 0.000000e+00 985.0
13 TraesCS2B01G374700 chr6A 89.005 573 31 10 5079 5637 570929322 570928768 0.000000e+00 680.0
14 TraesCS2B01G374700 chr6A 87.351 419 30 10 1961 2367 571032956 571032549 5.150000e-125 459.0
15 TraesCS2B01G374700 chr6A 91.667 132 11 0 596 727 601864655 601864524 3.470000e-42 183.0
16 TraesCS2B01G374700 chr6A 90.141 71 5 1 1773 1841 501479290 501479360 2.160000e-14 91.6
17 TraesCS2B01G374700 chr6D 95.427 1968 66 14 2888 4846 426116964 426115012 0.000000e+00 3114.0
18 TraesCS2B01G374700 chr6D 86.049 1025 85 33 760 1762 426119081 426118093 0.000000e+00 1048.0
19 TraesCS2B01G374700 chr6D 77.827 1344 272 19 2902 4227 470903759 470902424 0.000000e+00 808.0
20 TraesCS2B01G374700 chr6D 88.720 656 54 12 1851 2498 426118101 426117458 0.000000e+00 784.0
21 TraesCS2B01G374700 chr6D 87.500 576 29 11 5079 5637 426066407 426065858 4.800000e-175 625.0
22 TraesCS2B01G374700 chr6D 87.683 341 28 8 2555 2887 426117349 426117015 8.860000e-103 385.0
23 TraesCS2B01G374700 chr6D 95.570 158 7 0 125 282 158564472 158564315 2.610000e-63 254.0
24 TraesCS2B01G374700 chr6D 89.706 68 6 1 1775 1841 462210722 462210655 1.010000e-12 86.1
25 TraesCS2B01G374700 chr6D 97.826 46 1 0 5026 5071 426113865 426113820 4.680000e-11 80.5
26 TraesCS2B01G374700 chr6D 86.301 73 9 1 1770 1841 13600151 13600223 1.680000e-10 78.7
27 TraesCS2B01G374700 chr6D 90.196 51 5 0 1798 1848 134695754 134695704 3.650000e-07 67.6
28 TraesCS2B01G374700 chr6D 95.122 41 2 0 1801 1841 32919203 32919243 1.310000e-06 65.8
29 TraesCS2B01G374700 chr6D 95.122 41 2 0 1801 1841 115771441 115771401 1.310000e-06 65.8
30 TraesCS2B01G374700 chr6D 91.667 48 3 1 1800 1847 316232340 316232386 1.310000e-06 65.8
31 TraesCS2B01G374700 chr6D 95.122 41 2 0 1801 1841 406201169 406201129 1.310000e-06 65.8
32 TraesCS2B01G374700 chr6D 92.857 42 3 0 1801 1842 81394234 81394275 1.700000e-05 62.1
33 TraesCS2B01G374700 chr6D 82.857 70 10 2 1772 1841 472540297 472540230 1.700000e-05 62.1
34 TraesCS2B01G374700 chr5B 88.876 2517 178 63 2347 4783 112266823 112264329 0.000000e+00 3003.0
35 TraesCS2B01G374700 chr5B 90.051 1759 147 13 2884 4641 239427362 239425631 0.000000e+00 2254.0
36 TraesCS2B01G374700 chr5B 82.770 946 91 36 760 1701 112268196 112267319 0.000000e+00 778.0
37 TraesCS2B01G374700 chr5B 81.571 700 97 19 914 1612 239437447 239436779 2.970000e-152 549.0
38 TraesCS2B01G374700 chr5B 95.498 311 12 2 277 586 537787812 537787503 3.920000e-136 496.0
39 TraesCS2B01G374700 chr5B 93.769 321 18 2 277 596 592863151 592862832 1.100000e-131 481.0
40 TraesCS2B01G374700 chr5B 85.612 417 47 10 1883 2294 112267248 112266840 5.220000e-115 425.0
41 TraesCS2B01G374700 chr5B 84.677 372 39 11 1887 2246 239436224 239435859 6.950000e-94 355.0
42 TraesCS2B01G374700 chr5B 95.261 211 10 0 1010 1220 660365443 660365653 9.050000e-88 335.0
43 TraesCS2B01G374700 chr5B 95.570 158 7 0 125 282 241326564 241326721 2.610000e-63 254.0
44 TraesCS2B01G374700 chr5D 94.403 1894 97 8 2895 4784 103215138 103213250 0.000000e+00 2902.0
45 TraesCS2B01G374700 chr5D 86.421 1738 230 6 2905 4639 525786566 525788300 0.000000e+00 1897.0
46 TraesCS2B01G374700 chr5D 80.990 768 89 36 941 1701 103216964 103216247 1.770000e-154 556.0
47 TraesCS2B01G374700 chr5D 88.715 319 30 6 1933 2249 103216117 103215803 8.860000e-103 385.0
48 TraesCS2B01G374700 chr5D 95.714 210 9 0 1010 1219 525783330 525783539 7.000000e-89 339.0
49 TraesCS2B01G374700 chr5D 96.203 158 6 0 126 283 410453788 410453945 5.600000e-65 259.0
50 TraesCS2B01G374700 chr5D 95.541 157 7 0 126 282 126455938 126455782 9.380000e-63 252.0
51 TraesCS2B01G374700 chr5D 84.577 201 25 5 2588 2783 103215433 103215234 1.600000e-45 195.0
52 TraesCS2B01G374700 chr5D 95.082 122 6 0 596 717 126455785 126455664 5.770000e-45 193.0
53 TraesCS2B01G374700 chr5D 89.796 147 12 3 2347 2491 103215760 103215615 9.650000e-43 185.0
54 TraesCS2B01G374700 chr5D 86.957 69 7 2 1773 1841 441356408 441356342 6.060000e-10 76.8
55 TraesCS2B01G374700 chr5D 84.615 78 8 2 1773 1846 180468292 180468215 2.180000e-09 75.0
56 TraesCS2B01G374700 chr5A 93.927 1910 103 9 2884 4783 95567256 95569162 0.000000e+00 2872.0
57 TraesCS2B01G374700 chr5A 83.150 908 80 41 797 1701 95565294 95566131 0.000000e+00 761.0
58 TraesCS2B01G374700 chr5A 94.081 321 17 2 279 598 537933357 537933676 2.360000e-133 486.0
59 TraesCS2B01G374700 chr5A 85.885 418 44 12 1883 2294 95566202 95566610 1.120000e-116 431.0
60 TraesCS2B01G374700 chr5A 94.845 97 5 0 2347 2443 95566627 95566723 9.790000e-33 152.0
61 TraesCS2B01G374700 chr4D 88.109 1766 200 5 2884 4642 124261637 124259875 0.000000e+00 2089.0
62 TraesCS2B01G374700 chr4D 82.947 1683 287 0 2905 4587 355860235 355858553 0.000000e+00 1519.0
63 TraesCS2B01G374700 chr4D 81.314 1659 307 3 2905 4562 354136403 354138059 0.000000e+00 1343.0
64 TraesCS2B01G374700 chr4D 74.440 1428 345 16 2900 4317 355283502 355282085 1.050000e-166 597.0
65 TraesCS2B01G374700 chr4D 88.739 222 24 1 1010 1231 354136071 354136291 2.590000e-68 270.0
66 TraesCS2B01G374700 chr4D 95.082 122 6 0 596 717 68019348 68019227 5.770000e-45 193.0
67 TraesCS2B01G374700 chr4D 88.462 130 11 4 2 129 183431604 183431477 2.720000e-33 154.0
68 TraesCS2B01G374700 chr4D 87.500 72 6 1 1773 1841 15786198 15786269 4.680000e-11 80.5
69 TraesCS2B01G374700 chr4D 90.196 51 3 2 1796 1846 34228807 34228759 1.310000e-06 65.8
70 TraesCS2B01G374700 chr4B 87.995 1766 202 8 2884 4642 188194261 188192499 0.000000e+00 2078.0
71 TraesCS2B01G374700 chr4B 82.683 1692 292 1 2897 4587 439322058 439320367 0.000000e+00 1500.0
72 TraesCS2B01G374700 chr4B 81.604 1658 302 3 2906 4562 437949441 437951096 0.000000e+00 1369.0
73 TraesCS2B01G374700 chr4B 94.322 317 16 2 281 596 4691503 4691818 8.490000e-133 484.0
74 TraesCS2B01G374700 chr4B 89.100 211 23 0 1010 1220 437949106 437949316 4.330000e-66 263.0
75 TraesCS2B01G374700 chr4B 86.957 69 7 2 1773 1841 45493400 45493334 6.060000e-10 76.8
76 TraesCS2B01G374700 chr1B 82.980 1745 283 12 2905 4639 512174642 512172902 0.000000e+00 1565.0
77 TraesCS2B01G374700 chr1B 83.673 588 60 23 1923 2491 20677681 20678251 6.470000e-144 521.0
78 TraesCS2B01G374700 chr1B 92.237 219 14 2 998 1216 512175833 512175618 1.970000e-79 307.0
79 TraesCS2B01G374700 chr1B 95.041 121 6 0 597 717 368956239 368956119 2.070000e-44 191.0
80 TraesCS2B01G374700 chr1B 93.023 86 5 1 2354 2438 677990902 677990817 2.130000e-24 124.0
81 TraesCS2B01G374700 chr1A 82.802 1756 285 15 2897 4639 482337742 482335991 0.000000e+00 1554.0
82 TraesCS2B01G374700 chr1A 89.062 128 13 1 2 128 33867899 33868026 2.100000e-34 158.0
83 TraesCS2B01G374700 chr1A 91.176 68 5 1 1773 1839 313907548 313907481 2.160000e-14 91.6
84 TraesCS2B01G374700 chr1A 85.714 70 3 2 1772 1841 109577207 109577145 3.650000e-07 67.6
85 TraesCS2B01G374700 chr1D 82.856 1744 283 14 2907 4639 382236377 382234639 0.000000e+00 1550.0
86 TraesCS2B01G374700 chr1D 88.219 730 66 5 3205 3934 15031448 15032157 0.000000e+00 854.0
87 TraesCS2B01G374700 chr1D 88.214 280 24 3 3081 3353 15031108 15031385 5.450000e-85 326.0
88 TraesCS2B01G374700 chr1D 92.694 219 13 2 998 1216 382237643 382237428 4.240000e-81 313.0
89 TraesCS2B01G374700 chr1D 96.178 157 6 0 126 282 376845900 376845744 2.020000e-64 257.0
90 TraesCS2B01G374700 chr1D 95.652 161 6 1 123 282 493955707 493955867 2.020000e-64 257.0
91 TraesCS2B01G374700 chr1D 95.541 157 7 0 126 282 410536118 410536274 9.380000e-63 252.0
92 TraesCS2B01G374700 chr1D 95.041 121 6 0 597 717 425369595 425369475 2.070000e-44 191.0
93 TraesCS2B01G374700 chr1D 92.982 114 5 1 2328 2438 486866448 486866335 4.520000e-36 163.0
94 TraesCS2B01G374700 chr1D 96.000 100 3 1 2340 2438 486860905 486860806 1.630000e-35 161.0
95 TraesCS2B01G374700 chr1D 89.873 79 5 3 1768 1845 464799800 464799724 1.290000e-16 99.0
96 TraesCS2B01G374700 chr1D 87.179 78 7 1 1767 1841 370323651 370323728 1.010000e-12 86.1
97 TraesCS2B01G374700 chr1D 86.111 72 3 3 1770 1841 48193880 48193816 2.820000e-08 71.3
98 TraesCS2B01G374700 chr1D 82.192 73 11 2 1773 1845 381048742 381048812 1.700000e-05 62.1
99 TraesCS2B01G374700 chr2D 94.750 781 31 8 4230 5008 455306615 455307387 0.000000e+00 1206.0
100 TraesCS2B01G374700 chr2D 92.115 558 17 8 5096 5637 455333519 455334065 0.000000e+00 761.0
101 TraesCS2B01G374700 chr2D 90.141 71 3 1 1771 1841 70029113 70029047 7.780000e-14 89.8
102 TraesCS2B01G374700 chr3A 93.846 325 16 4 273 596 239397 239076 2.360000e-133 486.0
103 TraesCS2B01G374700 chr3A 97.368 152 4 0 128 279 406307313 406307464 5.600000e-65 259.0
104 TraesCS2B01G374700 chr3A 87.037 162 12 9 2321 2478 693460692 693460536 2.090000e-39 174.0
105 TraesCS2B01G374700 chr3A 88.372 129 14 1 2 129 277830510 277830382 2.720000e-33 154.0
106 TraesCS2B01G374700 chr3A 88.372 129 14 1 2 129 277928442 277928314 2.720000e-33 154.0
107 TraesCS2B01G374700 chr3B 94.062 320 17 2 281 599 540615308 540614990 8.490000e-133 484.0
108 TraesCS2B01G374700 chr3B 91.852 135 10 1 596 729 814837423 814837289 2.680000e-43 187.0
109 TraesCS2B01G374700 chr3B 86.014 143 15 4 2339 2478 739982278 739982138 1.270000e-31 148.0
110 TraesCS2B01G374700 chrUn 93.009 329 20 3 277 604 36065345 36065671 1.420000e-130 477.0
111 TraesCS2B01G374700 chrUn 86.111 72 9 1 1770 1841 342888073 342888143 6.060000e-10 76.8
112 TraesCS2B01G374700 chrUn 90.566 53 4 1 1804 1856 197752432 197752381 1.010000e-07 69.4
113 TraesCS2B01G374700 chrUn 93.023 43 2 1 1804 1846 104668845 104668804 1.700000e-05 62.1
114 TraesCS2B01G374700 chrUn 92.857 42 3 0 1801 1842 405825456 405825497 1.700000e-05 62.1
115 TraesCS2B01G374700 chrUn 92.857 42 3 0 1800 1841 461112325 461112284 1.700000e-05 62.1
116 TraesCS2B01G374700 chrUn 92.857 42 3 0 1801 1842 473080412 473080453 1.700000e-05 62.1
117 TraesCS2B01G374700 chrUn 92.683 41 3 0 1801 1841 19086491 19086531 6.100000e-05 60.2
118 TraesCS2B01G374700 chrUn 92.683 41 3 0 1801 1841 31861254 31861294 6.100000e-05 60.2
119 TraesCS2B01G374700 chrUn 92.857 42 2 1 1804 1845 65136729 65136689 6.100000e-05 60.2
120 TraesCS2B01G374700 chr3D 89.787 235 18 6 998 1230 462850046 462850276 4.270000e-76 296.0
121 TraesCS2B01G374700 chr3D 92.019 213 13 4 1019 1230 463192583 463192374 4.270000e-76 296.0
122 TraesCS2B01G374700 chr3D 95.082 122 6 0 596 717 102229966 102230087 5.770000e-45 193.0
123 TraesCS2B01G374700 chr3D 84.516 155 15 8 2328 2478 557704106 557703957 1.640000e-30 145.0
124 TraesCS2B01G374700 chr3D 87.838 74 5 1 1773 1842 110398389 110398462 3.620000e-12 84.2
125 TraesCS2B01G374700 chr7D 96.178 157 6 0 126 282 412853685 412853529 2.020000e-64 257.0
126 TraesCS2B01G374700 chr7D 95.041 121 6 0 597 717 438277023 438276903 2.070000e-44 191.0
127 TraesCS2B01G374700 chr7D 92.000 75 5 1 1772 1846 46702662 46702735 2.780000e-18 104.0
128 TraesCS2B01G374700 chr7D 90.000 70 5 1 1773 1842 236822680 236822613 7.780000e-14 89.8
129 TraesCS2B01G374700 chr7D 88.889 72 5 1 1773 1841 184573430 184573359 1.010000e-12 86.1
130 TraesCS2B01G374700 chr7D 87.500 72 6 1 1773 1841 5307736 5307665 4.680000e-11 80.5
131 TraesCS2B01G374700 chr7A 86.111 108 8 6 2 108 313691979 313691878 5.970000e-20 110.0
132 TraesCS2B01G374700 chr7A 90.000 70 6 1 1773 1841 68881102 68881171 7.780000e-14 89.8
133 TraesCS2B01G374700 chr7B 87.654 81 5 2 1766 1841 419032273 419032193 7.780000e-14 89.8
134 TraesCS2B01G374700 chr7B 87.500 80 6 1 1767 1842 566639154 566639075 7.780000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G374700 chr2B 534838209 534843847 5638 False 10414.000000 10414 100.000000 1 5639 1 chr2B.!!$F1 5638
1 TraesCS2B01G374700 chr2B 65102780 65103494 714 False 213.000000 278 81.383500 1507 2223 2 chr2B.!!$F2 716
2 TraesCS2B01G374700 chr6B 641409039 641413129 4090 True 1665.666667 3195 89.726333 763 4854 3 chr6B.!!$R4 4091
3 TraesCS2B01G374700 chr6B 641291792 641292350 558 True 662.000000 662 88.368000 5079 5637 1 chr6B.!!$R3 558
4 TraesCS2B01G374700 chr6A 571029999 571034020 4021 True 1544.000000 3188 89.264667 760 4876 3 chr6A.!!$R3 4116
5 TraesCS2B01G374700 chr6A 570928768 570929322 554 True 680.000000 680 89.005000 5079 5637 1 chr6A.!!$R1 558
6 TraesCS2B01G374700 chr6D 426113820 426119081 5261 True 1082.300000 3114 91.141000 760 5071 5 chr6D.!!$R9 4311
7 TraesCS2B01G374700 chr6D 470902424 470903759 1335 True 808.000000 808 77.827000 2902 4227 1 chr6D.!!$R7 1325
8 TraesCS2B01G374700 chr6D 426065858 426066407 549 True 625.000000 625 87.500000 5079 5637 1 chr6D.!!$R5 558
9 TraesCS2B01G374700 chr5B 239425631 239427362 1731 True 2254.000000 2254 90.051000 2884 4641 1 chr5B.!!$R1 1757
10 TraesCS2B01G374700 chr5B 112264329 112268196 3867 True 1402.000000 3003 85.752667 760 4783 3 chr5B.!!$R4 4023
11 TraesCS2B01G374700 chr5B 239435859 239437447 1588 True 452.000000 549 83.124000 914 2246 2 chr5B.!!$R5 1332
12 TraesCS2B01G374700 chr5D 525783330 525788300 4970 False 1118.000000 1897 91.067500 1010 4639 2 chr5D.!!$F2 3629
13 TraesCS2B01G374700 chr5D 103213250 103216964 3714 True 844.600000 2902 87.696200 941 4784 5 chr5D.!!$R3 3843
14 TraesCS2B01G374700 chr5A 95565294 95569162 3868 False 1054.000000 2872 89.451750 797 4783 4 chr5A.!!$F2 3986
15 TraesCS2B01G374700 chr4D 124259875 124261637 1762 True 2089.000000 2089 88.109000 2884 4642 1 chr4D.!!$R3 1758
16 TraesCS2B01G374700 chr4D 355858553 355860235 1682 True 1519.000000 1519 82.947000 2905 4587 1 chr4D.!!$R6 1682
17 TraesCS2B01G374700 chr4D 354136071 354138059 1988 False 806.500000 1343 85.026500 1010 4562 2 chr4D.!!$F2 3552
18 TraesCS2B01G374700 chr4D 355282085 355283502 1417 True 597.000000 597 74.440000 2900 4317 1 chr4D.!!$R5 1417
19 TraesCS2B01G374700 chr4B 188192499 188194261 1762 True 2078.000000 2078 87.995000 2884 4642 1 chr4B.!!$R2 1758
20 TraesCS2B01G374700 chr4B 439320367 439322058 1691 True 1500.000000 1500 82.683000 2897 4587 1 chr4B.!!$R3 1690
21 TraesCS2B01G374700 chr4B 437949106 437951096 1990 False 816.000000 1369 85.352000 1010 4562 2 chr4B.!!$F2 3552
22 TraesCS2B01G374700 chr1B 512172902 512175833 2931 True 936.000000 1565 87.608500 998 4639 2 chr1B.!!$R3 3641
23 TraesCS2B01G374700 chr1B 20677681 20678251 570 False 521.000000 521 83.673000 1923 2491 1 chr1B.!!$F1 568
24 TraesCS2B01G374700 chr1A 482335991 482337742 1751 True 1554.000000 1554 82.802000 2897 4639 1 chr1A.!!$R3 1742
25 TraesCS2B01G374700 chr1D 382234639 382237643 3004 True 931.500000 1550 87.775000 998 4639 2 chr1D.!!$R7 3641
26 TraesCS2B01G374700 chr1D 15031108 15032157 1049 False 590.000000 854 88.216500 3081 3934 2 chr1D.!!$F5 853
27 TraesCS2B01G374700 chr2D 455306615 455307387 772 False 1206.000000 1206 94.750000 4230 5008 1 chr2D.!!$F1 778
28 TraesCS2B01G374700 chr2D 455333519 455334065 546 False 761.000000 761 92.115000 5096 5637 1 chr2D.!!$F2 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
391 392 0.037734 GTACTTTGGTGACCCCAGGG 59.962 60.0 0.00 0.0 46.31 4.45 F
392 393 0.104356 TACTTTGGTGACCCCAGGGA 60.104 55.0 7.25 0.0 46.31 4.20 F
855 856 0.251916 CCCTCTTCCGCCACACAATA 59.748 55.0 0.00 0.0 0.00 1.90 F
1791 2263 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.0 0.00 0.0 0.00 2.71 F
2206 3056 0.179156 CAGCAAGCTAAATGTGCCCG 60.179 55.0 3.72 0.0 39.13 6.13 F
2700 6215 0.833287 TGCTGCTCCTAATGACCCTC 59.167 55.0 0.00 0.0 0.00 4.30 F
3099 6703 1.001624 TCAAGATGCGTGAGATTGCG 58.998 50.0 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1772 2244 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.0 0.00 2.59 R
1773 2245 1.229529 ATTGTGGGACGGAGGGAGT 60.230 57.895 0.00 0.0 0.00 3.85 R
2669 6184 0.029300 GAGCAGCAAGTGTCGCAAAA 59.971 50.000 0.00 0.0 0.00 2.44 R
2681 6196 0.833287 GAGGGTCATTAGGAGCAGCA 59.167 55.000 0.00 0.0 45.90 4.41 R
3831 7657 3.336568 ATGGCAGCCTGGACAGCT 61.337 61.111 14.15 0.0 42.70 4.24 R
4614 8455 1.038130 CGACCTCCTCGATCTTGGGT 61.038 60.000 0.00 0.0 46.14 4.51 R
5071 10007 1.340889 GGCCACTGAAAATCACAAGCA 59.659 47.619 0.00 0.0 0.00 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 8.757164 AAAAGAAATTAGATTAAGGCAAACCG 57.243 30.769 0.00 0.00 42.76 4.44
59 60 7.462571 AAGAAATTAGATTAAGGCAAACCGT 57.537 32.000 0.00 0.00 42.76 4.83
60 61 7.462571 AGAAATTAGATTAAGGCAAACCGTT 57.537 32.000 0.00 0.00 42.76 4.44
61 62 8.570068 AGAAATTAGATTAAGGCAAACCGTTA 57.430 30.769 0.00 0.00 42.76 3.18
62 63 8.674607 AGAAATTAGATTAAGGCAAACCGTTAG 58.325 33.333 0.00 0.00 42.76 2.34
63 64 8.570068 AAATTAGATTAAGGCAAACCGTTAGA 57.430 30.769 0.00 0.00 42.76 2.10
64 65 8.747538 AATTAGATTAAGGCAAACCGTTAGAT 57.252 30.769 0.00 0.00 42.76 1.98
65 66 8.747538 ATTAGATTAAGGCAAACCGTTAGATT 57.252 30.769 0.00 0.00 42.76 2.40
66 67 9.841295 ATTAGATTAAGGCAAACCGTTAGATTA 57.159 29.630 0.00 0.00 42.76 1.75
67 68 7.787725 AGATTAAGGCAAACCGTTAGATTAG 57.212 36.000 0.00 0.00 42.76 1.73
68 69 6.766467 AGATTAAGGCAAACCGTTAGATTAGG 59.234 38.462 0.00 0.00 42.76 2.69
69 70 3.994931 AGGCAAACCGTTAGATTAGGT 57.005 42.857 0.00 0.00 42.76 3.08
77 78 5.349061 ACCGTTAGATTAGGTTTAGTGGG 57.651 43.478 0.00 0.00 33.96 4.61
78 79 4.779489 ACCGTTAGATTAGGTTTAGTGGGT 59.221 41.667 0.00 0.00 33.96 4.51
79 80 5.105187 ACCGTTAGATTAGGTTTAGTGGGTC 60.105 44.000 0.00 0.00 33.96 4.46
80 81 5.128335 CCGTTAGATTAGGTTTAGTGGGTCT 59.872 44.000 0.00 0.00 0.00 3.85
81 82 6.322201 CCGTTAGATTAGGTTTAGTGGGTCTA 59.678 42.308 0.00 0.00 0.00 2.59
82 83 7.147846 CCGTTAGATTAGGTTTAGTGGGTCTAA 60.148 40.741 0.00 0.00 36.91 2.10
83 84 8.419442 CGTTAGATTAGGTTTAGTGGGTCTAAT 58.581 37.037 0.00 0.00 38.27 1.73
84 85 9.761504 GTTAGATTAGGTTTAGTGGGTCTAATC 57.238 37.037 11.31 11.31 42.84 1.75
86 87 8.625467 AGATTAGGTTTAGTGGGTCTAATCTT 57.375 34.615 14.48 4.09 46.75 2.40
87 88 9.725206 AGATTAGGTTTAGTGGGTCTAATCTTA 57.275 33.333 14.48 0.00 46.75 2.10
88 89 9.761504 GATTAGGTTTAGTGGGTCTAATCTTAC 57.238 37.037 11.76 0.00 40.99 2.34
89 90 8.669055 TTAGGTTTAGTGGGTCTAATCTTACA 57.331 34.615 0.00 0.00 38.27 2.41
90 91 7.184067 AGGTTTAGTGGGTCTAATCTTACAG 57.816 40.000 0.00 0.00 38.27 2.74
91 92 6.729569 AGGTTTAGTGGGTCTAATCTTACAGT 59.270 38.462 0.00 0.00 38.27 3.55
92 93 6.817140 GGTTTAGTGGGTCTAATCTTACAGTG 59.183 42.308 0.00 0.00 38.27 3.66
93 94 7.310237 GGTTTAGTGGGTCTAATCTTACAGTGA 60.310 40.741 0.00 0.00 38.27 3.41
94 95 7.973048 TTAGTGGGTCTAATCTTACAGTGAT 57.027 36.000 0.00 0.00 34.17 3.06
95 96 9.483489 TTTAGTGGGTCTAATCTTACAGTGATA 57.517 33.333 0.00 0.00 38.27 2.15
96 97 7.973048 AGTGGGTCTAATCTTACAGTGATAA 57.027 36.000 0.00 0.00 0.00 1.75
97 98 8.554490 AGTGGGTCTAATCTTACAGTGATAAT 57.446 34.615 0.00 0.00 0.00 1.28
98 99 9.656323 AGTGGGTCTAATCTTACAGTGATAATA 57.344 33.333 0.00 0.00 0.00 0.98
99 100 9.915629 GTGGGTCTAATCTTACAGTGATAATAG 57.084 37.037 0.00 0.00 0.00 1.73
100 101 9.656323 TGGGTCTAATCTTACAGTGATAATAGT 57.344 33.333 0.00 0.00 0.00 2.12
103 104 9.828852 GTCTAATCTTACAGTGATAATAGTCCG 57.171 37.037 0.00 0.00 0.00 4.79
104 105 9.570468 TCTAATCTTACAGTGATAATAGTCCGT 57.430 33.333 0.00 0.00 0.00 4.69
105 106 9.613957 CTAATCTTACAGTGATAATAGTCCGTG 57.386 37.037 0.00 0.00 0.00 4.94
106 107 7.584122 ATCTTACAGTGATAATAGTCCGTGT 57.416 36.000 0.00 0.00 0.00 4.49
107 108 8.687292 ATCTTACAGTGATAATAGTCCGTGTA 57.313 34.615 0.00 0.00 0.00 2.90
108 109 8.687292 TCTTACAGTGATAATAGTCCGTGTAT 57.313 34.615 0.00 0.00 0.00 2.29
109 110 9.783081 TCTTACAGTGATAATAGTCCGTGTATA 57.217 33.333 0.00 0.00 0.00 1.47
117 118 9.483916 TGATAATAGTCCGTGTATATTTTGTGG 57.516 33.333 0.00 0.00 0.00 4.17
118 119 8.842358 ATAATAGTCCGTGTATATTTTGTGGG 57.158 34.615 0.00 0.00 0.00 4.61
119 120 3.881220 AGTCCGTGTATATTTTGTGGGG 58.119 45.455 0.00 0.00 0.00 4.96
120 121 3.264964 AGTCCGTGTATATTTTGTGGGGT 59.735 43.478 0.00 0.00 0.00 4.95
121 122 3.375922 GTCCGTGTATATTTTGTGGGGTG 59.624 47.826 0.00 0.00 0.00 4.61
122 123 3.009253 TCCGTGTATATTTTGTGGGGTGT 59.991 43.478 0.00 0.00 0.00 4.16
123 124 3.127895 CCGTGTATATTTTGTGGGGTGTG 59.872 47.826 0.00 0.00 0.00 3.82
124 125 3.754323 CGTGTATATTTTGTGGGGTGTGT 59.246 43.478 0.00 0.00 0.00 3.72
125 126 4.216687 CGTGTATATTTTGTGGGGTGTGTT 59.783 41.667 0.00 0.00 0.00 3.32
126 127 5.278561 CGTGTATATTTTGTGGGGTGTGTTT 60.279 40.000 0.00 0.00 0.00 2.83
127 128 6.072618 CGTGTATATTTTGTGGGGTGTGTTTA 60.073 38.462 0.00 0.00 0.00 2.01
128 129 7.309920 GTGTATATTTTGTGGGGTGTGTTTAG 58.690 38.462 0.00 0.00 0.00 1.85
129 130 5.993748 ATATTTTGTGGGGTGTGTTTAGG 57.006 39.130 0.00 0.00 0.00 2.69
130 131 1.404843 TTTGTGGGGTGTGTTTAGGC 58.595 50.000 0.00 0.00 0.00 3.93
131 132 0.553819 TTGTGGGGTGTGTTTAGGCT 59.446 50.000 0.00 0.00 0.00 4.58
132 133 1.436326 TGTGGGGTGTGTTTAGGCTA 58.564 50.000 0.00 0.00 0.00 3.93
133 134 1.349688 TGTGGGGTGTGTTTAGGCTAG 59.650 52.381 0.00 0.00 0.00 3.42
134 135 0.326927 TGGGGTGTGTTTAGGCTAGC 59.673 55.000 6.04 6.04 0.00 3.42
135 136 0.393944 GGGGTGTGTTTAGGCTAGCC 60.394 60.000 27.19 27.19 0.00 3.93
136 137 0.326927 GGGTGTGTTTAGGCTAGCCA 59.673 55.000 34.70 18.26 38.92 4.75
137 138 1.064685 GGGTGTGTTTAGGCTAGCCAT 60.065 52.381 34.70 21.45 38.92 4.40
138 139 2.171870 GGGTGTGTTTAGGCTAGCCATA 59.828 50.000 34.70 20.43 38.92 2.74
139 140 3.467803 GGTGTGTTTAGGCTAGCCATAG 58.532 50.000 34.70 0.00 38.92 2.23
140 141 3.118371 GGTGTGTTTAGGCTAGCCATAGT 60.118 47.826 34.70 17.23 38.92 2.12
141 142 3.871594 GTGTGTTTAGGCTAGCCATAGTG 59.128 47.826 34.70 0.00 38.92 2.74
142 143 3.118408 TGTGTTTAGGCTAGCCATAGTGG 60.118 47.826 34.70 0.00 41.55 4.00
143 144 2.438021 TGTTTAGGCTAGCCATAGTGGG 59.562 50.000 34.70 0.00 38.19 4.61
144 145 1.729586 TTAGGCTAGCCATAGTGGGG 58.270 55.000 34.70 0.00 38.19 4.96
145 146 0.178903 TAGGCTAGCCATAGTGGGGG 60.179 60.000 34.70 0.00 38.19 5.40
146 147 1.770518 GGCTAGCCATAGTGGGGGT 60.771 63.158 29.33 0.00 38.19 4.95
147 148 0.473117 GGCTAGCCATAGTGGGGGTA 60.473 60.000 29.33 0.00 38.19 3.69
148 149 1.430992 GCTAGCCATAGTGGGGGTAA 58.569 55.000 2.29 0.00 37.88 2.85
149 150 1.071857 GCTAGCCATAGTGGGGGTAAC 59.928 57.143 2.29 0.00 37.88 2.50
150 151 2.690840 CTAGCCATAGTGGGGGTAACT 58.309 52.381 0.00 0.00 37.88 2.24
151 152 1.981259 AGCCATAGTGGGGGTAACTT 58.019 50.000 0.00 0.00 38.19 2.66
152 153 3.139606 AGCCATAGTGGGGGTAACTTA 57.860 47.619 0.00 0.00 38.19 2.24
153 154 3.676750 AGCCATAGTGGGGGTAACTTAT 58.323 45.455 0.00 0.00 38.19 1.73
154 155 4.834852 AGCCATAGTGGGGGTAACTTATA 58.165 43.478 0.00 0.00 38.19 0.98
155 156 5.421356 AGCCATAGTGGGGGTAACTTATAT 58.579 41.667 0.00 0.00 38.19 0.86
156 157 6.577310 AGCCATAGTGGGGGTAACTTATATA 58.423 40.000 0.00 0.00 38.19 0.86
157 158 6.672657 AGCCATAGTGGGGGTAACTTATATAG 59.327 42.308 0.00 0.00 38.19 1.31
158 159 6.442885 GCCATAGTGGGGGTAACTTATATAGT 59.557 42.308 0.00 0.00 38.19 2.12
159 160 7.620888 GCCATAGTGGGGGTAACTTATATAGTA 59.379 40.741 0.00 0.00 38.19 1.82
160 161 9.551339 CCATAGTGGGGGTAACTTATATAGTAA 57.449 37.037 0.00 0.00 32.28 2.24
179 180 6.182507 AGTAACTTAACACATCCCAAGACA 57.817 37.500 0.00 0.00 0.00 3.41
180 181 6.597562 AGTAACTTAACACATCCCAAGACAA 58.402 36.000 0.00 0.00 0.00 3.18
181 182 7.231467 AGTAACTTAACACATCCCAAGACAAT 58.769 34.615 0.00 0.00 0.00 2.71
182 183 6.976934 AACTTAACACATCCCAAGACAATT 57.023 33.333 0.00 0.00 0.00 2.32
183 184 6.575162 ACTTAACACATCCCAAGACAATTC 57.425 37.500 0.00 0.00 0.00 2.17
184 185 6.306987 ACTTAACACATCCCAAGACAATTCT 58.693 36.000 0.00 0.00 0.00 2.40
185 186 6.207417 ACTTAACACATCCCAAGACAATTCTG 59.793 38.462 0.00 0.00 29.98 3.02
186 187 2.821969 ACACATCCCAAGACAATTCTGC 59.178 45.455 0.00 0.00 29.98 4.26
187 188 3.087031 CACATCCCAAGACAATTCTGCT 58.913 45.455 0.00 0.00 29.98 4.24
188 189 3.508793 CACATCCCAAGACAATTCTGCTT 59.491 43.478 0.00 0.00 29.98 3.91
189 190 4.701651 CACATCCCAAGACAATTCTGCTTA 59.298 41.667 0.00 0.00 29.98 3.09
190 191 5.359009 CACATCCCAAGACAATTCTGCTTAT 59.641 40.000 0.00 0.00 29.98 1.73
191 192 6.543465 CACATCCCAAGACAATTCTGCTTATA 59.457 38.462 0.00 0.00 29.98 0.98
192 193 7.230108 CACATCCCAAGACAATTCTGCTTATAT 59.770 37.037 0.00 0.00 29.98 0.86
193 194 7.230108 ACATCCCAAGACAATTCTGCTTATATG 59.770 37.037 0.00 0.00 29.98 1.78
194 195 6.064060 TCCCAAGACAATTCTGCTTATATGG 58.936 40.000 0.00 0.00 29.98 2.74
195 196 5.278660 CCCAAGACAATTCTGCTTATATGGC 60.279 44.000 0.00 0.00 29.98 4.40
196 197 5.300034 CCAAGACAATTCTGCTTATATGGCA 59.700 40.000 0.00 0.00 38.10 4.92
197 198 6.183360 CCAAGACAATTCTGCTTATATGGCAA 60.183 38.462 0.00 0.00 39.30 4.52
198 199 6.630444 AGACAATTCTGCTTATATGGCAAG 57.370 37.500 0.00 0.00 39.30 4.01
199 200 6.125029 AGACAATTCTGCTTATATGGCAAGT 58.875 36.000 0.00 0.00 39.30 3.16
200 201 7.282585 AGACAATTCTGCTTATATGGCAAGTA 58.717 34.615 0.00 0.00 39.30 2.24
201 202 7.941238 AGACAATTCTGCTTATATGGCAAGTAT 59.059 33.333 0.00 0.00 39.30 2.12
202 203 8.469309 ACAATTCTGCTTATATGGCAAGTATT 57.531 30.769 0.00 4.63 39.30 1.89
203 204 8.917088 ACAATTCTGCTTATATGGCAAGTATTT 58.083 29.630 0.00 0.00 39.30 1.40
208 209 9.791801 TCTGCTTATATGGCAAGTATTTAATGA 57.208 29.630 0.00 0.00 39.30 2.57
210 211 9.013229 TGCTTATATGGCAAGTATTTAATGAGG 57.987 33.333 0.00 0.00 36.71 3.86
211 212 9.231297 GCTTATATGGCAAGTATTTAATGAGGA 57.769 33.333 0.00 0.00 0.00 3.71
215 216 9.866655 ATATGGCAAGTATTTAATGAGGAAAGA 57.133 29.630 0.00 0.00 0.00 2.52
216 217 7.630242 TGGCAAGTATTTAATGAGGAAAGAG 57.370 36.000 0.00 0.00 0.00 2.85
217 218 7.402054 TGGCAAGTATTTAATGAGGAAAGAGA 58.598 34.615 0.00 0.00 0.00 3.10
218 219 8.055181 TGGCAAGTATTTAATGAGGAAAGAGAT 58.945 33.333 0.00 0.00 0.00 2.75
219 220 8.348507 GGCAAGTATTTAATGAGGAAAGAGATG 58.651 37.037 0.00 0.00 0.00 2.90
220 221 7.859875 GCAAGTATTTAATGAGGAAAGAGATGC 59.140 37.037 0.00 0.00 0.00 3.91
221 222 9.118300 CAAGTATTTAATGAGGAAAGAGATGCT 57.882 33.333 0.00 0.00 0.00 3.79
222 223 9.692325 AAGTATTTAATGAGGAAAGAGATGCTT 57.308 29.630 0.00 0.00 38.88 3.91
223 224 9.118300 AGTATTTAATGAGGAAAGAGATGCTTG 57.882 33.333 0.00 0.00 36.80 4.01
224 225 7.951347 ATTTAATGAGGAAAGAGATGCTTGT 57.049 32.000 0.00 0.00 36.80 3.16
225 226 6.748333 TTAATGAGGAAAGAGATGCTTGTG 57.252 37.500 0.00 0.00 36.80 3.33
226 227 3.063510 TGAGGAAAGAGATGCTTGTGG 57.936 47.619 0.00 0.00 36.80 4.17
227 228 2.373169 TGAGGAAAGAGATGCTTGTGGT 59.627 45.455 0.00 0.00 36.80 4.16
228 229 3.582647 TGAGGAAAGAGATGCTTGTGGTA 59.417 43.478 0.00 0.00 36.80 3.25
229 230 4.041567 TGAGGAAAGAGATGCTTGTGGTAA 59.958 41.667 0.00 0.00 36.80 2.85
230 231 4.327680 AGGAAAGAGATGCTTGTGGTAAC 58.672 43.478 0.00 0.00 36.80 2.50
231 232 4.072131 GGAAAGAGATGCTTGTGGTAACA 58.928 43.478 0.00 0.00 40.32 2.41
232 233 4.702131 GGAAAGAGATGCTTGTGGTAACAT 59.298 41.667 0.00 0.00 42.99 2.71
233 234 5.880332 GGAAAGAGATGCTTGTGGTAACATA 59.120 40.000 0.00 0.00 42.99 2.29
234 235 6.374333 GGAAAGAGATGCTTGTGGTAACATAA 59.626 38.462 0.00 0.00 46.24 1.90
259 260 4.178540 TGTTACTGTAACATAGCGCTTCC 58.821 43.478 25.14 0.00 43.23 3.46
260 261 2.311124 ACTGTAACATAGCGCTTCCC 57.689 50.000 18.68 0.00 0.00 3.97
261 262 1.209128 CTGTAACATAGCGCTTCCCG 58.791 55.000 18.68 4.15 40.75 5.14
262 263 0.818938 TGTAACATAGCGCTTCCCGA 59.181 50.000 18.68 0.00 40.02 5.14
263 264 1.202371 TGTAACATAGCGCTTCCCGAG 60.202 52.381 18.68 1.79 40.02 4.63
264 265 0.387929 TAACATAGCGCTTCCCGAGG 59.612 55.000 18.68 0.00 40.02 4.63
265 266 2.663188 CATAGCGCTTCCCGAGGC 60.663 66.667 18.68 0.00 40.02 4.70
266 267 3.154473 ATAGCGCTTCCCGAGGCA 61.154 61.111 18.68 0.00 40.02 4.75
267 268 2.731571 ATAGCGCTTCCCGAGGCAA 61.732 57.895 18.68 0.00 40.02 4.52
268 269 2.252072 ATAGCGCTTCCCGAGGCAAA 62.252 55.000 18.68 0.00 40.02 3.68
269 270 2.457743 TAGCGCTTCCCGAGGCAAAA 62.458 55.000 18.68 0.00 40.02 2.44
270 271 2.700773 GCGCTTCCCGAGGCAAAAT 61.701 57.895 0.00 0.00 40.02 1.82
271 272 1.137404 CGCTTCCCGAGGCAAAATG 59.863 57.895 0.00 0.00 40.02 2.32
272 273 1.305219 CGCTTCCCGAGGCAAAATGA 61.305 55.000 0.00 0.00 40.02 2.57
273 274 0.453390 GCTTCCCGAGGCAAAATGAG 59.547 55.000 0.00 0.00 33.19 2.90
274 275 1.826385 CTTCCCGAGGCAAAATGAGT 58.174 50.000 0.00 0.00 0.00 3.41
275 276 1.740025 CTTCCCGAGGCAAAATGAGTC 59.260 52.381 0.00 0.00 0.00 3.36
276 277 0.984230 TCCCGAGGCAAAATGAGTCT 59.016 50.000 0.00 0.00 0.00 3.24
277 278 2.184533 TCCCGAGGCAAAATGAGTCTA 58.815 47.619 0.00 0.00 0.00 2.59
278 279 2.771943 TCCCGAGGCAAAATGAGTCTAT 59.228 45.455 0.00 0.00 0.00 1.98
279 280 2.874701 CCCGAGGCAAAATGAGTCTATG 59.125 50.000 0.00 0.00 0.00 2.23
280 281 3.432186 CCCGAGGCAAAATGAGTCTATGA 60.432 47.826 0.00 0.00 0.00 2.15
281 282 3.806521 CCGAGGCAAAATGAGTCTATGAG 59.193 47.826 0.00 0.00 0.00 2.90
282 283 3.806521 CGAGGCAAAATGAGTCTATGAGG 59.193 47.826 0.00 0.00 0.00 3.86
283 284 3.549794 AGGCAAAATGAGTCTATGAGGC 58.450 45.455 0.00 0.00 0.00 4.70
284 285 2.620585 GGCAAAATGAGTCTATGAGGCC 59.379 50.000 0.00 0.00 0.00 5.19
285 286 2.620585 GCAAAATGAGTCTATGAGGCCC 59.379 50.000 0.00 0.00 0.00 5.80
286 287 3.686691 GCAAAATGAGTCTATGAGGCCCT 60.687 47.826 0.00 0.00 0.00 5.19
287 288 4.530875 CAAAATGAGTCTATGAGGCCCTT 58.469 43.478 0.00 0.00 0.00 3.95
288 289 4.429854 AAATGAGTCTATGAGGCCCTTC 57.570 45.455 0.00 0.00 0.00 3.46
289 290 1.794714 TGAGTCTATGAGGCCCTTCC 58.205 55.000 0.00 0.00 0.00 3.46
290 291 1.052617 GAGTCTATGAGGCCCTTCCC 58.947 60.000 0.00 0.00 34.51 3.97
291 292 0.343372 AGTCTATGAGGCCCTTCCCA 59.657 55.000 0.00 0.00 34.51 4.37
292 293 0.761802 GTCTATGAGGCCCTTCCCAG 59.238 60.000 0.00 0.00 34.51 4.45
293 294 0.343372 TCTATGAGGCCCTTCCCAGT 59.657 55.000 0.00 0.00 34.51 4.00
294 295 0.471617 CTATGAGGCCCTTCCCAGTG 59.528 60.000 0.00 0.00 34.51 3.66
295 296 1.635817 TATGAGGCCCTTCCCAGTGC 61.636 60.000 0.00 0.00 34.51 4.40
296 297 3.334054 GAGGCCCTTCCCAGTGCT 61.334 66.667 0.00 0.00 34.51 4.40
297 298 3.334054 AGGCCCTTCCCAGTGCTC 61.334 66.667 0.00 0.00 34.51 4.26
298 299 4.432741 GGCCCTTCCCAGTGCTCC 62.433 72.222 0.00 0.00 0.00 4.70
299 300 3.650950 GCCCTTCCCAGTGCTCCA 61.651 66.667 0.00 0.00 0.00 3.86
300 301 2.352805 CCCTTCCCAGTGCTCCAC 59.647 66.667 0.00 0.00 34.10 4.02
301 302 2.352805 CCTTCCCAGTGCTCCACC 59.647 66.667 0.00 0.00 34.49 4.61
302 303 2.046892 CTTCCCAGTGCTCCACCG 60.047 66.667 0.00 0.00 34.49 4.94
303 304 2.847234 TTCCCAGTGCTCCACCGT 60.847 61.111 0.00 0.00 34.49 4.83
304 305 3.177194 TTCCCAGTGCTCCACCGTG 62.177 63.158 0.00 0.00 34.49 4.94
305 306 4.704833 CCCAGTGCTCCACCGTGG 62.705 72.222 11.73 11.73 39.43 4.94
306 307 3.625897 CCAGTGCTCCACCGTGGA 61.626 66.667 19.39 19.39 45.98 4.02
307 308 2.357517 CAGTGCTCCACCGTGGAC 60.358 66.667 16.73 13.42 42.67 4.02
308 309 2.842462 AGTGCTCCACCGTGGACA 60.842 61.111 16.73 15.68 42.67 4.02
309 310 2.217038 AGTGCTCCACCGTGGACAT 61.217 57.895 16.73 7.43 42.67 3.06
310 311 2.034879 GTGCTCCACCGTGGACATG 61.035 63.158 16.73 8.46 42.67 3.21
311 312 2.347490 GCTCCACCGTGGACATGT 59.653 61.111 16.73 0.00 42.67 3.21
312 313 2.034879 GCTCCACCGTGGACATGTG 61.035 63.158 16.73 7.72 42.67 3.21
313 314 2.031919 TCCACCGTGGACATGTGC 59.968 61.111 16.73 10.90 42.67 4.57
314 315 2.032528 CCACCGTGGACATGTGCT 59.967 61.111 18.75 0.00 40.96 4.40
315 316 1.188871 TCCACCGTGGACATGTGCTA 61.189 55.000 16.73 2.22 42.67 3.49
316 317 0.321210 CCACCGTGGACATGTGCTAA 60.321 55.000 18.75 0.00 40.96 3.09
317 318 1.078709 CACCGTGGACATGTGCTAAG 58.921 55.000 18.75 8.94 0.00 2.18
318 319 0.673644 ACCGTGGACATGTGCTAAGC 60.674 55.000 18.75 5.49 0.00 3.09
319 320 0.673333 CCGTGGACATGTGCTAAGCA 60.673 55.000 18.75 0.00 35.60 3.91
320 321 1.372582 CGTGGACATGTGCTAAGCAT 58.627 50.000 18.75 0.00 41.91 3.79
321 322 1.063027 CGTGGACATGTGCTAAGCATG 59.937 52.381 18.75 2.47 46.51 4.06
322 323 1.097232 TGGACATGTGCTAAGCATGC 58.903 50.000 18.75 10.51 45.40 4.06
323 324 0.383231 GGACATGTGCTAAGCATGCC 59.617 55.000 15.66 0.00 45.40 4.40
324 325 1.097232 GACATGTGCTAAGCATGCCA 58.903 50.000 15.66 4.05 45.40 4.92
325 326 0.813184 ACATGTGCTAAGCATGCCAC 59.187 50.000 15.66 15.50 45.40 5.01
326 327 0.812549 CATGTGCTAAGCATGCCACA 59.187 50.000 23.69 23.69 41.91 4.17
327 328 1.407618 CATGTGCTAAGCATGCCACAT 59.592 47.619 25.42 25.42 41.91 3.21
328 329 2.416680 TGTGCTAAGCATGCCACATA 57.583 45.000 19.50 7.58 41.91 2.29
329 330 2.720915 TGTGCTAAGCATGCCACATAA 58.279 42.857 19.50 2.27 41.91 1.90
330 331 2.684374 TGTGCTAAGCATGCCACATAAG 59.316 45.455 19.50 8.32 41.91 1.73
331 332 1.677576 TGCTAAGCATGCCACATAAGC 59.322 47.619 15.66 14.23 31.71 3.09
332 333 1.677576 GCTAAGCATGCCACATAAGCA 59.322 47.619 15.66 0.00 45.94 3.91
333 334 2.099592 GCTAAGCATGCCACATAAGCAA 59.900 45.455 15.66 0.00 44.83 3.91
334 335 3.429272 GCTAAGCATGCCACATAAGCAAA 60.429 43.478 15.66 0.00 44.83 3.68
335 336 3.681593 AAGCATGCCACATAAGCAAAA 57.318 38.095 15.66 0.00 44.83 2.44
336 337 3.681593 AGCATGCCACATAAGCAAAAA 57.318 38.095 15.66 0.00 44.83 1.94
366 367 2.896685 TGGCACAACATTTAAAGAGGGG 59.103 45.455 0.00 0.00 31.92 4.79
367 368 3.161866 GGCACAACATTTAAAGAGGGGA 58.838 45.455 0.00 0.00 0.00 4.81
368 369 3.193479 GGCACAACATTTAAAGAGGGGAG 59.807 47.826 0.00 0.00 0.00 4.30
369 370 4.079253 GCACAACATTTAAAGAGGGGAGA 58.921 43.478 0.00 0.00 0.00 3.71
370 371 4.156739 GCACAACATTTAAAGAGGGGAGAG 59.843 45.833 0.00 0.00 0.00 3.20
371 372 5.560724 CACAACATTTAAAGAGGGGAGAGA 58.439 41.667 0.00 0.00 0.00 3.10
372 373 5.645497 CACAACATTTAAAGAGGGGAGAGAG 59.355 44.000 0.00 0.00 0.00 3.20
373 374 5.310857 ACAACATTTAAAGAGGGGAGAGAGT 59.689 40.000 0.00 0.00 0.00 3.24
374 375 6.500751 ACAACATTTAAAGAGGGGAGAGAGTA 59.499 38.462 0.00 0.00 0.00 2.59
375 376 6.547930 ACATTTAAAGAGGGGAGAGAGTAC 57.452 41.667 0.00 0.00 0.00 2.73
376 377 6.265304 ACATTTAAAGAGGGGAGAGAGTACT 58.735 40.000 0.00 0.00 0.00 2.73
377 378 6.731448 ACATTTAAAGAGGGGAGAGAGTACTT 59.269 38.462 0.00 0.00 0.00 2.24
378 379 7.237887 ACATTTAAAGAGGGGAGAGAGTACTTT 59.762 37.037 0.00 0.00 0.00 2.66
379 380 6.607004 TTAAAGAGGGGAGAGAGTACTTTG 57.393 41.667 0.00 0.00 0.00 2.77
380 381 3.108847 AGAGGGGAGAGAGTACTTTGG 57.891 52.381 0.00 0.00 0.00 3.28
381 382 2.384029 AGAGGGGAGAGAGTACTTTGGT 59.616 50.000 0.00 0.00 0.00 3.67
382 383 2.498078 GAGGGGAGAGAGTACTTTGGTG 59.502 54.545 0.00 0.00 0.00 4.17
383 384 2.111972 AGGGGAGAGAGTACTTTGGTGA 59.888 50.000 0.00 0.00 0.00 4.02
384 385 2.234168 GGGGAGAGAGTACTTTGGTGAC 59.766 54.545 0.00 0.00 0.00 3.67
385 386 2.234168 GGGAGAGAGTACTTTGGTGACC 59.766 54.545 0.00 0.00 0.00 4.02
386 387 2.234168 GGAGAGAGTACTTTGGTGACCC 59.766 54.545 0.00 0.00 0.00 4.46
387 388 2.234168 GAGAGAGTACTTTGGTGACCCC 59.766 54.545 0.00 0.00 0.00 4.95
388 389 1.975680 GAGAGTACTTTGGTGACCCCA 59.024 52.381 0.00 0.00 43.27 4.96
389 390 1.978580 AGAGTACTTTGGTGACCCCAG 59.021 52.381 0.00 0.00 46.31 4.45
390 391 1.003233 GAGTACTTTGGTGACCCCAGG 59.997 57.143 0.00 0.00 46.31 4.45
391 392 0.037734 GTACTTTGGTGACCCCAGGG 59.962 60.000 0.00 0.00 46.31 4.45
392 393 0.104356 TACTTTGGTGACCCCAGGGA 60.104 55.000 7.25 0.00 46.31 4.20
393 394 1.380302 CTTTGGTGACCCCAGGGAG 59.620 63.158 7.25 0.00 46.31 4.30
394 395 1.073319 TTTGGTGACCCCAGGGAGA 60.073 57.895 7.25 0.00 46.31 3.71
395 396 0.699577 TTTGGTGACCCCAGGGAGAA 60.700 55.000 7.25 0.00 46.31 2.87
396 397 1.423794 TTGGTGACCCCAGGGAGAAC 61.424 60.000 7.25 1.03 46.31 3.01
397 398 2.603652 GGTGACCCCAGGGAGAACC 61.604 68.421 7.25 7.40 38.96 3.62
398 399 1.846124 GTGACCCCAGGGAGAACCA 60.846 63.158 7.25 0.00 43.89 3.67
399 400 1.073319 TGACCCCAGGGAGAACCAA 60.073 57.895 7.25 0.00 43.89 3.67
400 401 1.133809 TGACCCCAGGGAGAACCAAG 61.134 60.000 7.25 0.00 43.89 3.61
401 402 2.356667 CCCCAGGGAGAACCAAGC 59.643 66.667 7.25 0.00 43.89 4.01
402 403 2.356667 CCCAGGGAGAACCAAGCC 59.643 66.667 0.00 0.00 43.89 4.35
403 404 2.538141 CCCAGGGAGAACCAAGCCA 61.538 63.158 0.00 0.00 43.89 4.75
404 405 1.460255 CCAGGGAGAACCAAGCCAA 59.540 57.895 0.00 0.00 43.89 4.52
405 406 0.610232 CCAGGGAGAACCAAGCCAAG 60.610 60.000 0.00 0.00 43.89 3.61
406 407 1.075659 AGGGAGAACCAAGCCAAGC 59.924 57.895 0.00 0.00 43.89 4.01
407 408 2.335712 GGGAGAACCAAGCCAAGCG 61.336 63.158 0.00 0.00 39.85 4.68
408 409 2.563427 GAGAACCAAGCCAAGCGC 59.437 61.111 0.00 0.00 37.98 5.92
409 410 3.314388 GAGAACCAAGCCAAGCGCG 62.314 63.158 0.00 0.00 44.76 6.86
410 411 3.353836 GAACCAAGCCAAGCGCGA 61.354 61.111 12.10 0.00 44.76 5.87
411 412 3.314388 GAACCAAGCCAAGCGCGAG 62.314 63.158 12.10 0.00 44.76 5.03
412 413 3.825160 AACCAAGCCAAGCGCGAGA 62.825 57.895 12.10 0.00 44.76 4.04
413 414 3.049674 CCAAGCCAAGCGCGAGAA 61.050 61.111 12.10 0.00 44.76 2.87
414 415 2.174349 CAAGCCAAGCGCGAGAAC 59.826 61.111 12.10 0.00 44.76 3.01
415 416 3.050275 AAGCCAAGCGCGAGAACC 61.050 61.111 12.10 0.00 44.76 3.62
416 417 3.537206 AAGCCAAGCGCGAGAACCT 62.537 57.895 12.10 0.00 44.76 3.50
417 418 2.125673 GCCAAGCGCGAGAACCTA 60.126 61.111 12.10 0.00 0.00 3.08
418 419 2.167861 GCCAAGCGCGAGAACCTAG 61.168 63.158 12.10 0.00 0.00 3.02
419 420 1.519455 CCAAGCGCGAGAACCTAGG 60.519 63.158 12.10 7.41 0.00 3.02
420 421 2.167861 CAAGCGCGAGAACCTAGGC 61.168 63.158 12.10 0.00 0.00 3.93
421 422 2.646175 AAGCGCGAGAACCTAGGCA 61.646 57.895 12.10 0.00 0.00 4.75
422 423 2.125673 GCGCGAGAACCTAGGCAA 60.126 61.111 12.10 0.00 0.00 4.52
423 424 1.740296 GCGCGAGAACCTAGGCAAA 60.740 57.895 12.10 0.00 0.00 3.68
424 425 1.967597 GCGCGAGAACCTAGGCAAAC 61.968 60.000 12.10 0.00 0.00 2.93
425 426 0.389948 CGCGAGAACCTAGGCAAACT 60.390 55.000 9.30 2.88 0.00 2.66
426 427 1.135199 CGCGAGAACCTAGGCAAACTA 60.135 52.381 9.30 0.00 0.00 2.24
427 428 2.269172 GCGAGAACCTAGGCAAACTAC 58.731 52.381 9.30 0.00 0.00 2.73
428 429 2.094130 GCGAGAACCTAGGCAAACTACT 60.094 50.000 9.30 0.00 0.00 2.57
429 430 3.616802 GCGAGAACCTAGGCAAACTACTT 60.617 47.826 9.30 0.00 0.00 2.24
430 431 4.381292 GCGAGAACCTAGGCAAACTACTTA 60.381 45.833 9.30 0.00 0.00 2.24
431 432 5.717119 CGAGAACCTAGGCAAACTACTTAA 58.283 41.667 9.30 0.00 0.00 1.85
432 433 6.161381 CGAGAACCTAGGCAAACTACTTAAA 58.839 40.000 9.30 0.00 0.00 1.52
433 434 6.817140 CGAGAACCTAGGCAAACTACTTAAAT 59.183 38.462 9.30 0.00 0.00 1.40
434 435 7.201530 CGAGAACCTAGGCAAACTACTTAAATG 60.202 40.741 9.30 0.00 0.00 2.32
435 436 7.686434 AGAACCTAGGCAAACTACTTAAATGA 58.314 34.615 9.30 0.00 0.00 2.57
436 437 8.161425 AGAACCTAGGCAAACTACTTAAATGAA 58.839 33.333 9.30 0.00 0.00 2.57
437 438 8.700439 AACCTAGGCAAACTACTTAAATGAAA 57.300 30.769 9.30 0.00 0.00 2.69
438 439 8.107399 ACCTAGGCAAACTACTTAAATGAAAC 57.893 34.615 9.30 0.00 0.00 2.78
439 440 7.722285 ACCTAGGCAAACTACTTAAATGAAACA 59.278 33.333 9.30 0.00 0.00 2.83
440 441 8.573035 CCTAGGCAAACTACTTAAATGAAACAA 58.427 33.333 0.00 0.00 0.00 2.83
443 444 9.830975 AGGCAAACTACTTAAATGAAACAATTT 57.169 25.926 0.00 0.00 34.24 1.82
444 445 9.862585 GGCAAACTACTTAAATGAAACAATTTG 57.137 29.630 0.00 0.00 32.16 2.32
445 446 9.862585 GCAAACTACTTAAATGAAACAATTTGG 57.137 29.630 0.78 0.00 32.16 3.28
446 447 9.862585 CAAACTACTTAAATGAAACAATTTGGC 57.137 29.630 0.78 0.00 32.16 4.52
447 448 8.601845 AACTACTTAAATGAAACAATTTGGCC 57.398 30.769 0.00 0.00 32.16 5.36
448 449 7.731054 ACTACTTAAATGAAACAATTTGGCCA 58.269 30.769 0.00 0.00 32.16 5.36
449 450 8.207545 ACTACTTAAATGAAACAATTTGGCCAA 58.792 29.630 16.05 16.05 32.16 4.52
450 451 9.218440 CTACTTAAATGAAACAATTTGGCCAAT 57.782 29.630 21.26 2.03 32.16 3.16
451 452 7.873910 ACTTAAATGAAACAATTTGGCCAATG 58.126 30.769 21.26 18.23 32.16 2.82
452 453 4.769859 AATGAAACAATTTGGCCAATGC 57.230 36.364 21.26 2.50 0.00 3.56
453 454 3.204306 TGAAACAATTTGGCCAATGCA 57.796 38.095 21.26 5.70 40.13 3.96
454 455 3.752665 TGAAACAATTTGGCCAATGCAT 58.247 36.364 21.26 7.23 40.13 3.96
455 456 3.502595 TGAAACAATTTGGCCAATGCATG 59.497 39.130 21.26 17.28 40.13 4.06
456 457 3.420300 AACAATTTGGCCAATGCATGA 57.580 38.095 21.26 2.77 40.13 3.07
457 458 3.420300 ACAATTTGGCCAATGCATGAA 57.580 38.095 21.26 1.89 40.13 2.57
458 459 3.752665 ACAATTTGGCCAATGCATGAAA 58.247 36.364 21.26 1.00 40.13 2.69
459 460 3.754323 ACAATTTGGCCAATGCATGAAAG 59.246 39.130 21.26 2.72 40.13 2.62
460 461 3.985019 ATTTGGCCAATGCATGAAAGA 57.015 38.095 21.26 0.00 40.13 2.52
461 462 2.747396 TTGGCCAATGCATGAAAGAC 57.253 45.000 16.05 0.00 40.13 3.01
462 463 1.927487 TGGCCAATGCATGAAAGACT 58.073 45.000 0.61 0.00 40.13 3.24
463 464 2.250031 TGGCCAATGCATGAAAGACTT 58.750 42.857 0.61 0.00 40.13 3.01
464 465 2.633967 TGGCCAATGCATGAAAGACTTT 59.366 40.909 0.61 0.00 40.13 2.66
465 466 3.831333 TGGCCAATGCATGAAAGACTTTA 59.169 39.130 0.61 0.00 40.13 1.85
466 467 4.082081 TGGCCAATGCATGAAAGACTTTAG 60.082 41.667 0.61 0.00 40.13 1.85
467 468 4.158394 GGCCAATGCATGAAAGACTTTAGA 59.842 41.667 0.00 0.00 40.13 2.10
468 469 5.163478 GGCCAATGCATGAAAGACTTTAGAT 60.163 40.000 0.00 0.00 40.13 1.98
469 470 6.039717 GGCCAATGCATGAAAGACTTTAGATA 59.960 38.462 0.00 0.00 40.13 1.98
470 471 6.914757 GCCAATGCATGAAAGACTTTAGATAC 59.085 38.462 0.00 0.00 37.47 2.24
471 472 7.201767 GCCAATGCATGAAAGACTTTAGATACT 60.202 37.037 0.00 0.00 37.47 2.12
472 473 9.330063 CCAATGCATGAAAGACTTTAGATACTA 57.670 33.333 0.00 0.00 0.00 1.82
476 477 9.587772 TGCATGAAAGACTTTAGATACTAACTC 57.412 33.333 0.00 0.00 0.00 3.01
477 478 9.587772 GCATGAAAGACTTTAGATACTAACTCA 57.412 33.333 0.00 0.00 0.00 3.41
498 499 8.335532 ACTCATTAAATAAAGTGTGCTTAGCA 57.664 30.769 1.39 1.39 33.95 3.49
499 500 8.792633 ACTCATTAAATAAAGTGTGCTTAGCAA 58.207 29.630 9.05 0.00 41.47 3.91
500 501 8.964420 TCATTAAATAAAGTGTGCTTAGCAAC 57.036 30.769 9.05 9.74 41.47 4.17
501 502 8.572185 TCATTAAATAAAGTGTGCTTAGCAACA 58.428 29.630 9.05 6.93 41.47 3.33
502 503 9.190858 CATTAAATAAAGTGTGCTTAGCAACAA 57.809 29.630 9.05 0.00 41.47 2.83
503 504 8.568732 TTAAATAAAGTGTGCTTAGCAACAAC 57.431 30.769 9.05 8.13 41.47 3.32
504 505 5.766150 ATAAAGTGTGCTTAGCAACAACA 57.234 34.783 9.05 0.00 41.47 3.33
505 506 4.448537 AAAGTGTGCTTAGCAACAACAA 57.551 36.364 9.05 0.00 41.47 2.83
506 507 3.698029 AGTGTGCTTAGCAACAACAAG 57.302 42.857 9.05 0.00 41.47 3.16
507 508 3.016736 AGTGTGCTTAGCAACAACAAGT 58.983 40.909 9.05 0.00 41.47 3.16
508 509 3.443681 AGTGTGCTTAGCAACAACAAGTT 59.556 39.130 9.05 0.00 41.47 2.66
509 510 4.638421 AGTGTGCTTAGCAACAACAAGTTA 59.362 37.500 9.05 0.00 41.47 2.24
510 511 5.124776 AGTGTGCTTAGCAACAACAAGTTAA 59.875 36.000 9.05 0.00 41.47 2.01
511 512 5.455525 GTGTGCTTAGCAACAACAAGTTAAG 59.544 40.000 9.05 0.00 41.47 1.85
512 513 4.441087 GTGCTTAGCAACAACAAGTTAAGC 59.559 41.667 9.05 12.17 44.16 3.09
513 514 4.606961 GCTTAGCAACAACAAGTTAAGCA 58.393 39.130 13.60 0.00 43.71 3.91
514 515 4.441087 GCTTAGCAACAACAAGTTAAGCAC 59.559 41.667 13.60 0.00 43.71 4.40
515 516 3.436700 AGCAACAACAAGTTAAGCACC 57.563 42.857 0.00 0.00 38.74 5.01
516 517 3.023832 AGCAACAACAAGTTAAGCACCT 58.976 40.909 0.00 0.00 38.74 4.00
517 518 4.204012 AGCAACAACAAGTTAAGCACCTA 58.796 39.130 0.00 0.00 38.74 3.08
518 519 4.827284 AGCAACAACAAGTTAAGCACCTAT 59.173 37.500 0.00 0.00 38.74 2.57
519 520 4.917415 GCAACAACAAGTTAAGCACCTATG 59.083 41.667 0.00 0.00 38.74 2.23
520 521 4.917415 CAACAACAAGTTAAGCACCTATGC 59.083 41.667 0.00 0.00 45.42 3.14
521 522 4.582656 AACAACAAGTTAAGCACCTATGCA 59.417 37.500 1.61 0.00 46.59 3.96
522 523 5.068460 AACAACAAGTTAAGCACCTATGCAA 59.932 36.000 1.61 0.00 46.59 4.08
523 524 6.239289 AACAACAAGTTAAGCACCTATGCAAT 60.239 34.615 1.61 0.00 46.59 3.56
524 525 8.212923 AACAACAAGTTAAGCACCTATGCAATG 61.213 37.037 1.61 0.00 46.59 2.82
533 534 3.877559 CACCTATGCAATGGAGACTTGA 58.122 45.455 14.23 0.00 0.00 3.02
534 535 3.875727 CACCTATGCAATGGAGACTTGAG 59.124 47.826 14.23 0.00 0.00 3.02
535 536 3.521126 ACCTATGCAATGGAGACTTGAGT 59.479 43.478 14.23 0.00 0.00 3.41
536 537 4.018960 ACCTATGCAATGGAGACTTGAGTT 60.019 41.667 14.23 0.00 0.00 3.01
537 538 4.334759 CCTATGCAATGGAGACTTGAGTTG 59.665 45.833 2.51 0.00 0.00 3.16
538 539 1.881973 TGCAATGGAGACTTGAGTTGC 59.118 47.619 0.00 0.00 41.53 4.17
539 540 2.157738 GCAATGGAGACTTGAGTTGCT 58.842 47.619 0.00 0.00 38.97 3.91
540 541 3.244526 TGCAATGGAGACTTGAGTTGCTA 60.245 43.478 8.99 0.00 41.67 3.49
541 542 3.753272 GCAATGGAGACTTGAGTTGCTAA 59.247 43.478 0.00 0.00 38.97 3.09
542 543 4.142730 GCAATGGAGACTTGAGTTGCTAAG 60.143 45.833 0.00 0.00 38.97 2.18
543 544 3.685139 TGGAGACTTGAGTTGCTAAGG 57.315 47.619 0.00 0.00 0.00 2.69
544 545 2.972713 TGGAGACTTGAGTTGCTAAGGT 59.027 45.455 0.00 0.00 0.00 3.50
545 546 4.157246 TGGAGACTTGAGTTGCTAAGGTA 58.843 43.478 0.00 0.00 0.00 3.08
546 547 4.777896 TGGAGACTTGAGTTGCTAAGGTAT 59.222 41.667 0.00 0.00 0.00 2.73
547 548 5.248477 TGGAGACTTGAGTTGCTAAGGTATT 59.752 40.000 0.00 0.00 0.00 1.89
548 549 6.174049 GGAGACTTGAGTTGCTAAGGTATTT 58.826 40.000 0.00 0.00 0.00 1.40
549 550 7.038587 TGGAGACTTGAGTTGCTAAGGTATTTA 60.039 37.037 0.00 0.00 0.00 1.40
550 551 7.822822 GGAGACTTGAGTTGCTAAGGTATTTAA 59.177 37.037 0.00 0.00 0.00 1.52
551 552 9.384764 GAGACTTGAGTTGCTAAGGTATTTAAT 57.615 33.333 0.00 0.00 0.00 1.40
552 553 9.167311 AGACTTGAGTTGCTAAGGTATTTAATG 57.833 33.333 0.00 0.00 0.00 1.90
553 554 7.762382 ACTTGAGTTGCTAAGGTATTTAATGC 58.238 34.615 0.00 0.00 0.00 3.56
554 555 7.393234 ACTTGAGTTGCTAAGGTATTTAATGCA 59.607 33.333 0.00 0.00 0.00 3.96
555 556 7.083875 TGAGTTGCTAAGGTATTTAATGCAC 57.916 36.000 0.00 0.00 0.00 4.57
556 557 6.884295 TGAGTTGCTAAGGTATTTAATGCACT 59.116 34.615 0.00 0.00 0.00 4.40
557 558 7.393234 TGAGTTGCTAAGGTATTTAATGCACTT 59.607 33.333 0.00 0.00 0.00 3.16
558 559 8.801882 AGTTGCTAAGGTATTTAATGCACTTA 57.198 30.769 0.00 1.01 0.00 2.24
559 560 8.893727 AGTTGCTAAGGTATTTAATGCACTTAG 58.106 33.333 17.66 17.66 39.99 2.18
573 574 2.869192 GCACTTAGCACCTCATCTAAGC 59.131 50.000 8.44 0.00 43.27 3.09
574 575 3.679917 GCACTTAGCACCTCATCTAAGCA 60.680 47.826 8.44 0.00 43.27 3.91
575 576 3.868077 CACTTAGCACCTCATCTAAGCAC 59.132 47.826 8.44 0.00 43.27 4.40
576 577 3.118592 ACTTAGCACCTCATCTAAGCACC 60.119 47.826 8.44 0.00 43.27 5.01
577 578 1.577736 AGCACCTCATCTAAGCACCT 58.422 50.000 0.00 0.00 0.00 4.00
578 579 1.912043 AGCACCTCATCTAAGCACCTT 59.088 47.619 0.00 0.00 0.00 3.50
579 580 2.307098 AGCACCTCATCTAAGCACCTTT 59.693 45.455 0.00 0.00 0.00 3.11
580 581 2.421424 GCACCTCATCTAAGCACCTTTG 59.579 50.000 0.00 0.00 0.00 2.77
597 598 4.947645 CCTTTGCATTGAAAAAGGTCTGA 58.052 39.130 17.13 0.00 44.93 3.27
598 599 4.986659 CCTTTGCATTGAAAAAGGTCTGAG 59.013 41.667 17.13 0.00 44.93 3.35
599 600 3.648339 TGCATTGAAAAAGGTCTGAGC 57.352 42.857 0.00 0.00 0.00 4.26
600 601 3.225104 TGCATTGAAAAAGGTCTGAGCT 58.775 40.909 3.02 3.02 0.00 4.09
601 602 4.397420 TGCATTGAAAAAGGTCTGAGCTA 58.603 39.130 10.13 0.00 0.00 3.32
602 603 4.826733 TGCATTGAAAAAGGTCTGAGCTAA 59.173 37.500 10.13 0.63 0.00 3.09
603 604 5.477984 TGCATTGAAAAAGGTCTGAGCTAAT 59.522 36.000 10.13 3.09 0.00 1.73
604 605 6.658816 TGCATTGAAAAAGGTCTGAGCTAATA 59.341 34.615 10.13 0.00 0.00 0.98
605 606 7.176515 TGCATTGAAAAAGGTCTGAGCTAATAA 59.823 33.333 10.13 2.72 0.00 1.40
606 607 8.028938 GCATTGAAAAAGGTCTGAGCTAATAAA 58.971 33.333 10.13 2.62 0.00 1.40
609 610 8.862325 TGAAAAAGGTCTGAGCTAATAAATGA 57.138 30.769 10.13 0.00 0.00 2.57
610 611 9.295825 TGAAAAAGGTCTGAGCTAATAAATGAA 57.704 29.630 10.13 0.00 0.00 2.57
611 612 9.780413 GAAAAAGGTCTGAGCTAATAAATGAAG 57.220 33.333 10.13 0.00 0.00 3.02
612 613 6.934048 AAGGTCTGAGCTAATAAATGAAGC 57.066 37.500 10.13 0.00 36.48 3.86
613 614 5.994250 AGGTCTGAGCTAATAAATGAAGCA 58.006 37.500 7.75 0.00 38.75 3.91
614 615 6.418101 AGGTCTGAGCTAATAAATGAAGCAA 58.582 36.000 7.75 0.00 38.75 3.91
615 616 6.317391 AGGTCTGAGCTAATAAATGAAGCAAC 59.683 38.462 7.75 0.00 38.75 4.17
616 617 6.458888 GGTCTGAGCTAATAAATGAAGCAACC 60.459 42.308 0.00 0.00 38.75 3.77
617 618 6.317391 GTCTGAGCTAATAAATGAAGCAACCT 59.683 38.462 0.00 0.00 38.75 3.50
618 619 7.495934 GTCTGAGCTAATAAATGAAGCAACCTA 59.504 37.037 0.00 0.00 38.75 3.08
619 620 8.213679 TCTGAGCTAATAAATGAAGCAACCTAT 58.786 33.333 0.00 0.00 38.75 2.57
620 621 8.158169 TGAGCTAATAAATGAAGCAACCTATG 57.842 34.615 0.00 0.00 38.75 2.23
621 622 7.992608 TGAGCTAATAAATGAAGCAACCTATGA 59.007 33.333 0.00 0.00 38.75 2.15
622 623 8.930846 AGCTAATAAATGAAGCAACCTATGAT 57.069 30.769 0.00 0.00 38.75 2.45
674 675 9.955102 TGAAGATAGTAACTTAGACTAGTGTCA 57.045 33.333 0.00 0.00 45.20 3.58
680 681 8.521170 AGTAACTTAGACTAGTGTCATATGCA 57.479 34.615 0.00 0.00 45.20 3.96
681 682 9.137459 AGTAACTTAGACTAGTGTCATATGCAT 57.863 33.333 3.79 3.79 45.20 3.96
682 683 9.186323 GTAACTTAGACTAGTGTCATATGCATG 57.814 37.037 10.16 0.00 45.20 4.06
683 684 7.588497 ACTTAGACTAGTGTCATATGCATGA 57.412 36.000 10.16 0.00 45.20 3.07
684 685 8.187913 ACTTAGACTAGTGTCATATGCATGAT 57.812 34.615 10.16 0.00 43.03 2.45
685 686 9.301897 ACTTAGACTAGTGTCATATGCATGATA 57.698 33.333 10.16 0.00 43.03 2.15
703 704 9.021807 TGCATGATACTAGTATAAGTTACTCCC 57.978 37.037 15.42 0.27 0.00 4.30
704 705 8.468399 GCATGATACTAGTATAAGTTACTCCCC 58.532 40.741 15.42 0.00 0.00 4.81
705 706 9.529823 CATGATACTAGTATAAGTTACTCCCCA 57.470 37.037 15.42 5.35 0.00 4.96
706 707 8.930846 TGATACTAGTATAAGTTACTCCCCAC 57.069 38.462 15.42 0.00 0.00 4.61
707 708 8.730948 TGATACTAGTATAAGTTACTCCCCACT 58.269 37.037 15.42 0.00 0.00 4.00
710 711 8.937207 ACTAGTATAAGTTACTCCCCACTATG 57.063 38.462 0.00 0.00 0.00 2.23
711 712 8.730948 ACTAGTATAAGTTACTCCCCACTATGA 58.269 37.037 0.00 0.00 0.00 2.15
712 713 7.836479 AGTATAAGTTACTCCCCACTATGAC 57.164 40.000 0.00 0.00 0.00 3.06
713 714 7.593653 AGTATAAGTTACTCCCCACTATGACT 58.406 38.462 0.00 0.00 0.00 3.41
714 715 8.730948 AGTATAAGTTACTCCCCACTATGACTA 58.269 37.037 0.00 0.00 0.00 2.59
715 716 9.012161 GTATAAGTTACTCCCCACTATGACTAG 57.988 40.741 0.00 0.00 0.00 2.57
716 717 4.216708 AGTTACTCCCCACTATGACTAGC 58.783 47.826 0.00 0.00 0.00 3.42
717 718 1.693627 ACTCCCCACTATGACTAGCG 58.306 55.000 0.00 0.00 0.00 4.26
718 719 0.962489 CTCCCCACTATGACTAGCGG 59.038 60.000 0.00 0.00 0.00 5.52
719 720 0.260816 TCCCCACTATGACTAGCGGT 59.739 55.000 0.00 0.00 0.00 5.68
720 721 1.496001 TCCCCACTATGACTAGCGGTA 59.504 52.381 0.00 0.00 0.00 4.02
721 722 1.887198 CCCCACTATGACTAGCGGTAG 59.113 57.143 19.71 19.71 0.00 3.18
722 723 2.488528 CCCCACTATGACTAGCGGTAGA 60.489 54.545 27.34 7.08 0.00 2.59
723 724 2.814919 CCCACTATGACTAGCGGTAGAG 59.185 54.545 27.34 16.11 0.00 2.43
724 725 3.496337 CCCACTATGACTAGCGGTAGAGA 60.496 52.174 27.34 13.32 0.00 3.10
725 726 4.135306 CCACTATGACTAGCGGTAGAGAA 58.865 47.826 27.34 12.47 0.00 2.87
726 727 4.579340 CCACTATGACTAGCGGTAGAGAAA 59.421 45.833 27.34 10.13 0.00 2.52
727 728 5.241949 CCACTATGACTAGCGGTAGAGAAAT 59.758 44.000 27.34 15.69 0.00 2.17
728 729 6.239064 CCACTATGACTAGCGGTAGAGAAATT 60.239 42.308 27.34 4.21 0.00 1.82
729 730 6.858993 CACTATGACTAGCGGTAGAGAAATTC 59.141 42.308 27.34 13.63 0.00 2.17
730 731 6.773685 ACTATGACTAGCGGTAGAGAAATTCT 59.226 38.462 27.34 0.00 40.06 2.40
731 732 5.916661 TGACTAGCGGTAGAGAAATTCTT 57.083 39.130 27.34 1.90 37.36 2.52
732 733 5.651530 TGACTAGCGGTAGAGAAATTCTTG 58.348 41.667 27.34 0.00 37.36 3.02
733 734 5.185249 TGACTAGCGGTAGAGAAATTCTTGT 59.815 40.000 27.34 1.51 37.36 3.16
734 735 6.038997 ACTAGCGGTAGAGAAATTCTTGTT 57.961 37.500 27.34 0.00 37.36 2.83
735 736 5.869888 ACTAGCGGTAGAGAAATTCTTGTTG 59.130 40.000 27.34 0.00 37.36 3.33
736 737 4.894784 AGCGGTAGAGAAATTCTTGTTGA 58.105 39.130 0.00 0.00 37.36 3.18
737 738 5.491982 AGCGGTAGAGAAATTCTTGTTGAT 58.508 37.500 0.00 0.00 37.36 2.57
738 739 5.582665 AGCGGTAGAGAAATTCTTGTTGATC 59.417 40.000 0.00 0.00 37.36 2.92
739 740 5.582665 GCGGTAGAGAAATTCTTGTTGATCT 59.417 40.000 0.00 0.00 37.36 2.75
740 741 6.092807 GCGGTAGAGAAATTCTTGTTGATCTT 59.907 38.462 0.00 0.00 37.36 2.40
741 742 7.361286 GCGGTAGAGAAATTCTTGTTGATCTTT 60.361 37.037 0.00 0.00 37.36 2.52
742 743 9.151471 CGGTAGAGAAATTCTTGTTGATCTTTA 57.849 33.333 0.00 0.00 37.36 1.85
753 754 9.886132 TTCTTGTTGATCTTTATTAGTACTCCC 57.114 33.333 0.00 0.00 0.00 4.30
754 755 9.268282 TCTTGTTGATCTTTATTAGTACTCCCT 57.732 33.333 0.00 0.00 0.00 4.20
755 756 9.535878 CTTGTTGATCTTTATTAGTACTCCCTC 57.464 37.037 0.00 0.00 0.00 4.30
756 757 8.019656 TGTTGATCTTTATTAGTACTCCCTCC 57.980 38.462 0.00 0.00 0.00 4.30
757 758 7.844779 TGTTGATCTTTATTAGTACTCCCTCCT 59.155 37.037 0.00 0.00 0.00 3.69
758 759 8.706521 GTTGATCTTTATTAGTACTCCCTCCTT 58.293 37.037 0.00 0.00 0.00 3.36
796 797 1.751924 AGATCTGAACGGCTCTACCAC 59.248 52.381 0.00 0.00 39.03 4.16
799 800 1.229082 TGAACGGCTCTACCACCCT 60.229 57.895 0.00 0.00 39.03 4.34
833 834 1.483004 GGAACCTTCTAGAGCTCCACC 59.517 57.143 10.93 0.00 0.00 4.61
849 850 4.785453 CCAGCCCTCTTCCGCCAC 62.785 72.222 0.00 0.00 0.00 5.01
851 852 4.021925 AGCCCTCTTCCGCCACAC 62.022 66.667 0.00 0.00 0.00 3.82
852 853 4.329545 GCCCTCTTCCGCCACACA 62.330 66.667 0.00 0.00 0.00 3.72
855 856 0.251916 CCCTCTTCCGCCACACAATA 59.748 55.000 0.00 0.00 0.00 1.90
899 900 5.360999 CCAATAATCTTCCTCTTCAAACCCC 59.639 44.000 0.00 0.00 0.00 4.95
902 903 2.418669 TCTTCCTCTTCAAACCCCAGT 58.581 47.619 0.00 0.00 0.00 4.00
904 905 1.064825 TCCTCTTCAAACCCCAGTCC 58.935 55.000 0.00 0.00 0.00 3.85
905 906 1.068121 CCTCTTCAAACCCCAGTCCT 58.932 55.000 0.00 0.00 0.00 3.85
908 909 0.321653 CTTCAAACCCCAGTCCTCCG 60.322 60.000 0.00 0.00 0.00 4.63
950 953 4.135153 CGCCACCTCTCCTCACCG 62.135 72.222 0.00 0.00 0.00 4.94
966 1002 0.327259 ACCGGGAAGAAAACCCTAGC 59.673 55.000 6.32 0.00 44.72 3.42
967 1003 0.618981 CCGGGAAGAAAACCCTAGCT 59.381 55.000 0.00 0.00 44.72 3.32
970 1006 2.764572 CGGGAAGAAAACCCTAGCTAGA 59.235 50.000 22.70 0.00 44.72 2.43
971 1007 3.181474 CGGGAAGAAAACCCTAGCTAGAG 60.181 52.174 22.70 11.93 44.72 2.43
972 1008 4.031611 GGGAAGAAAACCCTAGCTAGAGA 58.968 47.826 22.70 0.00 43.65 3.10
973 1009 4.100344 GGGAAGAAAACCCTAGCTAGAGAG 59.900 50.000 22.70 12.38 43.65 3.20
974 1010 7.421464 GGGAAGAAAACCCTAGCTAGAGAGC 62.421 52.000 22.70 6.30 45.26 4.09
989 1025 1.197949 GAGAGCTTCAAAGTTTCCCGC 59.802 52.381 0.00 0.00 0.00 6.13
993 1029 0.667993 CTTCAAAGTTTCCCGCAGCA 59.332 50.000 0.00 0.00 0.00 4.41
1259 1303 4.120792 TCATCACAAGCTCAGATCTGTC 57.879 45.455 21.92 14.65 0.00 3.51
1288 1335 5.666969 TTTCATAAATCGATTAGTGGGCG 57.333 39.130 11.83 0.00 0.00 6.13
1341 1390 7.476667 TCGTATTATTTGCATGGGTTTTAGTG 58.523 34.615 0.00 0.00 0.00 2.74
1344 1397 4.953940 ATTTGCATGGGTTTTAGTGTGT 57.046 36.364 0.00 0.00 0.00 3.72
1349 1402 4.048504 GCATGGGTTTTAGTGTGTTTGAC 58.951 43.478 0.00 0.00 0.00 3.18
1379 1453 1.300233 CCTGGTCGCTTAGATCCGC 60.300 63.158 0.00 0.00 0.00 5.54
1396 1470 1.146637 CGCGGTCGTAGCTATAGAGT 58.853 55.000 3.21 0.00 0.00 3.24
1418 1492 2.483583 TTTGTGCTGGCAACGTTTAG 57.516 45.000 0.00 0.00 42.51 1.85
1419 1493 1.384525 TTGTGCTGGCAACGTTTAGT 58.615 45.000 0.00 0.00 42.51 2.24
1420 1494 1.384525 TGTGCTGGCAACGTTTAGTT 58.615 45.000 0.00 0.00 45.45 2.24
1421 1495 1.332375 TGTGCTGGCAACGTTTAGTTC 59.668 47.619 0.00 0.00 42.02 3.01
1422 1496 0.948678 TGCTGGCAACGTTTAGTTCC 59.051 50.000 0.00 0.00 42.02 3.62
1423 1497 1.235724 GCTGGCAACGTTTAGTTCCT 58.764 50.000 0.00 0.00 42.02 3.36
1424 1498 1.069227 GCTGGCAACGTTTAGTTCCTG 60.069 52.381 0.00 0.92 42.02 3.86
1452 1530 1.497722 GCTGTCGTTAGCTGGTTGC 59.502 57.895 0.00 0.00 40.52 4.17
1481 1559 7.997482 TGAGGTGTCAGATCTGTTAGTATTAC 58.003 38.462 21.92 10.77 0.00 1.89
1482 1560 7.834681 TGAGGTGTCAGATCTGTTAGTATTACT 59.165 37.037 21.92 9.18 0.00 2.24
1483 1561 9.339850 GAGGTGTCAGATCTGTTAGTATTACTA 57.660 37.037 21.92 0.00 0.00 1.82
1527 1608 6.968263 TGGATCTTGTTAATTGTTTGGTCA 57.032 33.333 0.00 0.00 0.00 4.02
1531 1612 5.574082 TCTTGTTAATTGTTTGGTCACACG 58.426 37.500 0.00 0.00 0.00 4.49
1577 1659 4.116961 TCTGGACAGTGAGTTGTTTAACG 58.883 43.478 0.00 0.00 41.71 3.18
1602 1685 1.877637 TTGACATGTGTCTCGGTTGG 58.122 50.000 1.15 0.00 44.99 3.77
1663 2088 3.314553 CTTGATTGCTTTGTCTTGCCAG 58.685 45.455 0.00 0.00 0.00 4.85
1740 2209 9.282247 CTCTTGTTCATGTCAGTTAAATTATGC 57.718 33.333 0.00 0.00 0.00 3.14
1782 2254 9.420551 GTATTGAATTAACTATTACTCCCTCCG 57.579 37.037 0.00 0.00 0.00 4.63
1787 2259 1.572415 ACTATTACTCCCTCCGTCCCA 59.428 52.381 0.00 0.00 0.00 4.37
1790 2262 0.178926 TTACTCCCTCCGTCCCACAA 60.179 55.000 0.00 0.00 0.00 3.33
1791 2263 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
1792 2264 1.221840 CTCCCTCCGTCCCACAATG 59.778 63.158 0.00 0.00 0.00 2.82
1793 2265 1.537889 TCCCTCCGTCCCACAATGT 60.538 57.895 0.00 0.00 0.00 2.71
1795 2267 0.616371 CCCTCCGTCCCACAATGTAA 59.384 55.000 0.00 0.00 0.00 2.41
1798 2270 2.418746 CCTCCGTCCCACAATGTAAGAG 60.419 54.545 0.00 0.00 0.00 2.85
1799 2271 1.066430 TCCGTCCCACAATGTAAGAGC 60.066 52.381 0.00 0.00 0.00 4.09
1802 2274 3.187700 CGTCCCACAATGTAAGAGCTAC 58.812 50.000 0.00 0.00 0.00 3.58
1803 2275 3.119101 CGTCCCACAATGTAAGAGCTACT 60.119 47.826 0.00 0.00 0.00 2.57
1804 2276 4.184629 GTCCCACAATGTAAGAGCTACTG 58.815 47.826 0.00 0.00 0.00 2.74
1805 2277 3.838317 TCCCACAATGTAAGAGCTACTGT 59.162 43.478 0.00 0.00 0.00 3.55
1806 2278 4.081642 TCCCACAATGTAAGAGCTACTGTC 60.082 45.833 0.00 0.00 0.00 3.51
1808 2280 5.237815 CCACAATGTAAGAGCTACTGTCAA 58.762 41.667 0.00 0.00 0.00 3.18
1811 2283 7.255104 CCACAATGTAAGAGCTACTGTCAAAAA 60.255 37.037 0.00 0.00 0.00 1.94
1812 2284 7.587757 CACAATGTAAGAGCTACTGTCAAAAAC 59.412 37.037 0.00 0.00 0.00 2.43
1813 2285 5.900339 TGTAAGAGCTACTGTCAAAAACG 57.100 39.130 0.00 0.00 0.00 3.60
1815 2287 3.113260 AGAGCTACTGTCAAAAACGCT 57.887 42.857 0.00 0.00 0.00 5.07
1816 2288 3.060602 AGAGCTACTGTCAAAAACGCTC 58.939 45.455 0.00 0.00 41.85 5.03
1817 2289 3.060602 GAGCTACTGTCAAAAACGCTCT 58.939 45.455 0.00 0.00 39.30 4.09
1818 2290 3.467803 AGCTACTGTCAAAAACGCTCTT 58.532 40.909 0.00 0.00 0.00 2.85
1819 2291 4.628074 AGCTACTGTCAAAAACGCTCTTA 58.372 39.130 0.00 0.00 0.00 2.10
1820 2292 5.238583 AGCTACTGTCAAAAACGCTCTTAT 58.761 37.500 0.00 0.00 0.00 1.73
1821 2293 6.395629 AGCTACTGTCAAAAACGCTCTTATA 58.604 36.000 0.00 0.00 0.00 0.98
1822 2294 7.042335 AGCTACTGTCAAAAACGCTCTTATAT 58.958 34.615 0.00 0.00 0.00 0.86
1823 2295 7.549488 AGCTACTGTCAAAAACGCTCTTATATT 59.451 33.333 0.00 0.00 0.00 1.28
1824 2296 8.814235 GCTACTGTCAAAAACGCTCTTATATTA 58.186 33.333 0.00 0.00 0.00 0.98
1827 2299 8.612619 ACTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 0.00 2.74
1828 2300 7.925993 TGTCAAAAACGCTCTTATATTATGGG 58.074 34.615 0.00 0.00 0.00 4.00
1829 2301 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
1830 2302 8.068380 GTCAAAAACGCTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 0.00 4.46
1857 2330 6.923670 AGGGAGTATGTTGGAGAGTAGATTA 58.076 40.000 0.00 0.00 0.00 1.75
1870 2343 8.307483 TGGAGAGTAGATTAGAACTGTTCTTTG 58.693 37.037 26.33 0.00 41.14 2.77
1880 2353 9.878599 ATTAGAACTGTTCTTTGTGAAATTACG 57.121 29.630 26.33 0.00 41.14 3.18
1881 2354 7.316544 AGAACTGTTCTTTGTGAAATTACGT 57.683 32.000 17.00 0.00 36.36 3.57
1905 2393 7.486551 CGTCTTAGTTATATGATAGGCTTGCTC 59.513 40.741 0.00 0.00 0.00 4.26
1988 2526 9.677567 TGTGTTGCTTTATCTTTTGAATTAGTC 57.322 29.630 0.00 0.00 0.00 2.59
2015 2554 9.366216 ACTGTTGGTGTTTCTCTTTTATTTTTC 57.634 29.630 0.00 0.00 0.00 2.29
2017 2556 7.489757 TGTTGGTGTTTCTCTTTTATTTTTCGG 59.510 33.333 0.00 0.00 0.00 4.30
2018 2557 7.102847 TGGTGTTTCTCTTTTATTTTTCGGT 57.897 32.000 0.00 0.00 0.00 4.69
2043 2582 6.990939 TCTAGCAGATTGATGATGGAAAGAAG 59.009 38.462 0.00 0.00 0.00 2.85
2065 2654 3.005155 GTCCAAGTGCTTTTCTGCTGAAT 59.995 43.478 6.88 0.00 31.56 2.57
2104 2706 1.754803 GGGCCATTAAGTTTGCTACCC 59.245 52.381 4.39 0.00 0.00 3.69
2206 3056 0.179156 CAGCAAGCTAAATGTGCCCG 60.179 55.000 3.72 0.00 39.13 6.13
2321 3476 7.307337 GCAAATTATCCTTTTGTCTGGTGTTTG 60.307 37.037 0.00 0.00 36.63 2.93
2322 3477 6.976934 ATTATCCTTTTGTCTGGTGTTTGT 57.023 33.333 0.00 0.00 0.00 2.83
2323 3478 6.783708 TTATCCTTTTGTCTGGTGTTTGTT 57.216 33.333 0.00 0.00 0.00 2.83
2324 3479 5.675684 ATCCTTTTGTCTGGTGTTTGTTT 57.324 34.783 0.00 0.00 0.00 2.83
2325 3480 5.066968 TCCTTTTGTCTGGTGTTTGTTTC 57.933 39.130 0.00 0.00 0.00 2.78
2326 3481 4.524714 TCCTTTTGTCTGGTGTTTGTTTCA 59.475 37.500 0.00 0.00 0.00 2.69
2327 3482 5.186797 TCCTTTTGTCTGGTGTTTGTTTCAT 59.813 36.000 0.00 0.00 0.00 2.57
2328 3483 5.874261 CCTTTTGTCTGGTGTTTGTTTCATT 59.126 36.000 0.00 0.00 0.00 2.57
2511 5519 4.263435 TCAATGCTGTGCAATCTGTGATA 58.737 39.130 0.00 0.00 43.62 2.15
2528 5544 5.202765 TGTGATACCCATTTGCTGAATCAT 58.797 37.500 0.00 0.00 0.00 2.45
2539 5555 8.547894 CCATTTGCTGAATCATTGTGATTATTG 58.452 33.333 5.25 1.41 46.20 1.90
2545 5561 8.736742 GCTGAATCATTGTGATTATTGTAAACG 58.263 33.333 5.25 0.00 46.20 3.60
2596 5667 1.617850 TGTTCACCACCAAATGCCATC 59.382 47.619 0.00 0.00 0.00 3.51
2648 6160 3.213206 TCTGTGTCTTGAAACATGGCT 57.787 42.857 0.00 0.00 0.00 4.75
2669 6184 4.292643 CTGAAAATGAGGGGGAATGGAAT 58.707 43.478 0.00 0.00 0.00 3.01
2681 6196 3.306019 GGGAATGGAATTTTGCGACACTT 60.306 43.478 0.00 0.00 36.07 3.16
2696 6211 2.675348 GACACTTGCTGCTCCTAATGAC 59.325 50.000 0.00 0.00 0.00 3.06
2700 6215 0.833287 TGCTGCTCCTAATGACCCTC 59.167 55.000 0.00 0.00 0.00 4.30
2816 6340 6.071391 CCCAGTCCATTTATATATGCAAACCC 60.071 42.308 0.00 0.00 0.00 4.11
2827 6351 1.484038 TGCAAACCCTGTTTTCTGCT 58.516 45.000 0.00 0.00 0.00 4.24
2828 6352 1.136695 TGCAAACCCTGTTTTCTGCTG 59.863 47.619 0.00 0.00 0.00 4.41
2831 6355 3.550842 GCAAACCCTGTTTTCTGCTGTAG 60.551 47.826 0.00 0.00 0.00 2.74
2856 6397 3.754965 TGTCTGCTTTGCCTCAGTTTAT 58.245 40.909 0.00 0.00 0.00 1.40
2857 6398 4.905429 TGTCTGCTTTGCCTCAGTTTATA 58.095 39.130 0.00 0.00 0.00 0.98
2858 6399 5.500234 TGTCTGCTTTGCCTCAGTTTATAT 58.500 37.500 0.00 0.00 0.00 0.86
2859 6400 5.945784 TGTCTGCTTTGCCTCAGTTTATATT 59.054 36.000 0.00 0.00 0.00 1.28
2860 6401 7.109501 TGTCTGCTTTGCCTCAGTTTATATTA 58.890 34.615 0.00 0.00 0.00 0.98
2863 6404 6.795399 TGCTTTGCCTCAGTTTATATTAAGC 58.205 36.000 0.00 0.00 35.93 3.09
3099 6703 1.001624 TCAAGATGCGTGAGATTGCG 58.998 50.000 0.00 0.00 0.00 4.85
3831 7657 4.643795 GCTGTTGCCTATGGAGCA 57.356 55.556 0.00 0.00 38.81 4.26
4614 8455 4.783621 GCATCTGGCGGTGCTGGA 62.784 66.667 11.90 0.00 38.30 3.86
4654 8495 3.177487 GACTAAACGGGTCGATGTTCTC 58.823 50.000 0.00 0.00 0.00 2.87
4667 8508 2.283894 TTCTCTGGCAGAGGCGGA 60.284 61.111 36.81 20.21 42.54 5.54
4701 8551 6.668645 TGCTTGGTTATTATGGTGTCCTATT 58.331 36.000 0.00 0.00 0.00 1.73
4779 8636 2.724839 GCTGTGCGAGTTAAACATTCGG 60.725 50.000 0.00 0.00 35.05 4.30
4812 8671 0.109643 TTATGGGTCACGTCACGTCG 60.110 55.000 0.00 0.00 38.32 5.12
4877 8737 6.016276 GGCAGTTCACTATCCTTTTCTTTTCA 60.016 38.462 0.00 0.00 0.00 2.69
4885 8745 5.990120 ATCCTTTTCTTTTCATGGGAGTG 57.010 39.130 0.00 0.00 0.00 3.51
4899 8759 4.649267 TGGGAGTGTGTTAATCATTCCA 57.351 40.909 18.96 10.39 41.44 3.53
5023 9613 4.641989 CCATAAAGTGGGACTTCATTCCTG 59.358 45.833 0.00 0.00 44.79 3.86
5024 9614 3.884037 AAAGTGGGACTTCATTCCTGT 57.116 42.857 0.00 0.00 37.47 4.00
5061 9997 0.593128 GTAATGCATGCCCGGTGATC 59.407 55.000 16.68 0.00 0.00 2.92
5071 10007 4.431416 TGCCCGGTGATCACTAATTTAT 57.569 40.909 24.50 0.00 0.00 1.40
5072 10008 4.133820 TGCCCGGTGATCACTAATTTATG 58.866 43.478 24.50 6.96 0.00 1.90
5073 10009 3.058224 GCCCGGTGATCACTAATTTATGC 60.058 47.826 24.50 12.28 0.00 3.14
5074 10010 4.389374 CCCGGTGATCACTAATTTATGCT 58.611 43.478 24.50 0.00 0.00 3.79
5075 10011 4.821805 CCCGGTGATCACTAATTTATGCTT 59.178 41.667 24.50 0.00 0.00 3.91
5076 10012 5.277974 CCCGGTGATCACTAATTTATGCTTG 60.278 44.000 24.50 0.37 0.00 4.01
5077 10013 5.296780 CCGGTGATCACTAATTTATGCTTGT 59.703 40.000 24.50 0.00 0.00 3.16
5093 10029 2.608752 GCTTGTGATTTTCAGTGGCCTG 60.609 50.000 3.32 0.00 40.25 4.85
5094 10030 0.961019 TGTGATTTTCAGTGGCCTGC 59.039 50.000 3.32 0.00 38.66 4.85
5280 10233 6.674419 AGAAGCCCCTAAATCTTCTCTTCTAA 59.326 38.462 0.00 0.00 41.77 2.10
5312 10265 6.147164 CAGTATAACGGTCAAAGCTTTCTTCA 59.853 38.462 9.23 0.00 0.00 3.02
5382 10335 1.591863 GTTAGATCCAGGTCGCCGC 60.592 63.158 0.00 0.00 0.00 6.53
5383 10336 2.792947 TTAGATCCAGGTCGCCGCC 61.793 63.158 0.00 0.00 0.00 6.13
5392 10345 4.520846 GTCGCCGCCGCTTGAATG 62.521 66.667 0.00 0.00 0.00 2.67
5510 10469 2.249844 CCAACGTCCTTGGTGTAACT 57.750 50.000 0.00 0.00 44.30 2.24
5511 10470 1.871039 CCAACGTCCTTGGTGTAACTG 59.129 52.381 0.00 0.00 44.30 3.16
5512 10471 2.557317 CAACGTCCTTGGTGTAACTGT 58.443 47.619 0.00 0.00 36.74 3.55
5513 10472 3.493002 CCAACGTCCTTGGTGTAACTGTA 60.493 47.826 0.00 0.00 44.30 2.74
5514 10473 4.121317 CAACGTCCTTGGTGTAACTGTAA 58.879 43.478 0.00 0.00 36.74 2.41
5528 10487 1.228124 TGTAAACCCAGCAGCGCTT 60.228 52.632 7.50 0.00 36.40 4.68
5595 10554 3.550656 CGTGGGTCGCTGAACTTC 58.449 61.111 0.00 0.00 0.00 3.01
5637 10596 0.034896 TGGTTTCTTCGCTCAGGGAC 59.965 55.000 0.00 0.00 0.00 4.46
5638 10597 1.014564 GGTTTCTTCGCTCAGGGACG 61.015 60.000 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 9.203421 CGGTTTGCCTTAATCTAATTTCTTTTT 57.797 29.630 0.00 0.00 0.00 1.94
33 34 8.364894 ACGGTTTGCCTTAATCTAATTTCTTTT 58.635 29.630 0.00 0.00 0.00 2.27
34 35 7.892609 ACGGTTTGCCTTAATCTAATTTCTTT 58.107 30.769 0.00 0.00 0.00 2.52
35 36 7.462571 ACGGTTTGCCTTAATCTAATTTCTT 57.537 32.000 0.00 0.00 0.00 2.52
36 37 7.462571 AACGGTTTGCCTTAATCTAATTTCT 57.537 32.000 0.00 0.00 0.00 2.52
37 38 8.671028 TCTAACGGTTTGCCTTAATCTAATTTC 58.329 33.333 0.00 0.00 0.00 2.17
38 39 8.570068 TCTAACGGTTTGCCTTAATCTAATTT 57.430 30.769 0.00 0.00 0.00 1.82
39 40 8.747538 ATCTAACGGTTTGCCTTAATCTAATT 57.252 30.769 0.00 0.00 0.00 1.40
40 41 8.747538 AATCTAACGGTTTGCCTTAATCTAAT 57.252 30.769 0.00 0.00 0.00 1.73
41 42 9.321562 CTAATCTAACGGTTTGCCTTAATCTAA 57.678 33.333 0.00 0.00 0.00 2.10
42 43 7.929785 CCTAATCTAACGGTTTGCCTTAATCTA 59.070 37.037 0.00 0.00 0.00 1.98
43 44 6.766467 CCTAATCTAACGGTTTGCCTTAATCT 59.234 38.462 0.00 0.00 0.00 2.40
44 45 6.541278 ACCTAATCTAACGGTTTGCCTTAATC 59.459 38.462 0.00 0.00 0.00 1.75
45 46 6.420638 ACCTAATCTAACGGTTTGCCTTAAT 58.579 36.000 0.00 0.00 0.00 1.40
46 47 5.807909 ACCTAATCTAACGGTTTGCCTTAA 58.192 37.500 0.00 0.00 0.00 1.85
47 48 5.425196 ACCTAATCTAACGGTTTGCCTTA 57.575 39.130 0.00 0.00 0.00 2.69
48 49 4.296621 ACCTAATCTAACGGTTTGCCTT 57.703 40.909 0.00 0.00 0.00 4.35
49 50 3.994931 ACCTAATCTAACGGTTTGCCT 57.005 42.857 0.00 0.00 0.00 4.75
54 55 5.249163 ACCCACTAAACCTAATCTAACGGTT 59.751 40.000 0.00 0.00 42.52 4.44
55 56 4.779489 ACCCACTAAACCTAATCTAACGGT 59.221 41.667 0.00 0.00 0.00 4.83
56 57 5.128335 AGACCCACTAAACCTAATCTAACGG 59.872 44.000 0.00 0.00 0.00 4.44
57 58 6.218108 AGACCCACTAAACCTAATCTAACG 57.782 41.667 0.00 0.00 0.00 3.18
58 59 9.761504 GATTAGACCCACTAAACCTAATCTAAC 57.238 37.037 0.00 0.00 43.15 2.34
59 60 9.725206 AGATTAGACCCACTAAACCTAATCTAA 57.275 33.333 16.67 0.00 46.68 2.10
62 63 9.761504 GTAAGATTAGACCCACTAAACCTAATC 57.238 37.037 0.00 0.00 43.15 1.75
63 64 9.275572 TGTAAGATTAGACCCACTAAACCTAAT 57.724 33.333 0.00 0.00 43.15 1.73
64 65 8.669055 TGTAAGATTAGACCCACTAAACCTAA 57.331 34.615 0.00 0.00 43.15 2.69
65 66 7.897565 ACTGTAAGATTAGACCCACTAAACCTA 59.102 37.037 0.00 0.00 39.98 3.08
66 67 6.729569 ACTGTAAGATTAGACCCACTAAACCT 59.270 38.462 0.00 0.00 39.98 3.50
67 68 6.817140 CACTGTAAGATTAGACCCACTAAACC 59.183 42.308 0.00 0.00 39.98 3.27
68 69 7.609056 TCACTGTAAGATTAGACCCACTAAAC 58.391 38.462 0.00 0.00 39.98 2.01
69 70 7.786046 TCACTGTAAGATTAGACCCACTAAA 57.214 36.000 0.00 0.00 39.98 1.85
70 71 7.973048 ATCACTGTAAGATTAGACCCACTAA 57.027 36.000 0.00 0.00 40.48 2.24
71 72 9.656323 ATTATCACTGTAAGATTAGACCCACTA 57.344 33.333 0.00 0.00 37.43 2.74
72 73 7.973048 TTATCACTGTAAGATTAGACCCACT 57.027 36.000 0.00 0.00 37.43 4.00
73 74 9.915629 CTATTATCACTGTAAGATTAGACCCAC 57.084 37.037 0.00 0.00 37.43 4.61
74 75 9.656323 ACTATTATCACTGTAAGATTAGACCCA 57.344 33.333 0.00 0.00 37.43 4.51
77 78 9.828852 CGGACTATTATCACTGTAAGATTAGAC 57.171 37.037 0.00 0.00 37.43 2.59
78 79 9.570468 ACGGACTATTATCACTGTAAGATTAGA 57.430 33.333 0.00 0.00 37.43 2.10
79 80 9.613957 CACGGACTATTATCACTGTAAGATTAG 57.386 37.037 0.00 0.00 37.43 1.73
80 81 9.128404 ACACGGACTATTATCACTGTAAGATTA 57.872 33.333 0.00 0.00 37.43 1.75
81 82 8.008513 ACACGGACTATTATCACTGTAAGATT 57.991 34.615 0.00 0.00 37.43 2.40
82 83 7.584122 ACACGGACTATTATCACTGTAAGAT 57.416 36.000 0.00 0.00 37.43 2.40
83 84 8.687292 ATACACGGACTATTATCACTGTAAGA 57.313 34.615 0.00 0.00 37.43 2.10
91 92 9.483916 CCACAAAATATACACGGACTATTATCA 57.516 33.333 0.00 0.00 0.00 2.15
92 93 8.932791 CCCACAAAATATACACGGACTATTATC 58.067 37.037 0.00 0.00 0.00 1.75
93 94 7.881232 CCCCACAAAATATACACGGACTATTAT 59.119 37.037 0.00 0.00 0.00 1.28
94 95 7.147514 ACCCCACAAAATATACACGGACTATTA 60.148 37.037 0.00 0.00 0.00 0.98
95 96 6.059484 CCCCACAAAATATACACGGACTATT 58.941 40.000 0.00 0.00 0.00 1.73
96 97 5.131475 ACCCCACAAAATATACACGGACTAT 59.869 40.000 0.00 0.00 0.00 2.12
97 98 4.470664 ACCCCACAAAATATACACGGACTA 59.529 41.667 0.00 0.00 0.00 2.59
98 99 3.264964 ACCCCACAAAATATACACGGACT 59.735 43.478 0.00 0.00 0.00 3.85
99 100 3.375922 CACCCCACAAAATATACACGGAC 59.624 47.826 0.00 0.00 0.00 4.79
100 101 3.009253 ACACCCCACAAAATATACACGGA 59.991 43.478 0.00 0.00 0.00 4.69
101 102 3.127895 CACACCCCACAAAATATACACGG 59.872 47.826 0.00 0.00 0.00 4.94
102 103 3.754323 ACACACCCCACAAAATATACACG 59.246 43.478 0.00 0.00 0.00 4.49
103 104 5.715434 AACACACCCCACAAAATATACAC 57.285 39.130 0.00 0.00 0.00 2.90
104 105 6.434652 CCTAAACACACCCCACAAAATATACA 59.565 38.462 0.00 0.00 0.00 2.29
105 106 6.626402 GCCTAAACACACCCCACAAAATATAC 60.626 42.308 0.00 0.00 0.00 1.47
106 107 5.419471 GCCTAAACACACCCCACAAAATATA 59.581 40.000 0.00 0.00 0.00 0.86
107 108 4.221924 GCCTAAACACACCCCACAAAATAT 59.778 41.667 0.00 0.00 0.00 1.28
108 109 3.574826 GCCTAAACACACCCCACAAAATA 59.425 43.478 0.00 0.00 0.00 1.40
109 110 2.367241 GCCTAAACACACCCCACAAAAT 59.633 45.455 0.00 0.00 0.00 1.82
110 111 1.757699 GCCTAAACACACCCCACAAAA 59.242 47.619 0.00 0.00 0.00 2.44
111 112 1.063567 AGCCTAAACACACCCCACAAA 60.064 47.619 0.00 0.00 0.00 2.83
112 113 0.553819 AGCCTAAACACACCCCACAA 59.446 50.000 0.00 0.00 0.00 3.33
113 114 1.349688 CTAGCCTAAACACACCCCACA 59.650 52.381 0.00 0.00 0.00 4.17
114 115 1.949079 GCTAGCCTAAACACACCCCAC 60.949 57.143 2.29 0.00 0.00 4.61
115 116 0.326927 GCTAGCCTAAACACACCCCA 59.673 55.000 2.29 0.00 0.00 4.96
116 117 0.393944 GGCTAGCCTAAACACACCCC 60.394 60.000 27.17 0.00 0.00 4.95
117 118 0.326927 TGGCTAGCCTAAACACACCC 59.673 55.000 33.07 3.78 36.94 4.61
118 119 2.420058 ATGGCTAGCCTAAACACACC 57.580 50.000 33.07 4.32 36.94 4.16
119 120 3.871594 CACTATGGCTAGCCTAAACACAC 59.128 47.826 33.07 5.09 36.94 3.82
120 121 3.118408 CCACTATGGCTAGCCTAAACACA 60.118 47.826 33.07 12.80 36.94 3.72
121 122 3.467803 CCACTATGGCTAGCCTAAACAC 58.532 50.000 33.07 6.63 36.94 3.32
122 123 2.438021 CCCACTATGGCTAGCCTAAACA 59.562 50.000 33.07 14.38 35.79 2.83
123 124 2.224548 CCCCACTATGGCTAGCCTAAAC 60.225 54.545 33.07 8.17 35.79 2.01
124 125 2.054799 CCCCACTATGGCTAGCCTAAA 58.945 52.381 33.07 15.18 35.79 1.85
125 126 1.729586 CCCCACTATGGCTAGCCTAA 58.270 55.000 33.07 20.02 35.79 2.69
126 127 0.178903 CCCCCACTATGGCTAGCCTA 60.179 60.000 33.07 20.21 35.79 3.93
127 128 1.462238 CCCCCACTATGGCTAGCCT 60.462 63.158 33.07 20.80 35.79 4.58
128 129 0.473117 TACCCCCACTATGGCTAGCC 60.473 60.000 27.71 27.71 35.79 3.93
129 130 1.071857 GTTACCCCCACTATGGCTAGC 59.928 57.143 6.04 6.04 35.79 3.42
130 131 2.690840 AGTTACCCCCACTATGGCTAG 58.309 52.381 0.00 0.00 35.79 3.42
131 132 2.881266 AGTTACCCCCACTATGGCTA 57.119 50.000 0.00 0.00 35.79 3.93
132 133 1.981259 AAGTTACCCCCACTATGGCT 58.019 50.000 0.00 0.00 35.79 4.75
133 134 5.774102 ATATAAGTTACCCCCACTATGGC 57.226 43.478 0.00 0.00 35.79 4.40
134 135 9.551339 TTACTATATAAGTTACCCCCACTATGG 57.449 37.037 0.00 0.00 39.80 2.74
153 154 9.038072 TGTCTTGGGATGTGTTAAGTTACTATA 57.962 33.333 0.00 0.00 0.00 1.31
154 155 7.913789 TGTCTTGGGATGTGTTAAGTTACTAT 58.086 34.615 0.00 0.00 0.00 2.12
155 156 7.305813 TGTCTTGGGATGTGTTAAGTTACTA 57.694 36.000 0.00 0.00 0.00 1.82
156 157 6.182507 TGTCTTGGGATGTGTTAAGTTACT 57.817 37.500 0.00 0.00 0.00 2.24
157 158 6.870971 TTGTCTTGGGATGTGTTAAGTTAC 57.129 37.500 0.00 0.00 0.00 2.50
158 159 7.942341 AGAATTGTCTTGGGATGTGTTAAGTTA 59.058 33.333 0.00 0.00 0.00 2.24
159 160 6.777580 AGAATTGTCTTGGGATGTGTTAAGTT 59.222 34.615 0.00 0.00 0.00 2.66
160 161 6.207417 CAGAATTGTCTTGGGATGTGTTAAGT 59.793 38.462 0.00 0.00 28.78 2.24
161 162 6.615088 CAGAATTGTCTTGGGATGTGTTAAG 58.385 40.000 0.00 0.00 28.78 1.85
162 163 5.048083 GCAGAATTGTCTTGGGATGTGTTAA 60.048 40.000 0.00 0.00 28.78 2.01
163 164 4.458989 GCAGAATTGTCTTGGGATGTGTTA 59.541 41.667 0.00 0.00 28.78 2.41
164 165 3.256631 GCAGAATTGTCTTGGGATGTGTT 59.743 43.478 0.00 0.00 28.78 3.32
165 166 2.821969 GCAGAATTGTCTTGGGATGTGT 59.178 45.455 0.00 0.00 28.78 3.72
166 167 3.087031 AGCAGAATTGTCTTGGGATGTG 58.913 45.455 0.00 0.00 28.78 3.21
167 168 3.446442 AGCAGAATTGTCTTGGGATGT 57.554 42.857 0.00 0.00 28.78 3.06
168 169 7.309012 CCATATAAGCAGAATTGTCTTGGGATG 60.309 40.741 0.00 0.00 28.78 3.51
169 170 6.718454 CCATATAAGCAGAATTGTCTTGGGAT 59.282 38.462 0.00 0.00 28.78 3.85
170 171 6.064060 CCATATAAGCAGAATTGTCTTGGGA 58.936 40.000 0.00 0.00 28.78 4.37
171 172 5.278660 GCCATATAAGCAGAATTGTCTTGGG 60.279 44.000 0.00 0.00 28.78 4.12
172 173 5.300034 TGCCATATAAGCAGAATTGTCTTGG 59.700 40.000 0.00 0.00 34.69 3.61
173 174 6.381481 TGCCATATAAGCAGAATTGTCTTG 57.619 37.500 0.00 0.00 34.69 3.02
174 175 6.604795 ACTTGCCATATAAGCAGAATTGTCTT 59.395 34.615 1.60 0.00 42.17 3.01
175 176 6.125029 ACTTGCCATATAAGCAGAATTGTCT 58.875 36.000 1.60 0.00 42.17 3.41
176 177 6.382869 ACTTGCCATATAAGCAGAATTGTC 57.617 37.500 1.60 0.00 42.17 3.18
177 178 8.469309 AATACTTGCCATATAAGCAGAATTGT 57.531 30.769 1.60 0.00 42.17 2.71
182 183 9.791801 TCATTAAATACTTGCCATATAAGCAGA 57.208 29.630 1.60 0.00 42.17 4.26
184 185 9.013229 CCTCATTAAATACTTGCCATATAAGCA 57.987 33.333 0.00 0.00 38.81 3.91
185 186 9.231297 TCCTCATTAAATACTTGCCATATAAGC 57.769 33.333 0.00 0.00 0.00 3.09
189 190 9.866655 TCTTTCCTCATTAAATACTTGCCATAT 57.133 29.630 0.00 0.00 0.00 1.78
190 191 9.342308 CTCTTTCCTCATTAAATACTTGCCATA 57.658 33.333 0.00 0.00 0.00 2.74
191 192 8.055181 TCTCTTTCCTCATTAAATACTTGCCAT 58.945 33.333 0.00 0.00 0.00 4.40
192 193 7.402054 TCTCTTTCCTCATTAAATACTTGCCA 58.598 34.615 0.00 0.00 0.00 4.92
193 194 7.865706 TCTCTTTCCTCATTAAATACTTGCC 57.134 36.000 0.00 0.00 0.00 4.52
194 195 7.859875 GCATCTCTTTCCTCATTAAATACTTGC 59.140 37.037 0.00 0.00 0.00 4.01
195 196 9.118300 AGCATCTCTTTCCTCATTAAATACTTG 57.882 33.333 0.00 0.00 0.00 3.16
196 197 9.692325 AAGCATCTCTTTCCTCATTAAATACTT 57.308 29.630 0.00 0.00 0.00 2.24
197 198 9.118300 CAAGCATCTCTTTCCTCATTAAATACT 57.882 33.333 0.00 0.00 31.27 2.12
198 199 8.897752 ACAAGCATCTCTTTCCTCATTAAATAC 58.102 33.333 0.00 0.00 31.27 1.89
199 200 8.896744 CACAAGCATCTCTTTCCTCATTAAATA 58.103 33.333 0.00 0.00 31.27 1.40
200 201 7.147949 CCACAAGCATCTCTTTCCTCATTAAAT 60.148 37.037 0.00 0.00 31.27 1.40
201 202 6.151648 CCACAAGCATCTCTTTCCTCATTAAA 59.848 38.462 0.00 0.00 31.27 1.52
202 203 5.649395 CCACAAGCATCTCTTTCCTCATTAA 59.351 40.000 0.00 0.00 31.27 1.40
203 204 5.188434 CCACAAGCATCTCTTTCCTCATTA 58.812 41.667 0.00 0.00 31.27 1.90
204 205 4.015084 CCACAAGCATCTCTTTCCTCATT 58.985 43.478 0.00 0.00 31.27 2.57
205 206 3.009916 ACCACAAGCATCTCTTTCCTCAT 59.990 43.478 0.00 0.00 31.27 2.90
206 207 2.373169 ACCACAAGCATCTCTTTCCTCA 59.627 45.455 0.00 0.00 31.27 3.86
207 208 3.064900 ACCACAAGCATCTCTTTCCTC 57.935 47.619 0.00 0.00 31.27 3.71
208 209 4.202461 TGTTACCACAAGCATCTCTTTCCT 60.202 41.667 0.00 0.00 31.27 3.36
209 210 4.072131 TGTTACCACAAGCATCTCTTTCC 58.928 43.478 0.00 0.00 31.27 3.13
210 211 5.886960 ATGTTACCACAAGCATCTCTTTC 57.113 39.130 0.00 0.00 36.16 2.62
211 212 7.944729 ATTATGTTACCACAAGCATCTCTTT 57.055 32.000 0.00 0.00 36.16 2.52
212 213 9.060347 CATATTATGTTACCACAAGCATCTCTT 57.940 33.333 0.00 0.00 36.16 2.85
213 214 8.213679 ACATATTATGTTACCACAAGCATCTCT 58.786 33.333 3.40 0.00 41.63 3.10
214 215 8.383318 ACATATTATGTTACCACAAGCATCTC 57.617 34.615 3.40 0.00 41.63 2.75
238 239 3.554731 GGGAAGCGCTATGTTACAGTAAC 59.445 47.826 12.05 15.58 39.11 2.50
239 240 3.735820 CGGGAAGCGCTATGTTACAGTAA 60.736 47.826 12.05 0.00 0.00 2.24
240 241 2.223641 CGGGAAGCGCTATGTTACAGTA 60.224 50.000 12.05 0.00 0.00 2.74
241 242 1.470979 CGGGAAGCGCTATGTTACAGT 60.471 52.381 12.05 0.00 0.00 3.55
242 243 1.202371 TCGGGAAGCGCTATGTTACAG 60.202 52.381 12.05 0.00 0.00 2.74
243 244 0.818938 TCGGGAAGCGCTATGTTACA 59.181 50.000 12.05 0.00 0.00 2.41
244 245 1.488527 CTCGGGAAGCGCTATGTTAC 58.511 55.000 12.05 0.00 0.00 2.50
245 246 0.387929 CCTCGGGAAGCGCTATGTTA 59.612 55.000 12.05 0.00 0.00 2.41
246 247 1.144057 CCTCGGGAAGCGCTATGTT 59.856 57.895 12.05 0.00 0.00 2.71
247 248 2.815308 CCTCGGGAAGCGCTATGT 59.185 61.111 12.05 0.00 0.00 2.29
248 249 2.663188 GCCTCGGGAAGCGCTATG 60.663 66.667 12.05 0.24 0.00 2.23
249 250 2.252072 TTTGCCTCGGGAAGCGCTAT 62.252 55.000 12.05 0.00 0.00 2.97
250 251 2.457743 TTTTGCCTCGGGAAGCGCTA 62.458 55.000 12.05 0.00 0.00 4.26
251 252 3.842925 TTTTGCCTCGGGAAGCGCT 62.843 57.895 2.64 2.64 0.00 5.92
252 253 2.700773 ATTTTGCCTCGGGAAGCGC 61.701 57.895 0.00 0.00 0.00 5.92
253 254 1.137404 CATTTTGCCTCGGGAAGCG 59.863 57.895 0.00 0.00 0.00 4.68
254 255 0.453390 CTCATTTTGCCTCGGGAAGC 59.547 55.000 0.00 0.00 0.00 3.86
255 256 1.740025 GACTCATTTTGCCTCGGGAAG 59.260 52.381 0.00 0.00 0.00 3.46
256 257 1.351017 AGACTCATTTTGCCTCGGGAA 59.649 47.619 0.00 0.00 0.00 3.97
257 258 0.984230 AGACTCATTTTGCCTCGGGA 59.016 50.000 0.00 0.00 0.00 5.14
258 259 2.691409 TAGACTCATTTTGCCTCGGG 57.309 50.000 0.00 0.00 0.00 5.14
259 260 3.797039 TCATAGACTCATTTTGCCTCGG 58.203 45.455 0.00 0.00 0.00 4.63
260 261 3.806521 CCTCATAGACTCATTTTGCCTCG 59.193 47.826 0.00 0.00 0.00 4.63
261 262 3.563390 GCCTCATAGACTCATTTTGCCTC 59.437 47.826 0.00 0.00 0.00 4.70
262 263 3.549794 GCCTCATAGACTCATTTTGCCT 58.450 45.455 0.00 0.00 0.00 4.75
263 264 2.620585 GGCCTCATAGACTCATTTTGCC 59.379 50.000 0.00 0.00 0.00 4.52
264 265 2.620585 GGGCCTCATAGACTCATTTTGC 59.379 50.000 0.84 0.00 0.00 3.68
265 266 4.162040 AGGGCCTCATAGACTCATTTTG 57.838 45.455 0.00 0.00 0.00 2.44
266 267 4.385754 GGAAGGGCCTCATAGACTCATTTT 60.386 45.833 6.46 0.00 0.00 1.82
267 268 3.137360 GGAAGGGCCTCATAGACTCATTT 59.863 47.826 6.46 0.00 0.00 2.32
268 269 2.708325 GGAAGGGCCTCATAGACTCATT 59.292 50.000 6.46 0.00 0.00 2.57
269 270 2.334023 GGAAGGGCCTCATAGACTCAT 58.666 52.381 6.46 0.00 0.00 2.90
270 271 1.692762 GGGAAGGGCCTCATAGACTCA 60.693 57.143 6.46 0.00 36.66 3.41
271 272 1.052617 GGGAAGGGCCTCATAGACTC 58.947 60.000 6.46 0.00 36.66 3.36
272 273 0.343372 TGGGAAGGGCCTCATAGACT 59.657 55.000 6.46 0.00 36.66 3.24
273 274 0.761802 CTGGGAAGGGCCTCATAGAC 59.238 60.000 6.46 0.00 36.66 2.59
274 275 0.343372 ACTGGGAAGGGCCTCATAGA 59.657 55.000 6.46 0.00 36.66 1.98
275 276 0.471617 CACTGGGAAGGGCCTCATAG 59.528 60.000 6.46 6.00 36.66 2.23
276 277 1.635817 GCACTGGGAAGGGCCTCATA 61.636 60.000 6.46 0.00 36.66 2.15
277 278 2.988839 GCACTGGGAAGGGCCTCAT 61.989 63.158 6.46 0.00 36.66 2.90
278 279 3.650950 GCACTGGGAAGGGCCTCA 61.651 66.667 6.46 0.00 36.66 3.86
279 280 3.334054 AGCACTGGGAAGGGCCTC 61.334 66.667 6.46 0.00 36.66 4.70
280 281 3.334054 GAGCACTGGGAAGGGCCT 61.334 66.667 0.00 0.00 36.66 5.19
281 282 4.432741 GGAGCACTGGGAAGGGCC 62.433 72.222 0.00 0.00 0.00 5.80
282 283 3.650950 TGGAGCACTGGGAAGGGC 61.651 66.667 0.00 0.00 0.00 5.19
283 284 2.352805 GTGGAGCACTGGGAAGGG 59.647 66.667 0.00 0.00 0.00 3.95
284 285 2.352805 GGTGGAGCACTGGGAAGG 59.647 66.667 0.00 0.00 34.40 3.46
285 286 2.046892 CGGTGGAGCACTGGGAAG 60.047 66.667 0.00 0.00 37.12 3.46
286 287 2.847234 ACGGTGGAGCACTGGGAA 60.847 61.111 0.00 0.00 44.25 3.97
287 288 3.625897 CACGGTGGAGCACTGGGA 61.626 66.667 0.00 0.00 46.14 4.37
288 289 4.704833 CCACGGTGGAGCACTGGG 62.705 72.222 22.77 0.00 44.25 4.45
289 290 3.625897 TCCACGGTGGAGCACTGG 61.626 66.667 25.53 0.00 42.67 4.00
296 297 1.188871 TAGCACATGTCCACGGTGGA 61.189 55.000 25.53 25.53 45.98 4.02
297 298 0.321210 TTAGCACATGTCCACGGTGG 60.321 55.000 21.27 21.27 39.43 4.61
298 299 1.078709 CTTAGCACATGTCCACGGTG 58.921 55.000 0.00 0.00 35.68 4.94
299 300 0.673644 GCTTAGCACATGTCCACGGT 60.674 55.000 0.00 0.00 0.00 4.83
300 301 0.673333 TGCTTAGCACATGTCCACGG 60.673 55.000 1.39 0.00 31.71 4.94
301 302 1.063027 CATGCTTAGCACATGTCCACG 59.937 52.381 9.82 0.00 43.04 4.94
302 303 1.202222 GCATGCTTAGCACATGTCCAC 60.202 52.381 9.82 0.00 45.40 4.02
303 304 1.097232 GCATGCTTAGCACATGTCCA 58.903 50.000 9.82 0.00 45.40 4.02
304 305 0.383231 GGCATGCTTAGCACATGTCC 59.617 55.000 18.92 7.22 42.90 4.02
305 306 3.932459 GGCATGCTTAGCACATGTC 57.068 52.632 18.92 2.28 45.40 3.06
306 307 0.813184 GTGGCATGCTTAGCACATGT 59.187 50.000 18.92 0.00 45.40 3.21
307 308 0.812549 TGTGGCATGCTTAGCACATG 59.187 50.000 19.50 6.22 43.04 3.21
308 309 1.771565 ATGTGGCATGCTTAGCACAT 58.228 45.000 25.42 25.42 43.04 3.21
309 310 2.416680 TATGTGGCATGCTTAGCACA 57.583 45.000 23.69 23.69 43.04 4.57
310 311 2.542411 GCTTATGTGGCATGCTTAGCAC 60.542 50.000 18.92 16.85 43.04 4.40
311 312 1.677576 GCTTATGTGGCATGCTTAGCA 59.322 47.619 18.92 10.09 44.86 3.49
312 313 1.677576 TGCTTATGTGGCATGCTTAGC 59.322 47.619 18.92 12.72 34.56 3.09
313 314 4.374843 TTTGCTTATGTGGCATGCTTAG 57.625 40.909 18.92 1.84 39.54 2.18
314 315 4.797800 TTTTGCTTATGTGGCATGCTTA 57.202 36.364 18.92 4.21 39.54 3.09
315 316 3.681593 TTTTGCTTATGTGGCATGCTT 57.318 38.095 18.92 3.00 39.54 3.91
316 317 3.681593 TTTTTGCTTATGTGGCATGCT 57.318 38.095 18.92 0.00 39.54 3.79
334 335 3.883830 TGTTGTGCCATGTCACTTTTT 57.116 38.095 8.54 0.00 37.81 1.94
335 336 4.405116 AATGTTGTGCCATGTCACTTTT 57.595 36.364 8.54 0.00 37.81 2.27
336 337 4.405116 AAATGTTGTGCCATGTCACTTT 57.595 36.364 8.54 0.00 37.81 2.66
337 338 5.528043 TTAAATGTTGTGCCATGTCACTT 57.472 34.783 8.54 0.00 37.81 3.16
338 339 5.301551 TCTTTAAATGTTGTGCCATGTCACT 59.698 36.000 8.54 0.00 37.81 3.41
339 340 5.527951 TCTTTAAATGTTGTGCCATGTCAC 58.472 37.500 0.00 0.00 37.48 3.67
340 341 5.278907 CCTCTTTAAATGTTGTGCCATGTCA 60.279 40.000 0.00 0.00 0.00 3.58
341 342 5.163513 CCTCTTTAAATGTTGTGCCATGTC 58.836 41.667 0.00 0.00 0.00 3.06
342 343 4.021192 CCCTCTTTAAATGTTGTGCCATGT 60.021 41.667 0.00 0.00 0.00 3.21
343 344 4.497300 CCCTCTTTAAATGTTGTGCCATG 58.503 43.478 0.00 0.00 0.00 3.66
344 345 3.515104 CCCCTCTTTAAATGTTGTGCCAT 59.485 43.478 0.00 0.00 0.00 4.40
345 346 2.896685 CCCCTCTTTAAATGTTGTGCCA 59.103 45.455 0.00 0.00 0.00 4.92
346 347 3.161866 TCCCCTCTTTAAATGTTGTGCC 58.838 45.455 0.00 0.00 0.00 5.01
347 348 4.079253 TCTCCCCTCTTTAAATGTTGTGC 58.921 43.478 0.00 0.00 0.00 4.57
348 349 5.560724 TCTCTCCCCTCTTTAAATGTTGTG 58.439 41.667 0.00 0.00 0.00 3.33
349 350 5.310857 ACTCTCTCCCCTCTTTAAATGTTGT 59.689 40.000 0.00 0.00 0.00 3.32
350 351 5.810095 ACTCTCTCCCCTCTTTAAATGTTG 58.190 41.667 0.00 0.00 0.00 3.33
351 352 6.731448 AGTACTCTCTCCCCTCTTTAAATGTT 59.269 38.462 0.00 0.00 0.00 2.71
352 353 6.265304 AGTACTCTCTCCCCTCTTTAAATGT 58.735 40.000 0.00 0.00 0.00 2.71
353 354 6.800072 AGTACTCTCTCCCCTCTTTAAATG 57.200 41.667 0.00 0.00 0.00 2.32
354 355 7.311360 CCAAAGTACTCTCTCCCCTCTTTAAAT 60.311 40.741 0.00 0.00 0.00 1.40
355 356 6.013639 CCAAAGTACTCTCTCCCCTCTTTAAA 60.014 42.308 0.00 0.00 0.00 1.52
356 357 5.484290 CCAAAGTACTCTCTCCCCTCTTTAA 59.516 44.000 0.00 0.00 0.00 1.52
357 358 5.024118 CCAAAGTACTCTCTCCCCTCTTTA 58.976 45.833 0.00 0.00 0.00 1.85
358 359 3.841255 CCAAAGTACTCTCTCCCCTCTTT 59.159 47.826 0.00 0.00 0.00 2.52
359 360 3.181405 ACCAAAGTACTCTCTCCCCTCTT 60.181 47.826 0.00 0.00 0.00 2.85
360 361 2.384029 ACCAAAGTACTCTCTCCCCTCT 59.616 50.000 0.00 0.00 0.00 3.69
361 362 2.498078 CACCAAAGTACTCTCTCCCCTC 59.502 54.545 0.00 0.00 0.00 4.30
362 363 2.111972 TCACCAAAGTACTCTCTCCCCT 59.888 50.000 0.00 0.00 0.00 4.79
363 364 2.234168 GTCACCAAAGTACTCTCTCCCC 59.766 54.545 0.00 0.00 0.00 4.81
364 365 2.234168 GGTCACCAAAGTACTCTCTCCC 59.766 54.545 0.00 0.00 0.00 4.30
365 366 2.234168 GGGTCACCAAAGTACTCTCTCC 59.766 54.545 0.00 0.00 36.50 3.71
366 367 2.234168 GGGGTCACCAAAGTACTCTCTC 59.766 54.545 0.00 0.00 39.85 3.20
367 368 2.258109 GGGGTCACCAAAGTACTCTCT 58.742 52.381 0.00 0.00 39.85 3.10
368 369 2.764439 GGGGTCACCAAAGTACTCTC 57.236 55.000 0.00 0.00 39.85 3.20
379 380 2.603652 GGTTCTCCCTGGGGTCACC 61.604 68.421 14.00 12.21 40.81 4.02
380 381 1.423794 TTGGTTCTCCCTGGGGTCAC 61.424 60.000 14.00 6.72 36.47 3.67
381 382 1.073319 TTGGTTCTCCCTGGGGTCA 60.073 57.895 14.00 1.78 36.47 4.02
382 383 1.685820 CTTGGTTCTCCCTGGGGTC 59.314 63.158 14.00 1.03 36.47 4.46
383 384 2.539081 GCTTGGTTCTCCCTGGGGT 61.539 63.158 14.00 0.00 36.47 4.95
384 385 2.356667 GCTTGGTTCTCCCTGGGG 59.643 66.667 14.00 2.42 0.00 4.96
385 386 2.080336 TTGGCTTGGTTCTCCCTGGG 62.080 60.000 6.33 6.33 0.00 4.45
386 387 0.610232 CTTGGCTTGGTTCTCCCTGG 60.610 60.000 0.00 0.00 0.00 4.45
387 388 1.246737 GCTTGGCTTGGTTCTCCCTG 61.247 60.000 0.00 0.00 0.00 4.45
388 389 1.075659 GCTTGGCTTGGTTCTCCCT 59.924 57.895 0.00 0.00 0.00 4.20
389 390 2.335712 CGCTTGGCTTGGTTCTCCC 61.336 63.158 0.00 0.00 0.00 4.30
390 391 2.982744 GCGCTTGGCTTGGTTCTCC 61.983 63.158 0.00 0.00 39.11 3.71
391 392 2.563427 GCGCTTGGCTTGGTTCTC 59.437 61.111 0.00 0.00 39.11 2.87
392 393 3.357079 CGCGCTTGGCTTGGTTCT 61.357 61.111 5.56 0.00 40.44 3.01
393 394 3.314388 CTCGCGCTTGGCTTGGTTC 62.314 63.158 5.56 0.00 40.44 3.62
394 395 3.357079 CTCGCGCTTGGCTTGGTT 61.357 61.111 5.56 0.00 40.44 3.67
395 396 3.825160 TTCTCGCGCTTGGCTTGGT 62.825 57.895 5.56 0.00 40.44 3.67
396 397 3.049674 TTCTCGCGCTTGGCTTGG 61.050 61.111 5.56 0.00 40.44 3.61
397 398 2.174349 GTTCTCGCGCTTGGCTTG 59.826 61.111 5.56 0.00 40.44 4.01
398 399 2.167398 TAGGTTCTCGCGCTTGGCTT 62.167 55.000 5.56 0.00 40.44 4.35
399 400 2.564553 CTAGGTTCTCGCGCTTGGCT 62.565 60.000 5.56 0.00 40.44 4.75
400 401 2.125673 TAGGTTCTCGCGCTTGGC 60.126 61.111 5.56 0.00 38.69 4.52
401 402 1.519455 CCTAGGTTCTCGCGCTTGG 60.519 63.158 5.56 0.00 0.00 3.61
402 403 2.167861 GCCTAGGTTCTCGCGCTTG 61.168 63.158 11.31 0.00 0.00 4.01
403 404 2.167398 TTGCCTAGGTTCTCGCGCTT 62.167 55.000 11.31 0.00 0.00 4.68
404 405 2.167398 TTTGCCTAGGTTCTCGCGCT 62.167 55.000 11.31 0.00 0.00 5.92
405 406 1.740296 TTTGCCTAGGTTCTCGCGC 60.740 57.895 11.31 0.00 0.00 6.86
406 407 0.389948 AGTTTGCCTAGGTTCTCGCG 60.390 55.000 11.31 0.00 0.00 5.87
407 408 2.094130 AGTAGTTTGCCTAGGTTCTCGC 60.094 50.000 11.31 0.00 0.00 5.03
408 409 3.870633 AGTAGTTTGCCTAGGTTCTCG 57.129 47.619 11.31 0.00 0.00 4.04
409 410 7.822822 TCATTTAAGTAGTTTGCCTAGGTTCTC 59.177 37.037 11.31 0.00 0.00 2.87
410 411 7.686434 TCATTTAAGTAGTTTGCCTAGGTTCT 58.314 34.615 11.31 6.52 0.00 3.01
411 412 7.916914 TCATTTAAGTAGTTTGCCTAGGTTC 57.083 36.000 11.31 0.00 0.00 3.62
412 413 8.573885 GTTTCATTTAAGTAGTTTGCCTAGGTT 58.426 33.333 11.31 0.00 0.00 3.50
413 414 7.722285 TGTTTCATTTAAGTAGTTTGCCTAGGT 59.278 33.333 11.31 0.00 0.00 3.08
414 415 8.106247 TGTTTCATTTAAGTAGTTTGCCTAGG 57.894 34.615 3.67 3.67 0.00 3.02
417 418 9.830975 AAATTGTTTCATTTAAGTAGTTTGCCT 57.169 25.926 0.00 0.00 0.00 4.75
418 419 9.862585 CAAATTGTTTCATTTAAGTAGTTTGCC 57.137 29.630 0.00 0.00 0.00 4.52
419 420 9.862585 CCAAATTGTTTCATTTAAGTAGTTTGC 57.137 29.630 0.00 0.00 0.00 3.68
420 421 9.862585 GCCAAATTGTTTCATTTAAGTAGTTTG 57.137 29.630 0.00 0.00 0.00 2.93
421 422 9.051679 GGCCAAATTGTTTCATTTAAGTAGTTT 57.948 29.630 0.00 0.00 0.00 2.66
422 423 8.207545 TGGCCAAATTGTTTCATTTAAGTAGTT 58.792 29.630 0.61 0.00 0.00 2.24
423 424 7.731054 TGGCCAAATTGTTTCATTTAAGTAGT 58.269 30.769 0.61 0.00 0.00 2.73
424 425 8.600449 TTGGCCAAATTGTTTCATTTAAGTAG 57.400 30.769 17.98 0.00 0.00 2.57
425 426 8.997323 CATTGGCCAAATTGTTTCATTTAAGTA 58.003 29.630 24.71 0.00 0.00 2.24
426 427 7.521910 GCATTGGCCAAATTGTTTCATTTAAGT 60.522 33.333 24.71 0.00 0.00 2.24
427 428 6.802834 GCATTGGCCAAATTGTTTCATTTAAG 59.197 34.615 24.71 0.00 0.00 1.85
428 429 6.263842 TGCATTGGCCAAATTGTTTCATTTAA 59.736 30.769 24.71 0.00 40.13 1.52
429 430 5.766670 TGCATTGGCCAAATTGTTTCATTTA 59.233 32.000 24.71 0.00 40.13 1.40
430 431 4.583489 TGCATTGGCCAAATTGTTTCATTT 59.417 33.333 24.71 0.00 40.13 2.32
431 432 4.142790 TGCATTGGCCAAATTGTTTCATT 58.857 34.783 24.71 0.00 40.13 2.57
432 433 3.752665 TGCATTGGCCAAATTGTTTCAT 58.247 36.364 24.71 0.00 40.13 2.57
433 434 3.204306 TGCATTGGCCAAATTGTTTCA 57.796 38.095 24.71 7.95 40.13 2.69
434 435 3.752222 TCATGCATTGGCCAAATTGTTTC 59.248 39.130 24.71 5.31 40.13 2.78
435 436 3.752665 TCATGCATTGGCCAAATTGTTT 58.247 36.364 24.71 0.66 40.13 2.83
436 437 3.420300 TCATGCATTGGCCAAATTGTT 57.580 38.095 24.71 1.56 40.13 2.83
437 438 3.420300 TTCATGCATTGGCCAAATTGT 57.580 38.095 24.71 2.04 40.13 2.71
438 439 4.004314 TCTTTCATGCATTGGCCAAATTG 58.996 39.130 24.71 18.50 40.13 2.32
439 440 4.004982 GTCTTTCATGCATTGGCCAAATT 58.995 39.130 24.71 3.41 40.13 1.82
440 441 3.262405 AGTCTTTCATGCATTGGCCAAAT 59.738 39.130 24.71 9.02 40.13 2.32
441 442 2.633967 AGTCTTTCATGCATTGGCCAAA 59.366 40.909 24.71 6.52 40.13 3.28
442 443 2.250031 AGTCTTTCATGCATTGGCCAA 58.750 42.857 23.00 23.00 40.13 4.52
443 444 1.927487 AGTCTTTCATGCATTGGCCA 58.073 45.000 0.00 0.00 40.13 5.36
444 445 3.323751 AAAGTCTTTCATGCATTGGCC 57.676 42.857 0.00 0.00 40.13 5.36
445 446 5.314923 TCTAAAGTCTTTCATGCATTGGC 57.685 39.130 0.00 0.00 41.68 4.52
446 447 8.218338 AGTATCTAAAGTCTTTCATGCATTGG 57.782 34.615 0.00 0.00 0.00 3.16
450 451 9.587772 GAGTTAGTATCTAAAGTCTTTCATGCA 57.412 33.333 0.00 0.00 0.00 3.96
451 452 9.587772 TGAGTTAGTATCTAAAGTCTTTCATGC 57.412 33.333 0.00 0.00 0.00 4.06
472 473 8.792633 TGCTAAGCACACTTTATTTAATGAGTT 58.207 29.630 0.00 0.00 37.33 3.01
473 474 8.335532 TGCTAAGCACACTTTATTTAATGAGT 57.664 30.769 0.00 0.00 37.33 3.41
474 475 9.065871 GTTGCTAAGCACACTTTATTTAATGAG 57.934 33.333 0.00 0.00 38.71 2.90
475 476 8.572185 TGTTGCTAAGCACACTTTATTTAATGA 58.428 29.630 0.00 0.00 38.71 2.57
476 477 8.741101 TGTTGCTAAGCACACTTTATTTAATG 57.259 30.769 0.00 0.00 38.71 1.90
477 478 9.191995 GTTGTTGCTAAGCACACTTTATTTAAT 57.808 29.630 0.00 0.00 38.71 1.40
478 479 8.191446 TGTTGTTGCTAAGCACACTTTATTTAA 58.809 29.630 0.00 0.00 38.71 1.52
479 480 7.708051 TGTTGTTGCTAAGCACACTTTATTTA 58.292 30.769 0.00 0.00 38.71 1.40
480 481 6.568869 TGTTGTTGCTAAGCACACTTTATTT 58.431 32.000 0.00 0.00 38.71 1.40
481 482 6.142818 TGTTGTTGCTAAGCACACTTTATT 57.857 33.333 0.00 0.00 38.71 1.40
482 483 5.766150 TGTTGTTGCTAAGCACACTTTAT 57.234 34.783 0.00 0.00 38.71 1.40
483 484 5.124776 ACTTGTTGTTGCTAAGCACACTTTA 59.875 36.000 0.00 0.00 38.71 1.85
484 485 4.082245 ACTTGTTGTTGCTAAGCACACTTT 60.082 37.500 0.00 0.00 38.71 2.66
485 486 3.443681 ACTTGTTGTTGCTAAGCACACTT 59.556 39.130 0.00 0.00 38.71 3.16
486 487 3.016736 ACTTGTTGTTGCTAAGCACACT 58.983 40.909 0.00 0.00 38.71 3.55
487 488 3.420839 ACTTGTTGTTGCTAAGCACAC 57.579 42.857 0.00 0.00 38.71 3.82
488 489 5.568685 TTAACTTGTTGTTGCTAAGCACA 57.431 34.783 0.00 0.00 38.71 4.57
489 490 4.441087 GCTTAACTTGTTGTTGCTAAGCAC 59.559 41.667 9.96 0.00 42.66 4.40
490 491 4.097135 TGCTTAACTTGTTGTTGCTAAGCA 59.903 37.500 12.31 12.31 46.65 3.91
491 492 4.441087 GTGCTTAACTTGTTGTTGCTAAGC 59.559 41.667 8.58 8.58 43.07 3.09
492 493 4.976116 GGTGCTTAACTTGTTGTTGCTAAG 59.024 41.667 0.00 0.00 39.55 2.18
493 494 4.642885 AGGTGCTTAACTTGTTGTTGCTAA 59.357 37.500 0.00 0.00 39.55 3.09
494 495 4.204012 AGGTGCTTAACTTGTTGTTGCTA 58.796 39.130 0.00 0.00 39.55 3.49
495 496 3.023832 AGGTGCTTAACTTGTTGTTGCT 58.976 40.909 0.00 0.00 39.55 3.91
496 497 3.436700 AGGTGCTTAACTTGTTGTTGC 57.563 42.857 0.00 0.00 39.55 4.17
512 513 3.875727 CTCAAGTCTCCATTGCATAGGTG 59.124 47.826 5.01 3.28 0.00 4.00
513 514 3.521126 ACTCAAGTCTCCATTGCATAGGT 59.479 43.478 5.01 0.00 0.00 3.08
514 515 4.148128 ACTCAAGTCTCCATTGCATAGG 57.852 45.455 0.00 0.00 0.00 2.57
515 516 4.201891 GCAACTCAAGTCTCCATTGCATAG 60.202 45.833 0.00 0.00 41.56 2.23
516 517 3.691118 GCAACTCAAGTCTCCATTGCATA 59.309 43.478 0.00 0.00 41.56 3.14
517 518 2.490903 GCAACTCAAGTCTCCATTGCAT 59.509 45.455 0.00 0.00 41.56 3.96
518 519 1.881973 GCAACTCAAGTCTCCATTGCA 59.118 47.619 0.00 0.00 41.56 4.08
519 520 2.157738 AGCAACTCAAGTCTCCATTGC 58.842 47.619 0.00 0.00 42.11 3.56
520 521 4.394300 CCTTAGCAACTCAAGTCTCCATTG 59.606 45.833 0.00 0.00 0.00 2.82
521 522 4.042187 ACCTTAGCAACTCAAGTCTCCATT 59.958 41.667 0.00 0.00 0.00 3.16
522 523 3.584848 ACCTTAGCAACTCAAGTCTCCAT 59.415 43.478 0.00 0.00 0.00 3.41
523 524 2.972713 ACCTTAGCAACTCAAGTCTCCA 59.027 45.455 0.00 0.00 0.00 3.86
524 525 3.686916 ACCTTAGCAACTCAAGTCTCC 57.313 47.619 0.00 0.00 0.00 3.71
525 526 8.773404 TTAAATACCTTAGCAACTCAAGTCTC 57.227 34.615 0.00 0.00 0.00 3.36
526 527 9.167311 CATTAAATACCTTAGCAACTCAAGTCT 57.833 33.333 0.00 0.00 0.00 3.24
527 528 7.910683 GCATTAAATACCTTAGCAACTCAAGTC 59.089 37.037 0.00 0.00 0.00 3.01
528 529 7.393234 TGCATTAAATACCTTAGCAACTCAAGT 59.607 33.333 0.00 0.00 0.00 3.16
529 530 7.698130 GTGCATTAAATACCTTAGCAACTCAAG 59.302 37.037 0.00 0.00 31.78 3.02
530 531 7.393234 AGTGCATTAAATACCTTAGCAACTCAA 59.607 33.333 0.00 0.00 31.78 3.02
531 532 6.884295 AGTGCATTAAATACCTTAGCAACTCA 59.116 34.615 0.00 0.00 31.78 3.41
532 533 7.321745 AGTGCATTAAATACCTTAGCAACTC 57.678 36.000 0.00 0.00 31.78 3.01
533 534 7.703058 AAGTGCATTAAATACCTTAGCAACT 57.297 32.000 0.00 0.00 31.78 3.16
534 535 7.644157 GCTAAGTGCATTAAATACCTTAGCAAC 59.356 37.037 24.94 6.67 44.06 4.17
535 536 7.703328 GCTAAGTGCATTAAATACCTTAGCAA 58.297 34.615 24.94 0.00 44.06 3.91
536 537 7.259290 GCTAAGTGCATTAAATACCTTAGCA 57.741 36.000 24.94 0.00 44.06 3.49
552 553 2.869192 GCTTAGATGAGGTGCTAAGTGC 59.131 50.000 0.00 0.00 43.36 4.40
553 554 3.868077 GTGCTTAGATGAGGTGCTAAGTG 59.132 47.826 0.00 0.00 43.36 3.16
554 555 3.118592 GGTGCTTAGATGAGGTGCTAAGT 60.119 47.826 0.00 0.00 43.36 2.24
555 556 3.133721 AGGTGCTTAGATGAGGTGCTAAG 59.866 47.826 0.00 0.00 43.95 2.18
556 557 3.107601 AGGTGCTTAGATGAGGTGCTAA 58.892 45.455 0.00 0.00 0.00 3.09
557 558 2.752030 AGGTGCTTAGATGAGGTGCTA 58.248 47.619 0.00 0.00 0.00 3.49
558 559 1.577736 AGGTGCTTAGATGAGGTGCT 58.422 50.000 0.00 0.00 0.00 4.40
559 560 2.409948 AAGGTGCTTAGATGAGGTGC 57.590 50.000 0.00 0.00 0.00 5.01
576 577 4.446719 GCTCAGACCTTTTTCAATGCAAAG 59.553 41.667 0.00 0.00 0.00 2.77
577 578 4.099881 AGCTCAGACCTTTTTCAATGCAAA 59.900 37.500 0.00 0.00 0.00 3.68
578 579 3.638160 AGCTCAGACCTTTTTCAATGCAA 59.362 39.130 0.00 0.00 0.00 4.08
579 580 3.225104 AGCTCAGACCTTTTTCAATGCA 58.775 40.909 0.00 0.00 0.00 3.96
580 581 3.930634 AGCTCAGACCTTTTTCAATGC 57.069 42.857 0.00 0.00 0.00 3.56
583 584 9.295825 TCATTTATTAGCTCAGACCTTTTTCAA 57.704 29.630 0.00 0.00 0.00 2.69
584 585 8.862325 TCATTTATTAGCTCAGACCTTTTTCA 57.138 30.769 0.00 0.00 0.00 2.69
585 586 9.780413 CTTCATTTATTAGCTCAGACCTTTTTC 57.220 33.333 0.00 0.00 0.00 2.29
586 587 8.246871 GCTTCATTTATTAGCTCAGACCTTTTT 58.753 33.333 0.00 0.00 32.26 1.94
587 588 7.394359 TGCTTCATTTATTAGCTCAGACCTTTT 59.606 33.333 0.00 0.00 35.93 2.27
588 589 6.886459 TGCTTCATTTATTAGCTCAGACCTTT 59.114 34.615 0.00 0.00 35.93 3.11
589 590 6.418101 TGCTTCATTTATTAGCTCAGACCTT 58.582 36.000 0.00 0.00 35.93 3.50
590 591 5.994250 TGCTTCATTTATTAGCTCAGACCT 58.006 37.500 0.00 0.00 35.93 3.85
591 592 6.458888 GGTTGCTTCATTTATTAGCTCAGACC 60.459 42.308 0.00 0.00 35.93 3.85
592 593 6.317391 AGGTTGCTTCATTTATTAGCTCAGAC 59.683 38.462 0.00 0.00 35.93 3.51
593 594 6.418101 AGGTTGCTTCATTTATTAGCTCAGA 58.582 36.000 0.00 0.00 35.93 3.27
594 595 6.690194 AGGTTGCTTCATTTATTAGCTCAG 57.310 37.500 0.00 0.00 35.93 3.35
595 596 7.992608 TCATAGGTTGCTTCATTTATTAGCTCA 59.007 33.333 0.00 0.00 35.93 4.26
596 597 8.383318 TCATAGGTTGCTTCATTTATTAGCTC 57.617 34.615 0.00 0.00 35.93 4.09
597 598 8.930846 ATCATAGGTTGCTTCATTTATTAGCT 57.069 30.769 0.00 0.00 35.93 3.32
648 649 9.955102 TGACACTAGTCTAAGTTACTATCTTCA 57.045 33.333 0.00 0.00 45.20 3.02
654 655 9.623000 TGCATATGACACTAGTCTAAGTTACTA 57.377 33.333 6.97 0.00 45.20 1.82
655 656 8.521170 TGCATATGACACTAGTCTAAGTTACT 57.479 34.615 6.97 0.00 45.20 2.24
656 657 9.186323 CATGCATATGACACTAGTCTAAGTTAC 57.814 37.037 6.97 0.00 45.20 2.50
657 658 9.131791 TCATGCATATGACACTAGTCTAAGTTA 57.868 33.333 6.97 0.00 45.20 2.24
658 659 8.011844 TCATGCATATGACACTAGTCTAAGTT 57.988 34.615 6.97 0.00 45.20 2.66
659 660 7.588497 TCATGCATATGACACTAGTCTAAGT 57.412 36.000 6.97 0.00 45.20 2.24
660 661 9.566530 GTATCATGCATATGACACTAGTCTAAG 57.433 37.037 6.97 0.00 45.54 2.18
661 662 9.301897 AGTATCATGCATATGACACTAGTCTAA 57.698 33.333 6.97 0.00 46.40 2.10
662 663 8.870075 AGTATCATGCATATGACACTAGTCTA 57.130 34.615 6.97 0.00 46.40 2.59
663 664 7.773489 AGTATCATGCATATGACACTAGTCT 57.227 36.000 6.97 0.00 46.40 3.24
677 678 9.021807 GGGAGTAACTTATACTAGTATCATGCA 57.978 37.037 18.68 0.00 0.00 3.96
678 679 8.468399 GGGGAGTAACTTATACTAGTATCATGC 58.532 40.741 18.68 7.64 0.00 4.06
679 680 9.529823 TGGGGAGTAACTTATACTAGTATCATG 57.470 37.037 18.68 12.10 0.00 3.07
680 681 9.531158 GTGGGGAGTAACTTATACTAGTATCAT 57.469 37.037 18.68 6.75 0.00 2.45
681 682 8.730948 AGTGGGGAGTAACTTATACTAGTATCA 58.269 37.037 18.68 7.60 0.00 2.15
685 686 8.730948 TCATAGTGGGGAGTAACTTATACTAGT 58.269 37.037 0.00 0.00 0.00 2.57
686 687 9.012161 GTCATAGTGGGGAGTAACTTATACTAG 57.988 40.741 0.00 0.00 0.00 2.57
687 688 8.730948 AGTCATAGTGGGGAGTAACTTATACTA 58.269 37.037 0.00 0.00 0.00 1.82
688 689 7.593653 AGTCATAGTGGGGAGTAACTTATACT 58.406 38.462 0.00 0.00 0.00 2.12
689 690 7.836479 AGTCATAGTGGGGAGTAACTTATAC 57.164 40.000 0.00 0.00 0.00 1.47
690 691 7.668886 GCTAGTCATAGTGGGGAGTAACTTATA 59.331 40.741 0.00 0.00 0.00 0.98
691 692 6.494146 GCTAGTCATAGTGGGGAGTAACTTAT 59.506 42.308 0.00 0.00 0.00 1.73
692 693 5.832060 GCTAGTCATAGTGGGGAGTAACTTA 59.168 44.000 0.00 0.00 0.00 2.24
693 694 4.650131 GCTAGTCATAGTGGGGAGTAACTT 59.350 45.833 0.00 0.00 0.00 2.66
694 695 4.216708 GCTAGTCATAGTGGGGAGTAACT 58.783 47.826 0.00 0.00 0.00 2.24
695 696 3.004524 CGCTAGTCATAGTGGGGAGTAAC 59.995 52.174 0.00 0.00 36.13 2.50
696 697 3.220110 CGCTAGTCATAGTGGGGAGTAA 58.780 50.000 0.00 0.00 36.13 2.24
697 698 2.860009 CGCTAGTCATAGTGGGGAGTA 58.140 52.381 0.00 0.00 36.13 2.59
698 699 1.693627 CGCTAGTCATAGTGGGGAGT 58.306 55.000 0.00 0.00 36.13 3.85
704 705 5.752892 TTTCTCTACCGCTAGTCATAGTG 57.247 43.478 0.00 0.00 38.93 2.74
705 706 6.773685 AGAATTTCTCTACCGCTAGTCATAGT 59.226 38.462 0.00 0.00 30.22 2.12
706 707 7.209471 AGAATTTCTCTACCGCTAGTCATAG 57.791 40.000 0.00 0.00 30.22 2.23
707 708 7.068348 ACAAGAATTTCTCTACCGCTAGTCATA 59.932 37.037 0.00 0.00 32.46 2.15
708 709 6.127310 ACAAGAATTTCTCTACCGCTAGTCAT 60.127 38.462 0.00 0.00 32.46 3.06
709 710 5.185249 ACAAGAATTTCTCTACCGCTAGTCA 59.815 40.000 0.00 0.00 32.46 3.41
710 711 5.652518 ACAAGAATTTCTCTACCGCTAGTC 58.347 41.667 0.00 0.00 32.46 2.59
711 712 5.662674 ACAAGAATTTCTCTACCGCTAGT 57.337 39.130 0.00 0.00 32.46 2.57
712 713 6.100004 TCAACAAGAATTTCTCTACCGCTAG 58.900 40.000 0.00 0.00 32.46 3.42
713 714 6.032956 TCAACAAGAATTTCTCTACCGCTA 57.967 37.500 0.00 0.00 32.46 4.26
714 715 4.894784 TCAACAAGAATTTCTCTACCGCT 58.105 39.130 0.00 0.00 32.46 5.52
715 716 5.582665 AGATCAACAAGAATTTCTCTACCGC 59.417 40.000 0.00 0.00 32.46 5.68
716 717 7.602517 AAGATCAACAAGAATTTCTCTACCG 57.397 36.000 0.00 0.00 32.46 4.02
727 728 9.886132 GGGAGTACTAATAAAGATCAACAAGAA 57.114 33.333 0.00 0.00 0.00 2.52
728 729 9.268282 AGGGAGTACTAATAAAGATCAACAAGA 57.732 33.333 0.00 0.00 0.00 3.02
729 730 9.535878 GAGGGAGTACTAATAAAGATCAACAAG 57.464 37.037 0.00 0.00 0.00 3.16
730 731 8.483758 GGAGGGAGTACTAATAAAGATCAACAA 58.516 37.037 0.00 0.00 0.00 2.83
731 732 7.844779 AGGAGGGAGTACTAATAAAGATCAACA 59.155 37.037 0.00 0.00 0.00 3.33
732 733 8.252624 AGGAGGGAGTACTAATAAAGATCAAC 57.747 38.462 0.00 0.00 0.00 3.18
733 734 8.855804 AAGGAGGGAGTACTAATAAAGATCAA 57.144 34.615 0.00 0.00 0.00 2.57
734 735 7.509659 GGAAGGAGGGAGTACTAATAAAGATCA 59.490 40.741 0.00 0.00 0.00 2.92
735 736 7.509659 TGGAAGGAGGGAGTACTAATAAAGATC 59.490 40.741 0.00 0.00 0.00 2.75
736 737 7.371043 TGGAAGGAGGGAGTACTAATAAAGAT 58.629 38.462 0.00 0.00 0.00 2.40
737 738 6.748969 TGGAAGGAGGGAGTACTAATAAAGA 58.251 40.000 0.00 0.00 0.00 2.52
738 739 7.290248 TGATGGAAGGAGGGAGTACTAATAAAG 59.710 40.741 0.00 0.00 0.00 1.85
739 740 7.136885 TGATGGAAGGAGGGAGTACTAATAAA 58.863 38.462 0.00 0.00 0.00 1.40
740 741 6.689561 TGATGGAAGGAGGGAGTACTAATAA 58.310 40.000 0.00 0.00 0.00 1.40
741 742 6.289482 TGATGGAAGGAGGGAGTACTAATA 57.711 41.667 0.00 0.00 0.00 0.98
742 743 5.151454 CTGATGGAAGGAGGGAGTACTAAT 58.849 45.833 0.00 0.00 0.00 1.73
743 744 4.547671 CTGATGGAAGGAGGGAGTACTAA 58.452 47.826 0.00 0.00 0.00 2.24
744 745 3.691603 GCTGATGGAAGGAGGGAGTACTA 60.692 52.174 0.00 0.00 0.00 1.82
745 746 2.957312 GCTGATGGAAGGAGGGAGTACT 60.957 54.545 0.00 0.00 0.00 2.73
746 747 1.414550 GCTGATGGAAGGAGGGAGTAC 59.585 57.143 0.00 0.00 0.00 2.73
747 748 1.692762 GGCTGATGGAAGGAGGGAGTA 60.693 57.143 0.00 0.00 0.00 2.59
748 749 0.985490 GGCTGATGGAAGGAGGGAGT 60.985 60.000 0.00 0.00 0.00 3.85
749 750 1.835693 GGCTGATGGAAGGAGGGAG 59.164 63.158 0.00 0.00 0.00 4.30
750 751 2.066393 CGGCTGATGGAAGGAGGGA 61.066 63.158 0.00 0.00 0.00 4.20
751 752 2.507944 CGGCTGATGGAAGGAGGG 59.492 66.667 0.00 0.00 0.00 4.30
752 753 2.203126 GCGGCTGATGGAAGGAGG 60.203 66.667 0.00 0.00 0.00 4.30
753 754 1.523258 CTGCGGCTGATGGAAGGAG 60.523 63.158 0.00 0.00 0.00 3.69
754 755 2.586245 CTGCGGCTGATGGAAGGA 59.414 61.111 0.00 0.00 0.00 3.36
755 756 2.335092 ATCCTGCGGCTGATGGAAGG 62.335 60.000 8.57 1.06 31.87 3.46
756 757 0.883814 GATCCTGCGGCTGATGGAAG 60.884 60.000 8.57 0.00 31.87 3.46
757 758 1.146930 GATCCTGCGGCTGATGGAA 59.853 57.895 8.57 0.00 31.87 3.53
758 759 2.036428 CTGATCCTGCGGCTGATGGA 62.036 60.000 8.57 9.00 0.00 3.41
833 834 4.020617 TGTGGCGGAAGAGGGCTG 62.021 66.667 0.00 0.00 0.00 4.85
849 850 3.428316 CGGAACCGGGGATTTTTATTGTG 60.428 47.826 6.32 0.00 35.56 3.33
851 852 2.480587 GCGGAACCGGGGATTTTTATTG 60.481 50.000 15.01 0.00 40.19 1.90
852 853 1.752498 GCGGAACCGGGGATTTTTATT 59.248 47.619 15.01 0.00 40.19 1.40
855 856 1.980232 GGCGGAACCGGGGATTTTT 60.980 57.895 15.01 0.00 40.19 1.94
878 879 5.254032 ACTGGGGTTTGAAGAGGAAGATTAT 59.746 40.000 0.00 0.00 0.00 1.28
899 900 3.151022 GAGGGGAGCGGAGGACTG 61.151 72.222 0.00 0.00 0.00 3.51
902 903 4.144727 GAGGAGGGGAGCGGAGGA 62.145 72.222 0.00 0.00 0.00 3.71
904 905 4.150454 AGGAGGAGGGGAGCGGAG 62.150 72.222 0.00 0.00 0.00 4.63
905 906 4.144727 GAGGAGGAGGGGAGCGGA 62.145 72.222 0.00 0.00 0.00 5.54
908 909 2.069430 CAAGGAGGAGGAGGGGAGC 61.069 68.421 0.00 0.00 0.00 4.70
939 942 1.267121 TTTCTTCCCGGTGAGGAGAG 58.733 55.000 0.00 0.00 45.00 3.20
950 953 4.031611 TCTCTAGCTAGGGTTTTCTTCCC 58.968 47.826 20.17 0.00 44.90 3.97
966 1002 3.929610 CGGGAAACTTTGAAGCTCTCTAG 59.070 47.826 0.00 0.00 0.00 2.43
967 1003 3.864921 GCGGGAAACTTTGAAGCTCTCTA 60.865 47.826 0.00 0.00 0.00 2.43
970 1006 1.239347 GCGGGAAACTTTGAAGCTCT 58.761 50.000 0.00 0.00 0.00 4.09
971 1007 0.951558 TGCGGGAAACTTTGAAGCTC 59.048 50.000 0.00 0.00 0.00 4.09
972 1008 0.954452 CTGCGGGAAACTTTGAAGCT 59.046 50.000 0.00 0.00 0.00 3.74
973 1009 0.664466 GCTGCGGGAAACTTTGAAGC 60.664 55.000 0.00 0.00 0.00 3.86
974 1010 0.667993 TGCTGCGGGAAACTTTGAAG 59.332 50.000 0.00 0.00 0.00 3.02
975 1011 0.383949 GTGCTGCGGGAAACTTTGAA 59.616 50.000 0.00 0.00 0.00 2.69
976 1012 1.781025 CGTGCTGCGGGAAACTTTGA 61.781 55.000 0.00 0.00 36.85 2.69
977 1013 1.370414 CGTGCTGCGGGAAACTTTG 60.370 57.895 0.00 0.00 36.85 2.77
978 1014 1.507141 CTCGTGCTGCGGGAAACTTT 61.507 55.000 0.00 0.00 45.67 2.66
989 1025 2.584418 CCGCCATCTCTCGTGCTG 60.584 66.667 0.00 0.00 0.00 4.41
993 1029 3.417275 CTTCGCCGCCATCTCTCGT 62.417 63.158 0.00 0.00 0.00 4.18
1240 1282 4.955450 AGTAGACAGATCTGAGCTTGTGAT 59.045 41.667 29.27 2.82 36.29 3.06
1284 1328 1.363080 GGAGTAATCGAGGTCGCCC 59.637 63.158 0.00 0.00 39.60 6.13
1288 1335 2.941720 ACTACACGGAGTAATCGAGGTC 59.058 50.000 0.00 0.00 41.61 3.85
1341 1390 6.377146 ACCAGGACCAATAATATGTCAAACAC 59.623 38.462 0.00 0.00 0.00 3.32
1344 1397 5.820423 CGACCAGGACCAATAATATGTCAAA 59.180 40.000 0.00 0.00 0.00 2.69
1349 1402 4.008074 AGCGACCAGGACCAATAATATG 57.992 45.455 0.00 0.00 0.00 1.78
1424 1498 2.287129 GCTAACGACAGCTACCTCTAGC 60.287 54.545 5.88 0.00 45.30 3.42
1452 1530 7.106439 ACTAACAGATCTGACACCTCAATAG 57.894 40.000 29.27 15.85 0.00 1.73
1481 1559 6.309009 CCAACTGCGCAAGTCATATATACTAG 59.691 42.308 13.05 0.00 38.56 2.57
1482 1560 6.015772 TCCAACTGCGCAAGTCATATATACTA 60.016 38.462 13.05 0.00 38.56 1.82
1483 1561 4.991056 CCAACTGCGCAAGTCATATATACT 59.009 41.667 13.05 0.00 38.56 2.12
1630 2051 9.823098 GACAAAGCAATCAAGCTCTATATAATG 57.177 33.333 0.00 0.00 45.89 1.90
1772 2244 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
1773 2245 1.229529 ATTGTGGGACGGAGGGAGT 60.230 57.895 0.00 0.00 0.00 3.85
1782 2254 4.184629 CAGTAGCTCTTACATTGTGGGAC 58.815 47.826 0.00 0.00 34.56 4.46
1787 2259 7.518370 CGTTTTTGACAGTAGCTCTTACATTGT 60.518 37.037 0.00 0.00 34.56 2.71
1790 2262 5.107065 GCGTTTTTGACAGTAGCTCTTACAT 60.107 40.000 0.00 0.00 34.56 2.29
1791 2263 4.210537 GCGTTTTTGACAGTAGCTCTTACA 59.789 41.667 0.00 0.00 34.56 2.41
1792 2264 4.448060 AGCGTTTTTGACAGTAGCTCTTAC 59.552 41.667 0.00 0.00 0.00 2.34
1793 2265 4.628074 AGCGTTTTTGACAGTAGCTCTTA 58.372 39.130 0.00 0.00 0.00 2.10
1795 2267 3.060602 GAGCGTTTTTGACAGTAGCTCT 58.939 45.455 7.22 0.00 44.18 4.09
1798 2270 3.879932 AAGAGCGTTTTTGACAGTAGC 57.120 42.857 0.00 0.00 0.00 3.58
1802 2274 8.070171 CCCATAATATAAGAGCGTTTTTGACAG 58.930 37.037 0.00 0.00 0.00 3.51
1803 2275 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
1804 2276 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
1805 2277 7.771361 TGTCCCATAATATAAGAGCGTTTTTGA 59.229 33.333 0.00 0.00 0.00 2.69
1806 2278 7.925993 TGTCCCATAATATAAGAGCGTTTTTG 58.074 34.615 0.00 0.00 0.00 2.44
1808 2280 9.436957 CTATGTCCCATAATATAAGAGCGTTTT 57.563 33.333 0.00 0.00 0.00 2.43
1811 2283 6.098409 CCCTATGTCCCATAATATAAGAGCGT 59.902 42.308 0.00 0.00 0.00 5.07
1812 2284 6.323996 TCCCTATGTCCCATAATATAAGAGCG 59.676 42.308 0.00 0.00 0.00 5.03
1813 2285 7.345914 ACTCCCTATGTCCCATAATATAAGAGC 59.654 40.741 0.00 0.00 0.00 4.09
1819 2291 8.772250 CAACATACTCCCTATGTCCCATAATAT 58.228 37.037 0.00 0.00 44.13 1.28
1820 2292 7.182026 CCAACATACTCCCTATGTCCCATAATA 59.818 40.741 0.00 0.00 44.13 0.98
1821 2293 6.012508 CCAACATACTCCCTATGTCCCATAAT 60.013 42.308 0.00 0.00 44.13 1.28
1822 2294 5.309543 CCAACATACTCCCTATGTCCCATAA 59.690 44.000 0.00 0.00 44.13 1.90
1823 2295 4.844085 CCAACATACTCCCTATGTCCCATA 59.156 45.833 0.00 0.00 44.13 2.74
1824 2296 3.652869 CCAACATACTCCCTATGTCCCAT 59.347 47.826 0.00 0.00 44.13 4.00
1825 2297 3.045634 CCAACATACTCCCTATGTCCCA 58.954 50.000 0.00 0.00 44.13 4.37
1826 2298 3.314693 TCCAACATACTCCCTATGTCCC 58.685 50.000 0.00 0.00 44.13 4.46
1827 2299 4.223953 TCTCCAACATACTCCCTATGTCC 58.776 47.826 0.00 0.00 44.13 4.02
1828 2300 4.896482 ACTCTCCAACATACTCCCTATGTC 59.104 45.833 0.00 0.00 44.13 3.06
1829 2301 4.884961 ACTCTCCAACATACTCCCTATGT 58.115 43.478 0.00 0.00 46.46 2.29
1830 2302 6.307776 TCTACTCTCCAACATACTCCCTATG 58.692 44.000 0.00 0.00 38.65 2.23
1831 2303 6.532119 TCTACTCTCCAACATACTCCCTAT 57.468 41.667 0.00 0.00 0.00 2.57
1832 2304 5.988865 TCTACTCTCCAACATACTCCCTA 57.011 43.478 0.00 0.00 0.00 3.53
1833 2305 4.883021 TCTACTCTCCAACATACTCCCT 57.117 45.455 0.00 0.00 0.00 4.20
1834 2306 7.005296 TCTAATCTACTCTCCAACATACTCCC 58.995 42.308 0.00 0.00 0.00 4.30
1835 2307 8.354426 GTTCTAATCTACTCTCCAACATACTCC 58.646 40.741 0.00 0.00 0.00 3.85
1836 2308 9.127277 AGTTCTAATCTACTCTCCAACATACTC 57.873 37.037 0.00 0.00 0.00 2.59
1837 2309 8.908903 CAGTTCTAATCTACTCTCCAACATACT 58.091 37.037 0.00 0.00 0.00 2.12
1838 2310 8.688151 ACAGTTCTAATCTACTCTCCAACATAC 58.312 37.037 0.00 0.00 0.00 2.39
1839 2311 8.824756 ACAGTTCTAATCTACTCTCCAACATA 57.175 34.615 0.00 0.00 0.00 2.29
1840 2312 7.726033 ACAGTTCTAATCTACTCTCCAACAT 57.274 36.000 0.00 0.00 0.00 2.71
1841 2313 7.451877 AGAACAGTTCTAATCTACTCTCCAACA 59.548 37.037 14.58 0.00 38.49 3.33
1842 2314 7.832769 AGAACAGTTCTAATCTACTCTCCAAC 58.167 38.462 14.58 0.00 38.49 3.77
1843 2315 8.423906 AAGAACAGTTCTAATCTACTCTCCAA 57.576 34.615 16.46 0.00 39.61 3.53
1844 2316 8.307483 CAAAGAACAGTTCTAATCTACTCTCCA 58.693 37.037 16.46 0.00 39.61 3.86
1849 2322 9.832445 TTTCACAAAGAACAGTTCTAATCTACT 57.168 29.630 16.46 0.00 39.61 2.57
1857 2330 7.280205 AGACGTAATTTCACAAAGAACAGTTCT 59.720 33.333 10.27 10.27 43.15 3.01
1880 2353 8.527810 AGAGCAAGCCTATCATATAACTAAGAC 58.472 37.037 0.00 0.00 0.00 3.01
1881 2354 8.657387 AGAGCAAGCCTATCATATAACTAAGA 57.343 34.615 0.00 0.00 0.00 2.10
1889 2365 5.549347 CAGTGAAGAGCAAGCCTATCATAT 58.451 41.667 0.00 0.00 0.00 1.78
1905 2393 1.933181 TCAACGAAGTGTGCAGTGAAG 59.067 47.619 0.00 0.00 45.00 3.02
2015 2554 3.006217 TCCATCATCAATCTGCTAGACCG 59.994 47.826 0.00 0.00 0.00 4.79
2017 2556 6.286758 TCTTTCCATCATCAATCTGCTAGAC 58.713 40.000 0.00 0.00 0.00 2.59
2018 2557 6.490241 TCTTTCCATCATCAATCTGCTAGA 57.510 37.500 0.00 0.00 0.00 2.43
2043 2582 1.949525 TCAGCAGAAAAGCACTTGGAC 59.050 47.619 0.00 0.00 36.85 4.02
2065 2654 3.134442 GCCCAAAGCCATCCATCATAAAA 59.866 43.478 0.00 0.00 34.35 1.52
2104 2706 4.370917 CCCAATTCCACTTCACAAAACAG 58.629 43.478 0.00 0.00 0.00 3.16
2206 3056 5.984926 TCAGATTGAAAACCATGAAAGCAAC 59.015 36.000 0.00 0.00 0.00 4.17
2273 3259 4.453136 GCCATGAACAAGCACATCAAAATT 59.547 37.500 0.00 0.00 0.00 1.82
2473 5454 6.705825 ACAGCATTGAATCCAAAAGGTTTTAC 59.294 34.615 0.00 0.00 35.67 2.01
2511 5519 3.833650 TCACAATGATTCAGCAAATGGGT 59.166 39.130 0.00 0.00 0.00 4.51
2528 5544 8.541133 TGTGATCTCGTTTACAATAATCACAA 57.459 30.769 11.60 0.00 44.89 3.33
2648 6160 3.843177 TTCCATTCCCCCTCATTTTCA 57.157 42.857 0.00 0.00 0.00 2.69
2669 6184 0.029300 GAGCAGCAAGTGTCGCAAAA 59.971 50.000 0.00 0.00 0.00 2.44
2681 6196 0.833287 GAGGGTCATTAGGAGCAGCA 59.167 55.000 0.00 0.00 45.90 4.41
2696 6211 8.912614 AAATGGGTATATAGTAACTAGGAGGG 57.087 38.462 0.00 0.00 0.00 4.30
2770 6294 3.243873 GGCAGGCTAATAAAAAGGGATGC 60.244 47.826 0.00 0.00 0.00 3.91
2816 6340 4.572389 AGACAACACTACAGCAGAAAACAG 59.428 41.667 0.00 0.00 0.00 3.16
2827 6351 1.946768 GGCAAAGCAGACAACACTACA 59.053 47.619 0.00 0.00 0.00 2.74
2828 6352 2.222027 AGGCAAAGCAGACAACACTAC 58.778 47.619 0.00 0.00 0.00 2.73
2831 6355 1.002033 CTGAGGCAAAGCAGACAACAC 60.002 52.381 0.00 0.00 34.06 3.32
2857 6398 9.401058 AGTTAAATCTCATGCTACTTGCTTAAT 57.599 29.630 0.00 0.00 43.37 1.40
2858 6399 8.792830 AGTTAAATCTCATGCTACTTGCTTAA 57.207 30.769 0.00 0.00 43.37 1.85
2859 6400 8.792830 AAGTTAAATCTCATGCTACTTGCTTA 57.207 30.769 0.00 0.00 43.37 3.09
2860 6401 7.693969 AAGTTAAATCTCATGCTACTTGCTT 57.306 32.000 0.00 0.00 43.37 3.91
2863 6404 9.897744 TCAAAAAGTTAAATCTCATGCTACTTG 57.102 29.630 0.00 0.00 0.00 3.16
2879 6420 8.920665 CACAAAACAGTTCATGTCAAAAAGTTA 58.079 29.630 2.45 0.00 43.00 2.24
3831 7657 3.336568 ATGGCAGCCTGGACAGCT 61.337 61.111 14.15 0.00 42.70 4.24
4614 8455 1.038130 CGACCTCCTCGATCTTGGGT 61.038 60.000 0.00 0.00 46.14 4.51
4654 8495 2.186384 CTTCTCCGCCTCTGCCAG 59.814 66.667 0.00 0.00 0.00 4.85
4701 8551 5.047306 CCACCACAACTAGTCTCAGATAACA 60.047 44.000 0.00 0.00 0.00 2.41
4779 8636 4.137543 GACCCATAATCCTGATGTTCCAC 58.862 47.826 0.00 0.00 0.00 4.02
4877 8737 5.191727 TGGAATGATTAACACACTCCCAT 57.808 39.130 8.72 0.00 0.00 4.00
4982 8842 7.282450 ACTTTATGGTTCATCCTCGAAAATACC 59.718 37.037 0.00 0.00 37.07 2.73
5023 9613 6.386654 CATTACCACCCACTGAATTAACAAC 58.613 40.000 0.00 0.00 0.00 3.32
5024 9614 5.047660 GCATTACCACCCACTGAATTAACAA 60.048 40.000 0.00 0.00 0.00 2.83
5061 9997 9.630098 ACTGAAAATCACAAGCATAAATTAGTG 57.370 29.630 0.00 0.00 0.00 2.74
5071 10007 1.340889 GGCCACTGAAAATCACAAGCA 59.659 47.619 0.00 0.00 0.00 3.91
5072 10008 1.615392 AGGCCACTGAAAATCACAAGC 59.385 47.619 5.01 0.00 0.00 4.01
5093 10029 5.409520 TCGATGGATGTTGCTGATAAATAGC 59.590 40.000 0.00 0.00 41.49 2.97
5094 10030 6.648310 ACTCGATGGATGTTGCTGATAAATAG 59.352 38.462 0.00 0.00 0.00 1.73
5280 10233 6.430000 AGCTTTGACCGTTATACTGAACAAAT 59.570 34.615 0.00 0.00 0.00 2.32
5312 10265 3.463944 ACTCGTCGACTTTTTGTTCCAT 58.536 40.909 14.70 0.00 0.00 3.41
5329 10282 3.927142 GTGAAGATTGTAGGTGGAACTCG 59.073 47.826 0.00 0.00 36.74 4.18
5332 10285 5.705441 TCATTGTGAAGATTGTAGGTGGAAC 59.295 40.000 0.00 0.00 0.00 3.62
5382 10335 2.539346 CTTGAAGAGCATTCAAGCGG 57.461 50.000 23.32 8.74 45.76 5.52
5509 10468 1.237285 AAGCGCTGCTGGGTTTACAG 61.237 55.000 12.58 0.00 39.62 2.74
5510 10469 1.228124 AAGCGCTGCTGGGTTTACA 60.228 52.632 12.58 0.00 39.62 2.41
5511 10470 1.210155 CAAGCGCTGCTGGGTTTAC 59.790 57.895 12.58 0.00 39.62 2.01
5512 10471 3.667087 CAAGCGCTGCTGGGTTTA 58.333 55.556 12.58 0.00 39.62 2.01
5595 10554 2.189521 GGTGTGTCCTATGCGGGG 59.810 66.667 0.00 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.