Multiple sequence alignment - TraesCS2B01G374300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G374300 chr2B 100.000 2720 0 0 1 2720 534384136 534381417 0.000000e+00 5024.0
1 TraesCS2B01G374300 chr2B 84.783 92 10 4 636 723 796778393 796778302 3.730000e-14 89.8
2 TraesCS2B01G374300 chr2A 91.694 1505 74 18 713 2203 595986158 595987625 0.000000e+00 2039.0
3 TraesCS2B01G374300 chr2A 92.617 298 18 3 2230 2527 595987610 595987903 2.500000e-115 425.0
4 TraesCS2B01G374300 chr2A 85.393 89 12 1 637 724 189018932 189018844 1.040000e-14 91.6
5 TraesCS2B01G374300 chr2A 100.000 35 0 0 2200 2234 54283813 54283847 6.290000e-07 65.8
6 TraesCS2B01G374300 chr2A 91.667 48 2 2 2193 2240 496375823 496375778 6.290000e-07 65.8
7 TraesCS2B01G374300 chr2D 93.555 1381 62 13 835 2203 454733010 454731645 0.000000e+00 2032.0
8 TraesCS2B01G374300 chr2D 92.246 374 23 5 2230 2602 454731660 454731292 2.400000e-145 525.0
9 TraesCS2B01G374300 chr3D 90.720 528 43 5 3 526 94862576 94862051 0.000000e+00 699.0
10 TraesCS2B01G374300 chr7D 90.341 528 45 6 3 526 566832019 566831494 0.000000e+00 688.0
11 TraesCS2B01G374300 chr6B 89.753 527 39 9 3 525 12967481 12966966 0.000000e+00 660.0
12 TraesCS2B01G374300 chr6B 89.184 527 53 3 3 526 648118521 648119046 0.000000e+00 654.0
13 TraesCS2B01G374300 chr5B 89.734 526 41 6 3 525 615593548 615593033 0.000000e+00 660.0
14 TraesCS2B01G374300 chr5B 89.374 527 41 9 3 525 461890726 461891241 0.000000e+00 649.0
15 TraesCS2B01G374300 chr5B 88.372 86 7 2 642 724 357102159 357102074 1.720000e-17 100.0
16 TraesCS2B01G374300 chr5B 88.889 81 7 2 637 716 590457342 590457263 6.200000e-17 99.0
17 TraesCS2B01G374300 chr7B 89.205 528 52 4 3 526 507002164 507002690 0.000000e+00 654.0
18 TraesCS2B01G374300 chr7B 89.184 527 53 3 3 526 691180936 691180411 0.000000e+00 654.0
19 TraesCS2B01G374300 chr1B 89.205 528 52 4 3 526 635367407 635366881 0.000000e+00 654.0
20 TraesCS2B01G374300 chr1B 97.368 38 0 1 2198 2234 402146859 402146896 2.260000e-06 63.9
21 TraesCS2B01G374300 chr1B 97.297 37 1 0 2198 2234 664059325 664059361 2.260000e-06 63.9
22 TraesCS2B01G374300 chr4D 93.590 78 5 0 527 604 337516544 337516621 1.710000e-22 117.0
23 TraesCS2B01G374300 chr5D 90.123 81 7 1 637 716 76023636 76023556 1.330000e-18 104.0
24 TraesCS2B01G374300 chr3A 86.957 92 11 1 626 716 550433867 550433958 4.790000e-18 102.0
25 TraesCS2B01G374300 chr1A 89.157 83 8 1 635 716 13490947 13491029 4.790000e-18 102.0
26 TraesCS2B01G374300 chr1A 93.182 44 3 0 2197 2240 447625942 447625899 6.290000e-07 65.8
27 TraesCS2B01G374300 chr1A 97.368 38 0 1 2198 2234 352854797 352854834 2.260000e-06 63.9
28 TraesCS2B01G374300 chr4B 90.278 72 6 1 637 707 31878680 31878751 2.880000e-15 93.5
29 TraesCS2B01G374300 chr4B 90.141 71 6 1 637 707 518087139 518087208 1.040000e-14 91.6
30 TraesCS2B01G374300 chr4B 90.000 50 2 3 2194 2240 149002894 149002845 8.130000e-06 62.1
31 TraesCS2B01G374300 chr5A 89.796 49 4 1 2192 2240 655604660 655604613 8.130000e-06 62.1
32 TraesCS2B01G374300 chr4A 94.872 39 2 0 2196 2234 323906544 323906582 8.130000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G374300 chr2B 534381417 534384136 2719 True 5024.0 5024 100.0000 1 2720 1 chr2B.!!$R1 2719
1 TraesCS2B01G374300 chr2A 595986158 595987903 1745 False 1232.0 2039 92.1555 713 2527 2 chr2A.!!$F2 1814
2 TraesCS2B01G374300 chr2D 454731292 454733010 1718 True 1278.5 2032 92.9005 835 2602 2 chr2D.!!$R1 1767
3 TraesCS2B01G374300 chr3D 94862051 94862576 525 True 699.0 699 90.7200 3 526 1 chr3D.!!$R1 523
4 TraesCS2B01G374300 chr7D 566831494 566832019 525 True 688.0 688 90.3410 3 526 1 chr7D.!!$R1 523
5 TraesCS2B01G374300 chr6B 12966966 12967481 515 True 660.0 660 89.7530 3 525 1 chr6B.!!$R1 522
6 TraesCS2B01G374300 chr6B 648118521 648119046 525 False 654.0 654 89.1840 3 526 1 chr6B.!!$F1 523
7 TraesCS2B01G374300 chr5B 615593033 615593548 515 True 660.0 660 89.7340 3 525 1 chr5B.!!$R3 522
8 TraesCS2B01G374300 chr5B 461890726 461891241 515 False 649.0 649 89.3740 3 525 1 chr5B.!!$F1 522
9 TraesCS2B01G374300 chr7B 507002164 507002690 526 False 654.0 654 89.2050 3 526 1 chr7B.!!$F1 523
10 TraesCS2B01G374300 chr7B 691180411 691180936 525 True 654.0 654 89.1840 3 526 1 chr7B.!!$R1 523
11 TraesCS2B01G374300 chr1B 635366881 635367407 526 True 654.0 654 89.2050 3 526 1 chr1B.!!$R1 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 634 0.039437 CGACTGGACGTTAGCACAGT 60.039 55.0 9.47 9.47 45.99 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2222 2246 0.17668 AAGCACGAGGGAGCTACATG 59.823 55.0 0.0 0.0 39.28 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 82 3.566322 TCCTGTGGTCAAAAACATTACCG 59.434 43.478 0.00 0.00 34.60 4.02
81 83 3.566322 CCTGTGGTCAAAAACATTACCGA 59.434 43.478 0.00 0.00 34.60 4.69
90 92 5.517054 TCAAAAACATTACCGAAGTGTTTGC 59.483 36.000 10.52 0.00 43.14 3.68
220 225 4.690748 CGGTGTTTGTGAGTGAGTTATCAT 59.309 41.667 0.00 0.00 37.87 2.45
252 259 7.710044 TGACGTAATTACCACACTCTTTTACAA 59.290 33.333 10.01 0.00 0.00 2.41
278 286 3.055385 AGCTATCGGGTGTGTTACAACAT 60.055 43.478 0.00 0.00 37.60 2.71
351 359 9.140286 GTATATGATGCACGAATTACTGTGTAT 57.860 33.333 7.82 7.82 42.83 2.29
420 429 5.459768 TGTTTTTCTAGTCGCGTATGTACA 58.540 37.500 5.77 0.00 0.00 2.90
457 466 5.917541 TCGATCTTCTTTGTAACCACAAC 57.082 39.130 0.00 0.00 44.28 3.32
473 482 4.204012 CCACAACTTAAAACCAGACCAGA 58.796 43.478 0.00 0.00 0.00 3.86
526 535 1.001764 TGAGTTCGACTCCCGCCTA 60.002 57.895 11.01 0.00 44.44 3.93
527 536 1.030488 TGAGTTCGACTCCCGCCTAG 61.030 60.000 11.01 0.00 44.44 3.02
528 537 0.747283 GAGTTCGACTCCCGCCTAGA 60.747 60.000 0.00 0.00 39.28 2.43
529 538 0.106619 AGTTCGACTCCCGCCTAGAT 60.107 55.000 0.00 0.00 38.37 1.98
530 539 0.311477 GTTCGACTCCCGCCTAGATC 59.689 60.000 0.00 0.00 38.37 2.75
531 540 1.164662 TTCGACTCCCGCCTAGATCG 61.165 60.000 0.00 0.00 38.37 3.69
532 541 1.892862 CGACTCCCGCCTAGATCGT 60.893 63.158 0.00 0.00 0.00 3.73
533 542 1.655329 GACTCCCGCCTAGATCGTG 59.345 63.158 0.00 0.00 0.00 4.35
534 543 1.076923 ACTCCCGCCTAGATCGTGT 60.077 57.895 0.00 0.00 0.00 4.49
535 544 1.360551 CTCCCGCCTAGATCGTGTG 59.639 63.158 0.00 0.00 0.00 3.82
536 545 2.279517 CCCGCCTAGATCGTGTGC 60.280 66.667 0.00 0.00 0.00 4.57
537 546 2.655364 CCGCCTAGATCGTGTGCG 60.655 66.667 12.79 12.79 44.47 5.34
538 547 2.655364 CGCCTAGATCGTGTGCGG 60.655 66.667 12.16 0.00 41.42 5.69
539 548 2.279517 GCCTAGATCGTGTGCGGG 60.280 66.667 0.00 0.00 38.89 6.13
540 549 2.782222 GCCTAGATCGTGTGCGGGA 61.782 63.158 0.00 0.00 38.89 5.14
541 550 1.360551 CCTAGATCGTGTGCGGGAG 59.639 63.158 0.00 0.00 38.89 4.30
542 551 1.360551 CTAGATCGTGTGCGGGAGG 59.639 63.158 0.00 0.00 38.89 4.30
543 552 2.076622 CTAGATCGTGTGCGGGAGGG 62.077 65.000 0.00 0.00 38.89 4.30
544 553 4.530857 GATCGTGTGCGGGAGGGG 62.531 72.222 0.00 0.00 38.89 4.79
559 568 3.648694 GGGGGAGGAGTGGATCAC 58.351 66.667 0.00 0.00 34.10 3.06
560 569 2.435693 GGGGGAGGAGTGGATCACG 61.436 68.421 0.00 0.00 39.64 4.35
561 570 1.381327 GGGGAGGAGTGGATCACGA 60.381 63.158 0.00 0.00 39.64 4.35
562 571 1.395826 GGGGAGGAGTGGATCACGAG 61.396 65.000 0.00 0.00 39.64 4.18
563 572 0.395862 GGGAGGAGTGGATCACGAGA 60.396 60.000 0.00 0.00 39.64 4.04
564 573 1.028905 GGAGGAGTGGATCACGAGAG 58.971 60.000 0.00 0.00 39.64 3.20
565 574 1.408961 GGAGGAGTGGATCACGAGAGA 60.409 57.143 0.00 0.00 39.64 3.10
566 575 2.582052 GAGGAGTGGATCACGAGAGAT 58.418 52.381 0.00 0.00 39.64 2.75
567 576 2.552315 GAGGAGTGGATCACGAGAGATC 59.448 54.545 0.00 0.00 42.89 2.75
568 577 1.265635 GGAGTGGATCACGAGAGATCG 59.734 57.143 0.00 0.00 44.21 3.69
569 578 0.665835 AGTGGATCACGAGAGATCGC 59.334 55.000 0.00 0.00 44.21 4.58
570 579 0.658829 GTGGATCACGAGAGATCGCG 60.659 60.000 0.00 0.00 44.21 5.87
571 580 1.727723 GGATCACGAGAGATCGCGC 60.728 63.158 0.00 0.00 44.21 6.86
572 581 2.051793 ATCACGAGAGATCGCGCG 60.052 61.111 26.76 26.76 42.87 6.86
573 582 4.888741 TCACGAGAGATCGCGCGC 62.889 66.667 27.95 23.91 42.87 6.86
587 596 4.162690 GCGCGGGATGGAAGGAGT 62.163 66.667 8.83 0.00 0.00 3.85
588 597 2.202932 CGCGGGATGGAAGGAGTG 60.203 66.667 0.00 0.00 0.00 3.51
589 598 2.190578 GCGGGATGGAAGGAGTGG 59.809 66.667 0.00 0.00 0.00 4.00
590 599 2.367202 GCGGGATGGAAGGAGTGGA 61.367 63.158 0.00 0.00 0.00 4.02
591 600 1.700042 GCGGGATGGAAGGAGTGGAT 61.700 60.000 0.00 0.00 0.00 3.41
592 601 0.394565 CGGGATGGAAGGAGTGGATC 59.605 60.000 0.00 0.00 0.00 3.36
593 602 1.511613 GGGATGGAAGGAGTGGATCA 58.488 55.000 0.00 0.00 0.00 2.92
594 603 1.141858 GGGATGGAAGGAGTGGATCAC 59.858 57.143 0.00 0.00 34.10 3.06
595 604 1.202580 GGATGGAAGGAGTGGATCACG 60.203 57.143 0.00 0.00 39.64 4.35
596 605 1.757118 GATGGAAGGAGTGGATCACGA 59.243 52.381 0.00 0.00 39.64 4.35
597 606 1.186200 TGGAAGGAGTGGATCACGAG 58.814 55.000 0.00 0.00 39.64 4.18
598 607 1.272480 TGGAAGGAGTGGATCACGAGA 60.272 52.381 0.00 0.00 39.64 4.04
599 608 1.407258 GGAAGGAGTGGATCACGAGAG 59.593 57.143 0.00 0.00 39.64 3.20
600 609 1.407258 GAAGGAGTGGATCACGAGAGG 59.593 57.143 0.00 0.00 39.64 3.69
601 610 0.626382 AGGAGTGGATCACGAGAGGA 59.374 55.000 0.00 0.00 39.64 3.71
602 611 1.216678 AGGAGTGGATCACGAGAGGAT 59.783 52.381 0.00 0.00 39.64 3.24
603 612 1.611491 GGAGTGGATCACGAGAGGATC 59.389 57.143 0.00 0.00 39.64 3.36
612 621 1.644372 CGAGAGGATCGTCGACTGG 59.356 63.158 14.70 0.00 46.62 4.00
613 622 0.810426 CGAGAGGATCGTCGACTGGA 60.810 60.000 14.70 4.69 46.62 3.86
614 623 0.658897 GAGAGGATCGTCGACTGGAC 59.341 60.000 14.70 1.54 42.67 4.02
622 631 2.721925 GTCGACTGGACGTTAGCAC 58.278 57.895 8.70 0.00 35.61 4.40
623 632 0.039798 GTCGACTGGACGTTAGCACA 60.040 55.000 8.70 0.00 35.61 4.57
624 633 0.240145 TCGACTGGACGTTAGCACAG 59.760 55.000 0.00 0.00 37.01 3.66
625 634 0.039437 CGACTGGACGTTAGCACAGT 60.039 55.000 9.47 9.47 45.99 3.55
626 635 3.888093 ACTGGACGTTAGCACAGTC 57.112 52.632 0.00 0.00 39.84 3.51
657 666 9.908152 AAAAATACTTCCTCCGTTTCAAAATAG 57.092 29.630 0.00 0.00 0.00 1.73
658 667 8.857694 AAATACTTCCTCCGTTTCAAAATAGA 57.142 30.769 0.00 0.00 0.00 1.98
659 668 9.462606 AAATACTTCCTCCGTTTCAAAATAGAT 57.537 29.630 0.00 0.00 0.00 1.98
661 670 7.845066 ACTTCCTCCGTTTCAAAATAGATAC 57.155 36.000 0.00 0.00 0.00 2.24
662 671 6.822170 ACTTCCTCCGTTTCAAAATAGATACC 59.178 38.462 0.00 0.00 0.00 2.73
663 672 6.555463 TCCTCCGTTTCAAAATAGATACCT 57.445 37.500 0.00 0.00 0.00 3.08
664 673 7.664552 TCCTCCGTTTCAAAATAGATACCTA 57.335 36.000 0.00 0.00 0.00 3.08
665 674 8.081517 TCCTCCGTTTCAAAATAGATACCTAA 57.918 34.615 0.00 0.00 0.00 2.69
666 675 8.711170 TCCTCCGTTTCAAAATAGATACCTAAT 58.289 33.333 0.00 0.00 0.00 1.73
667 676 9.338622 CCTCCGTTTCAAAATAGATACCTAATT 57.661 33.333 0.00 0.00 0.00 1.40
710 719 6.775594 AAGTTGGGTTATCTATTTTGGAGC 57.224 37.500 0.00 0.00 0.00 4.70
711 720 4.881850 AGTTGGGTTATCTATTTTGGAGCG 59.118 41.667 0.00 0.00 0.00 5.03
712 721 4.764050 TGGGTTATCTATTTTGGAGCGA 57.236 40.909 0.00 0.00 0.00 4.93
713 722 5.105567 TGGGTTATCTATTTTGGAGCGAA 57.894 39.130 0.00 0.00 0.00 4.70
714 723 5.123227 TGGGTTATCTATTTTGGAGCGAAG 58.877 41.667 0.00 0.00 0.00 3.79
723 732 7.054124 TCTATTTTGGAGCGAAGGAAATATGT 58.946 34.615 0.00 0.00 0.00 2.29
729 738 5.758296 TGGAGCGAAGGAAATATGTCATTAC 59.242 40.000 0.00 0.00 0.00 1.89
753 762 2.021262 TCTGCATCCCTAGGATCCAG 57.979 55.000 15.82 8.07 46.37 3.86
783 792 7.279313 GTCGGTAGAAATTTTGCTTGGAGTATA 59.721 37.037 0.00 0.00 0.00 1.47
794 803 9.679661 TTTTGCTTGGAGTATAGTAAATCATCA 57.320 29.630 0.00 0.00 0.00 3.07
795 804 9.851686 TTTGCTTGGAGTATAGTAAATCATCAT 57.148 29.630 0.00 0.00 0.00 2.45
796 805 9.851686 TTGCTTGGAGTATAGTAAATCATCATT 57.148 29.630 0.00 0.00 0.00 2.57
797 806 9.494271 TGCTTGGAGTATAGTAAATCATCATTC 57.506 33.333 0.00 0.00 0.00 2.67
798 807 9.494271 GCTTGGAGTATAGTAAATCATCATTCA 57.506 33.333 0.00 0.00 0.00 2.57
807 816 7.953158 AGTAAATCATCATTCATCAGGTACG 57.047 36.000 0.00 0.00 0.00 3.67
808 817 7.726216 AGTAAATCATCATTCATCAGGTACGA 58.274 34.615 0.00 0.00 0.00 3.43
814 823 0.738975 TTCATCAGGTACGAGCCGAG 59.261 55.000 1.50 0.00 0.00 4.63
888 898 0.321653 GGTCCGACTCAACCAGCATT 60.322 55.000 0.00 0.00 35.53 3.56
900 910 1.973281 CAGCATTGGCGAACCCACT 60.973 57.895 0.00 0.00 45.34 4.00
948 959 4.201822 CGAGCAAATACAAAACCCTAGCTC 60.202 45.833 0.00 0.00 41.71 4.09
957 968 3.704800 AAACCCTAGCTCCAACTCTTC 57.295 47.619 0.00 0.00 0.00 2.87
958 969 1.187087 ACCCTAGCTCCAACTCTTCG 58.813 55.000 0.00 0.00 0.00 3.79
1333 1345 4.918201 GCCGGCTCAAGATCCCCG 62.918 72.222 22.15 0.00 40.39 5.73
1648 1660 3.640000 CCGGCGGCAATGACGATC 61.640 66.667 14.82 1.86 45.34 3.69
1705 1717 1.362932 AGCAGAGGAGGGTAAAGAGGA 59.637 52.381 0.00 0.00 0.00 3.71
1713 1725 3.198200 GGAGGGTAAAGAGGAGAAGGAAC 59.802 52.174 0.00 0.00 0.00 3.62
1730 1742 2.430244 CGAGTAGTGGCGTGCGTT 60.430 61.111 0.00 0.00 0.00 4.84
1739 1751 1.160946 TGGCGTGCGTTGTGTGTATT 61.161 50.000 0.00 0.00 0.00 1.89
1802 1814 2.636830 GTCTGTGATATGGCACTGCTT 58.363 47.619 0.00 0.00 39.49 3.91
1809 1821 2.857186 TATGGCACTGCTTGTTCAGA 57.143 45.000 0.00 0.00 37.51 3.27
1833 1845 7.446931 AGACTGATCTGTGATCGTATATGAACT 59.553 37.037 10.29 0.00 32.29 3.01
1861 1873 9.992910 TTTCGATGAGTAATCAATTTTGATGAG 57.007 29.630 6.56 0.00 46.60 2.90
1862 1874 7.633621 TCGATGAGTAATCAATTTTGATGAGC 58.366 34.615 6.56 1.46 46.60 4.26
1889 1913 7.323656 GTGTTTTTATGTGTCCTTTCTCGATTG 59.676 37.037 0.00 0.00 0.00 2.67
1890 1914 5.545658 TTTATGTGTCCTTTCTCGATTGC 57.454 39.130 0.00 0.00 0.00 3.56
1915 1939 2.621407 GGGAATCTGGTTCTGGATGCAA 60.621 50.000 0.02 0.00 37.01 4.08
1977 2001 1.843368 ATAGTGCCTGCAATGCTTGT 58.157 45.000 6.82 0.00 0.00 3.16
1981 2005 0.970640 TGCCTGCAATGCTTGTTGAT 59.029 45.000 6.82 0.00 0.00 2.57
2024 2048 0.729116 CACCAGAGGCTAACATTGCG 59.271 55.000 0.00 0.00 0.00 4.85
2066 2090 7.599245 AGCTACAGTTAGTGTCTGTTTTATGTC 59.401 37.037 0.00 0.00 42.50 3.06
2080 2104 9.249053 TCTGTTTTATGTCTATGTTCTCTCTCT 57.751 33.333 0.00 0.00 0.00 3.10
2199 2223 1.867363 AACTATCCTCCCTCGTGCTT 58.133 50.000 0.00 0.00 0.00 3.91
2200 2224 1.404843 ACTATCCTCCCTCGTGCTTC 58.595 55.000 0.00 0.00 0.00 3.86
2201 2225 1.342076 ACTATCCTCCCTCGTGCTTCA 60.342 52.381 0.00 0.00 0.00 3.02
2202 2226 1.967066 CTATCCTCCCTCGTGCTTCAT 59.033 52.381 0.00 0.00 0.00 2.57
2203 2227 2.088104 ATCCTCCCTCGTGCTTCATA 57.912 50.000 0.00 0.00 0.00 2.15
2204 2228 1.860641 TCCTCCCTCGTGCTTCATAA 58.139 50.000 0.00 0.00 0.00 1.90
2205 2229 2.184533 TCCTCCCTCGTGCTTCATAAA 58.815 47.619 0.00 0.00 0.00 1.40
2206 2230 2.569853 TCCTCCCTCGTGCTTCATAAAA 59.430 45.455 0.00 0.00 0.00 1.52
2207 2231 3.008594 TCCTCCCTCGTGCTTCATAAAAA 59.991 43.478 0.00 0.00 0.00 1.94
2227 2251 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
2228 2252 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
2229 2253 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
2230 2254 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
2231 2255 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
2236 2260 4.427394 GTGCATGTAGCTCCCTCG 57.573 61.111 0.00 0.00 45.94 4.63
2237 2261 1.517832 GTGCATGTAGCTCCCTCGT 59.482 57.895 0.00 0.00 45.94 4.18
2238 2262 0.807667 GTGCATGTAGCTCCCTCGTG 60.808 60.000 0.00 0.00 45.94 4.35
2239 2263 1.884926 GCATGTAGCTCCCTCGTGC 60.885 63.158 0.00 0.00 41.15 5.34
2240 2264 1.819229 CATGTAGCTCCCTCGTGCT 59.181 57.895 0.00 0.00 41.56 4.40
2241 2265 0.176680 CATGTAGCTCCCTCGTGCTT 59.823 55.000 0.00 0.00 39.48 3.91
2242 2266 0.461961 ATGTAGCTCCCTCGTGCTTC 59.538 55.000 0.00 0.00 39.48 3.86
2243 2267 0.898326 TGTAGCTCCCTCGTGCTTCA 60.898 55.000 0.00 0.00 39.48 3.02
2318 2342 3.132160 CACTTGAGCTCTATGATGGCTG 58.868 50.000 16.19 0.00 36.37 4.85
2434 2458 3.654414 ACACTTTTAGTCCTGCTTCTCG 58.346 45.455 0.00 0.00 0.00 4.04
2474 2498 7.672983 ACAACCTATGTTCTACTGACAATTG 57.327 36.000 3.24 3.24 40.06 2.32
2479 2503 9.787435 ACCTATGTTCTACTGACAATTGTTTTA 57.213 29.630 13.36 3.82 0.00 1.52
2521 2545 1.538512 CAAATCGCAGGGATATGCCAG 59.461 52.381 16.46 8.79 43.49 4.85
2527 2551 2.551721 CGCAGGGATATGCCAGATTTCT 60.552 50.000 16.46 0.00 43.49 2.52
2528 2552 3.494332 GCAGGGATATGCCAGATTTCTT 58.506 45.455 16.46 0.00 40.43 2.52
2537 2561 1.827344 GCCAGATTTCTTTTCCCCAGG 59.173 52.381 0.00 0.00 0.00 4.45
2538 2562 2.823152 GCCAGATTTCTTTTCCCCAGGT 60.823 50.000 0.00 0.00 0.00 4.00
2543 2567 2.375014 TTCTTTTCCCCAGGTCCAAC 57.625 50.000 0.00 0.00 0.00 3.77
2606 2631 9.965902 AACTCCATGGGTAGATAATATGATTTC 57.034 33.333 13.02 0.00 0.00 2.17
2607 2632 9.343994 ACTCCATGGGTAGATAATATGATTTCT 57.656 33.333 13.02 0.00 0.00 2.52
2610 2635 9.964354 CCATGGGTAGATAATATGATTTCTTCA 57.036 33.333 2.85 0.00 39.12 3.02
2612 2637 9.678260 ATGGGTAGATAATATGATTTCTTCAGC 57.322 33.333 0.00 0.00 37.89 4.26
2613 2638 8.884323 TGGGTAGATAATATGATTTCTTCAGCT 58.116 33.333 0.00 0.00 37.89 4.24
2614 2639 9.160496 GGGTAGATAATATGATTTCTTCAGCTG 57.840 37.037 7.63 7.63 37.89 4.24
2615 2640 9.935241 GGTAGATAATATGATTTCTTCAGCTGA 57.065 33.333 13.74 13.74 37.89 4.26
2618 2643 9.842775 AGATAATATGATTTCTTCAGCTGAACA 57.157 29.630 25.16 20.16 37.89 3.18
2620 2645 7.934855 AATATGATTTCTTCAGCTGAACAGT 57.065 32.000 25.16 11.39 37.89 3.55
2621 2646 7.934855 ATATGATTTCTTCAGCTGAACAGTT 57.065 32.000 25.16 10.59 37.89 3.16
2622 2647 9.453572 AATATGATTTCTTCAGCTGAACAGTTA 57.546 29.630 25.16 11.37 37.89 2.24
2623 2648 7.934855 ATGATTTCTTCAGCTGAACAGTTAT 57.065 32.000 25.16 13.38 37.89 1.89
2625 2650 8.256611 TGATTTCTTCAGCTGAACAGTTATAC 57.743 34.615 25.16 11.73 0.00 1.47
2626 2651 7.334421 TGATTTCTTCAGCTGAACAGTTATACC 59.666 37.037 25.16 8.75 0.00 2.73
2627 2652 5.738619 TCTTCAGCTGAACAGTTATACCA 57.261 39.130 25.16 0.33 0.00 3.25
2628 2653 5.724328 TCTTCAGCTGAACAGTTATACCAG 58.276 41.667 25.16 10.88 0.00 4.00
2632 2657 4.606457 GCTGAACAGTTATACCAGCTTG 57.394 45.455 14.58 0.00 44.75 4.01
2633 2658 4.003648 GCTGAACAGTTATACCAGCTTGT 58.996 43.478 14.58 0.00 44.75 3.16
2634 2659 5.175859 GCTGAACAGTTATACCAGCTTGTA 58.824 41.667 14.58 0.00 44.75 2.41
2635 2660 5.817816 GCTGAACAGTTATACCAGCTTGTAT 59.182 40.000 14.33 14.33 44.75 2.29
2636 2661 6.018669 GCTGAACAGTTATACCAGCTTGTATC 60.019 42.308 13.39 1.69 44.75 2.24
2637 2662 7.182817 TGAACAGTTATACCAGCTTGTATCT 57.817 36.000 13.39 3.89 33.58 1.98
2638 2663 7.620880 TGAACAGTTATACCAGCTTGTATCTT 58.379 34.615 13.39 0.00 33.58 2.40
2639 2664 8.100791 TGAACAGTTATACCAGCTTGTATCTTT 58.899 33.333 13.39 2.44 33.58 2.52
2640 2665 8.863872 AACAGTTATACCAGCTTGTATCTTTT 57.136 30.769 13.39 3.65 33.58 2.27
2641 2666 8.863872 ACAGTTATACCAGCTTGTATCTTTTT 57.136 30.769 13.39 0.00 33.58 1.94
2642 2667 9.953565 ACAGTTATACCAGCTTGTATCTTTTTA 57.046 29.630 13.39 0.00 33.58 1.52
2647 2672 6.442513 ACCAGCTTGTATCTTTTTATCTGC 57.557 37.500 0.00 0.00 0.00 4.26
2648 2673 5.945784 ACCAGCTTGTATCTTTTTATCTGCA 59.054 36.000 0.00 0.00 0.00 4.41
2649 2674 6.434028 ACCAGCTTGTATCTTTTTATCTGCAA 59.566 34.615 0.00 0.00 0.00 4.08
2650 2675 7.039784 ACCAGCTTGTATCTTTTTATCTGCAAA 60.040 33.333 0.00 0.00 0.00 3.68
2651 2676 7.977853 CCAGCTTGTATCTTTTTATCTGCAAAT 59.022 33.333 0.00 0.00 0.00 2.32
2652 2677 8.804743 CAGCTTGTATCTTTTTATCTGCAAATG 58.195 33.333 0.00 0.00 0.00 2.32
2653 2678 8.526147 AGCTTGTATCTTTTTATCTGCAAATGT 58.474 29.630 0.00 0.00 0.00 2.71
2654 2679 8.801913 GCTTGTATCTTTTTATCTGCAAATGTC 58.198 33.333 0.00 0.00 0.00 3.06
2655 2680 9.844790 CTTGTATCTTTTTATCTGCAAATGTCA 57.155 29.630 0.00 0.00 0.00 3.58
2659 2684 8.712285 ATCTTTTTATCTGCAAATGTCATTGG 57.288 30.769 0.00 0.00 0.00 3.16
2660 2685 7.669427 TCTTTTTATCTGCAAATGTCATTGGT 58.331 30.769 0.00 0.00 0.00 3.67
2661 2686 7.814107 TCTTTTTATCTGCAAATGTCATTGGTC 59.186 33.333 0.00 0.00 0.00 4.02
2662 2687 6.839124 TTTATCTGCAAATGTCATTGGTCT 57.161 33.333 0.00 0.00 0.00 3.85
2663 2688 6.839124 TTATCTGCAAATGTCATTGGTCTT 57.161 33.333 0.00 0.00 0.00 3.01
2664 2689 4.508461 TCTGCAAATGTCATTGGTCTTG 57.492 40.909 0.00 0.00 0.00 3.02
2665 2690 3.890756 TCTGCAAATGTCATTGGTCTTGT 59.109 39.130 0.00 0.00 0.00 3.16
2666 2691 5.069318 TCTGCAAATGTCATTGGTCTTGTA 58.931 37.500 0.00 0.00 0.00 2.41
2667 2692 5.534278 TCTGCAAATGTCATTGGTCTTGTAA 59.466 36.000 0.00 0.00 0.00 2.41
2668 2693 6.040278 TCTGCAAATGTCATTGGTCTTGTAAA 59.960 34.615 0.00 0.00 0.00 2.01
2669 2694 5.982516 TGCAAATGTCATTGGTCTTGTAAAC 59.017 36.000 0.00 0.00 0.00 2.01
2670 2695 5.405269 GCAAATGTCATTGGTCTTGTAAACC 59.595 40.000 0.00 0.00 37.31 3.27
2671 2696 5.722021 AATGTCATTGGTCTTGTAAACCC 57.278 39.130 0.00 0.00 35.84 4.11
2672 2697 4.171878 TGTCATTGGTCTTGTAAACCCA 57.828 40.909 0.00 0.00 35.84 4.51
2673 2698 4.141287 TGTCATTGGTCTTGTAAACCCAG 58.859 43.478 0.00 0.00 35.84 4.45
2674 2699 4.141367 TGTCATTGGTCTTGTAAACCCAGA 60.141 41.667 0.00 0.00 35.84 3.86
2675 2700 4.215613 GTCATTGGTCTTGTAAACCCAGAC 59.784 45.833 0.00 0.00 35.84 3.51
2676 2701 2.943036 TGGTCTTGTAAACCCAGACC 57.057 50.000 16.49 16.49 46.61 3.85
2677 2702 2.943036 GGTCTTGTAAACCCAGACCA 57.057 50.000 17.68 0.00 45.94 4.02
2678 2703 3.217681 GGTCTTGTAAACCCAGACCAA 57.782 47.619 17.68 0.00 45.94 3.67
2679 2704 3.763057 GGTCTTGTAAACCCAGACCAAT 58.237 45.455 17.68 0.00 45.94 3.16
2680 2705 4.149598 GGTCTTGTAAACCCAGACCAATT 58.850 43.478 17.68 0.00 45.94 2.32
2681 2706 4.022329 GGTCTTGTAAACCCAGACCAATTG 60.022 45.833 17.68 0.00 45.94 2.32
2682 2707 4.825085 GTCTTGTAAACCCAGACCAATTGA 59.175 41.667 7.12 0.00 0.00 2.57
2683 2708 5.476945 GTCTTGTAAACCCAGACCAATTGAT 59.523 40.000 7.12 0.00 0.00 2.57
2684 2709 5.476599 TCTTGTAAACCCAGACCAATTGATG 59.523 40.000 7.12 2.75 0.00 3.07
2685 2710 4.735369 TGTAAACCCAGACCAATTGATGT 58.265 39.130 7.12 0.00 0.00 3.06
2686 2711 4.522405 TGTAAACCCAGACCAATTGATGTG 59.478 41.667 7.12 0.00 0.00 3.21
2687 2712 2.978156 ACCCAGACCAATTGATGTGT 57.022 45.000 7.12 0.00 0.00 3.72
2688 2713 4.380843 AACCCAGACCAATTGATGTGTA 57.619 40.909 7.12 0.00 0.00 2.90
2689 2714 3.686016 ACCCAGACCAATTGATGTGTAC 58.314 45.455 7.12 0.00 0.00 2.90
2690 2715 3.330701 ACCCAGACCAATTGATGTGTACT 59.669 43.478 7.12 0.00 0.00 2.73
2691 2716 3.691118 CCCAGACCAATTGATGTGTACTG 59.309 47.826 7.12 6.15 0.00 2.74
2692 2717 4.326826 CCAGACCAATTGATGTGTACTGT 58.673 43.478 7.12 0.00 0.00 3.55
2693 2718 4.761739 CCAGACCAATTGATGTGTACTGTT 59.238 41.667 7.12 0.00 0.00 3.16
2694 2719 5.937540 CCAGACCAATTGATGTGTACTGTTA 59.062 40.000 7.12 0.00 0.00 2.41
2695 2720 6.128282 CCAGACCAATTGATGTGTACTGTTAC 60.128 42.308 7.12 0.00 0.00 2.50
2696 2721 5.637810 AGACCAATTGATGTGTACTGTTACG 59.362 40.000 7.12 0.00 0.00 3.18
2697 2722 4.153475 ACCAATTGATGTGTACTGTTACGC 59.847 41.667 7.12 0.00 38.92 4.42
2713 2738 7.591006 CTGTTACGCAGGTAAATCTAAGAAA 57.409 36.000 0.00 0.00 40.16 2.52
2714 2739 7.966246 TGTTACGCAGGTAAATCTAAGAAAA 57.034 32.000 0.00 0.00 40.16 2.29
2715 2740 7.799784 TGTTACGCAGGTAAATCTAAGAAAAC 58.200 34.615 0.00 0.00 40.16 2.43
2716 2741 5.874895 ACGCAGGTAAATCTAAGAAAACC 57.125 39.130 0.00 0.00 0.00 3.27
2717 2742 5.557866 ACGCAGGTAAATCTAAGAAAACCT 58.442 37.500 0.00 0.00 37.84 3.50
2718 2743 5.642491 ACGCAGGTAAATCTAAGAAAACCTC 59.358 40.000 0.00 0.00 35.17 3.85
2719 2744 5.875359 CGCAGGTAAATCTAAGAAAACCTCT 59.125 40.000 0.00 0.00 35.17 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.758633 ATAAAGAGCATGGTAATATGTACGTC 57.241 34.615 0.00 0.00 0.00 4.34
80 82 2.405892 AACTCATGCGCAAACACTTC 57.594 45.000 17.11 0.00 0.00 3.01
81 83 3.753272 AGATAACTCATGCGCAAACACTT 59.247 39.130 17.11 5.02 0.00 3.16
90 92 6.309009 ACGCTATAAATCAGATAACTCATGCG 59.691 38.462 0.00 0.00 41.46 4.73
180 185 1.903860 ACCGTGCTAACTATTGACCCA 59.096 47.619 0.00 0.00 0.00 4.51
194 199 0.304705 CTCACTCACAAACACCGTGC 59.695 55.000 0.00 0.00 34.27 5.34
220 225 3.735240 GTGTGGTAATTACGTCACGAACA 59.265 43.478 18.76 9.13 33.25 3.18
252 259 5.347620 TGTAACACACCCGATAGCTTATT 57.652 39.130 0.00 0.00 0.00 1.40
377 386 4.524053 ACAAGTCGGTTTCCTTTCTTTCT 58.476 39.130 0.00 0.00 0.00 2.52
457 466 7.227512 GTCATATCCATCTGGTCTGGTTTTAAG 59.772 40.741 0.00 0.00 35.19 1.85
473 482 6.236409 GTCCATCATCACTTGTCATATCCAT 58.764 40.000 0.00 0.00 0.00 3.41
526 535 3.461773 CCCTCCCGCACACGATCT 61.462 66.667 0.00 0.00 43.93 2.75
527 536 4.530857 CCCCTCCCGCACACGATC 62.531 72.222 0.00 0.00 43.93 3.69
542 551 2.435693 CGTGATCCACTCCTCCCCC 61.436 68.421 0.00 0.00 31.34 5.40
543 552 1.381327 TCGTGATCCACTCCTCCCC 60.381 63.158 0.00 0.00 31.34 4.81
544 553 0.395862 TCTCGTGATCCACTCCTCCC 60.396 60.000 0.00 0.00 31.34 4.30
545 554 1.028905 CTCTCGTGATCCACTCCTCC 58.971 60.000 0.00 0.00 31.34 4.30
546 555 2.045561 TCTCTCGTGATCCACTCCTC 57.954 55.000 0.00 0.00 31.34 3.71
547 556 2.582052 GATCTCTCGTGATCCACTCCT 58.418 52.381 0.00 0.00 37.47 3.69
548 557 1.265635 CGATCTCTCGTGATCCACTCC 59.734 57.143 9.08 0.00 39.57 3.85
549 558 1.334599 GCGATCTCTCGTGATCCACTC 60.335 57.143 0.00 0.00 46.71 3.51
550 559 0.665835 GCGATCTCTCGTGATCCACT 59.334 55.000 0.00 0.00 46.71 4.00
551 560 3.171705 GCGATCTCTCGTGATCCAC 57.828 57.895 0.00 0.00 46.71 4.02
570 579 4.162690 ACTCCTTCCATCCCGCGC 62.163 66.667 0.00 0.00 0.00 6.86
571 580 2.202932 CACTCCTTCCATCCCGCG 60.203 66.667 0.00 0.00 0.00 6.46
572 581 1.700042 ATCCACTCCTTCCATCCCGC 61.700 60.000 0.00 0.00 0.00 6.13
573 582 0.394565 GATCCACTCCTTCCATCCCG 59.605 60.000 0.00 0.00 0.00 5.14
574 583 1.141858 GTGATCCACTCCTTCCATCCC 59.858 57.143 0.00 0.00 0.00 3.85
575 584 1.202580 CGTGATCCACTCCTTCCATCC 60.203 57.143 0.00 0.00 31.34 3.51
576 585 1.757118 TCGTGATCCACTCCTTCCATC 59.243 52.381 0.00 0.00 31.34 3.51
577 586 1.759445 CTCGTGATCCACTCCTTCCAT 59.241 52.381 0.00 0.00 31.34 3.41
578 587 1.186200 CTCGTGATCCACTCCTTCCA 58.814 55.000 0.00 0.00 31.34 3.53
579 588 1.407258 CTCTCGTGATCCACTCCTTCC 59.593 57.143 0.00 0.00 31.34 3.46
580 589 1.407258 CCTCTCGTGATCCACTCCTTC 59.593 57.143 0.00 0.00 31.34 3.46
581 590 1.006043 TCCTCTCGTGATCCACTCCTT 59.994 52.381 0.00 0.00 31.34 3.36
582 591 0.626382 TCCTCTCGTGATCCACTCCT 59.374 55.000 0.00 0.00 31.34 3.69
583 592 1.611491 GATCCTCTCGTGATCCACTCC 59.389 57.143 0.00 0.00 33.94 3.85
584 593 1.265635 CGATCCTCTCGTGATCCACTC 59.734 57.143 0.00 0.00 42.56 3.51
585 594 1.313772 CGATCCTCTCGTGATCCACT 58.686 55.000 0.00 0.00 42.56 4.00
586 595 3.855630 CGATCCTCTCGTGATCCAC 57.144 57.895 0.00 0.00 42.56 4.02
595 604 0.658897 GTCCAGTCGACGATCCTCTC 59.341 60.000 10.46 0.00 0.00 3.20
596 605 2.783228 GTCCAGTCGACGATCCTCT 58.217 57.895 10.46 0.00 0.00 3.69
604 613 0.039798 TGTGCTAACGTCCAGTCGAC 60.040 55.000 7.70 7.70 38.21 4.20
605 614 0.240145 CTGTGCTAACGTCCAGTCGA 59.760 55.000 0.00 0.00 34.70 4.20
606 615 0.039437 ACTGTGCTAACGTCCAGTCG 60.039 55.000 0.00 0.00 32.97 4.18
607 616 1.699343 GACTGTGCTAACGTCCAGTC 58.301 55.000 13.02 13.02 44.75 3.51
608 617 0.317479 GGACTGTGCTAACGTCCAGT 59.683 55.000 12.07 0.00 43.51 4.00
609 618 0.603569 AGGACTGTGCTAACGTCCAG 59.396 55.000 0.00 0.00 45.01 3.86
610 619 1.913778 TAGGACTGTGCTAACGTCCA 58.086 50.000 6.57 0.00 45.01 4.02
611 620 3.308438 TTTAGGACTGTGCTAACGTCC 57.692 47.619 19.50 0.00 43.95 4.79
631 640 9.908152 CTATTTTGAAACGGAGGAAGTATTTTT 57.092 29.630 0.00 0.00 0.00 1.94
632 641 9.292195 TCTATTTTGAAACGGAGGAAGTATTTT 57.708 29.630 0.00 0.00 0.00 1.82
633 642 8.857694 TCTATTTTGAAACGGAGGAAGTATTT 57.142 30.769 0.00 0.00 0.00 1.40
635 644 9.543783 GTATCTATTTTGAAACGGAGGAAGTAT 57.456 33.333 0.00 0.00 0.00 2.12
636 645 7.983484 GGTATCTATTTTGAAACGGAGGAAGTA 59.017 37.037 0.00 0.00 0.00 2.24
637 646 6.822170 GGTATCTATTTTGAAACGGAGGAAGT 59.178 38.462 0.00 0.00 0.00 3.01
638 647 7.048512 AGGTATCTATTTTGAAACGGAGGAAG 58.951 38.462 0.00 0.00 0.00 3.46
639 648 6.954232 AGGTATCTATTTTGAAACGGAGGAA 58.046 36.000 0.00 0.00 0.00 3.36
640 649 6.555463 AGGTATCTATTTTGAAACGGAGGA 57.445 37.500 0.00 0.00 0.00 3.71
641 650 8.904099 ATTAGGTATCTATTTTGAAACGGAGG 57.096 34.615 0.00 0.00 0.00 4.30
684 693 8.914011 GCTCCAAAATAGATAACCCAACTTTAT 58.086 33.333 0.00 0.00 0.00 1.40
685 694 7.066525 CGCTCCAAAATAGATAACCCAACTTTA 59.933 37.037 0.00 0.00 0.00 1.85
686 695 6.127730 CGCTCCAAAATAGATAACCCAACTTT 60.128 38.462 0.00 0.00 0.00 2.66
687 696 5.357032 CGCTCCAAAATAGATAACCCAACTT 59.643 40.000 0.00 0.00 0.00 2.66
688 697 4.881850 CGCTCCAAAATAGATAACCCAACT 59.118 41.667 0.00 0.00 0.00 3.16
689 698 4.879545 TCGCTCCAAAATAGATAACCCAAC 59.120 41.667 0.00 0.00 0.00 3.77
690 699 5.105567 TCGCTCCAAAATAGATAACCCAA 57.894 39.130 0.00 0.00 0.00 4.12
691 700 4.764050 TCGCTCCAAAATAGATAACCCA 57.236 40.909 0.00 0.00 0.00 4.51
692 701 4.515567 CCTTCGCTCCAAAATAGATAACCC 59.484 45.833 0.00 0.00 0.00 4.11
693 702 5.365619 TCCTTCGCTCCAAAATAGATAACC 58.634 41.667 0.00 0.00 0.00 2.85
694 703 6.920569 TTCCTTCGCTCCAAAATAGATAAC 57.079 37.500 0.00 0.00 0.00 1.89
695 704 9.793259 ATATTTCCTTCGCTCCAAAATAGATAA 57.207 29.630 0.00 0.00 0.00 1.75
696 705 9.219603 CATATTTCCTTCGCTCCAAAATAGATA 57.780 33.333 0.00 0.00 0.00 1.98
697 706 7.721399 ACATATTTCCTTCGCTCCAAAATAGAT 59.279 33.333 0.00 0.00 0.00 1.98
698 707 7.054124 ACATATTTCCTTCGCTCCAAAATAGA 58.946 34.615 0.00 0.00 0.00 1.98
699 708 7.012327 TGACATATTTCCTTCGCTCCAAAATAG 59.988 37.037 0.00 0.00 0.00 1.73
700 709 6.826231 TGACATATTTCCTTCGCTCCAAAATA 59.174 34.615 0.00 0.00 0.00 1.40
701 710 5.652014 TGACATATTTCCTTCGCTCCAAAAT 59.348 36.000 0.00 0.00 0.00 1.82
702 711 5.007034 TGACATATTTCCTTCGCTCCAAAA 58.993 37.500 0.00 0.00 0.00 2.44
703 712 4.584874 TGACATATTTCCTTCGCTCCAAA 58.415 39.130 0.00 0.00 0.00 3.28
704 713 4.214986 TGACATATTTCCTTCGCTCCAA 57.785 40.909 0.00 0.00 0.00 3.53
705 714 3.904800 TGACATATTTCCTTCGCTCCA 57.095 42.857 0.00 0.00 0.00 3.86
706 715 5.992217 AGTAATGACATATTTCCTTCGCTCC 59.008 40.000 0.00 0.00 0.00 4.70
707 716 7.224753 TCAAGTAATGACATATTTCCTTCGCTC 59.775 37.037 0.00 0.00 31.50 5.03
708 717 7.047891 TCAAGTAATGACATATTTCCTTCGCT 58.952 34.615 0.00 0.00 31.50 4.93
709 718 7.246674 TCAAGTAATGACATATTTCCTTCGC 57.753 36.000 0.00 0.00 31.50 4.70
710 719 9.265901 AGATCAAGTAATGACATATTTCCTTCG 57.734 33.333 0.00 0.00 41.93 3.79
712 721 8.844244 GCAGATCAAGTAATGACATATTTCCTT 58.156 33.333 0.00 0.00 41.93 3.36
713 722 7.994911 TGCAGATCAAGTAATGACATATTTCCT 59.005 33.333 0.00 0.00 41.93 3.36
714 723 8.158169 TGCAGATCAAGTAATGACATATTTCC 57.842 34.615 0.00 0.00 41.93 3.13
723 732 5.012458 CCTAGGGATGCAGATCAAGTAATGA 59.988 44.000 0.00 0.00 43.67 2.57
729 738 4.205065 GATCCTAGGGATGCAGATCAAG 57.795 50.000 9.46 0.00 43.27 3.02
753 762 4.499037 AGCAAAATTTCTACCGACCAAC 57.501 40.909 0.00 0.00 0.00 3.77
783 792 7.726216 TCGTACCTGATGAATGATGATTTACT 58.274 34.615 0.00 0.00 0.00 2.24
790 799 3.062763 GGCTCGTACCTGATGAATGATG 58.937 50.000 0.00 0.00 0.00 3.07
791 800 2.288457 CGGCTCGTACCTGATGAATGAT 60.288 50.000 0.00 0.00 0.00 2.45
793 802 1.067060 TCGGCTCGTACCTGATGAATG 59.933 52.381 0.00 0.00 0.00 2.67
794 803 1.338337 CTCGGCTCGTACCTGATGAAT 59.662 52.381 0.00 0.00 0.00 2.57
795 804 0.738975 CTCGGCTCGTACCTGATGAA 59.261 55.000 0.00 0.00 0.00 2.57
796 805 1.101635 CCTCGGCTCGTACCTGATGA 61.102 60.000 0.00 0.00 0.00 2.92
797 806 1.360551 CCTCGGCTCGTACCTGATG 59.639 63.158 0.00 0.00 0.00 3.07
798 807 1.076923 ACCTCGGCTCGTACCTGAT 60.077 57.895 0.00 0.00 0.00 2.90
799 808 2.044555 CACCTCGGCTCGTACCTGA 61.045 63.158 0.00 0.00 0.00 3.86
800 809 1.592400 TTCACCTCGGCTCGTACCTG 61.592 60.000 0.00 0.00 0.00 4.00
801 810 1.303888 TTCACCTCGGCTCGTACCT 60.304 57.895 0.00 0.00 0.00 3.08
802 811 1.153881 GTTCACCTCGGCTCGTACC 60.154 63.158 0.00 0.00 0.00 3.34
803 812 1.153881 GGTTCACCTCGGCTCGTAC 60.154 63.158 0.00 0.00 0.00 3.67
804 813 2.693762 CGGTTCACCTCGGCTCGTA 61.694 63.158 0.00 0.00 0.00 3.43
805 814 4.052229 CGGTTCACCTCGGCTCGT 62.052 66.667 0.00 0.00 0.00 4.18
814 823 2.032681 AAGAGCTGGCGGTTCACC 59.967 61.111 12.90 0.00 0.00 4.02
862 871 0.680061 GTTGAGTCGGACCAGGAAGT 59.320 55.000 4.14 0.00 0.00 3.01
905 915 1.102222 CGGGTTTGGGTTCGGTTGAA 61.102 55.000 0.00 0.00 0.00 2.69
948 959 1.001974 TGGGATGTGACGAAGAGTTGG 59.998 52.381 0.00 0.00 0.00 3.77
957 968 1.832883 TGGGAATTTGGGATGTGACG 58.167 50.000 0.00 0.00 0.00 4.35
958 969 3.578282 AGTTTGGGAATTTGGGATGTGAC 59.422 43.478 0.00 0.00 0.00 3.67
1077 1089 2.036256 GGGTGGTGCTTGAGCCAT 59.964 61.111 0.00 0.00 41.18 4.40
1494 1506 4.069232 TTCTCCACCAGCTCGGCG 62.069 66.667 0.00 0.00 39.03 6.46
1496 1508 2.125912 CGTTCTCCACCAGCTCGG 60.126 66.667 1.16 1.16 42.50 4.63
1497 1509 1.734477 CACGTTCTCCACCAGCTCG 60.734 63.158 0.00 0.00 0.00 5.03
1501 1513 1.301716 CCACCACGTTCTCCACCAG 60.302 63.158 0.00 0.00 0.00 4.00
1502 1514 2.825982 CCACCACGTTCTCCACCA 59.174 61.111 0.00 0.00 0.00 4.17
1542 1554 3.052082 CACTTCCTGGGCACGCAG 61.052 66.667 7.68 7.68 0.00 5.18
1690 1702 2.660556 TCCTTCTCCTCTTTACCCTCCT 59.339 50.000 0.00 0.00 0.00 3.69
1705 1717 0.526662 CGCCACTACTCGTTCCTTCT 59.473 55.000 0.00 0.00 0.00 2.85
1713 1725 2.430244 AACGCACGCCACTACTCG 60.430 61.111 0.00 0.00 0.00 4.18
1730 1742 2.222999 CGATGCGATGCAAATACACACA 60.223 45.455 0.00 0.00 43.62 3.72
1739 1751 1.223417 ATCGATGCGATGCGATGCAA 61.223 50.000 0.00 0.00 45.24 4.08
1771 1783 1.633774 ATCACAGACCGGACTGAAGT 58.366 50.000 35.19 18.95 40.63 3.01
1778 1790 0.464036 GTGCCATATCACAGACCGGA 59.536 55.000 9.46 0.00 36.97 5.14
1780 1792 1.575244 CAGTGCCATATCACAGACCG 58.425 55.000 0.00 0.00 39.35 4.79
1782 1794 2.322355 AGCAGTGCCATATCACAGAC 57.678 50.000 12.58 0.00 39.35 3.51
1809 1821 7.517614 AGTTCATATACGATCACAGATCAGT 57.482 36.000 7.67 8.22 0.00 3.41
1861 1873 4.855531 AGAAAGGACACATAAAAACACGC 58.144 39.130 0.00 0.00 0.00 5.34
1862 1874 5.050634 TCGAGAAAGGACACATAAAAACACG 60.051 40.000 0.00 0.00 0.00 4.49
1889 1913 1.753073 CCAGAACCAGATTCCCATTGC 59.247 52.381 0.00 0.00 38.16 3.56
1890 1914 3.370840 TCCAGAACCAGATTCCCATTG 57.629 47.619 0.00 0.00 38.16 2.82
1915 1939 4.827284 CCCGAACTATTTATTCCAGGCAAT 59.173 41.667 0.00 0.00 0.00 3.56
1981 2005 1.000646 TGCCTGATGAATGCCTGCA 60.001 52.632 0.00 0.00 0.00 4.41
2024 2048 1.826385 AGCTCAATACACCAACCAGC 58.174 50.000 0.00 0.00 0.00 4.85
2066 2090 7.967854 CACACTAACTGAAGAGAGAGAACATAG 59.032 40.741 0.00 0.00 0.00 2.23
2080 2104 7.618502 ACATAAAACACACACACTAACTGAA 57.381 32.000 0.00 0.00 0.00 3.02
2204 2228 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
2205 2229 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
2206 2230 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
2207 2231 1.909781 CATGCACCAGGTTGCCCTT 60.910 57.895 10.46 0.00 42.25 3.95
2208 2232 1.788518 TACATGCACCAGGTTGCCCT 61.789 55.000 10.46 0.00 42.25 5.19
2209 2233 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
2210 2234 1.937546 GCTACATGCACCAGGTTGCC 61.938 60.000 10.46 0.00 39.88 4.52
2211 2235 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
2212 2236 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
2213 2237 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
2219 2243 0.807667 CACGAGGGAGCTACATGCAC 60.808 60.000 0.00 0.00 45.94 4.57
2220 2244 1.517361 CACGAGGGAGCTACATGCA 59.483 57.895 0.00 0.00 45.94 3.96
2221 2245 1.884926 GCACGAGGGAGCTACATGC 60.885 63.158 0.00 0.00 43.29 4.06
2222 2246 0.176680 AAGCACGAGGGAGCTACATG 59.823 55.000 0.00 0.00 39.28 3.21
2223 2247 0.461961 GAAGCACGAGGGAGCTACAT 59.538 55.000 0.00 0.00 39.28 2.29
2224 2248 0.898326 TGAAGCACGAGGGAGCTACA 60.898 55.000 0.00 0.00 39.28 2.74
2225 2249 0.461961 ATGAAGCACGAGGGAGCTAC 59.538 55.000 0.00 0.00 39.28 3.58
2226 2250 0.747255 GATGAAGCACGAGGGAGCTA 59.253 55.000 0.00 0.00 39.28 3.32
2227 2251 1.260538 TGATGAAGCACGAGGGAGCT 61.261 55.000 0.00 0.00 42.15 4.09
2228 2252 0.179062 ATGATGAAGCACGAGGGAGC 60.179 55.000 0.00 0.00 0.00 4.70
2229 2253 1.938577 CAATGATGAAGCACGAGGGAG 59.061 52.381 0.00 0.00 0.00 4.30
2230 2254 1.407299 CCAATGATGAAGCACGAGGGA 60.407 52.381 0.00 0.00 0.00 4.20
2231 2255 1.019673 CCAATGATGAAGCACGAGGG 58.980 55.000 0.00 0.00 0.00 4.30
2232 2256 2.028420 TCCAATGATGAAGCACGAGG 57.972 50.000 0.00 0.00 0.00 4.63
2233 2257 4.424061 TTTTCCAATGATGAAGCACGAG 57.576 40.909 0.00 0.00 0.00 4.18
2234 2258 5.389859 AATTTTCCAATGATGAAGCACGA 57.610 34.783 0.00 0.00 0.00 4.35
2235 2259 5.634439 TCAAATTTTCCAATGATGAAGCACG 59.366 36.000 0.00 0.00 0.00 5.34
2236 2260 7.605410 ATCAAATTTTCCAATGATGAAGCAC 57.395 32.000 0.00 0.00 31.60 4.40
2237 2261 9.153721 GTTATCAAATTTTCCAATGATGAAGCA 57.846 29.630 0.00 0.00 34.54 3.91
2238 2262 8.606602 GGTTATCAAATTTTCCAATGATGAAGC 58.393 33.333 0.00 0.00 34.54 3.86
2239 2263 9.880157 AGGTTATCAAATTTTCCAATGATGAAG 57.120 29.630 0.00 0.00 34.54 3.02
2318 2342 7.548196 TCCATCAATCAACGGATAACTAAAC 57.452 36.000 0.00 0.00 32.09 2.01
2434 2458 4.833390 AGGTTGTAGCCAGAACATTCTAC 58.167 43.478 0.00 0.00 35.34 2.59
2488 2512 4.358851 CTGCGATTTGAAAAACAACCTCA 58.641 39.130 0.00 0.00 38.29 3.86
2497 2521 3.068024 GGCATATCCCTGCGATTTGAAAA 59.932 43.478 0.00 0.00 43.23 2.29
2502 2526 1.421268 TCTGGCATATCCCTGCGATTT 59.579 47.619 0.00 0.00 43.23 2.17
2503 2527 1.059098 TCTGGCATATCCCTGCGATT 58.941 50.000 0.00 0.00 43.23 3.34
2506 2530 1.808945 GAAATCTGGCATATCCCTGCG 59.191 52.381 0.00 0.00 43.23 5.18
2521 2545 3.169512 TGGACCTGGGGAAAAGAAATC 57.830 47.619 0.00 0.00 0.00 2.17
2527 2551 1.203125 GGATGTTGGACCTGGGGAAAA 60.203 52.381 0.00 0.00 0.00 2.29
2528 2552 0.407918 GGATGTTGGACCTGGGGAAA 59.592 55.000 0.00 0.00 0.00 3.13
2537 2561 7.552687 TCAGTAACTTCATATTGGATGTTGGAC 59.447 37.037 0.00 0.00 36.30 4.02
2538 2562 7.629157 TCAGTAACTTCATATTGGATGTTGGA 58.371 34.615 0.00 0.00 36.30 3.53
2568 2593 4.717280 ACCCATGGAGTTTAACACCAAAAA 59.283 37.500 17.34 0.00 42.00 1.94
2573 2598 4.563140 TCTACCCATGGAGTTTAACACC 57.437 45.455 15.22 4.61 0.00 4.16
2584 2609 9.964354 TGAAGAAATCATATTATCTACCCATGG 57.036 33.333 4.14 4.14 31.50 3.66
2602 2627 7.168219 TGGTATAACTGTTCAGCTGAAGAAAT 58.832 34.615 29.13 20.81 34.27 2.17
2603 2628 6.530120 TGGTATAACTGTTCAGCTGAAGAAA 58.470 36.000 29.13 15.86 34.27 2.52
2604 2629 6.109156 TGGTATAACTGTTCAGCTGAAGAA 57.891 37.500 29.13 18.77 34.27 2.52
2605 2630 5.724328 CTGGTATAACTGTTCAGCTGAAGA 58.276 41.667 29.13 26.09 34.27 2.87
2606 2631 4.331168 GCTGGTATAACTGTTCAGCTGAAG 59.669 45.833 29.13 20.47 45.03 3.02
2607 2632 4.253685 GCTGGTATAACTGTTCAGCTGAA 58.746 43.478 25.16 25.16 45.03 3.02
2608 2633 3.861840 GCTGGTATAACTGTTCAGCTGA 58.138 45.455 13.74 13.74 45.03 4.26
2612 2637 7.268586 AGATACAAGCTGGTATAACTGTTCAG 58.731 38.462 13.96 0.00 34.22 3.02
2613 2638 7.182817 AGATACAAGCTGGTATAACTGTTCA 57.817 36.000 13.96 0.00 34.22 3.18
2614 2639 8.494016 AAAGATACAAGCTGGTATAACTGTTC 57.506 34.615 13.96 0.85 34.22 3.18
2615 2640 8.863872 AAAAGATACAAGCTGGTATAACTGTT 57.136 30.769 13.96 6.64 34.22 3.16
2616 2641 8.863872 AAAAAGATACAAGCTGGTATAACTGT 57.136 30.769 13.96 0.51 34.22 3.55
2621 2646 9.273016 GCAGATAAAAAGATACAAGCTGGTATA 57.727 33.333 13.96 0.00 34.22 1.47
2622 2647 7.775093 TGCAGATAAAAAGATACAAGCTGGTAT 59.225 33.333 13.87 13.87 36.70 2.73
2623 2648 7.109501 TGCAGATAAAAAGATACAAGCTGGTA 58.890 34.615 2.71 2.71 0.00 3.25
2624 2649 5.945784 TGCAGATAAAAAGATACAAGCTGGT 59.054 36.000 0.00 0.00 0.00 4.00
2625 2650 6.441093 TGCAGATAAAAAGATACAAGCTGG 57.559 37.500 0.00 0.00 0.00 4.85
2626 2651 8.804743 CATTTGCAGATAAAAAGATACAAGCTG 58.195 33.333 0.00 0.00 0.00 4.24
2627 2652 8.526147 ACATTTGCAGATAAAAAGATACAAGCT 58.474 29.630 0.00 0.00 0.00 3.74
2628 2653 8.693542 ACATTTGCAGATAAAAAGATACAAGC 57.306 30.769 0.00 0.00 0.00 4.01
2629 2654 9.844790 TGACATTTGCAGATAAAAAGATACAAG 57.155 29.630 0.00 0.00 0.00 3.16
2633 2658 9.806203 CCAATGACATTTGCAGATAAAAAGATA 57.194 29.630 0.00 0.00 0.00 1.98
2634 2659 8.316214 ACCAATGACATTTGCAGATAAAAAGAT 58.684 29.630 0.00 0.00 0.00 2.40
2635 2660 7.669427 ACCAATGACATTTGCAGATAAAAAGA 58.331 30.769 0.00 0.00 0.00 2.52
2636 2661 7.816031 AGACCAATGACATTTGCAGATAAAAAG 59.184 33.333 0.00 0.00 0.00 2.27
2637 2662 7.669427 AGACCAATGACATTTGCAGATAAAAA 58.331 30.769 0.00 0.00 0.00 1.94
2638 2663 7.230849 AGACCAATGACATTTGCAGATAAAA 57.769 32.000 0.00 0.00 0.00 1.52
2639 2664 6.839124 AGACCAATGACATTTGCAGATAAA 57.161 33.333 0.00 0.00 0.00 1.40
2640 2665 6.209192 ACAAGACCAATGACATTTGCAGATAA 59.791 34.615 0.00 0.00 0.00 1.75
2641 2666 5.711506 ACAAGACCAATGACATTTGCAGATA 59.288 36.000 0.00 0.00 0.00 1.98
2642 2667 4.525487 ACAAGACCAATGACATTTGCAGAT 59.475 37.500 0.00 0.00 0.00 2.90
2643 2668 3.890756 ACAAGACCAATGACATTTGCAGA 59.109 39.130 0.00 0.00 0.00 4.26
2644 2669 4.247267 ACAAGACCAATGACATTTGCAG 57.753 40.909 0.00 0.00 0.00 4.41
2645 2670 5.781210 TTACAAGACCAATGACATTTGCA 57.219 34.783 0.00 0.00 0.00 4.08
2646 2671 5.405269 GGTTTACAAGACCAATGACATTTGC 59.595 40.000 0.00 0.00 37.14 3.68
2647 2672 5.925969 GGGTTTACAAGACCAATGACATTTG 59.074 40.000 0.00 0.00 38.98 2.32
2648 2673 5.600484 TGGGTTTACAAGACCAATGACATTT 59.400 36.000 0.00 0.00 38.98 2.32
2649 2674 5.144100 TGGGTTTACAAGACCAATGACATT 58.856 37.500 0.00 0.00 38.98 2.71
2650 2675 4.735369 TGGGTTTACAAGACCAATGACAT 58.265 39.130 0.00 0.00 38.98 3.06
2651 2676 4.141287 CTGGGTTTACAAGACCAATGACA 58.859 43.478 0.00 0.00 38.98 3.58
2652 2677 4.215613 GTCTGGGTTTACAAGACCAATGAC 59.784 45.833 0.00 0.00 38.98 3.06
2653 2678 4.394729 GTCTGGGTTTACAAGACCAATGA 58.605 43.478 0.00 0.00 38.98 2.57
2654 2679 3.506067 GGTCTGGGTTTACAAGACCAATG 59.494 47.826 20.51 0.00 45.94 2.82
2655 2680 3.763057 GGTCTGGGTTTACAAGACCAAT 58.237 45.455 20.51 0.00 45.94 3.16
2656 2681 3.217681 GGTCTGGGTTTACAAGACCAA 57.782 47.619 20.51 0.00 45.94 3.67
2657 2682 2.943036 GGTCTGGGTTTACAAGACCA 57.057 50.000 20.51 2.43 45.94 4.02
2658 2683 2.943036 TGGTCTGGGTTTACAAGACC 57.057 50.000 19.41 19.41 46.61 3.85
2659 2684 4.825085 TCAATTGGTCTGGGTTTACAAGAC 59.175 41.667 5.42 6.47 0.00 3.01
2660 2685 5.055265 TCAATTGGTCTGGGTTTACAAGA 57.945 39.130 5.42 0.00 0.00 3.02
2661 2686 5.243730 ACATCAATTGGTCTGGGTTTACAAG 59.756 40.000 5.42 0.00 0.00 3.16
2662 2687 5.010516 CACATCAATTGGTCTGGGTTTACAA 59.989 40.000 5.42 0.00 0.00 2.41
2663 2688 4.522405 CACATCAATTGGTCTGGGTTTACA 59.478 41.667 5.42 0.00 0.00 2.41
2664 2689 4.522789 ACACATCAATTGGTCTGGGTTTAC 59.477 41.667 5.42 0.00 0.00 2.01
2665 2690 4.735369 ACACATCAATTGGTCTGGGTTTA 58.265 39.130 5.42 0.00 0.00 2.01
2666 2691 3.575805 ACACATCAATTGGTCTGGGTTT 58.424 40.909 5.42 0.00 0.00 3.27
2667 2692 3.243359 ACACATCAATTGGTCTGGGTT 57.757 42.857 5.42 0.00 0.00 4.11
2668 2693 2.978156 ACACATCAATTGGTCTGGGT 57.022 45.000 5.42 5.69 0.00 4.51
2669 2694 3.691118 CAGTACACATCAATTGGTCTGGG 59.309 47.826 5.42 5.06 0.00 4.45
2670 2695 4.326826 ACAGTACACATCAATTGGTCTGG 58.673 43.478 5.42 0.00 0.00 3.86
2671 2696 5.947228 AACAGTACACATCAATTGGTCTG 57.053 39.130 5.42 4.27 0.00 3.51
2672 2697 5.637810 CGTAACAGTACACATCAATTGGTCT 59.362 40.000 5.42 0.00 0.00 3.85
2673 2698 5.670341 GCGTAACAGTACACATCAATTGGTC 60.670 44.000 5.42 0.00 0.00 4.02
2674 2699 4.153475 GCGTAACAGTACACATCAATTGGT 59.847 41.667 5.42 0.00 0.00 3.67
2675 2700 4.153296 TGCGTAACAGTACACATCAATTGG 59.847 41.667 5.42 0.00 0.00 3.16
2676 2701 5.276240 TGCGTAACAGTACACATCAATTG 57.724 39.130 0.00 0.00 0.00 2.32
2677 2702 4.391830 CCTGCGTAACAGTACACATCAATT 59.608 41.667 0.00 0.00 45.68 2.32
2678 2703 3.932710 CCTGCGTAACAGTACACATCAAT 59.067 43.478 0.00 0.00 45.68 2.57
2679 2704 3.243941 ACCTGCGTAACAGTACACATCAA 60.244 43.478 0.00 0.00 45.68 2.57
2680 2705 2.297880 ACCTGCGTAACAGTACACATCA 59.702 45.455 0.00 0.00 45.68 3.07
2681 2706 2.955614 ACCTGCGTAACAGTACACATC 58.044 47.619 0.00 0.00 45.68 3.06
2682 2707 4.524316 TTACCTGCGTAACAGTACACAT 57.476 40.909 0.00 0.00 45.68 3.21
2683 2708 4.319139 TTTACCTGCGTAACAGTACACA 57.681 40.909 0.00 0.00 45.68 3.72
2684 2709 5.166398 AGATTTACCTGCGTAACAGTACAC 58.834 41.667 0.00 0.00 45.68 2.90
2685 2710 5.395682 AGATTTACCTGCGTAACAGTACA 57.604 39.130 0.00 0.00 45.68 2.90
2686 2711 7.253422 TCTTAGATTTACCTGCGTAACAGTAC 58.747 38.462 0.00 0.00 45.68 2.73
2687 2712 7.395190 TCTTAGATTTACCTGCGTAACAGTA 57.605 36.000 0.00 0.00 45.68 2.74
2688 2713 6.276832 TCTTAGATTTACCTGCGTAACAGT 57.723 37.500 0.00 0.00 45.68 3.55
2689 2714 7.591006 TTTCTTAGATTTACCTGCGTAACAG 57.409 36.000 0.00 0.00 46.77 3.16
2690 2715 7.095102 GGTTTTCTTAGATTTACCTGCGTAACA 60.095 37.037 0.00 0.00 34.15 2.41
2691 2716 7.118825 AGGTTTTCTTAGATTTACCTGCGTAAC 59.881 37.037 8.86 0.00 34.15 2.50
2692 2717 7.163441 AGGTTTTCTTAGATTTACCTGCGTAA 58.837 34.615 8.86 0.00 34.84 3.18
2693 2718 6.704310 AGGTTTTCTTAGATTTACCTGCGTA 58.296 36.000 8.86 0.00 34.84 4.42
2694 2719 5.557866 AGGTTTTCTTAGATTTACCTGCGT 58.442 37.500 8.86 0.00 34.84 5.24
2695 2720 5.875359 AGAGGTTTTCTTAGATTTACCTGCG 59.125 40.000 12.89 0.00 36.20 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.