Multiple sequence alignment - TraesCS2B01G374200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G374200 chr2B 100.000 2660 0 0 1 2660 534245752 534243093 0.000000e+00 4913
1 TraesCS2B01G374200 chr1B 94.880 1836 92 2 827 2660 678554978 678556813 0.000000e+00 2868
2 TraesCS2B01G374200 chr1B 89.800 1804 154 17 864 2660 394907042 394908822 0.000000e+00 2285
3 TraesCS2B01G374200 chr1B 78.753 433 90 2 2229 2660 449370086 449370517 3.350000e-74 289
4 TraesCS2B01G374200 chr3B 90.380 1840 152 15 826 2660 810139481 810141300 0.000000e+00 2394
5 TraesCS2B01G374200 chr3B 85.616 146 16 5 13 156 7743897 7744039 5.930000e-32 148
6 TraesCS2B01G374200 chr3B 85.616 146 16 5 13 156 7750479 7750621 5.930000e-32 148
7 TraesCS2B01G374200 chr4B 90.940 1755 150 5 908 2660 621966700 621968447 0.000000e+00 2351
8 TraesCS2B01G374200 chr1A 83.216 1841 290 16 827 2660 341018991 341020819 0.000000e+00 1670
9 TraesCS2B01G374200 chr2D 84.586 1038 153 7 827 1861 71256096 71255063 0.000000e+00 1024
10 TraesCS2B01G374200 chr2D 81.141 806 127 9 1857 2660 71245946 71245164 8.090000e-175 623
11 TraesCS2B01G374200 chr2D 83.664 453 72 2 2209 2660 155158861 155158410 2.450000e-115 425
12 TraesCS2B01G374200 chr2D 84.416 154 20 4 7 159 71776859 71776709 5.930000e-32 148
13 TraesCS2B01G374200 chr3A 81.783 774 124 11 1889 2660 63453529 63454287 1.340000e-177 632
14 TraesCS2B01G374200 chr2A 82.393 585 82 13 4 571 595991676 595992256 8.560000e-135 490
15 TraesCS2B01G374200 chr2A 84.557 395 48 9 10 396 596467595 596467206 1.930000e-101 379
16 TraesCS2B01G374200 chr2A 90.000 170 13 3 639 808 54001403 54001568 1.600000e-52 217
17 TraesCS2B01G374200 chr6D 91.617 167 12 2 643 808 462491271 462491436 2.060000e-56 230
18 TraesCS2B01G374200 chr6D 86.911 191 22 3 621 811 162264022 162264209 7.460000e-51 211
19 TraesCS2B01G374200 chr5B 91.566 166 12 2 643 808 320410914 320411077 7.410000e-56 228
20 TraesCS2B01G374200 chr6A 91.018 167 13 2 643 808 373666585 373666750 9.580000e-55 224
21 TraesCS2B01G374200 chrUn 90.419 167 14 2 643 808 291810655 291810820 4.460000e-53 219
22 TraesCS2B01G374200 chrUn 90.854 164 13 2 646 808 362620662 362620500 4.460000e-53 219
23 TraesCS2B01G374200 chr5A 90.854 164 13 2 646 808 31629900 31629738 4.460000e-53 219
24 TraesCS2B01G374200 chr5A 90.854 164 13 2 646 808 31663917 31663755 4.460000e-53 219
25 TraesCS2B01G374200 chr7A 86.577 149 16 4 7 154 652994320 652994175 7.620000e-36 161
26 TraesCS2B01G374200 chr3D 83.060 183 25 5 4 184 14073694 14073872 7.620000e-36 161
27 TraesCS2B01G374200 chr7B 84.564 149 19 4 7 154 620587360 620587505 7.670000e-31 145
28 TraesCS2B01G374200 chr7D 83.553 152 21 4 10 160 566829616 566829468 3.570000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G374200 chr2B 534243093 534245752 2659 True 4913 4913 100.000 1 2660 1 chr2B.!!$R1 2659
1 TraesCS2B01G374200 chr1B 678554978 678556813 1835 False 2868 2868 94.880 827 2660 1 chr1B.!!$F3 1833
2 TraesCS2B01G374200 chr1B 394907042 394908822 1780 False 2285 2285 89.800 864 2660 1 chr1B.!!$F1 1796
3 TraesCS2B01G374200 chr3B 810139481 810141300 1819 False 2394 2394 90.380 826 2660 1 chr3B.!!$F3 1834
4 TraesCS2B01G374200 chr4B 621966700 621968447 1747 False 2351 2351 90.940 908 2660 1 chr4B.!!$F1 1752
5 TraesCS2B01G374200 chr1A 341018991 341020819 1828 False 1670 1670 83.216 827 2660 1 chr1A.!!$F1 1833
6 TraesCS2B01G374200 chr2D 71255063 71256096 1033 True 1024 1024 84.586 827 1861 1 chr2D.!!$R2 1034
7 TraesCS2B01G374200 chr2D 71245164 71245946 782 True 623 623 81.141 1857 2660 1 chr2D.!!$R1 803
8 TraesCS2B01G374200 chr3A 63453529 63454287 758 False 632 632 81.783 1889 2660 1 chr3A.!!$F1 771
9 TraesCS2B01G374200 chr2A 595991676 595992256 580 False 490 490 82.393 4 571 1 chr2A.!!$F2 567

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
503 506 0.027455 TGTCTGTTTTGACGCAAGCG 59.973 50.0 13.5 13.5 46.03 4.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1812 1822 0.390472 CTTCACCGTCTCTTCCAGCC 60.39 60.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 82 1.496060 ATCCATGGTACCTTGCGAGA 58.504 50.000 19.92 13.21 0.00 4.04
91 94 2.096713 CCTTGCGAGAAAAGTGTCGAAG 60.097 50.000 1.22 0.00 42.94 3.79
98 101 4.433544 CGAGAAAAGTGTCGAAGATCTTGC 60.434 45.833 14.00 3.86 42.94 4.01
99 102 3.430218 AGAAAAGTGTCGAAGATCTTGCG 59.570 43.478 14.00 15.53 40.67 4.85
100 103 2.724977 AAGTGTCGAAGATCTTGCGA 57.275 45.000 14.00 17.48 40.67 5.10
102 105 2.803451 AGTGTCGAAGATCTTGCGATC 58.197 47.619 23.37 19.75 45.18 3.69
117 120 1.517257 GATCGTGGTGGAGACGCAG 60.517 63.158 0.00 0.00 44.70 5.18
120 123 4.314440 GTGGTGGAGACGCAGCCA 62.314 66.667 0.00 0.00 44.70 4.75
130 133 2.357881 CGCAGCCAGTGAAGAGCA 60.358 61.111 0.00 0.00 0.00 4.26
142 145 1.359474 TGAAGAGCACCTCTACCTCCT 59.641 52.381 0.00 0.00 40.28 3.69
156 159 3.889134 CTCCTCGCACAGGCAGCAA 62.889 63.158 0.00 0.00 43.08 3.91
173 176 0.669318 CAAGCCCGTAGAAGCGTTGA 60.669 55.000 0.00 0.00 0.00 3.18
201 204 2.928396 AGGGAGGACGGTGTTGGG 60.928 66.667 0.00 0.00 0.00 4.12
243 246 0.389426 CGTGGTTTCTCTGGTACCGG 60.389 60.000 15.21 15.21 34.62 5.28
258 261 3.350612 CGGAGGCGGCGACAAAAA 61.351 61.111 18.30 0.00 0.00 1.94
259 262 2.254350 GGAGGCGGCGACAAAAAC 59.746 61.111 18.30 0.00 0.00 2.43
260 263 2.254350 GAGGCGGCGACAAAAACC 59.746 61.111 18.30 1.63 0.00 3.27
261 264 3.263503 GAGGCGGCGACAAAAACCC 62.264 63.158 18.30 0.73 0.00 4.11
262 265 3.597728 GGCGGCGACAAAAACCCA 61.598 61.111 12.98 0.00 0.00 4.51
263 266 2.354188 GCGGCGACAAAAACCCAC 60.354 61.111 12.98 0.00 0.00 4.61
264 267 3.111939 CGGCGACAAAAACCCACA 58.888 55.556 0.00 0.00 0.00 4.17
265 268 1.433879 CGGCGACAAAAACCCACAA 59.566 52.632 0.00 0.00 0.00 3.33
266 269 0.179134 CGGCGACAAAAACCCACAAA 60.179 50.000 0.00 0.00 0.00 2.83
267 270 1.282817 GGCGACAAAAACCCACAAAC 58.717 50.000 0.00 0.00 0.00 2.93
268 271 0.917939 GCGACAAAAACCCACAAACG 59.082 50.000 0.00 0.00 0.00 3.60
269 272 0.917939 CGACAAAAACCCACAAACGC 59.082 50.000 0.00 0.00 0.00 4.84
270 273 1.282817 GACAAAAACCCACAAACGCC 58.717 50.000 0.00 0.00 0.00 5.68
271 274 0.458716 ACAAAAACCCACAAACGCCG 60.459 50.000 0.00 0.00 0.00 6.46
272 275 1.142097 AAAAACCCACAAACGCCGG 59.858 52.632 0.00 0.00 0.00 6.13
273 276 2.909614 AAAAACCCACAAACGCCGGC 62.910 55.000 19.07 19.07 0.00 6.13
276 279 4.341502 CCCACAAACGCCGGCAAG 62.342 66.667 28.98 14.14 0.00 4.01
277 280 3.283684 CCACAAACGCCGGCAAGA 61.284 61.111 28.98 0.00 0.00 3.02
278 281 2.718731 CACAAACGCCGGCAAGAA 59.281 55.556 28.98 0.00 0.00 2.52
279 282 1.657181 CACAAACGCCGGCAAGAAC 60.657 57.895 28.98 0.00 0.00 3.01
280 283 1.822186 ACAAACGCCGGCAAGAACT 60.822 52.632 28.98 0.00 0.00 3.01
281 284 1.082104 CAAACGCCGGCAAGAACTC 60.082 57.895 28.98 0.00 0.00 3.01
282 285 2.258726 AAACGCCGGCAAGAACTCC 61.259 57.895 28.98 0.00 0.00 3.85
283 286 2.676163 AAACGCCGGCAAGAACTCCT 62.676 55.000 28.98 0.00 0.00 3.69
284 287 3.121030 CGCCGGCAAGAACTCCTG 61.121 66.667 28.98 0.98 0.00 3.86
285 288 3.435186 GCCGGCAAGAACTCCTGC 61.435 66.667 24.80 0.00 0.00 4.85
286 289 2.032528 CCGGCAAGAACTCCTGCA 59.967 61.111 2.90 0.00 0.00 4.41
287 290 1.600636 CCGGCAAGAACTCCTGCAA 60.601 57.895 2.90 0.00 0.00 4.08
288 291 1.172180 CCGGCAAGAACTCCTGCAAA 61.172 55.000 2.90 0.00 0.00 3.68
289 292 0.667993 CGGCAAGAACTCCTGCAAAA 59.332 50.000 2.90 0.00 0.00 2.44
290 293 1.066908 CGGCAAGAACTCCTGCAAAAA 59.933 47.619 2.90 0.00 0.00 1.94
291 294 2.288395 CGGCAAGAACTCCTGCAAAAAT 60.288 45.455 2.90 0.00 0.00 1.82
292 295 3.062042 GGCAAGAACTCCTGCAAAAATG 58.938 45.455 2.90 0.00 0.00 2.32
293 296 3.062042 GCAAGAACTCCTGCAAAAATGG 58.938 45.455 0.00 0.00 0.00 3.16
294 297 3.243839 GCAAGAACTCCTGCAAAAATGGA 60.244 43.478 0.00 0.00 0.00 3.41
295 298 4.740334 GCAAGAACTCCTGCAAAAATGGAA 60.740 41.667 0.00 0.00 0.00 3.53
296 299 4.861102 AGAACTCCTGCAAAAATGGAAG 57.139 40.909 0.00 0.00 0.00 3.46
297 300 3.575687 AGAACTCCTGCAAAAATGGAAGG 59.424 43.478 0.00 0.00 0.00 3.46
298 301 2.250924 ACTCCTGCAAAAATGGAAGGG 58.749 47.619 0.00 0.00 0.00 3.95
299 302 1.551883 CTCCTGCAAAAATGGAAGGGG 59.448 52.381 0.00 0.00 0.00 4.79
300 303 0.036105 CCTGCAAAAATGGAAGGGGC 60.036 55.000 0.00 0.00 0.00 5.80
301 304 0.686224 CTGCAAAAATGGAAGGGGCA 59.314 50.000 0.00 0.00 0.00 5.36
302 305 0.686224 TGCAAAAATGGAAGGGGCAG 59.314 50.000 0.00 0.00 0.00 4.85
303 306 0.686789 GCAAAAATGGAAGGGGCAGT 59.313 50.000 0.00 0.00 0.00 4.40
304 307 1.608801 GCAAAAATGGAAGGGGCAGTG 60.609 52.381 0.00 0.00 0.00 3.66
305 308 1.002315 CAAAAATGGAAGGGGCAGTGG 59.998 52.381 0.00 0.00 0.00 4.00
306 309 0.545071 AAAATGGAAGGGGCAGTGGG 60.545 55.000 0.00 0.00 0.00 4.61
307 310 1.442886 AAATGGAAGGGGCAGTGGGA 61.443 55.000 0.00 0.00 0.00 4.37
308 311 1.224003 AATGGAAGGGGCAGTGGGAT 61.224 55.000 0.00 0.00 0.00 3.85
309 312 1.224003 ATGGAAGGGGCAGTGGGATT 61.224 55.000 0.00 0.00 0.00 3.01
310 313 1.380380 GGAAGGGGCAGTGGGATTG 60.380 63.158 0.00 0.00 0.00 2.67
311 314 1.384191 GAAGGGGCAGTGGGATTGT 59.616 57.895 0.00 0.00 0.00 2.71
312 315 0.967380 GAAGGGGCAGTGGGATTGTG 60.967 60.000 0.00 0.00 0.00 3.33
313 316 1.729267 AAGGGGCAGTGGGATTGTGT 61.729 55.000 0.00 0.00 0.00 3.72
314 317 1.978617 GGGGCAGTGGGATTGTGTG 60.979 63.158 0.00 0.00 0.00 3.82
315 318 2.639327 GGGCAGTGGGATTGTGTGC 61.639 63.158 0.00 0.00 0.00 4.57
316 319 1.902918 GGCAGTGGGATTGTGTGCA 60.903 57.895 0.00 0.00 35.78 4.57
317 320 1.252904 GGCAGTGGGATTGTGTGCAT 61.253 55.000 0.00 0.00 35.78 3.96
318 321 0.108992 GCAGTGGGATTGTGTGCATG 60.109 55.000 0.00 0.00 34.18 4.06
319 322 0.108992 CAGTGGGATTGTGTGCATGC 60.109 55.000 11.82 11.82 0.00 4.06
320 323 1.153978 GTGGGATTGTGTGCATGCG 60.154 57.895 14.09 0.00 0.00 4.73
321 324 1.603171 TGGGATTGTGTGCATGCGT 60.603 52.632 14.09 0.00 0.00 5.24
322 325 1.177895 TGGGATTGTGTGCATGCGTT 61.178 50.000 14.09 0.00 0.00 4.84
323 326 0.733566 GGGATTGTGTGCATGCGTTG 60.734 55.000 14.09 0.00 0.00 4.10
324 327 0.733566 GGATTGTGTGCATGCGTTGG 60.734 55.000 14.09 0.00 0.00 3.77
325 328 0.733566 GATTGTGTGCATGCGTTGGG 60.734 55.000 14.09 0.00 0.00 4.12
326 329 2.157305 ATTGTGTGCATGCGTTGGGG 62.157 55.000 14.09 0.00 0.00 4.96
327 330 4.722855 GTGTGCATGCGTTGGGGC 62.723 66.667 14.09 0.00 0.00 5.80
328 331 4.972733 TGTGCATGCGTTGGGGCT 62.973 61.111 14.09 0.00 0.00 5.19
329 332 3.683937 GTGCATGCGTTGGGGCTT 61.684 61.111 14.09 0.00 0.00 4.35
330 333 3.682885 TGCATGCGTTGGGGCTTG 61.683 61.111 14.09 0.00 40.08 4.01
331 334 4.440127 GCATGCGTTGGGGCTTGG 62.440 66.667 0.00 0.00 38.22 3.61
332 335 3.762247 CATGCGTTGGGGCTTGGG 61.762 66.667 0.00 0.00 35.21 4.12
352 355 3.799755 GCCGGCATGGACAACGAC 61.800 66.667 24.80 0.00 42.00 4.34
353 356 2.358125 CCGGCATGGACAACGACA 60.358 61.111 0.00 0.00 42.00 4.35
354 357 2.390599 CCGGCATGGACAACGACAG 61.391 63.158 0.00 0.00 42.00 3.51
355 358 1.374125 CGGCATGGACAACGACAGA 60.374 57.895 0.00 0.00 0.00 3.41
356 359 1.354337 CGGCATGGACAACGACAGAG 61.354 60.000 0.00 0.00 0.00 3.35
357 360 0.320771 GGCATGGACAACGACAGAGT 60.321 55.000 0.00 0.00 0.00 3.24
358 361 0.792640 GCATGGACAACGACAGAGTG 59.207 55.000 0.00 0.00 0.00 3.51
359 362 1.432514 CATGGACAACGACAGAGTGG 58.567 55.000 0.00 0.00 0.00 4.00
360 363 0.320771 ATGGACAACGACAGAGTGGC 60.321 55.000 0.00 0.00 0.00 5.01
361 364 1.668151 GGACAACGACAGAGTGGCC 60.668 63.158 0.00 0.00 0.00 5.36
362 365 1.069090 GACAACGACAGAGTGGCCA 59.931 57.895 0.00 0.00 0.00 5.36
363 366 0.946221 GACAACGACAGAGTGGCCAG 60.946 60.000 5.11 0.00 0.00 4.85
364 367 1.367471 CAACGACAGAGTGGCCAGA 59.633 57.895 5.11 0.00 0.00 3.86
365 368 0.249868 CAACGACAGAGTGGCCAGAA 60.250 55.000 5.11 0.00 0.00 3.02
366 369 0.468226 AACGACAGAGTGGCCAGAAA 59.532 50.000 5.11 0.00 0.00 2.52
367 370 0.468226 ACGACAGAGTGGCCAGAAAA 59.532 50.000 5.11 0.00 0.00 2.29
368 371 1.072331 ACGACAGAGTGGCCAGAAAAT 59.928 47.619 5.11 0.00 0.00 1.82
369 372 1.466167 CGACAGAGTGGCCAGAAAATG 59.534 52.381 5.11 3.49 0.00 2.32
377 380 4.413928 CCAGAAAATGGGCGGTGA 57.586 55.556 0.00 0.00 46.36 4.02
378 381 2.886382 CCAGAAAATGGGCGGTGAT 58.114 52.632 0.00 0.00 46.36 3.06
379 382 0.457035 CCAGAAAATGGGCGGTGATG 59.543 55.000 0.00 0.00 46.36 3.07
380 383 0.457035 CAGAAAATGGGCGGTGATGG 59.543 55.000 0.00 0.00 0.00 3.51
381 384 1.141665 GAAAATGGGCGGTGATGGC 59.858 57.895 0.00 0.00 0.00 4.40
382 385 1.305213 AAAATGGGCGGTGATGGCT 60.305 52.632 0.00 0.00 34.31 4.75
383 386 0.033601 AAAATGGGCGGTGATGGCTA 60.034 50.000 0.00 0.00 34.31 3.93
384 387 0.185901 AAATGGGCGGTGATGGCTAT 59.814 50.000 0.00 0.00 37.20 2.97
385 388 0.538057 AATGGGCGGTGATGGCTATG 60.538 55.000 0.00 0.00 35.77 2.23
386 389 1.418097 ATGGGCGGTGATGGCTATGA 61.418 55.000 0.00 0.00 34.31 2.15
387 390 1.598130 GGGCGGTGATGGCTATGAC 60.598 63.158 0.00 0.00 34.31 3.06
388 391 1.598130 GGCGGTGATGGCTATGACC 60.598 63.158 8.70 8.70 37.24 4.02
390 393 4.779475 GGTGATGGCTATGACCGG 57.221 61.111 2.36 0.00 30.82 5.28
391 394 1.071471 GGTGATGGCTATGACCGGG 59.929 63.158 6.32 0.00 30.82 5.73
392 395 1.071471 GTGATGGCTATGACCGGGG 59.929 63.158 6.32 0.00 0.00 5.73
393 396 2.146724 TGATGGCTATGACCGGGGG 61.147 63.158 6.32 0.00 0.00 5.40
408 411 2.621115 GGGGGAGCCTCATAGGGA 59.379 66.667 0.00 0.00 35.37 4.20
409 412 1.073706 GGGGGAGCCTCATAGGGAA 60.074 63.158 0.00 0.00 35.37 3.97
410 413 0.697854 GGGGGAGCCTCATAGGGAAA 60.698 60.000 0.00 0.00 35.37 3.13
411 414 0.767998 GGGGAGCCTCATAGGGAAAG 59.232 60.000 0.00 0.00 35.37 2.62
412 415 0.767998 GGGAGCCTCATAGGGAAAGG 59.232 60.000 0.00 0.00 35.37 3.11
413 416 1.695989 GGGAGCCTCATAGGGAAAGGA 60.696 57.143 0.00 0.00 35.37 3.36
414 417 2.127708 GGAGCCTCATAGGGAAAGGAA 58.872 52.381 0.00 0.00 35.37 3.36
415 418 2.509964 GGAGCCTCATAGGGAAAGGAAA 59.490 50.000 0.00 0.00 35.37 3.13
416 419 3.053619 GGAGCCTCATAGGGAAAGGAAAA 60.054 47.826 0.00 0.00 35.37 2.29
417 420 4.569865 GGAGCCTCATAGGGAAAGGAAAAA 60.570 45.833 0.00 0.00 35.37 1.94
418 421 5.204292 GAGCCTCATAGGGAAAGGAAAAAT 58.796 41.667 0.00 0.00 35.37 1.82
419 422 4.958581 AGCCTCATAGGGAAAGGAAAAATG 59.041 41.667 0.00 0.00 35.37 2.32
420 423 4.442052 GCCTCATAGGGAAAGGAAAAATGC 60.442 45.833 0.00 0.00 35.37 3.56
421 424 4.202050 CCTCATAGGGAAAGGAAAAATGCG 60.202 45.833 0.00 0.00 31.44 4.73
422 425 3.699038 TCATAGGGAAAGGAAAAATGCGG 59.301 43.478 0.00 0.00 0.00 5.69
423 426 2.302587 AGGGAAAGGAAAAATGCGGA 57.697 45.000 0.00 0.00 0.00 5.54
424 427 1.893137 AGGGAAAGGAAAAATGCGGAC 59.107 47.619 0.00 0.00 0.00 4.79
425 428 1.893137 GGGAAAGGAAAAATGCGGACT 59.107 47.619 0.00 0.00 0.00 3.85
426 429 2.352715 GGGAAAGGAAAAATGCGGACTG 60.353 50.000 0.00 0.00 0.00 3.51
427 430 2.296190 GGAAAGGAAAAATGCGGACTGT 59.704 45.455 0.00 0.00 0.00 3.55
428 431 3.243737 GGAAAGGAAAAATGCGGACTGTT 60.244 43.478 0.00 0.00 0.00 3.16
429 432 4.368315 GAAAGGAAAAATGCGGACTGTTT 58.632 39.130 0.00 0.00 0.00 2.83
430 433 4.400529 AAGGAAAAATGCGGACTGTTTT 57.599 36.364 0.00 0.00 0.00 2.43
431 434 5.523438 AAGGAAAAATGCGGACTGTTTTA 57.477 34.783 0.00 0.00 0.00 1.52
432 435 4.866921 AGGAAAAATGCGGACTGTTTTAC 58.133 39.130 0.00 0.00 0.00 2.01
433 436 3.985279 GGAAAAATGCGGACTGTTTTACC 59.015 43.478 0.00 0.00 0.00 2.85
434 437 4.500035 GGAAAAATGCGGACTGTTTTACCA 60.500 41.667 0.00 0.00 0.00 3.25
435 438 4.657436 AAAATGCGGACTGTTTTACCAA 57.343 36.364 0.00 0.00 0.00 3.67
436 439 3.636282 AATGCGGACTGTTTTACCAAC 57.364 42.857 0.00 0.00 0.00 3.77
437 440 2.039818 TGCGGACTGTTTTACCAACA 57.960 45.000 0.00 0.00 0.00 3.33
438 441 2.366533 TGCGGACTGTTTTACCAACAA 58.633 42.857 0.00 0.00 0.00 2.83
439 442 2.356382 TGCGGACTGTTTTACCAACAAG 59.644 45.455 0.00 0.00 0.00 3.16
440 443 2.287368 GCGGACTGTTTTACCAACAAGG 60.287 50.000 0.00 0.00 45.67 3.61
441 444 2.292292 CGGACTGTTTTACCAACAAGGG 59.708 50.000 0.00 0.00 43.89 3.95
442 445 3.558033 GGACTGTTTTACCAACAAGGGA 58.442 45.455 0.00 0.00 43.89 4.20
443 446 3.568430 GGACTGTTTTACCAACAAGGGAG 59.432 47.826 0.00 0.00 43.89 4.30
444 447 2.956333 ACTGTTTTACCAACAAGGGAGC 59.044 45.455 0.00 0.00 43.89 4.70
445 448 2.296190 CTGTTTTACCAACAAGGGAGCC 59.704 50.000 0.00 0.00 43.89 4.70
446 449 2.312390 GTTTTACCAACAAGGGAGCCA 58.688 47.619 0.00 0.00 43.89 4.75
447 450 2.286365 TTTACCAACAAGGGAGCCAG 57.714 50.000 0.00 0.00 43.89 4.85
448 451 1.440618 TTACCAACAAGGGAGCCAGA 58.559 50.000 0.00 0.00 43.89 3.86
449 452 0.984230 TACCAACAAGGGAGCCAGAG 59.016 55.000 0.00 0.00 43.89 3.35
450 453 1.001641 CCAACAAGGGAGCCAGAGG 60.002 63.158 0.00 0.00 0.00 3.69
451 454 1.492133 CCAACAAGGGAGCCAGAGGA 61.492 60.000 0.00 0.00 0.00 3.71
452 455 0.035630 CAACAAGGGAGCCAGAGGAG 60.036 60.000 0.00 0.00 0.00 3.69
453 456 1.204113 AACAAGGGAGCCAGAGGAGG 61.204 60.000 0.00 0.00 0.00 4.30
454 457 1.306482 CAAGGGAGCCAGAGGAGGA 60.306 63.158 0.00 0.00 0.00 3.71
455 458 1.306568 AAGGGAGCCAGAGGAGGAC 60.307 63.158 0.00 0.00 0.00 3.85
456 459 2.039624 GGGAGCCAGAGGAGGACA 59.960 66.667 0.00 0.00 0.00 4.02
457 460 1.613630 GGGAGCCAGAGGAGGACAA 60.614 63.158 0.00 0.00 0.00 3.18
458 461 1.201429 GGGAGCCAGAGGAGGACAAA 61.201 60.000 0.00 0.00 0.00 2.83
459 462 0.693049 GGAGCCAGAGGAGGACAAAA 59.307 55.000 0.00 0.00 0.00 2.44
460 463 1.339535 GGAGCCAGAGGAGGACAAAAG 60.340 57.143 0.00 0.00 0.00 2.27
461 464 1.625818 GAGCCAGAGGAGGACAAAAGA 59.374 52.381 0.00 0.00 0.00 2.52
462 465 1.627834 AGCCAGAGGAGGACAAAAGAG 59.372 52.381 0.00 0.00 0.00 2.85
463 466 1.339535 GCCAGAGGAGGACAAAAGAGG 60.340 57.143 0.00 0.00 0.00 3.69
464 467 1.280421 CCAGAGGAGGACAAAAGAGGG 59.720 57.143 0.00 0.00 0.00 4.30
465 468 1.981495 CAGAGGAGGACAAAAGAGGGT 59.019 52.381 0.00 0.00 0.00 4.34
466 469 2.027653 CAGAGGAGGACAAAAGAGGGTC 60.028 54.545 0.00 0.00 0.00 4.46
472 475 3.345508 GGACAAAAGAGGGTCCGTATT 57.654 47.619 0.00 0.00 43.67 1.89
473 476 3.268330 GGACAAAAGAGGGTCCGTATTC 58.732 50.000 0.00 0.00 43.67 1.75
474 477 2.928116 GACAAAAGAGGGTCCGTATTCG 59.072 50.000 0.00 0.00 0.00 3.34
475 478 2.301009 ACAAAAGAGGGTCCGTATTCGT 59.699 45.455 0.00 0.00 35.01 3.85
476 479 2.928116 CAAAAGAGGGTCCGTATTCGTC 59.072 50.000 0.00 0.00 35.01 4.20
477 480 2.140839 AAGAGGGTCCGTATTCGTCT 57.859 50.000 0.00 0.00 35.01 4.18
478 481 1.390565 AGAGGGTCCGTATTCGTCTG 58.609 55.000 0.00 0.00 35.01 3.51
479 482 0.248949 GAGGGTCCGTATTCGTCTGC 60.249 60.000 0.00 0.00 35.01 4.26
480 483 1.588139 GGGTCCGTATTCGTCTGCG 60.588 63.158 0.00 0.00 39.92 5.18
481 484 2.228914 GGTCCGTATTCGTCTGCGC 61.229 63.158 0.00 0.00 38.14 6.09
482 485 2.103538 TCCGTATTCGTCTGCGCC 59.896 61.111 4.18 0.00 38.14 6.53
483 486 2.960129 CCGTATTCGTCTGCGCCC 60.960 66.667 4.18 0.00 38.14 6.13
484 487 2.104331 CGTATTCGTCTGCGCCCT 59.896 61.111 4.18 0.00 38.14 5.19
485 488 2.230940 CGTATTCGTCTGCGCCCTG 61.231 63.158 4.18 0.00 38.14 4.45
486 489 1.153628 GTATTCGTCTGCGCCCTGT 60.154 57.895 4.18 0.00 38.14 4.00
487 490 1.141019 TATTCGTCTGCGCCCTGTC 59.859 57.895 4.18 0.00 38.14 3.51
488 491 1.320344 TATTCGTCTGCGCCCTGTCT 61.320 55.000 4.18 0.00 38.14 3.41
489 492 2.842394 ATTCGTCTGCGCCCTGTCTG 62.842 60.000 4.18 0.00 38.14 3.51
490 493 4.363990 CGTCTGCGCCCTGTCTGT 62.364 66.667 4.18 0.00 0.00 3.41
491 494 2.031163 GTCTGCGCCCTGTCTGTT 59.969 61.111 4.18 0.00 0.00 3.16
492 495 1.598130 GTCTGCGCCCTGTCTGTTT 60.598 57.895 4.18 0.00 0.00 2.83
493 496 1.148273 TCTGCGCCCTGTCTGTTTT 59.852 52.632 4.18 0.00 0.00 2.43
494 497 1.165907 TCTGCGCCCTGTCTGTTTTG 61.166 55.000 4.18 0.00 0.00 2.44
495 498 1.153066 TGCGCCCTGTCTGTTTTGA 60.153 52.632 4.18 0.00 0.00 2.69
496 499 1.282875 GCGCCCTGTCTGTTTTGAC 59.717 57.895 0.00 0.00 37.47 3.18
497 500 1.569493 CGCCCTGTCTGTTTTGACG 59.431 57.895 0.00 0.00 39.64 4.35
498 501 1.282875 GCCCTGTCTGTTTTGACGC 59.717 57.895 0.00 0.00 39.64 5.19
499 502 1.444119 GCCCTGTCTGTTTTGACGCA 61.444 55.000 0.00 0.00 39.64 5.24
500 503 1.021202 CCCTGTCTGTTTTGACGCAA 58.979 50.000 0.00 0.00 39.64 4.85
501 504 1.002468 CCCTGTCTGTTTTGACGCAAG 60.002 52.381 0.00 0.00 39.64 4.01
502 505 1.597937 CCTGTCTGTTTTGACGCAAGC 60.598 52.381 0.00 0.00 45.62 4.01
503 506 0.027455 TGTCTGTTTTGACGCAAGCG 59.973 50.000 13.50 13.50 46.03 4.68
504 507 1.010125 TCTGTTTTGACGCAAGCGC 60.010 52.632 15.09 0.00 44.19 5.92
514 517 4.792106 GCAAGCGCGATCCAAATT 57.208 50.000 12.10 0.00 0.00 1.82
515 518 3.034569 GCAAGCGCGATCCAAATTT 57.965 47.368 12.10 0.00 0.00 1.82
516 519 0.641783 GCAAGCGCGATCCAAATTTG 59.358 50.000 12.10 11.40 0.00 2.32
517 520 1.732077 GCAAGCGCGATCCAAATTTGA 60.732 47.619 19.86 6.29 0.00 2.69
518 521 2.594321 CAAGCGCGATCCAAATTTGAA 58.406 42.857 19.86 0.00 0.00 2.69
519 522 2.262572 AGCGCGATCCAAATTTGAAC 57.737 45.000 19.86 9.00 0.00 3.18
520 523 1.135402 AGCGCGATCCAAATTTGAACC 60.135 47.619 19.86 6.66 0.00 3.62
521 524 1.534028 CGCGATCCAAATTTGAACCG 58.466 50.000 19.86 17.64 0.00 4.44
522 525 1.129624 CGCGATCCAAATTTGAACCGA 59.870 47.619 19.86 8.41 0.00 4.69
523 526 2.413502 CGCGATCCAAATTTGAACCGAA 60.414 45.455 19.86 0.00 0.00 4.30
524 527 3.570559 GCGATCCAAATTTGAACCGAAA 58.429 40.909 19.86 0.00 0.00 3.46
525 528 3.984633 GCGATCCAAATTTGAACCGAAAA 59.015 39.130 19.86 0.00 0.00 2.29
526 529 4.625311 GCGATCCAAATTTGAACCGAAAAT 59.375 37.500 19.86 0.45 0.00 1.82
527 530 5.802956 GCGATCCAAATTTGAACCGAAAATA 59.197 36.000 19.86 0.00 0.00 1.40
528 531 6.309251 GCGATCCAAATTTGAACCGAAAATAA 59.691 34.615 19.86 0.00 0.00 1.40
529 532 7.148722 GCGATCCAAATTTGAACCGAAAATAAA 60.149 33.333 19.86 0.00 0.00 1.40
530 533 8.868916 CGATCCAAATTTGAACCGAAAATAAAT 58.131 29.630 19.86 0.00 0.00 1.40
532 535 8.233692 TCCAAATTTGAACCGAAAATAAATCG 57.766 30.769 19.86 0.00 39.92 3.34
533 536 8.082852 TCCAAATTTGAACCGAAAATAAATCGA 58.917 29.630 19.86 0.00 42.76 3.59
534 537 8.372521 CCAAATTTGAACCGAAAATAAATCGAG 58.627 33.333 19.86 0.00 42.76 4.04
535 538 8.372521 CAAATTTGAACCGAAAATAAATCGAGG 58.627 33.333 13.08 0.00 42.76 4.63
536 539 6.804770 TTTGAACCGAAAATAAATCGAGGA 57.195 33.333 0.00 0.00 42.76 3.71
537 540 5.789710 TGAACCGAAAATAAATCGAGGAC 57.210 39.130 0.00 0.00 42.76 3.85
538 541 4.327898 TGAACCGAAAATAAATCGAGGACG 59.672 41.667 0.00 0.00 42.76 4.79
539 542 3.192466 ACCGAAAATAAATCGAGGACGG 58.808 45.455 0.00 0.00 42.76 4.79
540 543 3.119029 ACCGAAAATAAATCGAGGACGGA 60.119 43.478 0.00 0.00 42.76 4.69
541 544 3.244579 CCGAAAATAAATCGAGGACGGAC 59.755 47.826 0.00 0.00 42.76 4.79
542 545 3.861113 CGAAAATAAATCGAGGACGGACA 59.139 43.478 0.00 0.00 42.76 4.02
543 546 4.327898 CGAAAATAAATCGAGGACGGACAA 59.672 41.667 0.00 0.00 42.76 3.18
544 547 5.163933 CGAAAATAAATCGAGGACGGACAAA 60.164 40.000 0.00 0.00 42.76 2.83
545 548 6.563222 AAAATAAATCGAGGACGGACAAAA 57.437 33.333 0.00 0.00 40.21 2.44
546 549 6.563222 AAATAAATCGAGGACGGACAAAAA 57.437 33.333 0.00 0.00 40.21 1.94
565 568 5.576447 AAAAACGAACTGGTGATCTGTTT 57.424 34.783 0.00 0.00 37.60 2.83
566 569 4.552166 AAACGAACTGGTGATCTGTTTG 57.448 40.909 1.63 1.63 41.61 2.93
567 570 1.873591 ACGAACTGGTGATCTGTTTGC 59.126 47.619 2.97 0.00 40.36 3.68
568 571 2.146342 CGAACTGGTGATCTGTTTGCT 58.854 47.619 0.00 0.00 37.60 3.91
569 572 2.549754 CGAACTGGTGATCTGTTTGCTT 59.450 45.455 0.00 0.00 37.60 3.91
570 573 3.003689 CGAACTGGTGATCTGTTTGCTTT 59.996 43.478 0.00 0.00 37.60 3.51
571 574 4.498009 CGAACTGGTGATCTGTTTGCTTTT 60.498 41.667 0.00 0.00 37.60 2.27
572 575 5.277779 CGAACTGGTGATCTGTTTGCTTTTA 60.278 40.000 0.00 0.00 37.60 1.52
573 576 6.568462 CGAACTGGTGATCTGTTTGCTTTTAT 60.568 38.462 0.00 0.00 37.60 1.40
574 577 6.655078 ACTGGTGATCTGTTTGCTTTTATT 57.345 33.333 0.00 0.00 0.00 1.40
575 578 6.449698 ACTGGTGATCTGTTTGCTTTTATTG 58.550 36.000 0.00 0.00 0.00 1.90
576 579 5.782047 TGGTGATCTGTTTGCTTTTATTGG 58.218 37.500 0.00 0.00 0.00 3.16
577 580 5.538053 TGGTGATCTGTTTGCTTTTATTGGA 59.462 36.000 0.00 0.00 0.00 3.53
578 581 5.863935 GGTGATCTGTTTGCTTTTATTGGAC 59.136 40.000 0.00 0.00 0.00 4.02
579 582 5.863935 GTGATCTGTTTGCTTTTATTGGACC 59.136 40.000 0.00 0.00 0.00 4.46
580 583 4.497473 TCTGTTTGCTTTTATTGGACCG 57.503 40.909 0.00 0.00 0.00 4.79
581 584 3.886505 TCTGTTTGCTTTTATTGGACCGT 59.113 39.130 0.00 0.00 0.00 4.83
582 585 3.971150 TGTTTGCTTTTATTGGACCGTG 58.029 40.909 0.00 0.00 0.00 4.94
583 586 3.632604 TGTTTGCTTTTATTGGACCGTGA 59.367 39.130 0.00 0.00 0.00 4.35
584 587 4.279671 TGTTTGCTTTTATTGGACCGTGAT 59.720 37.500 0.00 0.00 0.00 3.06
585 588 5.221342 TGTTTGCTTTTATTGGACCGTGATT 60.221 36.000 0.00 0.00 0.00 2.57
586 589 5.461032 TTGCTTTTATTGGACCGTGATTT 57.539 34.783 0.00 0.00 0.00 2.17
587 590 4.804108 TGCTTTTATTGGACCGTGATTTG 58.196 39.130 0.00 0.00 0.00 2.32
588 591 4.279671 TGCTTTTATTGGACCGTGATTTGT 59.720 37.500 0.00 0.00 0.00 2.83
589 592 4.621034 GCTTTTATTGGACCGTGATTTGTG 59.379 41.667 0.00 0.00 0.00 3.33
590 593 5.768317 CTTTTATTGGACCGTGATTTGTGT 58.232 37.500 0.00 0.00 0.00 3.72
591 594 5.776173 TTTATTGGACCGTGATTTGTGTT 57.224 34.783 0.00 0.00 0.00 3.32
592 595 5.776173 TTATTGGACCGTGATTTGTGTTT 57.224 34.783 0.00 0.00 0.00 2.83
593 596 3.428746 TTGGACCGTGATTTGTGTTTG 57.571 42.857 0.00 0.00 0.00 2.93
594 597 2.370349 TGGACCGTGATTTGTGTTTGT 58.630 42.857 0.00 0.00 0.00 2.83
595 598 2.755655 TGGACCGTGATTTGTGTTTGTT 59.244 40.909 0.00 0.00 0.00 2.83
596 599 3.193691 TGGACCGTGATTTGTGTTTGTTT 59.806 39.130 0.00 0.00 0.00 2.83
597 600 3.549873 GGACCGTGATTTGTGTTTGTTTG 59.450 43.478 0.00 0.00 0.00 2.93
598 601 3.516615 ACCGTGATTTGTGTTTGTTTGG 58.483 40.909 0.00 0.00 0.00 3.28
599 602 2.283884 CCGTGATTTGTGTTTGTTTGGC 59.716 45.455 0.00 0.00 0.00 4.52
600 603 2.283884 CGTGATTTGTGTTTGTTTGGCC 59.716 45.455 0.00 0.00 0.00 5.36
601 604 3.530535 GTGATTTGTGTTTGTTTGGCCT 58.469 40.909 3.32 0.00 0.00 5.19
602 605 3.555547 GTGATTTGTGTTTGTTTGGCCTC 59.444 43.478 3.32 0.00 0.00 4.70
603 606 3.196469 TGATTTGTGTTTGTTTGGCCTCA 59.804 39.130 3.32 0.00 0.00 3.86
604 607 3.685139 TTTGTGTTTGTTTGGCCTCAA 57.315 38.095 3.32 4.32 0.00 3.02
605 608 3.685139 TTGTGTTTGTTTGGCCTCAAA 57.315 38.095 3.32 10.51 40.23 2.69
613 616 0.179097 TTTGGCCTCAAACAAACGGC 60.179 50.000 3.32 0.00 37.89 5.68
615 618 2.338620 GCCTCAAACAAACGGCCC 59.661 61.111 0.00 0.00 36.56 5.80
616 619 2.642700 CCTCAAACAAACGGCCCG 59.357 61.111 0.00 0.00 0.00 6.13
617 620 1.894756 CCTCAAACAAACGGCCCGA 60.895 57.895 11.71 0.00 0.00 5.14
618 621 1.281656 CTCAAACAAACGGCCCGAC 59.718 57.895 11.71 0.00 0.00 4.79
619 622 1.440938 CTCAAACAAACGGCCCGACA 61.441 55.000 11.71 0.00 0.00 4.35
620 623 1.030488 TCAAACAAACGGCCCGACAA 61.030 50.000 11.71 0.00 0.00 3.18
621 624 0.179134 CAAACAAACGGCCCGACAAA 60.179 50.000 11.71 0.00 0.00 2.83
622 625 0.531200 AAACAAACGGCCCGACAAAA 59.469 45.000 11.71 0.00 0.00 2.44
623 626 0.747852 AACAAACGGCCCGACAAAAT 59.252 45.000 11.71 0.00 0.00 1.82
624 627 0.031449 ACAAACGGCCCGACAAAATG 59.969 50.000 11.71 1.53 0.00 2.32
625 628 0.665972 CAAACGGCCCGACAAAATGG 60.666 55.000 11.71 0.00 0.00 3.16
631 634 2.566824 CCCGACAAAATGGGGTCTG 58.433 57.895 0.00 0.00 41.52 3.51
632 635 0.965363 CCCGACAAAATGGGGTCTGG 60.965 60.000 0.00 0.00 41.52 3.86
633 636 1.595093 CCGACAAAATGGGGTCTGGC 61.595 60.000 0.00 0.00 31.88 4.85
634 637 1.883021 GACAAAATGGGGTCTGGCG 59.117 57.895 0.00 0.00 0.00 5.69
635 638 0.893727 GACAAAATGGGGTCTGGCGT 60.894 55.000 0.00 0.00 0.00 5.68
636 639 1.178534 ACAAAATGGGGTCTGGCGTG 61.179 55.000 0.00 0.00 0.00 5.34
637 640 1.606313 AAAATGGGGTCTGGCGTGG 60.606 57.895 0.00 0.00 0.00 4.94
638 641 2.075355 AAAATGGGGTCTGGCGTGGA 62.075 55.000 0.00 0.00 0.00 4.02
639 642 2.484287 AAATGGGGTCTGGCGTGGAG 62.484 60.000 0.00 0.00 0.00 3.86
640 643 3.924013 ATGGGGTCTGGCGTGGAGA 62.924 63.158 0.00 0.00 0.00 3.71
641 644 3.083997 GGGGTCTGGCGTGGAGAT 61.084 66.667 0.00 0.00 0.00 2.75
642 645 2.187946 GGGTCTGGCGTGGAGATG 59.812 66.667 0.00 0.00 0.00 2.90
643 646 2.187946 GGTCTGGCGTGGAGATGG 59.812 66.667 0.00 0.00 0.00 3.51
644 647 2.512515 GTCTGGCGTGGAGATGGC 60.513 66.667 0.00 0.00 0.00 4.40
648 651 2.828868 GGCGTGGAGATGGCCATA 59.171 61.111 20.84 0.00 46.13 2.74
649 652 1.376466 GGCGTGGAGATGGCCATAT 59.624 57.895 20.84 17.43 46.13 1.78
650 653 0.613260 GGCGTGGAGATGGCCATATA 59.387 55.000 20.84 0.00 46.13 0.86
651 654 1.676014 GGCGTGGAGATGGCCATATAC 60.676 57.143 20.84 18.34 46.13 1.47
652 655 1.001974 GCGTGGAGATGGCCATATACA 59.998 52.381 21.70 21.70 40.68 2.29
653 656 2.549992 GCGTGGAGATGGCCATATACAA 60.550 50.000 26.79 8.65 40.68 2.41
654 657 3.869912 GCGTGGAGATGGCCATATACAAT 60.870 47.826 26.79 0.00 40.68 2.71
655 658 3.686241 CGTGGAGATGGCCATATACAATG 59.314 47.826 26.79 17.90 40.68 2.82
656 659 4.563374 CGTGGAGATGGCCATATACAATGA 60.563 45.833 26.79 1.00 40.68 2.57
657 660 5.503927 GTGGAGATGGCCATATACAATGAT 58.496 41.667 26.79 0.00 40.68 2.45
658 661 5.948162 GTGGAGATGGCCATATACAATGATT 59.052 40.000 26.79 0.00 40.68 2.57
659 662 5.947566 TGGAGATGGCCATATACAATGATTG 59.052 40.000 23.22 3.16 31.66 2.67
660 663 6.182627 GGAGATGGCCATATACAATGATTGA 58.817 40.000 20.84 0.00 0.00 2.57
661 664 6.832384 GGAGATGGCCATATACAATGATTGAT 59.168 38.462 20.84 4.03 0.00 2.57
662 665 7.994911 GGAGATGGCCATATACAATGATTGATA 59.005 37.037 20.84 6.06 0.00 2.15
663 666 9.399797 GAGATGGCCATATACAATGATTGATAA 57.600 33.333 20.84 0.00 0.00 1.75
664 667 9.404848 AGATGGCCATATACAATGATTGATAAG 57.595 33.333 20.84 3.23 0.00 1.73
665 668 9.399797 GATGGCCATATACAATGATTGATAAGA 57.600 33.333 20.84 0.00 0.00 2.10
666 669 9.931698 ATGGCCATATACAATGATTGATAAGAT 57.068 29.630 19.18 0.00 0.00 2.40
699 702 9.757227 ATCTTAAGTCTTGCATGTAATCTAGAC 57.243 33.333 1.63 5.50 33.86 2.59
700 703 8.749354 TCTTAAGTCTTGCATGTAATCTAGACA 58.251 33.333 13.60 0.00 35.61 3.41
701 704 9.539825 CTTAAGTCTTGCATGTAATCTAGACAT 57.460 33.333 13.60 6.32 38.05 3.06
731 734 7.881775 AAAAATAGGTCTACAATGGGTCATC 57.118 36.000 0.00 0.00 0.00 2.92
732 735 6.831664 AAATAGGTCTACAATGGGTCATCT 57.168 37.500 0.00 0.00 0.00 2.90
733 736 6.426646 AATAGGTCTACAATGGGTCATCTC 57.573 41.667 0.00 0.00 0.00 2.75
734 737 4.000928 AGGTCTACAATGGGTCATCTCT 57.999 45.455 0.00 0.00 0.00 3.10
735 738 4.366267 AGGTCTACAATGGGTCATCTCTT 58.634 43.478 0.00 0.00 0.00 2.85
736 739 5.529289 AGGTCTACAATGGGTCATCTCTTA 58.471 41.667 0.00 0.00 0.00 2.10
737 740 5.600484 AGGTCTACAATGGGTCATCTCTTAG 59.400 44.000 0.00 0.00 0.00 2.18
738 741 5.293560 GTCTACAATGGGTCATCTCTTAGC 58.706 45.833 0.00 0.00 0.00 3.09
739 742 3.567478 ACAATGGGTCATCTCTTAGCC 57.433 47.619 0.00 0.00 0.00 3.93
740 743 3.118531 ACAATGGGTCATCTCTTAGCCT 58.881 45.455 0.00 0.00 34.30 4.58
741 744 3.525199 ACAATGGGTCATCTCTTAGCCTT 59.475 43.478 0.00 0.00 34.30 4.35
742 745 4.721776 ACAATGGGTCATCTCTTAGCCTTA 59.278 41.667 0.00 0.00 34.30 2.69
743 746 5.370880 ACAATGGGTCATCTCTTAGCCTTAT 59.629 40.000 0.00 0.00 34.30 1.73
744 747 5.753721 ATGGGTCATCTCTTAGCCTTATC 57.246 43.478 0.00 0.00 34.30 1.75
745 748 4.820775 TGGGTCATCTCTTAGCCTTATCT 58.179 43.478 0.00 0.00 34.30 1.98
746 749 5.219739 TGGGTCATCTCTTAGCCTTATCTT 58.780 41.667 0.00 0.00 34.30 2.40
747 750 5.667626 TGGGTCATCTCTTAGCCTTATCTTT 59.332 40.000 0.00 0.00 34.30 2.52
748 751 5.994668 GGGTCATCTCTTAGCCTTATCTTTG 59.005 44.000 0.00 0.00 0.00 2.77
749 752 6.183361 GGGTCATCTCTTAGCCTTATCTTTGA 60.183 42.308 0.00 0.00 0.00 2.69
750 753 7.449247 GGTCATCTCTTAGCCTTATCTTTGAT 58.551 38.462 0.00 0.00 0.00 2.57
751 754 8.589338 GGTCATCTCTTAGCCTTATCTTTGATA 58.411 37.037 0.00 0.00 0.00 2.15
752 755 9.988815 GTCATCTCTTAGCCTTATCTTTGATAA 57.011 33.333 0.00 0.00 0.00 1.75
753 756 9.988815 TCATCTCTTAGCCTTATCTTTGATAAC 57.011 33.333 0.00 0.00 0.00 1.89
754 757 9.995003 CATCTCTTAGCCTTATCTTTGATAACT 57.005 33.333 0.00 0.00 0.00 2.24
757 760 9.418045 CTCTTAGCCTTATCTTTGATAACTAGC 57.582 37.037 0.00 0.00 0.00 3.42
758 761 9.148879 TCTTAGCCTTATCTTTGATAACTAGCT 57.851 33.333 13.97 13.97 0.00 3.32
775 778 7.974482 AACTAGCTATTTCTAAAAACACGGT 57.026 32.000 0.00 0.00 0.00 4.83
776 779 7.360575 ACTAGCTATTTCTAAAAACACGGTG 57.639 36.000 6.58 6.58 0.00 4.94
777 780 7.156673 ACTAGCTATTTCTAAAAACACGGTGA 58.843 34.615 16.29 0.00 0.00 4.02
778 781 6.481954 AGCTATTTCTAAAAACACGGTGAG 57.518 37.500 16.29 1.00 0.00 3.51
779 782 6.228258 AGCTATTTCTAAAAACACGGTGAGA 58.772 36.000 16.29 3.67 0.00 3.27
780 783 6.147328 AGCTATTTCTAAAAACACGGTGAGAC 59.853 38.462 16.29 0.00 0.00 3.36
781 784 6.073440 GCTATTTCTAAAAACACGGTGAGACA 60.073 38.462 16.29 0.12 0.00 3.41
782 785 6.877611 ATTTCTAAAAACACGGTGAGACAT 57.122 33.333 16.29 2.61 0.00 3.06
783 786 7.972832 ATTTCTAAAAACACGGTGAGACATA 57.027 32.000 16.29 0.84 0.00 2.29
784 787 7.972832 TTTCTAAAAACACGGTGAGACATAT 57.027 32.000 16.29 0.00 0.00 1.78
785 788 7.972832 TTCTAAAAACACGGTGAGACATATT 57.027 32.000 16.29 2.82 0.00 1.28
786 789 7.359262 TCTAAAAACACGGTGAGACATATTG 57.641 36.000 16.29 0.00 0.00 1.90
787 790 6.932400 TCTAAAAACACGGTGAGACATATTGT 59.068 34.615 16.29 0.00 0.00 2.71
788 791 5.356882 AAAACACGGTGAGACATATTGTG 57.643 39.130 16.29 0.00 0.00 3.33
789 792 2.346803 ACACGGTGAGACATATTGTGC 58.653 47.619 16.29 0.00 0.00 4.57
790 793 2.028112 ACACGGTGAGACATATTGTGCT 60.028 45.455 16.29 0.00 0.00 4.40
791 794 3.194755 ACACGGTGAGACATATTGTGCTA 59.805 43.478 16.29 0.00 0.00 3.49
792 795 4.180817 CACGGTGAGACATATTGTGCTAA 58.819 43.478 0.74 0.00 0.00 3.09
793 796 4.268644 CACGGTGAGACATATTGTGCTAAG 59.731 45.833 0.74 0.00 0.00 2.18
794 797 4.159693 ACGGTGAGACATATTGTGCTAAGA 59.840 41.667 0.00 0.00 0.00 2.10
795 798 4.742167 CGGTGAGACATATTGTGCTAAGAG 59.258 45.833 0.00 0.00 0.00 2.85
796 799 5.450550 CGGTGAGACATATTGTGCTAAGAGA 60.451 44.000 0.00 0.00 0.00 3.10
797 800 6.520272 GGTGAGACATATTGTGCTAAGAGAT 58.480 40.000 0.00 0.00 0.00 2.75
798 801 6.644592 GGTGAGACATATTGTGCTAAGAGATC 59.355 42.308 0.00 0.00 0.00 2.75
799 802 7.205992 GTGAGACATATTGTGCTAAGAGATCA 58.794 38.462 0.00 0.00 0.00 2.92
800 803 7.871973 GTGAGACATATTGTGCTAAGAGATCAT 59.128 37.037 0.00 0.00 0.00 2.45
801 804 8.087136 TGAGACATATTGTGCTAAGAGATCATC 58.913 37.037 0.00 0.00 0.00 2.92
802 805 8.192743 AGACATATTGTGCTAAGAGATCATCT 57.807 34.615 0.00 0.00 41.27 2.90
804 807 9.270640 GACATATTGTGCTAAGAGATCATCTTT 57.729 33.333 11.16 0.00 46.49 2.52
805 808 9.624373 ACATATTGTGCTAAGAGATCATCTTTT 57.376 29.630 11.16 0.00 46.49 2.27
806 809 9.880064 CATATTGTGCTAAGAGATCATCTTTTG 57.120 33.333 11.16 7.50 46.49 2.44
807 810 7.934855 ATTGTGCTAAGAGATCATCTTTTGT 57.065 32.000 11.16 0.00 46.49 2.83
809 812 7.834068 TGTGCTAAGAGATCATCTTTTGTAC 57.166 36.000 11.16 12.85 46.49 2.90
810 813 7.386059 TGTGCTAAGAGATCATCTTTTGTACA 58.614 34.615 11.16 14.42 46.49 2.90
811 814 7.331934 TGTGCTAAGAGATCATCTTTTGTACAC 59.668 37.037 11.16 6.74 46.49 2.90
812 815 6.818644 TGCTAAGAGATCATCTTTTGTACACC 59.181 38.462 11.16 0.00 46.49 4.16
813 816 7.044798 GCTAAGAGATCATCTTTTGTACACCT 58.955 38.462 11.16 0.00 46.49 4.00
814 817 8.198109 GCTAAGAGATCATCTTTTGTACACCTA 58.802 37.037 11.16 0.00 46.49 3.08
817 820 9.965902 AAGAGATCATCTTTTGTACACCTATTT 57.034 29.630 0.00 0.00 46.49 1.40
844 847 3.981375 ACCTTAGGGTTTTGAGTTCCTCT 59.019 43.478 2.32 0.00 44.73 3.69
855 858 2.759973 TTCCTCTGGCGGCGAGAT 60.760 61.111 24.63 0.00 0.00 2.75
958 966 2.662070 CGGGATACGGTGGGGTTGT 61.662 63.158 0.00 0.00 39.42 3.32
963 971 2.553685 GGATACGGTGGGGTTGTTTCTT 60.554 50.000 0.00 0.00 0.00 2.52
1150 1158 1.596934 GTGGAGGCGAAGTGGATCA 59.403 57.895 0.00 0.00 0.00 2.92
1169 1177 5.009010 GGATCACGATTGCAAAAGTCCATAT 59.991 40.000 1.71 0.00 0.00 1.78
1179 1187 6.003950 TGCAAAAGTCCATATAGATAAGGGC 58.996 40.000 0.00 0.00 0.00 5.19
1304 1312 1.380302 GCCTGGGTGACTGGAACAT 59.620 57.895 0.00 0.00 40.42 2.71
1322 1330 2.124151 GGCGATGAACATGGGGCT 60.124 61.111 0.00 0.00 0.00 5.19
1371 1379 3.820467 TGATTGCGGAATATGATGGGTTC 59.180 43.478 0.71 0.00 0.00 3.62
1392 1400 4.910195 TCACGAACCCTACTTCTGTAGTA 58.090 43.478 0.00 0.00 43.38 1.82
1404 1412 8.095169 CCTACTTCTGTAGTACTGGACAAAATT 58.905 37.037 5.39 0.00 43.38 1.82
1484 1492 2.022035 AGGGGATGTGTAGGAAGATGGA 60.022 50.000 0.00 0.00 0.00 3.41
1543 1551 0.947960 TGCAGGCGAATTTGTTCGAA 59.052 45.000 14.00 0.00 46.52 3.71
1730 1740 1.214175 TGTTTCCAAGCTTGAGTGGGA 59.786 47.619 28.05 13.18 35.46 4.37
1783 1793 3.075005 GGAGAGGCCGTGGTGCTA 61.075 66.667 0.00 0.00 0.00 3.49
1785 1795 3.077556 AGAGGCCGTGGTGCTAGG 61.078 66.667 0.00 0.00 0.00 3.02
1805 1815 2.093658 GGCGAAATACAGGAAGAGGACA 60.094 50.000 0.00 0.00 0.00 4.02
1812 1822 1.974236 ACAGGAAGAGGACAAGGTGAG 59.026 52.381 0.00 0.00 0.00 3.51
1851 1861 2.529643 TTTGGTAGGGGCCGTGGA 60.530 61.111 9.43 0.00 0.00 4.02
2050 2063 6.542821 ACTCTATGAATCTGTTGGGAAAACA 58.457 36.000 0.00 0.00 0.00 2.83
2106 2119 2.359975 GTTCGTCCCTTGCCCTGG 60.360 66.667 0.00 0.00 0.00 4.45
2260 2273 3.550437 ACTGAGAATAGTGGATGGTGC 57.450 47.619 0.00 0.00 0.00 5.01
2354 2367 5.574891 TGCAATGAAAATTATAGCGTGGT 57.425 34.783 0.00 0.00 0.00 4.16
2636 2689 2.279918 GCGACAACGTGTCCTGGT 60.280 61.111 11.01 0.00 44.20 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.657487 CCGATGATTCGTCGTCCGG 60.657 63.158 22.85 8.15 43.97 5.14
1 2 0.040336 ATCCGATGATTCGTCGTCCG 60.040 55.000 22.85 10.94 43.97 4.79
2 3 1.001706 TCATCCGATGATTCGTCGTCC 60.002 52.381 22.85 0.00 43.97 4.79
6 7 4.507756 TCATTGTTCATCCGATGATTCGTC 59.492 41.667 11.90 0.00 43.97 4.20
8 9 5.007039 ACTTCATTGTTCATCCGATGATTCG 59.993 40.000 11.90 0.73 45.08 3.34
79 82 3.390135 TCGCAAGATCTTCGACACTTTT 58.610 40.909 19.37 0.00 45.01 2.27
98 101 2.579787 GCGTCTCCACCACGATCG 60.580 66.667 14.88 14.88 39.75 3.69
99 102 1.517257 CTGCGTCTCCACCACGATC 60.517 63.158 0.00 0.00 39.75 3.69
100 103 2.573869 CTGCGTCTCCACCACGAT 59.426 61.111 0.00 0.00 39.75 3.73
117 120 0.898320 TAGAGGTGCTCTTCACTGGC 59.102 55.000 0.54 0.00 44.98 4.85
119 122 2.165437 GAGGTAGAGGTGCTCTTCACTG 59.835 54.545 0.54 0.00 44.98 3.66
120 123 2.452505 GAGGTAGAGGTGCTCTTCACT 58.547 52.381 0.54 0.00 44.98 3.41
130 133 0.681564 CTGTGCGAGGAGGTAGAGGT 60.682 60.000 0.00 0.00 0.00 3.85
136 139 3.699894 CTGCCTGTGCGAGGAGGT 61.700 66.667 5.77 0.00 46.33 3.85
154 157 0.669318 TCAACGCTTCTACGGGCTTG 60.669 55.000 0.00 0.00 37.37 4.01
156 159 1.080025 GTCAACGCTTCTACGGGCT 60.080 57.895 0.00 0.00 37.37 5.19
160 163 1.393597 CGACCGTCAACGCTTCTACG 61.394 60.000 0.00 0.00 38.18 3.51
184 187 2.928396 CCCAACACCGTCCTCCCT 60.928 66.667 0.00 0.00 0.00 4.20
185 188 4.029809 CCCCAACACCGTCCTCCC 62.030 72.222 0.00 0.00 0.00 4.30
188 191 3.622826 CGACCCCAACACCGTCCT 61.623 66.667 0.00 0.00 0.00 3.85
194 197 2.750237 GCCCATCGACCCCAACAC 60.750 66.667 0.00 0.00 0.00 3.32
216 219 1.375523 GAGAAACCACGGCCGTCAT 60.376 57.895 31.80 17.37 0.00 3.06
217 220 2.029964 GAGAAACCACGGCCGTCA 59.970 61.111 31.80 0.00 0.00 4.35
221 224 0.672711 GTACCAGAGAAACCACGGCC 60.673 60.000 0.00 0.00 0.00 6.13
243 246 2.254350 GGTTTTTGTCGCCGCCTC 59.746 61.111 0.00 0.00 0.00 4.70
246 249 2.354188 GTGGGTTTTTGTCGCCGC 60.354 61.111 0.00 0.00 0.00 6.53
247 250 0.179134 TTTGTGGGTTTTTGTCGCCG 60.179 50.000 0.00 0.00 0.00 6.46
248 251 1.282817 GTTTGTGGGTTTTTGTCGCC 58.717 50.000 0.00 0.00 0.00 5.54
249 252 0.917939 CGTTTGTGGGTTTTTGTCGC 59.082 50.000 0.00 0.00 0.00 5.19
250 253 0.917939 GCGTTTGTGGGTTTTTGTCG 59.082 50.000 0.00 0.00 0.00 4.35
251 254 1.282817 GGCGTTTGTGGGTTTTTGTC 58.717 50.000 0.00 0.00 0.00 3.18
252 255 0.458716 CGGCGTTTGTGGGTTTTTGT 60.459 50.000 0.00 0.00 0.00 2.83
253 256 1.148759 CCGGCGTTTGTGGGTTTTTG 61.149 55.000 6.01 0.00 0.00 2.44
254 257 1.142097 CCGGCGTTTGTGGGTTTTT 59.858 52.632 6.01 0.00 0.00 1.94
255 258 2.809010 CCGGCGTTTGTGGGTTTT 59.191 55.556 6.01 0.00 0.00 2.43
256 259 3.906879 GCCGGCGTTTGTGGGTTT 61.907 61.111 12.58 0.00 0.00 3.27
259 262 4.341502 CTTGCCGGCGTTTGTGGG 62.342 66.667 23.90 1.14 0.00 4.61
260 263 2.840066 TTCTTGCCGGCGTTTGTGG 61.840 57.895 23.90 6.35 0.00 4.17
261 264 1.657181 GTTCTTGCCGGCGTTTGTG 60.657 57.895 23.90 7.85 0.00 3.33
262 265 1.782028 GAGTTCTTGCCGGCGTTTGT 61.782 55.000 23.90 4.04 0.00 2.83
263 266 1.082104 GAGTTCTTGCCGGCGTTTG 60.082 57.895 23.90 11.64 0.00 2.93
264 267 2.258726 GGAGTTCTTGCCGGCGTTT 61.259 57.895 23.90 3.41 0.00 3.60
265 268 2.668550 GGAGTTCTTGCCGGCGTT 60.669 61.111 23.90 2.59 0.00 4.84
266 269 3.626924 AGGAGTTCTTGCCGGCGT 61.627 61.111 23.90 0.84 0.00 5.68
267 270 3.121030 CAGGAGTTCTTGCCGGCG 61.121 66.667 23.90 8.74 0.00 6.46
268 271 3.435186 GCAGGAGTTCTTGCCGGC 61.435 66.667 22.73 22.73 42.31 6.13
269 272 1.172180 TTTGCAGGAGTTCTTGCCGG 61.172 55.000 12.82 0.00 46.80 6.13
270 273 0.667993 TTTTGCAGGAGTTCTTGCCG 59.332 50.000 12.82 0.00 46.80 5.69
271 274 2.888834 TTTTTGCAGGAGTTCTTGCC 57.111 45.000 12.82 0.00 46.80 4.52
273 276 4.589216 TCCATTTTTGCAGGAGTTCTTG 57.411 40.909 0.00 0.00 0.00 3.02
274 277 4.039609 CCTTCCATTTTTGCAGGAGTTCTT 59.960 41.667 0.00 0.00 32.11 2.52
275 278 3.575687 CCTTCCATTTTTGCAGGAGTTCT 59.424 43.478 0.00 0.00 32.11 3.01
276 279 3.306294 CCCTTCCATTTTTGCAGGAGTTC 60.306 47.826 0.00 0.00 32.11 3.01
277 280 2.634453 CCCTTCCATTTTTGCAGGAGTT 59.366 45.455 0.00 0.00 32.11 3.01
278 281 2.250924 CCCTTCCATTTTTGCAGGAGT 58.749 47.619 0.00 0.00 32.11 3.85
279 282 1.551883 CCCCTTCCATTTTTGCAGGAG 59.448 52.381 0.00 0.00 32.11 3.69
280 283 1.643310 CCCCTTCCATTTTTGCAGGA 58.357 50.000 0.00 0.00 0.00 3.86
281 284 0.036105 GCCCCTTCCATTTTTGCAGG 60.036 55.000 0.00 0.00 0.00 4.85
282 285 0.686224 TGCCCCTTCCATTTTTGCAG 59.314 50.000 0.00 0.00 0.00 4.41
283 286 0.686224 CTGCCCCTTCCATTTTTGCA 59.314 50.000 0.00 0.00 0.00 4.08
284 287 0.686789 ACTGCCCCTTCCATTTTTGC 59.313 50.000 0.00 0.00 0.00 3.68
285 288 1.002315 CCACTGCCCCTTCCATTTTTG 59.998 52.381 0.00 0.00 0.00 2.44
286 289 1.351076 CCACTGCCCCTTCCATTTTT 58.649 50.000 0.00 0.00 0.00 1.94
287 290 0.545071 CCCACTGCCCCTTCCATTTT 60.545 55.000 0.00 0.00 0.00 1.82
288 291 1.079073 CCCACTGCCCCTTCCATTT 59.921 57.895 0.00 0.00 0.00 2.32
289 292 1.224003 ATCCCACTGCCCCTTCCATT 61.224 55.000 0.00 0.00 0.00 3.16
290 293 1.224003 AATCCCACTGCCCCTTCCAT 61.224 55.000 0.00 0.00 0.00 3.41
291 294 1.856873 AATCCCACTGCCCCTTCCA 60.857 57.895 0.00 0.00 0.00 3.53
292 295 1.380380 CAATCCCACTGCCCCTTCC 60.380 63.158 0.00 0.00 0.00 3.46
293 296 0.967380 CACAATCCCACTGCCCCTTC 60.967 60.000 0.00 0.00 0.00 3.46
294 297 1.077265 CACAATCCCACTGCCCCTT 59.923 57.895 0.00 0.00 0.00 3.95
295 298 2.162906 ACACAATCCCACTGCCCCT 61.163 57.895 0.00 0.00 0.00 4.79
296 299 1.978617 CACACAATCCCACTGCCCC 60.979 63.158 0.00 0.00 0.00 5.80
297 300 2.639327 GCACACAATCCCACTGCCC 61.639 63.158 0.00 0.00 0.00 5.36
298 301 1.252904 ATGCACACAATCCCACTGCC 61.253 55.000 0.00 0.00 0.00 4.85
299 302 0.108992 CATGCACACAATCCCACTGC 60.109 55.000 0.00 0.00 0.00 4.40
300 303 0.108992 GCATGCACACAATCCCACTG 60.109 55.000 14.21 0.00 0.00 3.66
301 304 1.588824 CGCATGCACACAATCCCACT 61.589 55.000 19.57 0.00 0.00 4.00
302 305 1.153978 CGCATGCACACAATCCCAC 60.154 57.895 19.57 0.00 0.00 4.61
303 306 1.177895 AACGCATGCACACAATCCCA 61.178 50.000 19.57 0.00 0.00 4.37
304 307 0.733566 CAACGCATGCACACAATCCC 60.734 55.000 19.57 0.00 0.00 3.85
305 308 0.733566 CCAACGCATGCACACAATCC 60.734 55.000 19.57 0.00 0.00 3.01
306 309 0.733566 CCCAACGCATGCACACAATC 60.734 55.000 19.57 0.00 0.00 2.67
307 310 1.289694 CCCAACGCATGCACACAAT 59.710 52.632 19.57 0.00 0.00 2.71
308 311 2.726909 CCCAACGCATGCACACAA 59.273 55.556 19.57 0.00 0.00 3.33
309 312 3.293714 CCCCAACGCATGCACACA 61.294 61.111 19.57 0.00 0.00 3.72
310 313 4.722855 GCCCCAACGCATGCACAC 62.723 66.667 19.57 0.00 0.00 3.82
311 314 4.972733 AGCCCCAACGCATGCACA 62.973 61.111 19.57 0.00 0.00 4.57
312 315 3.683937 AAGCCCCAACGCATGCAC 61.684 61.111 19.57 0.00 0.00 4.57
313 316 3.682885 CAAGCCCCAACGCATGCA 61.683 61.111 19.57 0.00 0.00 3.96
314 317 4.440127 CCAAGCCCCAACGCATGC 62.440 66.667 7.91 7.91 0.00 4.06
315 318 3.762247 CCCAAGCCCCAACGCATG 61.762 66.667 0.00 0.00 0.00 4.06
335 338 3.799755 GTCGTTGTCCATGCCGGC 61.800 66.667 22.73 22.73 33.14 6.13
336 339 2.358125 TGTCGTTGTCCATGCCGG 60.358 61.111 0.00 0.00 0.00 6.13
337 340 1.354337 CTCTGTCGTTGTCCATGCCG 61.354 60.000 0.00 0.00 0.00 5.69
338 341 0.320771 ACTCTGTCGTTGTCCATGCC 60.321 55.000 0.00 0.00 0.00 4.40
339 342 0.792640 CACTCTGTCGTTGTCCATGC 59.207 55.000 0.00 0.00 0.00 4.06
340 343 1.432514 CCACTCTGTCGTTGTCCATG 58.567 55.000 0.00 0.00 0.00 3.66
341 344 0.320771 GCCACTCTGTCGTTGTCCAT 60.321 55.000 0.00 0.00 0.00 3.41
342 345 1.069090 GCCACTCTGTCGTTGTCCA 59.931 57.895 0.00 0.00 0.00 4.02
343 346 1.668151 GGCCACTCTGTCGTTGTCC 60.668 63.158 0.00 0.00 0.00 4.02
344 347 0.946221 CTGGCCACTCTGTCGTTGTC 60.946 60.000 0.00 0.00 0.00 3.18
345 348 1.069765 CTGGCCACTCTGTCGTTGT 59.930 57.895 0.00 0.00 0.00 3.32
346 349 0.249868 TTCTGGCCACTCTGTCGTTG 60.250 55.000 0.00 0.00 0.00 4.10
347 350 0.468226 TTTCTGGCCACTCTGTCGTT 59.532 50.000 0.00 0.00 0.00 3.85
348 351 0.468226 TTTTCTGGCCACTCTGTCGT 59.532 50.000 0.00 0.00 0.00 4.34
349 352 1.466167 CATTTTCTGGCCACTCTGTCG 59.534 52.381 0.00 0.00 0.00 4.35
350 353 1.815003 CCATTTTCTGGCCACTCTGTC 59.185 52.381 0.00 0.00 38.47 3.51
351 354 1.548582 CCCATTTTCTGGCCACTCTGT 60.549 52.381 0.00 0.00 44.46 3.41
352 355 1.180029 CCCATTTTCTGGCCACTCTG 58.820 55.000 0.00 0.00 44.46 3.35
353 356 0.613012 GCCCATTTTCTGGCCACTCT 60.613 55.000 0.00 0.00 44.46 3.24
354 357 1.893062 GCCCATTTTCTGGCCACTC 59.107 57.895 0.00 0.00 44.46 3.51
355 358 1.978617 CGCCCATTTTCTGGCCACT 60.979 57.895 0.00 0.00 45.07 4.00
356 359 2.573340 CGCCCATTTTCTGGCCAC 59.427 61.111 0.00 0.00 45.07 5.01
357 360 2.679642 CCGCCCATTTTCTGGCCA 60.680 61.111 4.71 4.71 45.07 5.36
358 361 2.679996 ACCGCCCATTTTCTGGCC 60.680 61.111 0.00 0.00 45.07 5.36
359 362 1.322538 ATCACCGCCCATTTTCTGGC 61.323 55.000 0.00 0.00 44.46 4.85
360 363 0.457035 CATCACCGCCCATTTTCTGG 59.543 55.000 0.00 0.00 45.51 3.86
361 364 0.457035 CCATCACCGCCCATTTTCTG 59.543 55.000 0.00 0.00 0.00 3.02
362 365 1.322538 GCCATCACCGCCCATTTTCT 61.323 55.000 0.00 0.00 0.00 2.52
363 366 1.141665 GCCATCACCGCCCATTTTC 59.858 57.895 0.00 0.00 0.00 2.29
364 367 0.033601 TAGCCATCACCGCCCATTTT 60.034 50.000 0.00 0.00 0.00 1.82
365 368 0.185901 ATAGCCATCACCGCCCATTT 59.814 50.000 0.00 0.00 0.00 2.32
366 369 0.538057 CATAGCCATCACCGCCCATT 60.538 55.000 0.00 0.00 0.00 3.16
367 370 1.073722 CATAGCCATCACCGCCCAT 59.926 57.895 0.00 0.00 0.00 4.00
368 371 2.069430 TCATAGCCATCACCGCCCA 61.069 57.895 0.00 0.00 0.00 5.36
369 372 1.598130 GTCATAGCCATCACCGCCC 60.598 63.158 0.00 0.00 0.00 6.13
370 373 1.598130 GGTCATAGCCATCACCGCC 60.598 63.158 0.00 0.00 0.00 6.13
371 374 1.956170 CGGTCATAGCCATCACCGC 60.956 63.158 0.00 0.00 44.88 5.68
372 375 4.343581 CGGTCATAGCCATCACCG 57.656 61.111 0.00 0.00 45.38 4.94
373 376 1.071471 CCCGGTCATAGCCATCACC 59.929 63.158 0.00 0.00 0.00 4.02
374 377 1.071471 CCCCGGTCATAGCCATCAC 59.929 63.158 0.00 0.00 0.00 3.06
375 378 2.146724 CCCCCGGTCATAGCCATCA 61.147 63.158 0.00 0.00 0.00 3.07
376 379 2.750350 CCCCCGGTCATAGCCATC 59.250 66.667 0.00 0.00 0.00 3.51
391 394 0.697854 TTTCCCTATGAGGCTCCCCC 60.698 60.000 12.86 0.00 32.73 5.40
392 395 0.767998 CTTTCCCTATGAGGCTCCCC 59.232 60.000 12.86 0.00 32.73 4.81
393 396 0.767998 CCTTTCCCTATGAGGCTCCC 59.232 60.000 12.86 0.00 32.73 4.30
394 397 1.807814 TCCTTTCCCTATGAGGCTCC 58.192 55.000 12.86 0.00 32.73 4.70
395 398 3.933861 TTTCCTTTCCCTATGAGGCTC 57.066 47.619 7.79 7.79 32.73 4.70
396 399 4.675063 TTTTTCCTTTCCCTATGAGGCT 57.325 40.909 0.00 0.00 32.73 4.58
397 400 4.442052 GCATTTTTCCTTTCCCTATGAGGC 60.442 45.833 0.00 0.00 32.73 4.70
398 401 4.202050 CGCATTTTTCCTTTCCCTATGAGG 60.202 45.833 0.00 0.00 34.30 3.86
399 402 4.202050 CCGCATTTTTCCTTTCCCTATGAG 60.202 45.833 0.00 0.00 0.00 2.90
400 403 3.699038 CCGCATTTTTCCTTTCCCTATGA 59.301 43.478 0.00 0.00 0.00 2.15
401 404 3.699038 TCCGCATTTTTCCTTTCCCTATG 59.301 43.478 0.00 0.00 0.00 2.23
402 405 3.699538 GTCCGCATTTTTCCTTTCCCTAT 59.300 43.478 0.00 0.00 0.00 2.57
403 406 3.086282 GTCCGCATTTTTCCTTTCCCTA 58.914 45.455 0.00 0.00 0.00 3.53
404 407 1.893137 GTCCGCATTTTTCCTTTCCCT 59.107 47.619 0.00 0.00 0.00 4.20
405 408 1.893137 AGTCCGCATTTTTCCTTTCCC 59.107 47.619 0.00 0.00 0.00 3.97
406 409 2.296190 ACAGTCCGCATTTTTCCTTTCC 59.704 45.455 0.00 0.00 0.00 3.13
407 410 3.643159 ACAGTCCGCATTTTTCCTTTC 57.357 42.857 0.00 0.00 0.00 2.62
408 411 4.400529 AAACAGTCCGCATTTTTCCTTT 57.599 36.364 0.00 0.00 0.00 3.11
409 412 4.400529 AAAACAGTCCGCATTTTTCCTT 57.599 36.364 0.00 0.00 0.00 3.36
410 413 4.261867 GGTAAAACAGTCCGCATTTTTCCT 60.262 41.667 0.00 0.00 32.80 3.36
411 414 3.985279 GGTAAAACAGTCCGCATTTTTCC 59.015 43.478 0.00 0.00 0.00 3.13
412 415 4.612943 TGGTAAAACAGTCCGCATTTTTC 58.387 39.130 0.00 0.00 0.00 2.29
413 416 4.657436 TGGTAAAACAGTCCGCATTTTT 57.343 36.364 0.00 0.00 0.00 1.94
414 417 4.142138 TGTTGGTAAAACAGTCCGCATTTT 60.142 37.500 0.00 0.00 0.00 1.82
415 418 3.381908 TGTTGGTAAAACAGTCCGCATTT 59.618 39.130 0.00 0.00 0.00 2.32
416 419 2.952978 TGTTGGTAAAACAGTCCGCATT 59.047 40.909 0.00 0.00 0.00 3.56
417 420 2.577700 TGTTGGTAAAACAGTCCGCAT 58.422 42.857 0.00 0.00 0.00 4.73
418 421 2.039818 TGTTGGTAAAACAGTCCGCA 57.960 45.000 0.00 0.00 0.00 5.69
419 422 2.287368 CCTTGTTGGTAAAACAGTCCGC 60.287 50.000 0.00 0.00 0.00 5.54
420 423 2.292292 CCCTTGTTGGTAAAACAGTCCG 59.708 50.000 0.00 0.00 0.00 4.79
421 424 3.558033 TCCCTTGTTGGTAAAACAGTCC 58.442 45.455 0.00 0.00 0.00 3.85
422 425 3.004419 GCTCCCTTGTTGGTAAAACAGTC 59.996 47.826 0.00 0.00 0.00 3.51
423 426 2.956333 GCTCCCTTGTTGGTAAAACAGT 59.044 45.455 0.00 0.00 0.00 3.55
424 427 2.296190 GGCTCCCTTGTTGGTAAAACAG 59.704 50.000 0.00 0.00 0.00 3.16
425 428 2.312390 GGCTCCCTTGTTGGTAAAACA 58.688 47.619 0.00 0.00 0.00 2.83
426 429 2.296190 CTGGCTCCCTTGTTGGTAAAAC 59.704 50.000 0.00 0.00 0.00 2.43
427 430 2.175931 TCTGGCTCCCTTGTTGGTAAAA 59.824 45.455 0.00 0.00 0.00 1.52
428 431 1.777878 TCTGGCTCCCTTGTTGGTAAA 59.222 47.619 0.00 0.00 0.00 2.01
429 432 1.351017 CTCTGGCTCCCTTGTTGGTAA 59.649 52.381 0.00 0.00 0.00 2.85
430 433 0.984230 CTCTGGCTCCCTTGTTGGTA 59.016 55.000 0.00 0.00 0.00 3.25
431 434 1.763770 CTCTGGCTCCCTTGTTGGT 59.236 57.895 0.00 0.00 0.00 3.67
432 435 1.001641 CCTCTGGCTCCCTTGTTGG 60.002 63.158 0.00 0.00 0.00 3.77
433 436 0.035630 CTCCTCTGGCTCCCTTGTTG 60.036 60.000 0.00 0.00 0.00 3.33
434 437 1.204113 CCTCCTCTGGCTCCCTTGTT 61.204 60.000 0.00 0.00 0.00 2.83
435 438 1.614824 CCTCCTCTGGCTCCCTTGT 60.615 63.158 0.00 0.00 0.00 3.16
436 439 1.306482 TCCTCCTCTGGCTCCCTTG 60.306 63.158 0.00 0.00 0.00 3.61
437 440 1.306568 GTCCTCCTCTGGCTCCCTT 60.307 63.158 0.00 0.00 0.00 3.95
438 441 2.112072 TTGTCCTCCTCTGGCTCCCT 62.112 60.000 0.00 0.00 0.00 4.20
439 442 1.201429 TTTGTCCTCCTCTGGCTCCC 61.201 60.000 0.00 0.00 0.00 4.30
440 443 0.693049 TTTTGTCCTCCTCTGGCTCC 59.307 55.000 0.00 0.00 0.00 4.70
441 444 1.625818 TCTTTTGTCCTCCTCTGGCTC 59.374 52.381 0.00 0.00 0.00 4.70
442 445 1.627834 CTCTTTTGTCCTCCTCTGGCT 59.372 52.381 0.00 0.00 0.00 4.75
443 446 1.339535 CCTCTTTTGTCCTCCTCTGGC 60.340 57.143 0.00 0.00 0.00 4.85
444 447 1.280421 CCCTCTTTTGTCCTCCTCTGG 59.720 57.143 0.00 0.00 0.00 3.86
445 448 1.981495 ACCCTCTTTTGTCCTCCTCTG 59.019 52.381 0.00 0.00 0.00 3.35
446 449 2.261729 GACCCTCTTTTGTCCTCCTCT 58.738 52.381 0.00 0.00 0.00 3.69
447 450 1.279558 GGACCCTCTTTTGTCCTCCTC 59.720 57.143 1.51 0.00 46.13 3.71
448 451 1.363246 GGACCCTCTTTTGTCCTCCT 58.637 55.000 1.51 0.00 46.13 3.69
449 452 3.959433 GGACCCTCTTTTGTCCTCC 57.041 57.895 1.51 0.00 46.13 4.30
452 455 3.268330 GAATACGGACCCTCTTTTGTCC 58.732 50.000 0.00 0.00 46.15 4.02
453 456 2.928116 CGAATACGGACCCTCTTTTGTC 59.072 50.000 0.00 0.00 35.72 3.18
454 457 2.301009 ACGAATACGGACCCTCTTTTGT 59.699 45.455 0.00 0.00 44.46 2.83
455 458 2.928116 GACGAATACGGACCCTCTTTTG 59.072 50.000 0.00 0.00 44.46 2.44
456 459 2.830321 AGACGAATACGGACCCTCTTTT 59.170 45.455 0.00 0.00 44.46 2.27
457 460 2.165845 CAGACGAATACGGACCCTCTTT 59.834 50.000 0.00 0.00 44.46 2.52
458 461 1.749634 CAGACGAATACGGACCCTCTT 59.250 52.381 0.00 0.00 44.46 2.85
459 462 1.390565 CAGACGAATACGGACCCTCT 58.609 55.000 0.00 0.00 44.46 3.69
460 463 0.248949 GCAGACGAATACGGACCCTC 60.249 60.000 0.00 0.00 44.46 4.30
461 464 1.814527 GCAGACGAATACGGACCCT 59.185 57.895 0.00 0.00 44.46 4.34
462 465 1.588139 CGCAGACGAATACGGACCC 60.588 63.158 0.00 0.00 43.93 4.46
463 466 2.228914 GCGCAGACGAATACGGACC 61.229 63.158 0.30 0.00 43.93 4.46
464 467 2.228914 GGCGCAGACGAATACGGAC 61.229 63.158 10.83 0.00 43.93 4.79
465 468 2.103538 GGCGCAGACGAATACGGA 59.896 61.111 10.83 0.00 43.93 4.69
466 469 2.960129 GGGCGCAGACGAATACGG 60.960 66.667 10.83 0.00 43.93 4.02
467 470 2.104331 AGGGCGCAGACGAATACG 59.896 61.111 10.83 0.00 43.93 3.06
468 471 1.146358 GACAGGGCGCAGACGAATAC 61.146 60.000 10.83 0.00 43.93 1.89
469 472 1.141019 GACAGGGCGCAGACGAATA 59.859 57.895 10.83 0.00 43.93 1.75
470 473 2.125512 GACAGGGCGCAGACGAAT 60.126 61.111 10.83 0.00 43.93 3.34
471 474 3.303135 AGACAGGGCGCAGACGAA 61.303 61.111 10.83 0.00 43.93 3.85
472 475 4.056125 CAGACAGGGCGCAGACGA 62.056 66.667 10.83 0.00 43.93 4.20
473 476 3.865929 AACAGACAGGGCGCAGACG 62.866 63.158 10.83 0.00 33.41 4.18
474 477 1.166531 AAAACAGACAGGGCGCAGAC 61.167 55.000 10.83 0.00 0.00 3.51
475 478 1.148273 AAAACAGACAGGGCGCAGA 59.852 52.632 10.83 0.00 0.00 4.26
476 479 1.165907 TCAAAACAGACAGGGCGCAG 61.166 55.000 10.83 0.00 0.00 5.18
477 480 1.153066 TCAAAACAGACAGGGCGCA 60.153 52.632 10.83 0.00 0.00 6.09
478 481 1.282875 GTCAAAACAGACAGGGCGC 59.717 57.895 0.00 0.00 38.40 6.53
479 482 1.569493 CGTCAAAACAGACAGGGCG 59.431 57.895 0.00 0.00 38.43 6.13
480 483 1.282875 GCGTCAAAACAGACAGGGC 59.717 57.895 0.00 0.00 38.43 5.19
481 484 1.002468 CTTGCGTCAAAACAGACAGGG 60.002 52.381 0.00 0.00 38.43 4.45
482 485 1.597937 GCTTGCGTCAAAACAGACAGG 60.598 52.381 0.00 0.00 38.43 4.00
483 486 1.746760 GCTTGCGTCAAAACAGACAG 58.253 50.000 0.00 0.00 38.43 3.51
484 487 0.027455 CGCTTGCGTCAAAACAGACA 59.973 50.000 6.86 0.00 38.43 3.41
485 488 1.262166 GCGCTTGCGTCAAAACAGAC 61.262 55.000 16.38 0.00 35.19 3.51
486 489 1.010125 GCGCTTGCGTCAAAACAGA 60.010 52.632 16.38 0.00 0.00 3.41
487 490 3.514546 GCGCTTGCGTCAAAACAG 58.485 55.556 16.38 0.00 0.00 3.16
497 500 0.641783 CAAATTTGGATCGCGCTTGC 59.358 50.000 10.49 0.00 0.00 4.01
498 501 2.261037 TCAAATTTGGATCGCGCTTG 57.739 45.000 17.90 0.00 0.00 4.01
499 502 2.595386 GTTCAAATTTGGATCGCGCTT 58.405 42.857 17.90 0.00 0.00 4.68
500 503 1.135402 GGTTCAAATTTGGATCGCGCT 60.135 47.619 17.90 0.00 0.00 5.92
501 504 1.268265 GGTTCAAATTTGGATCGCGC 58.732 50.000 17.90 0.00 0.00 6.86
502 505 1.129624 TCGGTTCAAATTTGGATCGCG 59.870 47.619 24.52 15.37 0.00 5.87
503 506 2.911819 TCGGTTCAAATTTGGATCGC 57.088 45.000 24.52 2.33 0.00 4.58
504 507 7.804614 TTATTTTCGGTTCAAATTTGGATCG 57.195 32.000 23.57 23.57 0.00 3.69
506 509 8.868916 CGATTTATTTTCGGTTCAAATTTGGAT 58.131 29.630 17.90 0.00 33.05 3.41
507 510 8.082852 TCGATTTATTTTCGGTTCAAATTTGGA 58.917 29.630 17.90 6.72 37.22 3.53
508 511 8.233692 TCGATTTATTTTCGGTTCAAATTTGG 57.766 30.769 17.90 2.25 37.22 3.28
509 512 8.372521 CCTCGATTTATTTTCGGTTCAAATTTG 58.627 33.333 12.15 12.15 37.22 2.32
510 513 8.301002 TCCTCGATTTATTTTCGGTTCAAATTT 58.699 29.630 0.00 0.00 37.22 1.82
511 514 7.753580 GTCCTCGATTTATTTTCGGTTCAAATT 59.246 33.333 0.00 0.00 37.22 1.82
512 515 7.248437 GTCCTCGATTTATTTTCGGTTCAAAT 58.752 34.615 0.00 0.00 37.22 2.32
513 516 6.604930 GTCCTCGATTTATTTTCGGTTCAAA 58.395 36.000 0.00 0.00 37.22 2.69
514 517 5.163933 CGTCCTCGATTTATTTTCGGTTCAA 60.164 40.000 0.00 0.00 39.71 2.69
515 518 4.327898 CGTCCTCGATTTATTTTCGGTTCA 59.672 41.667 0.00 0.00 39.71 3.18
516 519 4.260091 CCGTCCTCGATTTATTTTCGGTTC 60.260 45.833 0.00 0.00 39.71 3.62
517 520 3.619929 CCGTCCTCGATTTATTTTCGGTT 59.380 43.478 0.00 0.00 39.71 4.44
518 521 3.119029 TCCGTCCTCGATTTATTTTCGGT 60.119 43.478 0.00 0.00 39.71 4.69
519 522 3.244579 GTCCGTCCTCGATTTATTTTCGG 59.755 47.826 0.00 0.00 39.71 4.30
520 523 3.861113 TGTCCGTCCTCGATTTATTTTCG 59.139 43.478 0.00 0.00 39.71 3.46
521 524 5.789710 TTGTCCGTCCTCGATTTATTTTC 57.210 39.130 0.00 0.00 39.71 2.29
522 525 6.563222 TTTTGTCCGTCCTCGATTTATTTT 57.437 33.333 0.00 0.00 39.71 1.82
523 526 6.563222 TTTTTGTCCGTCCTCGATTTATTT 57.437 33.333 0.00 0.00 39.71 1.40
543 546 5.339990 CAAACAGATCACCAGTTCGTTTTT 58.660 37.500 0.00 0.00 0.00 1.94
544 547 4.733523 GCAAACAGATCACCAGTTCGTTTT 60.734 41.667 0.00 0.00 0.00 2.43
545 548 3.243068 GCAAACAGATCACCAGTTCGTTT 60.243 43.478 0.00 0.00 0.00 3.60
546 549 2.290641 GCAAACAGATCACCAGTTCGTT 59.709 45.455 0.00 0.00 0.00 3.85
547 550 1.873591 GCAAACAGATCACCAGTTCGT 59.126 47.619 0.00 0.00 0.00 3.85
548 551 2.146342 AGCAAACAGATCACCAGTTCG 58.854 47.619 0.00 0.00 0.00 3.95
549 552 4.574599 AAAGCAAACAGATCACCAGTTC 57.425 40.909 0.00 0.00 0.00 3.01
550 553 6.655078 ATAAAAGCAAACAGATCACCAGTT 57.345 33.333 0.00 0.00 0.00 3.16
551 554 6.449698 CAATAAAAGCAAACAGATCACCAGT 58.550 36.000 0.00 0.00 0.00 4.00
552 555 5.865552 CCAATAAAAGCAAACAGATCACCAG 59.134 40.000 0.00 0.00 0.00 4.00
553 556 5.538053 TCCAATAAAAGCAAACAGATCACCA 59.462 36.000 0.00 0.00 0.00 4.17
554 557 5.863935 GTCCAATAAAAGCAAACAGATCACC 59.136 40.000 0.00 0.00 0.00 4.02
555 558 5.863935 GGTCCAATAAAAGCAAACAGATCAC 59.136 40.000 0.00 0.00 0.00 3.06
556 559 5.335583 CGGTCCAATAAAAGCAAACAGATCA 60.336 40.000 0.00 0.00 0.00 2.92
557 560 5.095490 CGGTCCAATAAAAGCAAACAGATC 58.905 41.667 0.00 0.00 0.00 2.75
558 561 4.522789 ACGGTCCAATAAAAGCAAACAGAT 59.477 37.500 0.00 0.00 0.00 2.90
559 562 3.886505 ACGGTCCAATAAAAGCAAACAGA 59.113 39.130 0.00 0.00 0.00 3.41
560 563 3.980775 CACGGTCCAATAAAAGCAAACAG 59.019 43.478 0.00 0.00 0.00 3.16
561 564 3.632604 TCACGGTCCAATAAAAGCAAACA 59.367 39.130 0.00 0.00 0.00 2.83
562 565 4.231718 TCACGGTCCAATAAAAGCAAAC 57.768 40.909 0.00 0.00 0.00 2.93
563 566 5.461032 AATCACGGTCCAATAAAAGCAAA 57.539 34.783 0.00 0.00 0.00 3.68
564 567 5.221342 ACAAATCACGGTCCAATAAAAGCAA 60.221 36.000 0.00 0.00 0.00 3.91
565 568 4.279671 ACAAATCACGGTCCAATAAAAGCA 59.720 37.500 0.00 0.00 0.00 3.91
566 569 4.621034 CACAAATCACGGTCCAATAAAAGC 59.379 41.667 0.00 0.00 0.00 3.51
567 570 5.768317 ACACAAATCACGGTCCAATAAAAG 58.232 37.500 0.00 0.00 0.00 2.27
568 571 5.776173 ACACAAATCACGGTCCAATAAAA 57.224 34.783 0.00 0.00 0.00 1.52
569 572 5.776173 AACACAAATCACGGTCCAATAAA 57.224 34.783 0.00 0.00 0.00 1.40
570 573 5.067936 ACAAACACAAATCACGGTCCAATAA 59.932 36.000 0.00 0.00 0.00 1.40
571 574 4.580995 ACAAACACAAATCACGGTCCAATA 59.419 37.500 0.00 0.00 0.00 1.90
572 575 3.383185 ACAAACACAAATCACGGTCCAAT 59.617 39.130 0.00 0.00 0.00 3.16
573 576 2.755655 ACAAACACAAATCACGGTCCAA 59.244 40.909 0.00 0.00 0.00 3.53
574 577 2.370349 ACAAACACAAATCACGGTCCA 58.630 42.857 0.00 0.00 0.00 4.02
575 578 3.430333 AACAAACACAAATCACGGTCC 57.570 42.857 0.00 0.00 0.00 4.46
576 579 3.549873 CCAAACAAACACAAATCACGGTC 59.450 43.478 0.00 0.00 0.00 4.79
577 580 3.516615 CCAAACAAACACAAATCACGGT 58.483 40.909 0.00 0.00 0.00 4.83
578 581 2.283884 GCCAAACAAACACAAATCACGG 59.716 45.455 0.00 0.00 0.00 4.94
579 582 2.283884 GGCCAAACAAACACAAATCACG 59.716 45.455 0.00 0.00 0.00 4.35
580 583 3.530535 AGGCCAAACAAACACAAATCAC 58.469 40.909 5.01 0.00 0.00 3.06
581 584 3.196469 TGAGGCCAAACAAACACAAATCA 59.804 39.130 5.01 0.00 0.00 2.57
582 585 3.791245 TGAGGCCAAACAAACACAAATC 58.209 40.909 5.01 0.00 0.00 2.17
583 586 3.902881 TGAGGCCAAACAAACACAAAT 57.097 38.095 5.01 0.00 0.00 2.32
584 587 3.685139 TTGAGGCCAAACAAACACAAA 57.315 38.095 5.01 0.00 0.00 2.83
585 588 3.685139 TTTGAGGCCAAACAAACACAA 57.315 38.095 5.01 0.00 37.36 3.33
594 597 0.179097 GCCGTTTGTTTGAGGCCAAA 60.179 50.000 5.01 0.00 43.54 3.28
595 598 1.439644 GCCGTTTGTTTGAGGCCAA 59.560 52.632 5.01 0.00 43.54 4.52
596 599 3.124686 GCCGTTTGTTTGAGGCCA 58.875 55.556 5.01 0.00 43.54 5.36
599 602 1.894756 TCGGGCCGTTTGTTTGAGG 60.895 57.895 27.32 0.00 0.00 3.86
600 603 1.281656 GTCGGGCCGTTTGTTTGAG 59.718 57.895 27.32 0.00 0.00 3.02
601 604 1.030488 TTGTCGGGCCGTTTGTTTGA 61.030 50.000 27.32 0.00 0.00 2.69
602 605 0.179134 TTTGTCGGGCCGTTTGTTTG 60.179 50.000 27.32 0.00 0.00 2.93
603 606 0.531200 TTTTGTCGGGCCGTTTGTTT 59.469 45.000 27.32 0.00 0.00 2.83
604 607 0.747852 ATTTTGTCGGGCCGTTTGTT 59.252 45.000 27.32 5.00 0.00 2.83
605 608 0.031449 CATTTTGTCGGGCCGTTTGT 59.969 50.000 27.32 5.66 0.00 2.83
606 609 0.665972 CCATTTTGTCGGGCCGTTTG 60.666 55.000 27.32 14.30 0.00 2.93
607 610 1.663173 CCATTTTGTCGGGCCGTTT 59.337 52.632 27.32 2.51 0.00 3.60
608 611 2.272447 CCCATTTTGTCGGGCCGTT 61.272 57.895 27.32 2.13 35.09 4.44
609 612 2.675075 CCCATTTTGTCGGGCCGT 60.675 61.111 27.32 1.27 35.09 5.68
610 613 3.448340 CCCCATTTTGTCGGGCCG 61.448 66.667 22.51 22.51 41.57 6.13
611 614 2.283604 ACCCCATTTTGTCGGGCC 60.284 61.111 0.00 0.00 41.57 5.80
612 615 1.304134 AGACCCCATTTTGTCGGGC 60.304 57.895 0.00 0.00 41.57 6.13
613 616 0.965363 CCAGACCCCATTTTGTCGGG 60.965 60.000 0.00 0.00 39.78 5.14
614 617 1.595093 GCCAGACCCCATTTTGTCGG 61.595 60.000 0.00 0.00 36.61 4.79
615 618 1.883021 GCCAGACCCCATTTTGTCG 59.117 57.895 0.00 0.00 36.61 4.35
616 619 0.893727 ACGCCAGACCCCATTTTGTC 60.894 55.000 0.00 0.00 0.00 3.18
617 620 1.152830 ACGCCAGACCCCATTTTGT 59.847 52.632 0.00 0.00 0.00 2.83
618 621 1.586028 CACGCCAGACCCCATTTTG 59.414 57.895 0.00 0.00 0.00 2.44
619 622 1.606313 CCACGCCAGACCCCATTTT 60.606 57.895 0.00 0.00 0.00 1.82
620 623 2.035626 CCACGCCAGACCCCATTT 59.964 61.111 0.00 0.00 0.00 2.32
621 624 2.933287 TCCACGCCAGACCCCATT 60.933 61.111 0.00 0.00 0.00 3.16
622 625 3.402681 CTCCACGCCAGACCCCAT 61.403 66.667 0.00 0.00 0.00 4.00
623 626 3.924013 ATCTCCACGCCAGACCCCA 62.924 63.158 0.00 0.00 0.00 4.96
624 627 3.083997 ATCTCCACGCCAGACCCC 61.084 66.667 0.00 0.00 0.00 4.95
625 628 2.187946 CATCTCCACGCCAGACCC 59.812 66.667 0.00 0.00 0.00 4.46
626 629 2.187946 CCATCTCCACGCCAGACC 59.812 66.667 0.00 0.00 0.00 3.85
627 630 2.512515 GCCATCTCCACGCCAGAC 60.513 66.667 0.00 0.00 0.00 3.51
628 631 3.785859 GGCCATCTCCACGCCAGA 61.786 66.667 0.00 0.00 42.52 3.86
631 634 0.613260 TATATGGCCATCTCCACGCC 59.387 55.000 24.80 0.00 43.32 5.68
632 635 1.001974 TGTATATGGCCATCTCCACGC 59.998 52.381 24.80 7.40 39.25 5.34
633 636 3.401033 TTGTATATGGCCATCTCCACG 57.599 47.619 24.80 0.00 39.25 4.94
634 637 4.910195 TCATTGTATATGGCCATCTCCAC 58.090 43.478 24.80 15.77 39.25 4.02
635 638 5.784398 ATCATTGTATATGGCCATCTCCA 57.216 39.130 24.80 14.13 40.97 3.86
636 639 6.182627 TCAATCATTGTATATGGCCATCTCC 58.817 40.000 24.80 11.46 0.00 3.71
637 640 7.876936 ATCAATCATTGTATATGGCCATCTC 57.123 36.000 24.80 14.16 0.00 2.75
638 641 9.404848 CTTATCAATCATTGTATATGGCCATCT 57.595 33.333 24.80 16.05 0.00 2.90
639 642 9.399797 TCTTATCAATCATTGTATATGGCCATC 57.600 33.333 24.80 8.97 0.00 3.51
640 643 9.931698 ATCTTATCAATCATTGTATATGGCCAT 57.068 29.630 24.45 24.45 0.00 4.40
673 676 9.757227 GTCTAGATTACATGCAAGACTTAAGAT 57.243 33.333 10.09 0.00 32.51 2.40
674 677 8.749354 TGTCTAGATTACATGCAAGACTTAAGA 58.251 33.333 10.09 0.00 35.50 2.10
675 678 8.932945 TGTCTAGATTACATGCAAGACTTAAG 57.067 34.615 11.14 0.00 35.50 1.85
676 679 9.317936 CATGTCTAGATTACATGCAAGACTTAA 57.682 33.333 9.39 0.00 45.43 1.85
677 680 8.877808 CATGTCTAGATTACATGCAAGACTTA 57.122 34.615 9.39 0.00 45.43 2.24
678 681 7.783090 CATGTCTAGATTACATGCAAGACTT 57.217 36.000 9.39 3.72 45.43 3.01
707 710 7.643123 AGATGACCCATTGTAGACCTATTTTT 58.357 34.615 0.00 0.00 0.00 1.94
708 711 7.127955 AGAGATGACCCATTGTAGACCTATTTT 59.872 37.037 0.00 0.00 0.00 1.82
709 712 6.617371 AGAGATGACCCATTGTAGACCTATTT 59.383 38.462 0.00 0.00 0.00 1.40
710 713 6.146760 AGAGATGACCCATTGTAGACCTATT 58.853 40.000 0.00 0.00 0.00 1.73
711 714 5.721225 AGAGATGACCCATTGTAGACCTAT 58.279 41.667 0.00 0.00 0.00 2.57
712 715 5.144159 AGAGATGACCCATTGTAGACCTA 57.856 43.478 0.00 0.00 0.00 3.08
713 716 4.000928 AGAGATGACCCATTGTAGACCT 57.999 45.455 0.00 0.00 0.00 3.85
714 717 4.762289 AAGAGATGACCCATTGTAGACC 57.238 45.455 0.00 0.00 0.00 3.85
715 718 5.293560 GCTAAGAGATGACCCATTGTAGAC 58.706 45.833 0.00 0.00 0.00 2.59
716 719 4.345257 GGCTAAGAGATGACCCATTGTAGA 59.655 45.833 0.00 0.00 0.00 2.59
717 720 4.346418 AGGCTAAGAGATGACCCATTGTAG 59.654 45.833 0.00 0.00 0.00 2.74
718 721 4.298626 AGGCTAAGAGATGACCCATTGTA 58.701 43.478 0.00 0.00 0.00 2.41
719 722 3.118531 AGGCTAAGAGATGACCCATTGT 58.881 45.455 0.00 0.00 0.00 2.71
720 723 3.853355 AGGCTAAGAGATGACCCATTG 57.147 47.619 0.00 0.00 0.00 2.82
721 724 5.848921 AGATAAGGCTAAGAGATGACCCATT 59.151 40.000 0.00 0.00 0.00 3.16
722 725 5.410602 AGATAAGGCTAAGAGATGACCCAT 58.589 41.667 0.00 0.00 0.00 4.00
723 726 4.820775 AGATAAGGCTAAGAGATGACCCA 58.179 43.478 0.00 0.00 0.00 4.51
724 727 5.816955 AAGATAAGGCTAAGAGATGACCC 57.183 43.478 0.00 0.00 0.00 4.46
725 728 6.821388 TCAAAGATAAGGCTAAGAGATGACC 58.179 40.000 0.00 0.00 0.00 4.02
726 729 9.988815 TTATCAAAGATAAGGCTAAGAGATGAC 57.011 33.333 0.00 0.00 0.00 3.06
727 730 9.988815 GTTATCAAAGATAAGGCTAAGAGATGA 57.011 33.333 0.00 0.00 0.00 2.92
728 731 9.995003 AGTTATCAAAGATAAGGCTAAGAGATG 57.005 33.333 0.00 0.00 0.00 2.90
731 734 9.418045 GCTAGTTATCAAAGATAAGGCTAAGAG 57.582 37.037 0.00 0.00 0.00 2.85
732 735 9.148879 AGCTAGTTATCAAAGATAAGGCTAAGA 57.851 33.333 14.39 0.00 0.00 2.10
749 752 9.662947 ACCGTGTTTTTAGAAATAGCTAGTTAT 57.337 29.630 6.39 6.34 0.00 1.89
750 753 8.928733 CACCGTGTTTTTAGAAATAGCTAGTTA 58.071 33.333 6.39 0.00 0.00 2.24
751 754 7.658575 TCACCGTGTTTTTAGAAATAGCTAGTT 59.341 33.333 6.06 6.06 0.00 2.24
752 755 7.156673 TCACCGTGTTTTTAGAAATAGCTAGT 58.843 34.615 0.00 0.00 0.00 2.57
753 756 7.544566 TCTCACCGTGTTTTTAGAAATAGCTAG 59.455 37.037 0.00 0.00 0.00 3.42
754 757 7.330208 GTCTCACCGTGTTTTTAGAAATAGCTA 59.670 37.037 0.00 0.00 0.00 3.32
755 758 6.147328 GTCTCACCGTGTTTTTAGAAATAGCT 59.853 38.462 0.00 0.00 0.00 3.32
756 759 6.073440 TGTCTCACCGTGTTTTTAGAAATAGC 60.073 38.462 0.00 0.00 0.00 2.97
757 760 7.416154 TGTCTCACCGTGTTTTTAGAAATAG 57.584 36.000 0.00 0.00 0.00 1.73
758 761 7.972832 ATGTCTCACCGTGTTTTTAGAAATA 57.027 32.000 0.00 0.00 0.00 1.40
759 762 6.877611 ATGTCTCACCGTGTTTTTAGAAAT 57.122 33.333 0.00 0.00 0.00 2.17
760 763 7.972832 ATATGTCTCACCGTGTTTTTAGAAA 57.027 32.000 0.00 0.00 0.00 2.52
761 764 7.442969 ACAATATGTCTCACCGTGTTTTTAGAA 59.557 33.333 0.00 0.00 0.00 2.10
762 765 6.932400 ACAATATGTCTCACCGTGTTTTTAGA 59.068 34.615 0.00 0.00 0.00 2.10
763 766 7.015289 CACAATATGTCTCACCGTGTTTTTAG 58.985 38.462 0.00 0.00 0.00 1.85
764 767 6.566942 GCACAATATGTCTCACCGTGTTTTTA 60.567 38.462 0.00 0.00 0.00 1.52
765 768 5.757886 CACAATATGTCTCACCGTGTTTTT 58.242 37.500 0.00 0.00 0.00 1.94
766 769 4.320202 GCACAATATGTCTCACCGTGTTTT 60.320 41.667 0.00 0.00 0.00 2.43
767 770 3.188460 GCACAATATGTCTCACCGTGTTT 59.812 43.478 0.00 0.00 0.00 2.83
768 771 2.742053 GCACAATATGTCTCACCGTGTT 59.258 45.455 0.00 0.00 0.00 3.32
769 772 2.028112 AGCACAATATGTCTCACCGTGT 60.028 45.455 0.00 0.00 0.00 4.49
770 773 2.621338 AGCACAATATGTCTCACCGTG 58.379 47.619 0.00 0.00 0.00 4.94
771 774 4.159693 TCTTAGCACAATATGTCTCACCGT 59.840 41.667 0.00 0.00 0.00 4.83
772 775 4.682787 TCTTAGCACAATATGTCTCACCG 58.317 43.478 0.00 0.00 0.00 4.94
773 776 5.907207 TCTCTTAGCACAATATGTCTCACC 58.093 41.667 0.00 0.00 0.00 4.02
774 777 7.205992 TGATCTCTTAGCACAATATGTCTCAC 58.794 38.462 0.00 0.00 0.00 3.51
775 778 7.352079 TGATCTCTTAGCACAATATGTCTCA 57.648 36.000 0.00 0.00 0.00 3.27
776 779 8.306038 AGATGATCTCTTAGCACAATATGTCTC 58.694 37.037 0.00 0.00 0.00 3.36
777 780 8.192743 AGATGATCTCTTAGCACAATATGTCT 57.807 34.615 0.00 0.00 0.00 3.41
778 781 8.830201 AAGATGATCTCTTAGCACAATATGTC 57.170 34.615 0.00 0.00 42.56 3.06
779 782 9.624373 AAAAGATGATCTCTTAGCACAATATGT 57.376 29.630 0.00 0.00 43.60 2.29
780 783 9.880064 CAAAAGATGATCTCTTAGCACAATATG 57.120 33.333 0.00 0.00 43.60 1.78
781 784 9.624373 ACAAAAGATGATCTCTTAGCACAATAT 57.376 29.630 0.00 0.00 43.60 1.28
783 786 7.934855 ACAAAAGATGATCTCTTAGCACAAT 57.065 32.000 0.00 0.00 43.60 2.71
784 787 7.877612 TGTACAAAAGATGATCTCTTAGCACAA 59.122 33.333 0.00 0.00 43.60 3.33
785 788 7.331934 GTGTACAAAAGATGATCTCTTAGCACA 59.668 37.037 0.00 7.82 43.60 4.57
786 789 7.201565 GGTGTACAAAAGATGATCTCTTAGCAC 60.202 40.741 0.00 2.00 43.60 4.40
787 790 6.818644 GGTGTACAAAAGATGATCTCTTAGCA 59.181 38.462 0.00 0.00 43.60 3.49
788 791 7.044798 AGGTGTACAAAAGATGATCTCTTAGC 58.955 38.462 0.00 2.80 43.60 3.09
791 794 9.965902 AAATAGGTGTACAAAAGATGATCTCTT 57.034 29.630 0.00 0.00 46.44 2.85
804 807 8.761689 CCCTAAGGTAAGTAAATAGGTGTACAA 58.238 37.037 0.00 0.00 32.89 2.41
805 808 8.310122 CCCTAAGGTAAGTAAATAGGTGTACA 57.690 38.462 0.00 0.00 32.89 2.90
855 858 2.094854 GGAGAAAGTTTACTCTCGGCGA 60.095 50.000 10.14 10.14 39.23 5.54
1150 1158 8.902540 TTATCTATATGGACTTTTGCAATCGT 57.097 30.769 0.00 0.00 0.00 3.73
1169 1177 5.012148 GCAGATGGACTAAAGCCCTTATCTA 59.988 44.000 0.00 0.00 0.00 1.98
1179 1187 5.104259 AGTAAAGGGCAGATGGACTAAAG 57.896 43.478 0.00 0.00 0.00 1.85
1304 1312 2.440065 GCCCCATGTTCATCGCCA 60.440 61.111 0.00 0.00 0.00 5.69
1322 1330 1.480212 ATGGTCACGGAAGAGCCACA 61.480 55.000 0.00 0.00 35.23 4.17
1392 1400 3.831911 CCCATACCACAATTTTGTCCAGT 59.168 43.478 0.00 0.00 39.91 4.00
1404 1412 3.010027 TCAAGATTCTTGCCCATACCACA 59.990 43.478 19.53 0.00 0.00 4.17
1484 1492 8.700973 GGGTAGTTTGAATCTCTAAGATCTTCT 58.299 37.037 12.24 0.75 32.89 2.85
1543 1551 6.114187 TGTGACATTAAGTTCCACTCTGAT 57.886 37.500 0.00 0.00 0.00 2.90
1680 1690 1.541147 CCCGTACCACACTCTTCGTAA 59.459 52.381 0.00 0.00 0.00 3.18
1783 1793 2.168728 GTCCTCTTCCTGTATTTCGCCT 59.831 50.000 0.00 0.00 0.00 5.52
1785 1795 3.247006 TGTCCTCTTCCTGTATTTCGC 57.753 47.619 0.00 0.00 0.00 4.70
1805 1815 0.980423 GTCTCTTCCAGCCTCACCTT 59.020 55.000 0.00 0.00 0.00 3.50
1812 1822 0.390472 CTTCACCGTCTCTTCCAGCC 60.390 60.000 0.00 0.00 0.00 4.85
1997 2009 1.240256 TGGTCGTGCCAACATTTACC 58.760 50.000 0.00 0.00 45.94 2.85
2050 2063 1.411977 CCAGAGAATCAGATGCCGAGT 59.588 52.381 0.00 0.00 37.82 4.18
2106 2119 3.400054 CTTCCCTCCCACCGGGAC 61.400 72.222 6.32 0.00 46.17 4.46
2121 2134 2.359478 CGCCTTTGGTACGGCCTT 60.359 61.111 0.00 0.00 43.38 4.35
2260 2273 2.483106 CCATCAGACTTGTCAACTGCAG 59.517 50.000 13.48 13.48 0.00 4.41
2636 2689 4.352893 TCTCCATACATTCCTGTCAGACA 58.647 43.478 2.48 2.48 36.79 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.