Multiple sequence alignment - TraesCS2B01G373600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G373600 | chr2B | 100.000 | 7547 | 0 | 0 | 1 | 7547 | 532097596 | 532090050 | 0.000000e+00 | 13937.0 |
1 | TraesCS2B01G373600 | chr2B | 98.551 | 69 | 1 | 0 | 2106 | 2174 | 532095427 | 532095359 | 1.030000e-23 | 122.0 |
2 | TraesCS2B01G373600 | chr2B | 98.551 | 69 | 1 | 0 | 2170 | 2238 | 532095491 | 532095423 | 1.030000e-23 | 122.0 |
3 | TraesCS2B01G373600 | chr2D | 96.024 | 5257 | 102 | 26 | 2170 | 7344 | 451975921 | 451970690 | 0.000000e+00 | 8451.0 |
4 | TraesCS2B01G373600 | chr2D | 94.300 | 1614 | 64 | 9 | 588 | 2175 | 451977462 | 451975851 | 0.000000e+00 | 2446.0 |
5 | TraesCS2B01G373600 | chr2D | 93.224 | 428 | 20 | 6 | 145 | 569 | 451977869 | 451977448 | 8.320000e-174 | 621.0 |
6 | TraesCS2B01G373600 | chr2D | 90.909 | 110 | 7 | 3 | 53 | 160 | 384255280 | 384255172 | 2.190000e-30 | 145.0 |
7 | TraesCS2B01G373600 | chr2D | 94.048 | 84 | 5 | 0 | 3692 | 3775 | 642198794 | 642198711 | 2.210000e-25 | 128.0 |
8 | TraesCS2B01G373600 | chr2D | 95.312 | 64 | 1 | 1 | 4 | 67 | 451977925 | 451977864 | 4.820000e-17 | 100.0 |
9 | TraesCS2B01G373600 | chr2A | 94.933 | 3355 | 93 | 27 | 3768 | 7072 | 597501535 | 597504862 | 0.000000e+00 | 5182.0 |
10 | TraesCS2B01G373600 | chr2A | 92.507 | 1508 | 74 | 15 | 588 | 2059 | 597498349 | 597499853 | 0.000000e+00 | 2122.0 |
11 | TraesCS2B01G373600 | chr2A | 92.894 | 957 | 33 | 21 | 2763 | 3715 | 597500614 | 597501539 | 0.000000e+00 | 1358.0 |
12 | TraesCS2B01G373600 | chr2A | 93.957 | 513 | 25 | 4 | 2170 | 2679 | 597500101 | 597500610 | 0.000000e+00 | 771.0 |
13 | TraesCS2B01G373600 | chr2A | 93.675 | 332 | 15 | 3 | 145 | 473 | 597497901 | 597498229 | 6.800000e-135 | 492.0 |
14 | TraesCS2B01G373600 | chr2A | 94.262 | 122 | 5 | 2 | 2055 | 2174 | 597500049 | 597500170 | 1.290000e-42 | 185.0 |
15 | TraesCS2B01G373600 | chr2A | 93.846 | 65 | 3 | 1 | 1 | 65 | 597497841 | 597497904 | 6.230000e-16 | 97.1 |
16 | TraesCS2B01G373600 | chr3D | 97.101 | 207 | 6 | 0 | 7341 | 7547 | 354090355 | 354090149 | 4.330000e-92 | 350.0 |
17 | TraesCS2B01G373600 | chr6A | 100.000 | 87 | 0 | 0 | 62 | 148 | 562819477 | 562819391 | 2.180000e-35 | 161.0 |
18 | TraesCS2B01G373600 | chr4A | 96.907 | 97 | 2 | 1 | 60 | 156 | 553449522 | 553449427 | 2.180000e-35 | 161.0 |
19 | TraesCS2B01G373600 | chr6D | 95.789 | 95 | 3 | 1 | 55 | 149 | 63731601 | 63731508 | 1.310000e-32 | 152.0 |
20 | TraesCS2B01G373600 | chr7B | 94.000 | 100 | 5 | 1 | 62 | 160 | 652932535 | 652932436 | 4.720000e-32 | 150.0 |
21 | TraesCS2B01G373600 | chr5B | 94.000 | 100 | 5 | 1 | 61 | 160 | 496138767 | 496138669 | 4.720000e-32 | 150.0 |
22 | TraesCS2B01G373600 | chr1D | 94.845 | 97 | 3 | 2 | 61 | 157 | 197821567 | 197821661 | 4.720000e-32 | 150.0 |
23 | TraesCS2B01G373600 | chr4D | 90.179 | 112 | 9 | 2 | 47 | 157 | 119412798 | 119412688 | 2.190000e-30 | 145.0 |
24 | TraesCS2B01G373600 | chr4D | 93.407 | 91 | 3 | 3 | 3694 | 3782 | 215459629 | 215459540 | 1.710000e-26 | 132.0 |
25 | TraesCS2B01G373600 | chr4B | 86.923 | 130 | 13 | 3 | 18 | 147 | 403270654 | 403270779 | 7.890000e-30 | 143.0 |
26 | TraesCS2B01G373600 | chr4B | 95.238 | 84 | 2 | 2 | 3694 | 3776 | 237272800 | 237272718 | 1.710000e-26 | 132.0 |
27 | TraesCS2B01G373600 | chr4B | 92.308 | 91 | 4 | 3 | 3694 | 3782 | 237038972 | 237038883 | 7.950000e-25 | 126.0 |
28 | TraesCS2B01G373600 | chr7D | 96.341 | 82 | 3 | 0 | 3694 | 3775 | 135026247 | 135026328 | 1.320000e-27 | 135.0 |
29 | TraesCS2B01G373600 | chr7A | 94.118 | 85 | 4 | 1 | 3691 | 3775 | 350571789 | 350571872 | 2.210000e-25 | 128.0 |
30 | TraesCS2B01G373600 | chr1A | 95.122 | 82 | 2 | 1 | 3694 | 3775 | 225509495 | 225509574 | 2.210000e-25 | 128.0 |
31 | TraesCS2B01G373600 | chr1A | 92.135 | 89 | 5 | 2 | 3689 | 3776 | 530212687 | 530212600 | 2.860000e-24 | 124.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G373600 | chr2B | 532090050 | 532097596 | 7546 | True | 4727.000000 | 13937 | 99.034000 | 1 | 7547 | 3 | chr2B.!!$R1 | 7546 |
1 | TraesCS2B01G373600 | chr2D | 451970690 | 451977925 | 7235 | True | 2904.500000 | 8451 | 94.715000 | 4 | 7344 | 4 | chr2D.!!$R3 | 7340 |
2 | TraesCS2B01G373600 | chr2A | 597497841 | 597504862 | 7021 | False | 1458.157143 | 5182 | 93.724857 | 1 | 7072 | 7 | chr2A.!!$F1 | 7071 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
640 | 683 | 0.107654 | GCAGCCGTAAATCCTCCAGT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 | F |
1422 | 1484 | 0.519961 | GTTTAGGTGCGTGCGGATTT | 59.480 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 | F |
1524 | 1594 | 0.392729 | AGCTGTCATGGCTGAGCTTC | 60.393 | 55.000 | 8.55 | 0.00 | 38.73 | 3.86 | F |
2875 | 3164 | 0.254178 | ATCAGAGCTGGGTTCGCAAT | 59.746 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 | F |
3325 | 3614 | 2.094182 | TGAGGCATCAGTCGTTTACTCC | 60.094 | 50.000 | 0.00 | 0.00 | 35.76 | 3.85 | F |
4344 | 4650 | 0.661020 | AGGCTGTTTTTGAACCGACG | 59.339 | 50.000 | 0.00 | 0.00 | 0.00 | 5.12 | F |
4362 | 4668 | 1.476891 | ACGTTCTGTCCGATGTATGCT | 59.523 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 | F |
5655 | 5994 | 2.147387 | AGTGAACCGGCCAGGAACT | 61.147 | 57.895 | 18.74 | 14.77 | 45.00 | 3.01 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1524 | 1594 | 0.179000 | GCCCACCTCATCCTACACAG | 59.821 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 | R |
2350 | 2639 | 1.630369 | TCCACCTCTGTTTCATGGGAG | 59.370 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 | R |
3446 | 3735 | 0.179127 | ATGGAGTCGCGTCACATCAG | 60.179 | 55.000 | 5.77 | 0.00 | 0.00 | 2.90 | R |
4022 | 4326 | 2.136298 | TGCCACTTCAACAGGAACAA | 57.864 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 | R |
4657 | 4963 | 2.835580 | TGTACCGTCGATTTCCCAAA | 57.164 | 45.000 | 0.00 | 0.00 | 0.00 | 3.28 | R |
5655 | 5994 | 0.030195 | TCCCAGGCATCATACCTCCA | 60.030 | 55.000 | 0.00 | 0.00 | 34.42 | 3.86 | R |
5772 | 6111 | 0.464735 | TCAACGGACCCTGGTTGTTG | 60.465 | 55.000 | 20.57 | 20.57 | 43.04 | 3.33 | R |
7483 | 7868 | 0.035036 | GGCGGCCTAGAGGATTAACC | 59.965 | 60.000 | 12.87 | 0.00 | 37.39 | 2.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
41 | 43 | 5.850557 | TCAAAGTGAATCTCAAGGCAAAA | 57.149 | 34.783 | 0.00 | 0.00 | 0.00 | 2.44 |
42 | 44 | 6.219417 | TCAAAGTGAATCTCAAGGCAAAAA | 57.781 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
45 | 47 | 5.192327 | AGTGAATCTCAAGGCAAAAACTG | 57.808 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
61 | 63 | 5.582689 | AAAACTGAGTTGCAAAAGTAGCT | 57.417 | 34.783 | 0.00 | 0.00 | 0.00 | 3.32 |
62 | 64 | 6.693315 | AAAACTGAGTTGCAAAAGTAGCTA | 57.307 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
63 | 65 | 5.674933 | AACTGAGTTGCAAAAGTAGCTAC | 57.325 | 39.130 | 16.43 | 16.43 | 37.87 | 3.58 |
67 | 69 | 3.676093 | AGTTGCAAAAGTAGCTACTCCC | 58.324 | 45.455 | 26.21 | 14.59 | 42.81 | 4.30 |
68 | 70 | 3.328050 | AGTTGCAAAAGTAGCTACTCCCT | 59.672 | 43.478 | 26.21 | 8.82 | 42.81 | 4.20 |
69 | 71 | 3.611766 | TGCAAAAGTAGCTACTCCCTC | 57.388 | 47.619 | 26.21 | 15.78 | 34.99 | 4.30 |
70 | 72 | 2.236395 | TGCAAAAGTAGCTACTCCCTCC | 59.764 | 50.000 | 26.21 | 13.95 | 34.99 | 4.30 |
71 | 73 | 2.738964 | GCAAAAGTAGCTACTCCCTCCG | 60.739 | 54.545 | 26.21 | 12.70 | 34.99 | 4.63 |
72 | 74 | 2.496470 | CAAAAGTAGCTACTCCCTCCGT | 59.504 | 50.000 | 26.21 | 6.52 | 34.99 | 4.69 |
73 | 75 | 3.659183 | AAAGTAGCTACTCCCTCCGTA | 57.341 | 47.619 | 26.21 | 0.00 | 34.99 | 4.02 |
74 | 76 | 3.659183 | AAGTAGCTACTCCCTCCGTAA | 57.341 | 47.619 | 26.21 | 0.00 | 34.99 | 3.18 |
75 | 77 | 3.880168 | AGTAGCTACTCCCTCCGTAAT | 57.120 | 47.619 | 20.95 | 0.00 | 0.00 | 1.89 |
76 | 78 | 3.753815 | AGTAGCTACTCCCTCCGTAATC | 58.246 | 50.000 | 20.95 | 0.00 | 0.00 | 1.75 |
77 | 79 | 3.395273 | AGTAGCTACTCCCTCCGTAATCT | 59.605 | 47.826 | 20.95 | 0.00 | 0.00 | 2.40 |
78 | 80 | 4.596643 | AGTAGCTACTCCCTCCGTAATCTA | 59.403 | 45.833 | 20.95 | 0.00 | 0.00 | 1.98 |
79 | 81 | 4.450305 | AGCTACTCCCTCCGTAATCTAA | 57.550 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
80 | 82 | 5.000570 | AGCTACTCCCTCCGTAATCTAAT | 57.999 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
81 | 83 | 6.137104 | AGCTACTCCCTCCGTAATCTAATA | 57.863 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
82 | 84 | 6.733509 | AGCTACTCCCTCCGTAATCTAATAT | 58.266 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
83 | 85 | 7.870027 | AGCTACTCCCTCCGTAATCTAATATA | 58.130 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
84 | 86 | 8.334734 | AGCTACTCCCTCCGTAATCTAATATAA | 58.665 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
85 | 87 | 8.623030 | GCTACTCCCTCCGTAATCTAATATAAG | 58.377 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
86 | 88 | 9.902684 | CTACTCCCTCCGTAATCTAATATAAGA | 57.097 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
87 | 89 | 8.810990 | ACTCCCTCCGTAATCTAATATAAGAG | 57.189 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
88 | 90 | 7.339976 | ACTCCCTCCGTAATCTAATATAAGAGC | 59.660 | 40.741 | 0.00 | 0.00 | 0.00 | 4.09 |
89 | 91 | 6.318144 | TCCCTCCGTAATCTAATATAAGAGCG | 59.682 | 42.308 | 0.00 | 0.00 | 0.00 | 5.03 |
90 | 92 | 6.095160 | CCCTCCGTAATCTAATATAAGAGCGT | 59.905 | 42.308 | 0.00 | 0.00 | 0.00 | 5.07 |
91 | 93 | 7.362747 | CCCTCCGTAATCTAATATAAGAGCGTT | 60.363 | 40.741 | 0.00 | 0.00 | 0.00 | 4.84 |
92 | 94 | 8.027771 | CCTCCGTAATCTAATATAAGAGCGTTT | 58.972 | 37.037 | 0.00 | 0.00 | 0.00 | 3.60 |
109 | 111 | 9.570488 | AAGAGCGTTTAGATTACTAAAGTAGTG | 57.430 | 33.333 | 0.00 | 0.00 | 45.42 | 2.74 |
110 | 112 | 8.738106 | AGAGCGTTTAGATTACTAAAGTAGTGT | 58.262 | 33.333 | 0.00 | 0.00 | 45.42 | 3.55 |
111 | 113 | 9.351570 | GAGCGTTTAGATTACTAAAGTAGTGTT | 57.648 | 33.333 | 0.00 | 0.00 | 45.42 | 3.32 |
112 | 114 | 9.351570 | AGCGTTTAGATTACTAAAGTAGTGTTC | 57.648 | 33.333 | 0.00 | 0.00 | 45.42 | 3.18 |
113 | 115 | 9.351570 | GCGTTTAGATTACTAAAGTAGTGTTCT | 57.648 | 33.333 | 0.00 | 3.55 | 45.42 | 3.01 |
119 | 121 | 9.351570 | AGATTACTAAAGTAGTGTTCTAAACGC | 57.648 | 33.333 | 0.00 | 0.00 | 39.81 | 4.84 |
140 | 142 | 9.530633 | AAACGCTCTTATATTAGTTTACAGAGG | 57.469 | 33.333 | 0.00 | 0.00 | 31.14 | 3.69 |
141 | 143 | 7.659186 | ACGCTCTTATATTAGTTTACAGAGGG | 58.341 | 38.462 | 8.36 | 8.36 | 42.53 | 4.30 |
142 | 144 | 7.504911 | ACGCTCTTATATTAGTTTACAGAGGGA | 59.495 | 37.037 | 14.96 | 0.00 | 40.49 | 4.20 |
143 | 145 | 8.024285 | CGCTCTTATATTAGTTTACAGAGGGAG | 58.976 | 40.741 | 4.76 | 0.00 | 40.49 | 4.30 |
297 | 300 | 8.099364 | ACGAGACACATATGTTCATTTTCTTT | 57.901 | 30.769 | 5.37 | 0.00 | 39.95 | 2.52 |
331 | 334 | 8.812147 | TTCGTGTATGATCTAATAACATGGTC | 57.188 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
352 | 355 | 5.692204 | GGTCTATTAACCTGACATGTCATCG | 59.308 | 44.000 | 28.00 | 21.89 | 39.13 | 3.84 |
427 | 430 | 5.632764 | CGTTGCATCCAATTTTGTAATGACA | 59.367 | 36.000 | 0.00 | 0.00 | 32.75 | 3.58 |
522 | 564 | 0.889186 | ACCCGTCCAAAGTCACATGC | 60.889 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
548 | 590 | 0.391130 | TGTCCATTACAGCCTGCGAC | 60.391 | 55.000 | 0.00 | 0.00 | 33.01 | 5.19 |
572 | 614 | 2.320367 | CGAGATAGCATCGCACTTACC | 58.680 | 52.381 | 0.00 | 0.00 | 32.81 | 2.85 |
573 | 615 | 2.287608 | CGAGATAGCATCGCACTTACCA | 60.288 | 50.000 | 0.00 | 0.00 | 32.81 | 3.25 |
574 | 616 | 3.612717 | CGAGATAGCATCGCACTTACCAT | 60.613 | 47.826 | 0.00 | 0.00 | 32.81 | 3.55 |
575 | 617 | 3.657634 | AGATAGCATCGCACTTACCATG | 58.342 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
576 | 618 | 1.581934 | TAGCATCGCACTTACCATGC | 58.418 | 50.000 | 0.00 | 0.00 | 41.72 | 4.06 |
577 | 619 | 0.392863 | AGCATCGCACTTACCATGCA | 60.393 | 50.000 | 5.60 | 0.00 | 43.48 | 3.96 |
578 | 620 | 0.451383 | GCATCGCACTTACCATGCAA | 59.549 | 50.000 | 0.00 | 0.00 | 43.57 | 4.08 |
579 | 621 | 1.135431 | GCATCGCACTTACCATGCAAA | 60.135 | 47.619 | 0.00 | 0.00 | 43.57 | 3.68 |
580 | 622 | 2.670789 | GCATCGCACTTACCATGCAAAA | 60.671 | 45.455 | 0.00 | 0.00 | 43.57 | 2.44 |
581 | 623 | 3.573598 | CATCGCACTTACCATGCAAAAA | 58.426 | 40.909 | 0.00 | 0.00 | 43.57 | 1.94 |
614 | 656 | 4.767255 | GCACTCCAGCAGGACCCG | 62.767 | 72.222 | 0.00 | 0.00 | 39.61 | 5.28 |
640 | 683 | 0.107654 | GCAGCCGTAAATCCTCCAGT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
656 | 699 | 0.895559 | CAGTCTCCCCTGCCCAAAAC | 60.896 | 60.000 | 0.00 | 0.00 | 0.00 | 2.43 |
665 | 708 | 2.081462 | CCTGCCCAAAACCGTAACTAG | 58.919 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
732 | 776 | 3.680786 | CGACTCCACGCACCTCCA | 61.681 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
748 | 792 | 3.133362 | ACCTCCACTTGTGAAAGTACGAA | 59.867 | 43.478 | 1.89 | 0.00 | 0.00 | 3.85 |
781 | 825 | 1.576421 | GCAGCAGAAACAACGAGGG | 59.424 | 57.895 | 0.00 | 0.00 | 0.00 | 4.30 |
786 | 830 | 1.864029 | GCAGAAACAACGAGGGTTTGC | 60.864 | 52.381 | 8.17 | 4.72 | 38.50 | 3.68 |
883 | 927 | 2.861974 | GGAACCCAACCCTCCCCA | 60.862 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
1284 | 1338 | 4.906792 | GCTCTAGGCCCTGCGCTG | 62.907 | 72.222 | 9.73 | 8.47 | 37.74 | 5.18 |
1422 | 1484 | 0.519961 | GTTTAGGTGCGTGCGGATTT | 59.480 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
1460 | 1522 | 8.718102 | TCTGTAGGCTACAATTTAGATTTCAC | 57.282 | 34.615 | 26.12 | 0.00 | 38.38 | 3.18 |
1497 | 1567 | 2.601666 | AGGGCTGTGCTCTCGACA | 60.602 | 61.111 | 0.00 | 0.00 | 31.40 | 4.35 |
1524 | 1594 | 0.392729 | AGCTGTCATGGCTGAGCTTC | 60.393 | 55.000 | 8.55 | 0.00 | 38.73 | 3.86 |
1587 | 1657 | 4.018506 | TCAAGCAGATTCCTGGGTTTATCA | 60.019 | 41.667 | 0.00 | 0.00 | 40.72 | 2.15 |
1596 | 1666 | 3.585289 | TCCTGGGTTTATCACTACTTGCA | 59.415 | 43.478 | 0.00 | 0.00 | 0.00 | 4.08 |
1603 | 1673 | 8.268605 | TGGGTTTATCACTACTTGCACATATAA | 58.731 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
1610 | 1680 | 9.830975 | ATCACTACTTGCACATATAACATGTTA | 57.169 | 29.630 | 20.14 | 20.14 | 0.00 | 2.41 |
1685 | 1764 | 9.294030 | CAGATTTTGGCTATGTTCTGATTTAAC | 57.706 | 33.333 | 0.00 | 0.00 | 34.00 | 2.01 |
1725 | 1804 | 3.572632 | ATGCTGACATGGATGCTACTT | 57.427 | 42.857 | 0.00 | 0.00 | 34.35 | 2.24 |
1755 | 1834 | 3.490439 | TTGGTGACTTGCATTCTGAGA | 57.510 | 42.857 | 0.00 | 0.00 | 0.00 | 3.27 |
1813 | 1892 | 3.813596 | CCTGCGCAAGGTACATCC | 58.186 | 61.111 | 13.05 | 0.00 | 41.74 | 3.51 |
1817 | 1896 | 1.819632 | GCGCAAGGTACATCCCTGG | 60.820 | 63.158 | 0.30 | 0.00 | 34.19 | 4.45 |
1828 | 1907 | 1.003355 | ATCCCTGGCACTTCACACG | 60.003 | 57.895 | 0.00 | 0.00 | 0.00 | 4.49 |
1952 | 2031 | 3.139077 | GTGGTTCGACAGGTTTGAGATT | 58.861 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
1957 | 2036 | 5.642063 | GGTTCGACAGGTTTGAGATTTATCA | 59.358 | 40.000 | 0.00 | 0.00 | 0.00 | 2.15 |
1959 | 2038 | 5.419542 | TCGACAGGTTTGAGATTTATCAGG | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1979 | 2058 | 7.020827 | TCAGGGAAGAACTATCAAGTTTGAT | 57.979 | 36.000 | 11.69 | 11.69 | 46.09 | 2.57 |
2074 | 2357 | 4.572389 | CCACTTAGTTCACTGATGTATGCC | 59.428 | 45.833 | 0.00 | 0.00 | 0.00 | 4.40 |
2075 | 2358 | 5.178061 | CACTTAGTTCACTGATGTATGCCA | 58.822 | 41.667 | 0.00 | 0.00 | 0.00 | 4.92 |
2081 | 2364 | 2.092267 | TCACTGATGTATGCCATTGCCT | 60.092 | 45.455 | 0.00 | 0.00 | 36.33 | 4.75 |
2083 | 2366 | 2.092267 | ACTGATGTATGCCATTGCCTGA | 60.092 | 45.455 | 0.00 | 0.00 | 36.33 | 3.86 |
2140 | 2425 | 4.974368 | AGATTGTCAGTAGAAGACTCCG | 57.026 | 45.455 | 0.00 | 0.00 | 35.64 | 4.63 |
2141 | 2426 | 4.337145 | AGATTGTCAGTAGAAGACTCCGT | 58.663 | 43.478 | 0.00 | 0.00 | 35.64 | 4.69 |
2142 | 2427 | 4.767928 | AGATTGTCAGTAGAAGACTCCGTT | 59.232 | 41.667 | 0.00 | 0.00 | 35.64 | 4.44 |
2143 | 2428 | 4.931661 | TTGTCAGTAGAAGACTCCGTTT | 57.068 | 40.909 | 0.00 | 0.00 | 35.64 | 3.60 |
2144 | 2429 | 4.931661 | TGTCAGTAGAAGACTCCGTTTT | 57.068 | 40.909 | 0.00 | 0.00 | 35.64 | 2.43 |
2145 | 2430 | 4.617959 | TGTCAGTAGAAGACTCCGTTTTG | 58.382 | 43.478 | 0.00 | 0.00 | 35.64 | 2.44 |
2146 | 2431 | 4.098960 | TGTCAGTAGAAGACTCCGTTTTGT | 59.901 | 41.667 | 0.00 | 0.00 | 35.64 | 2.83 |
2147 | 2432 | 5.300034 | TGTCAGTAGAAGACTCCGTTTTGTA | 59.700 | 40.000 | 0.00 | 0.00 | 35.64 | 2.41 |
2148 | 2433 | 6.015688 | TGTCAGTAGAAGACTCCGTTTTGTAT | 60.016 | 38.462 | 0.00 | 0.00 | 35.64 | 2.29 |
2149 | 2434 | 6.308282 | GTCAGTAGAAGACTCCGTTTTGTATG | 59.692 | 42.308 | 0.00 | 0.00 | 35.64 | 2.39 |
2150 | 2435 | 6.015688 | TCAGTAGAAGACTCCGTTTTGTATGT | 60.016 | 38.462 | 0.00 | 0.00 | 35.64 | 2.29 |
2151 | 2436 | 6.645415 | CAGTAGAAGACTCCGTTTTGTATGTT | 59.355 | 38.462 | 0.00 | 0.00 | 35.64 | 2.71 |
2152 | 2437 | 7.170998 | CAGTAGAAGACTCCGTTTTGTATGTTT | 59.829 | 37.037 | 0.00 | 0.00 | 35.64 | 2.83 |
2153 | 2438 | 6.300354 | AGAAGACTCCGTTTTGTATGTTTG | 57.700 | 37.500 | 0.00 | 0.00 | 0.00 | 2.93 |
2154 | 2439 | 6.053005 | AGAAGACTCCGTTTTGTATGTTTGA | 58.947 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2155 | 2440 | 6.540914 | AGAAGACTCCGTTTTGTATGTTTGAA | 59.459 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
2156 | 2441 | 6.877611 | AGACTCCGTTTTGTATGTTTGAAT | 57.122 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2157 | 2442 | 6.668323 | AGACTCCGTTTTGTATGTTTGAATG | 58.332 | 36.000 | 0.00 | 0.00 | 0.00 | 2.67 |
2158 | 2443 | 6.262273 | AGACTCCGTTTTGTATGTTTGAATGT | 59.738 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
2159 | 2444 | 6.205784 | ACTCCGTTTTGTATGTTTGAATGTG | 58.794 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2160 | 2445 | 6.137794 | TCCGTTTTGTATGTTTGAATGTGT | 57.862 | 33.333 | 0.00 | 0.00 | 0.00 | 3.72 |
2161 | 2446 | 5.974158 | TCCGTTTTGTATGTTTGAATGTGTG | 59.026 | 36.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2162 | 2447 | 5.746245 | CCGTTTTGTATGTTTGAATGTGTGT | 59.254 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2163 | 2448 | 6.291532 | CCGTTTTGTATGTTTGAATGTGTGTG | 60.292 | 38.462 | 0.00 | 0.00 | 0.00 | 3.82 |
2164 | 2449 | 6.410038 | GTTTTGTATGTTTGAATGTGTGTGC | 58.590 | 36.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2165 | 2450 | 5.512753 | TTGTATGTTTGAATGTGTGTGCT | 57.487 | 34.783 | 0.00 | 0.00 | 0.00 | 4.40 |
2166 | 2451 | 4.857799 | TGTATGTTTGAATGTGTGTGCTG | 58.142 | 39.130 | 0.00 | 0.00 | 0.00 | 4.41 |
2167 | 2452 | 2.867287 | TGTTTGAATGTGTGTGCTGG | 57.133 | 45.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2168 | 2453 | 2.098614 | TGTTTGAATGTGTGTGCTGGT | 58.901 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
2169 | 2454 | 3.282885 | TGTTTGAATGTGTGTGCTGGTA | 58.717 | 40.909 | 0.00 | 0.00 | 0.00 | 3.25 |
2170 | 2455 | 3.888323 | TGTTTGAATGTGTGTGCTGGTAT | 59.112 | 39.130 | 0.00 | 0.00 | 0.00 | 2.73 |
2171 | 2456 | 5.066593 | TGTTTGAATGTGTGTGCTGGTATA | 58.933 | 37.500 | 0.00 | 0.00 | 0.00 | 1.47 |
2172 | 2457 | 5.709631 | TGTTTGAATGTGTGTGCTGGTATAT | 59.290 | 36.000 | 0.00 | 0.00 | 0.00 | 0.86 |
2173 | 2458 | 6.208402 | TGTTTGAATGTGTGTGCTGGTATATT | 59.792 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
2174 | 2459 | 5.816449 | TGAATGTGTGTGCTGGTATATTG | 57.184 | 39.130 | 0.00 | 0.00 | 0.00 | 1.90 |
2175 | 2460 | 5.495640 | TGAATGTGTGTGCTGGTATATTGA | 58.504 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2176 | 2461 | 5.942826 | TGAATGTGTGTGCTGGTATATTGAA | 59.057 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2177 | 2462 | 6.602803 | TGAATGTGTGTGCTGGTATATTGAAT | 59.397 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2178 | 2463 | 7.122501 | TGAATGTGTGTGCTGGTATATTGAATT | 59.877 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2179 | 2464 | 6.193514 | TGTGTGTGCTGGTATATTGAATTG | 57.806 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
2180 | 2465 | 5.709631 | TGTGTGTGCTGGTATATTGAATTGT | 59.290 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2181 | 2466 | 6.029607 | GTGTGTGCTGGTATATTGAATTGTG | 58.970 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2182 | 2467 | 5.709631 | TGTGTGCTGGTATATTGAATTGTGT | 59.290 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2183 | 2468 | 6.881602 | TGTGTGCTGGTATATTGAATTGTGTA | 59.118 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
2184 | 2469 | 7.065683 | TGTGTGCTGGTATATTGAATTGTGTAG | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
2185 | 2470 | 7.279981 | GTGTGCTGGTATATTGAATTGTGTAGA | 59.720 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
2186 | 2471 | 7.992608 | TGTGCTGGTATATTGAATTGTGTAGAT | 59.007 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
2187 | 2472 | 8.840321 | GTGCTGGTATATTGAATTGTGTAGATT | 58.160 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2188 | 2473 | 8.839343 | TGCTGGTATATTGAATTGTGTAGATTG | 58.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
2189 | 2474 | 8.840321 | GCTGGTATATTGAATTGTGTAGATTGT | 58.160 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
2191 | 2476 | 9.898152 | TGGTATATTGAATTGTGTAGATTGTCA | 57.102 | 29.630 | 0.00 | 0.00 | 0.00 | 3.58 |
2197 | 2482 | 9.725019 | ATTGAATTGTGTAGATTGTCAGTAGAA | 57.275 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
2198 | 2483 | 8.763049 | TGAATTGTGTAGATTGTCAGTAGAAG | 57.237 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
2199 | 2484 | 8.585018 | TGAATTGTGTAGATTGTCAGTAGAAGA | 58.415 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
2200 | 2485 | 8.764524 | AATTGTGTAGATTGTCAGTAGAAGAC | 57.235 | 34.615 | 0.00 | 0.00 | 36.55 | 3.01 |
2201 | 2486 | 7.526142 | TTGTGTAGATTGTCAGTAGAAGACT | 57.474 | 36.000 | 0.00 | 0.00 | 39.82 | 3.24 |
2202 | 2487 | 7.147143 | TGTGTAGATTGTCAGTAGAAGACTC | 57.853 | 40.000 | 0.00 | 0.00 | 35.64 | 3.36 |
2203 | 2488 | 6.151312 | TGTGTAGATTGTCAGTAGAAGACTCC | 59.849 | 42.308 | 0.00 | 0.00 | 35.64 | 3.85 |
2256 | 2541 | 8.322091 | GGTATATTAGTGGAAATAGGCTGTCAT | 58.678 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
2350 | 2639 | 6.042208 | AGGATGGAAGTAAATACTAGAGGCAC | 59.958 | 42.308 | 0.00 | 0.00 | 34.99 | 5.01 |
2423 | 2712 | 3.549471 | CAGAATACTCTGTAGCGTGCTTG | 59.451 | 47.826 | 0.00 | 0.00 | 43.64 | 4.01 |
2875 | 3164 | 0.254178 | ATCAGAGCTGGGTTCGCAAT | 59.746 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
3307 | 3596 | 3.450457 | AGCTCAGGTACCTTCAAGATGAG | 59.550 | 47.826 | 13.15 | 15.49 | 0.00 | 2.90 |
3325 | 3614 | 2.094182 | TGAGGCATCAGTCGTTTACTCC | 60.094 | 50.000 | 0.00 | 0.00 | 35.76 | 3.85 |
3442 | 3731 | 4.775664 | TGCTGATTTGCATCGATTAATCG | 58.224 | 39.130 | 27.99 | 27.99 | 43.64 | 3.34 |
3528 | 3817 | 6.716284 | TGTCATACAGTCAATGTTGGGATTA | 58.284 | 36.000 | 0.00 | 0.00 | 39.96 | 1.75 |
3758 | 4054 | 7.287696 | ACAAAGTTGAGACACTTATTTTGGGAT | 59.712 | 33.333 | 0.00 | 0.00 | 35.87 | 3.85 |
3825 | 4121 | 9.462174 | TGTTATGCTTTGTTCTATTTTTCAGTG | 57.538 | 29.630 | 0.00 | 0.00 | 0.00 | 3.66 |
3842 | 4138 | 4.258543 | TCAGTGCTTATTTTTCCCTACCG | 58.741 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
4256 | 4562 | 7.625498 | TGTGTATTATAATCCCATGTCCTCA | 57.375 | 36.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4275 | 4581 | 3.937706 | CTCATGACTGTTCCTGGTGATTC | 59.062 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
4344 | 4650 | 0.661020 | AGGCTGTTTTTGAACCGACG | 59.339 | 50.000 | 0.00 | 0.00 | 0.00 | 5.12 |
4362 | 4668 | 1.476891 | ACGTTCTGTCCGATGTATGCT | 59.523 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
4590 | 4896 | 6.727824 | AGAACACTTGGAAATATTCGTCTG | 57.272 | 37.500 | 0.00 | 0.00 | 0.00 | 3.51 |
4632 | 4938 | 5.163673 | GCAAAAGATGGTTCCTGAGAAGATC | 60.164 | 44.000 | 0.00 | 0.00 | 30.91 | 2.75 |
4657 | 4963 | 5.227569 | TCATCACATTGTCAAGGTACACT | 57.772 | 39.130 | 1.97 | 0.00 | 0.00 | 3.55 |
4722 | 5028 | 4.394920 | CCTAATCCGTTTGTTGTATGCACT | 59.605 | 41.667 | 0.00 | 0.00 | 0.00 | 4.40 |
4723 | 5029 | 5.583061 | CCTAATCCGTTTGTTGTATGCACTA | 59.417 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5655 | 5994 | 2.147387 | AGTGAACCGGCCAGGAACT | 61.147 | 57.895 | 18.74 | 14.77 | 45.00 | 3.01 |
5760 | 6099 | 4.681781 | CGTTCTAGATCAATGCCAAGAGGT | 60.682 | 45.833 | 0.00 | 0.00 | 37.19 | 3.85 |
5763 | 6102 | 2.996631 | AGATCAATGCCAAGAGGTGAC | 58.003 | 47.619 | 0.00 | 0.00 | 37.19 | 3.67 |
5772 | 6111 | 3.591254 | AAGAGGTGACCCGCTTCGC | 62.591 | 63.158 | 0.00 | 0.00 | 46.62 | 4.70 |
5773 | 6112 | 4.373116 | GAGGTGACCCGCTTCGCA | 62.373 | 66.667 | 0.00 | 0.00 | 35.12 | 5.10 |
5774 | 6113 | 3.876589 | GAGGTGACCCGCTTCGCAA | 62.877 | 63.158 | 0.00 | 0.00 | 35.12 | 4.85 |
6135 | 6474 | 0.313672 | GTATCGAGGAGCTGCAGAGG | 59.686 | 60.000 | 20.43 | 0.00 | 0.00 | 3.69 |
6451 | 6790 | 1.400142 | TCCGCAAAGCAATATTCACCG | 59.600 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
6597 | 6936 | 3.312421 | GCTGTGTCTAGTGAAAAACAGCA | 59.688 | 43.478 | 17.97 | 2.53 | 45.58 | 4.41 |
6740 | 7097 | 4.415332 | GTCTCTTGGCGACGGCGA | 62.415 | 66.667 | 18.90 | 14.23 | 41.24 | 5.54 |
6749 | 7106 | 2.101770 | CGACGGCGACCTAACTCC | 59.898 | 66.667 | 16.62 | 0.00 | 40.82 | 3.85 |
7034 | 7391 | 6.810676 | TGATCATTAGATGCTCTTCGAATAGC | 59.189 | 38.462 | 24.22 | 24.22 | 39.25 | 2.97 |
7073 | 7430 | 7.553881 | TCGATGAGGGTTTTGAATCTATTTC | 57.446 | 36.000 | 0.00 | 0.00 | 34.72 | 2.17 |
7109 | 7466 | 7.488150 | TGTGTGTGTGAATAGATCGTTAGATTC | 59.512 | 37.037 | 0.00 | 0.00 | 37.19 | 2.52 |
7122 | 7479 | 5.253330 | TCGTTAGATTCTTGAATGCCCTTT | 58.747 | 37.500 | 0.09 | 0.00 | 0.00 | 3.11 |
7124 | 7481 | 5.654497 | GTTAGATTCTTGAATGCCCTTTGG | 58.346 | 41.667 | 0.09 | 0.00 | 0.00 | 3.28 |
7133 | 7490 | 3.264947 | GAATGCCCTTTGGAGAAATTGC | 58.735 | 45.455 | 0.00 | 0.00 | 0.00 | 3.56 |
7270 | 7655 | 7.075121 | TGCTGTTACACATAAGTTTTGAATCG | 58.925 | 34.615 | 0.00 | 0.00 | 0.00 | 3.34 |
7274 | 7659 | 7.801315 | TGTTACACATAAGTTTTGAATCGCTTC | 59.199 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
7279 | 7664 | 1.541588 | AGTTTTGAATCGCTTCTGGCC | 59.458 | 47.619 | 0.00 | 0.00 | 37.74 | 5.36 |
7298 | 7683 | 5.297547 | TGGCCAAAATAACGCAAATGTAAA | 58.702 | 33.333 | 0.61 | 0.00 | 0.00 | 2.01 |
7309 | 7694 | 6.320494 | ACGCAAATGTAAAAATCTGGTACA | 57.680 | 33.333 | 0.00 | 0.00 | 32.58 | 2.90 |
7346 | 7731 | 8.879427 | ACTTCCATACCAAAATATATAAGGCC | 57.121 | 34.615 | 0.00 | 0.00 | 0.00 | 5.19 |
7347 | 7732 | 8.678798 | ACTTCCATACCAAAATATATAAGGCCT | 58.321 | 33.333 | 0.00 | 0.00 | 0.00 | 5.19 |
7348 | 7733 | 9.533831 | CTTCCATACCAAAATATATAAGGCCTT | 57.466 | 33.333 | 24.18 | 24.18 | 0.00 | 4.35 |
7349 | 7734 | 8.877864 | TCCATACCAAAATATATAAGGCCTTG | 57.122 | 34.615 | 28.77 | 8.35 | 0.00 | 3.61 |
7350 | 7735 | 8.452868 | TCCATACCAAAATATATAAGGCCTTGT | 58.547 | 33.333 | 28.77 | 24.00 | 0.00 | 3.16 |
7351 | 7736 | 9.088987 | CCATACCAAAATATATAAGGCCTTGTT | 57.911 | 33.333 | 28.77 | 17.24 | 0.00 | 2.83 |
7353 | 7738 | 7.272037 | ACCAAAATATATAAGGCCTTGTTCG | 57.728 | 36.000 | 28.77 | 0.21 | 0.00 | 3.95 |
7354 | 7739 | 6.264518 | ACCAAAATATATAAGGCCTTGTTCGG | 59.735 | 38.462 | 28.77 | 16.31 | 0.00 | 4.30 |
7355 | 7740 | 6.264518 | CCAAAATATATAAGGCCTTGTTCGGT | 59.735 | 38.462 | 28.77 | 10.68 | 0.00 | 4.69 |
7356 | 7741 | 7.201875 | CCAAAATATATAAGGCCTTGTTCGGTT | 60.202 | 37.037 | 28.77 | 12.22 | 0.00 | 4.44 |
7357 | 7742 | 6.877611 | AATATATAAGGCCTTGTTCGGTTG | 57.122 | 37.500 | 28.77 | 0.00 | 0.00 | 3.77 |
7358 | 7743 | 2.579410 | ATAAGGCCTTGTTCGGTTGT | 57.421 | 45.000 | 28.77 | 0.00 | 0.00 | 3.32 |
7359 | 7744 | 3.706600 | ATAAGGCCTTGTTCGGTTGTA | 57.293 | 42.857 | 28.77 | 3.74 | 0.00 | 2.41 |
7360 | 7745 | 1.892209 | AAGGCCTTGTTCGGTTGTAG | 58.108 | 50.000 | 19.73 | 0.00 | 0.00 | 2.74 |
7361 | 7746 | 1.053424 | AGGCCTTGTTCGGTTGTAGA | 58.947 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
7362 | 7747 | 1.002087 | AGGCCTTGTTCGGTTGTAGAG | 59.998 | 52.381 | 0.00 | 0.00 | 0.00 | 2.43 |
7363 | 7748 | 1.270678 | GGCCTTGTTCGGTTGTAGAGT | 60.271 | 52.381 | 0.00 | 0.00 | 0.00 | 3.24 |
7364 | 7749 | 2.028748 | GGCCTTGTTCGGTTGTAGAGTA | 60.029 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
7365 | 7750 | 3.369157 | GGCCTTGTTCGGTTGTAGAGTAT | 60.369 | 47.826 | 0.00 | 0.00 | 0.00 | 2.12 |
7366 | 7751 | 4.251268 | GCCTTGTTCGGTTGTAGAGTATT | 58.749 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
7367 | 7752 | 4.694037 | GCCTTGTTCGGTTGTAGAGTATTT | 59.306 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
7368 | 7753 | 5.870978 | GCCTTGTTCGGTTGTAGAGTATTTA | 59.129 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
7369 | 7754 | 6.369615 | GCCTTGTTCGGTTGTAGAGTATTTAA | 59.630 | 38.462 | 0.00 | 0.00 | 0.00 | 1.52 |
7370 | 7755 | 7.065443 | GCCTTGTTCGGTTGTAGAGTATTTAAT | 59.935 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
7371 | 7756 | 8.601476 | CCTTGTTCGGTTGTAGAGTATTTAATC | 58.399 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
7372 | 7757 | 8.483307 | TTGTTCGGTTGTAGAGTATTTAATCC | 57.517 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
7373 | 7758 | 7.844009 | TGTTCGGTTGTAGAGTATTTAATCCT | 58.156 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
7374 | 7759 | 7.977853 | TGTTCGGTTGTAGAGTATTTAATCCTC | 59.022 | 37.037 | 0.00 | 0.00 | 0.00 | 3.71 |
7375 | 7760 | 7.893124 | TCGGTTGTAGAGTATTTAATCCTCT | 57.107 | 36.000 | 5.43 | 5.43 | 38.94 | 3.69 |
7376 | 7761 | 8.985315 | TCGGTTGTAGAGTATTTAATCCTCTA | 57.015 | 34.615 | 3.59 | 3.59 | 36.90 | 2.43 |
7377 | 7762 | 9.064706 | TCGGTTGTAGAGTATTTAATCCTCTAG | 57.935 | 37.037 | 7.39 | 0.00 | 38.22 | 2.43 |
7378 | 7763 | 8.848182 | CGGTTGTAGAGTATTTAATCCTCTAGT | 58.152 | 37.037 | 7.39 | 0.00 | 38.22 | 2.57 |
7379 | 7764 | 9.968870 | GGTTGTAGAGTATTTAATCCTCTAGTG | 57.031 | 37.037 | 7.39 | 0.00 | 38.22 | 2.74 |
7394 | 7779 | 7.366847 | TCCTCTAGTGAATTTAATCCTCTGG | 57.633 | 40.000 | 0.00 | 0.00 | 0.00 | 3.86 |
7395 | 7780 | 7.132805 | TCCTCTAGTGAATTTAATCCTCTGGA | 58.867 | 38.462 | 0.00 | 0.00 | 35.55 | 3.86 |
7396 | 7781 | 7.288852 | TCCTCTAGTGAATTTAATCCTCTGGAG | 59.711 | 40.741 | 1.02 | 1.02 | 34.05 | 3.86 |
7408 | 7793 | 2.926778 | CTCTGGAGGATTGGGTGATC | 57.073 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
7409 | 7794 | 1.419387 | CTCTGGAGGATTGGGTGATCC | 59.581 | 57.143 | 0.00 | 0.00 | 44.91 | 3.36 |
7422 | 7807 | 0.831307 | GTGATCCCTCACCCTACACC | 59.169 | 60.000 | 0.00 | 0.00 | 45.06 | 4.16 |
7423 | 7808 | 0.415830 | TGATCCCTCACCCTACACCA | 59.584 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
7424 | 7809 | 1.203376 | TGATCCCTCACCCTACACCAA | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
7425 | 7810 | 1.913419 | GATCCCTCACCCTACACCAAA | 59.087 | 52.381 | 0.00 | 0.00 | 0.00 | 3.28 |
7426 | 7811 | 2.053747 | TCCCTCACCCTACACCAAAT | 57.946 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
7427 | 7812 | 1.913419 | TCCCTCACCCTACACCAAATC | 59.087 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
7428 | 7813 | 1.064685 | CCCTCACCCTACACCAAATCC | 60.065 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
7429 | 7814 | 1.064685 | CCTCACCCTACACCAAATCCC | 60.065 | 57.143 | 0.00 | 0.00 | 0.00 | 3.85 |
7430 | 7815 | 0.996583 | TCACCCTACACCAAATCCCC | 59.003 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
7431 | 7816 | 0.999712 | CACCCTACACCAAATCCCCT | 59.000 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
7432 | 7817 | 1.064685 | CACCCTACACCAAATCCCCTC | 60.065 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
7433 | 7818 | 0.180406 | CCCTACACCAAATCCCCTCG | 59.820 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
7434 | 7819 | 0.180406 | CCTACACCAAATCCCCTCGG | 59.820 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
7435 | 7820 | 0.180406 | CTACACCAAATCCCCTCGGG | 59.820 | 60.000 | 0.00 | 0.00 | 46.11 | 5.14 |
7450 | 7835 | 3.991367 | CCTCGGGGACTAAATACATGTC | 58.009 | 50.000 | 0.00 | 0.00 | 33.58 | 3.06 |
7451 | 7836 | 3.386726 | CCTCGGGGACTAAATACATGTCA | 59.613 | 47.826 | 0.00 | 0.00 | 32.84 | 3.58 |
7452 | 7837 | 4.040461 | CCTCGGGGACTAAATACATGTCAT | 59.960 | 45.833 | 0.00 | 0.00 | 32.84 | 3.06 |
7453 | 7838 | 5.454755 | CCTCGGGGACTAAATACATGTCATT | 60.455 | 44.000 | 0.00 | 0.98 | 32.84 | 2.57 |
7454 | 7839 | 5.364778 | TCGGGGACTAAATACATGTCATTG | 58.635 | 41.667 | 0.00 | 0.00 | 32.84 | 2.82 |
7455 | 7840 | 5.104693 | TCGGGGACTAAATACATGTCATTGT | 60.105 | 40.000 | 0.00 | 0.00 | 32.84 | 2.71 |
7456 | 7841 | 5.007626 | CGGGGACTAAATACATGTCATTGTG | 59.992 | 44.000 | 0.00 | 0.00 | 32.84 | 3.33 |
7457 | 7842 | 6.119536 | GGGGACTAAATACATGTCATTGTGA | 58.880 | 40.000 | 0.00 | 0.00 | 32.84 | 3.58 |
7458 | 7843 | 6.601613 | GGGGACTAAATACATGTCATTGTGAA | 59.398 | 38.462 | 0.00 | 0.00 | 32.84 | 3.18 |
7459 | 7844 | 7.285401 | GGGGACTAAATACATGTCATTGTGAAT | 59.715 | 37.037 | 0.00 | 0.00 | 32.84 | 2.57 |
7460 | 7845 | 8.686334 | GGGACTAAATACATGTCATTGTGAATT | 58.314 | 33.333 | 0.00 | 0.00 | 32.84 | 2.17 |
7461 | 7846 | 9.722056 | GGACTAAATACATGTCATTGTGAATTC | 57.278 | 33.333 | 0.00 | 0.00 | 32.84 | 2.17 |
7462 | 7847 | 9.722056 | GACTAAATACATGTCATTGTGAATTCC | 57.278 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
7463 | 7848 | 9.241919 | ACTAAATACATGTCATTGTGAATTCCA | 57.758 | 29.630 | 0.00 | 0.00 | 0.00 | 3.53 |
7468 | 7853 | 7.885009 | ACATGTCATTGTGAATTCCATATCA | 57.115 | 32.000 | 2.27 | 0.00 | 0.00 | 2.15 |
7469 | 7854 | 7.709947 | ACATGTCATTGTGAATTCCATATCAC | 58.290 | 34.615 | 2.27 | 0.00 | 44.84 | 3.06 |
7470 | 7855 | 7.558807 | ACATGTCATTGTGAATTCCATATCACT | 59.441 | 33.333 | 2.27 | 0.00 | 44.86 | 3.41 |
7471 | 7856 | 7.943079 | TGTCATTGTGAATTCCATATCACTT | 57.057 | 32.000 | 2.27 | 0.00 | 44.86 | 3.16 |
7472 | 7857 | 9.631257 | ATGTCATTGTGAATTCCATATCACTTA | 57.369 | 29.630 | 2.27 | 0.00 | 44.86 | 2.24 |
7473 | 7858 | 9.631257 | TGTCATTGTGAATTCCATATCACTTAT | 57.369 | 29.630 | 2.27 | 0.00 | 44.86 | 1.73 |
7479 | 7864 | 9.571816 | TGTGAATTCCATATCACTTATTATGCA | 57.428 | 29.630 | 2.27 | 0.00 | 44.86 | 3.96 |
7483 | 7868 | 7.848223 | TTCCATATCACTTATTATGCATCCG | 57.152 | 36.000 | 0.19 | 0.00 | 0.00 | 4.18 |
7484 | 7869 | 6.348498 | TCCATATCACTTATTATGCATCCGG | 58.652 | 40.000 | 0.19 | 0.00 | 0.00 | 5.14 |
7485 | 7870 | 6.070251 | TCCATATCACTTATTATGCATCCGGT | 60.070 | 38.462 | 0.19 | 0.00 | 0.00 | 5.28 |
7486 | 7871 | 6.599244 | CCATATCACTTATTATGCATCCGGTT | 59.401 | 38.462 | 0.19 | 0.00 | 0.00 | 4.44 |
7487 | 7872 | 7.768582 | CCATATCACTTATTATGCATCCGGTTA | 59.231 | 37.037 | 0.19 | 0.00 | 0.00 | 2.85 |
7488 | 7873 | 9.161629 | CATATCACTTATTATGCATCCGGTTAA | 57.838 | 33.333 | 0.19 | 0.00 | 0.00 | 2.01 |
7489 | 7874 | 9.905713 | ATATCACTTATTATGCATCCGGTTAAT | 57.094 | 29.630 | 0.19 | 0.00 | 0.00 | 1.40 |
7490 | 7875 | 7.667043 | TCACTTATTATGCATCCGGTTAATC | 57.333 | 36.000 | 0.19 | 0.00 | 0.00 | 1.75 |
7491 | 7876 | 6.653320 | TCACTTATTATGCATCCGGTTAATCC | 59.347 | 38.462 | 0.19 | 0.00 | 0.00 | 3.01 |
7492 | 7877 | 6.655003 | CACTTATTATGCATCCGGTTAATCCT | 59.345 | 38.462 | 0.19 | 0.00 | 0.00 | 3.24 |
7493 | 7878 | 6.879458 | ACTTATTATGCATCCGGTTAATCCTC | 59.121 | 38.462 | 0.19 | 0.00 | 0.00 | 3.71 |
7494 | 7879 | 4.974645 | TTATGCATCCGGTTAATCCTCT | 57.025 | 40.909 | 0.19 | 0.00 | 0.00 | 3.69 |
7495 | 7880 | 6.620877 | ATTATGCATCCGGTTAATCCTCTA | 57.379 | 37.500 | 0.19 | 0.00 | 0.00 | 2.43 |
7496 | 7881 | 4.543590 | ATGCATCCGGTTAATCCTCTAG | 57.456 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
7497 | 7882 | 2.632996 | TGCATCCGGTTAATCCTCTAGG | 59.367 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
7498 | 7883 | 2.613223 | GCATCCGGTTAATCCTCTAGGC | 60.613 | 54.545 | 0.00 | 0.00 | 34.44 | 3.93 |
7499 | 7884 | 1.713297 | TCCGGTTAATCCTCTAGGCC | 58.287 | 55.000 | 0.00 | 0.00 | 34.44 | 5.19 |
7500 | 7885 | 0.317479 | CCGGTTAATCCTCTAGGCCG | 59.683 | 60.000 | 0.00 | 5.36 | 36.17 | 6.13 |
7501 | 7886 | 0.319641 | CGGTTAATCCTCTAGGCCGC | 60.320 | 60.000 | 0.00 | 0.00 | 31.17 | 6.53 |
7502 | 7887 | 0.035036 | GGTTAATCCTCTAGGCCGCC | 59.965 | 60.000 | 0.00 | 0.00 | 34.44 | 6.13 |
7503 | 7888 | 0.756903 | GTTAATCCTCTAGGCCGCCA | 59.243 | 55.000 | 13.15 | 0.00 | 34.44 | 5.69 |
7504 | 7889 | 0.756903 | TTAATCCTCTAGGCCGCCAC | 59.243 | 55.000 | 13.15 | 0.00 | 34.44 | 5.01 |
7505 | 7890 | 1.119574 | TAATCCTCTAGGCCGCCACC | 61.120 | 60.000 | 13.15 | 0.00 | 34.44 | 4.61 |
7506 | 7891 | 3.696518 | ATCCTCTAGGCCGCCACCA | 62.697 | 63.158 | 13.15 | 0.00 | 34.44 | 4.17 |
7507 | 7892 | 4.162690 | CCTCTAGGCCGCCACCAC | 62.163 | 72.222 | 13.15 | 0.00 | 0.00 | 4.16 |
7508 | 7893 | 4.162690 | CTCTAGGCCGCCACCACC | 62.163 | 72.222 | 13.15 | 0.00 | 0.00 | 4.61 |
7510 | 7895 | 4.778143 | CTAGGCCGCCACCACCAC | 62.778 | 72.222 | 13.15 | 0.00 | 0.00 | 4.16 |
7517 | 7902 | 4.722700 | GCCACCACCACGATGCCT | 62.723 | 66.667 | 0.00 | 0.00 | 0.00 | 4.75 |
7518 | 7903 | 2.034066 | CCACCACCACGATGCCTT | 59.966 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
7519 | 7904 | 2.334946 | CCACCACCACGATGCCTTG | 61.335 | 63.158 | 0.00 | 0.00 | 0.00 | 3.61 |
7520 | 7905 | 2.672996 | ACCACCACGATGCCTTGC | 60.673 | 61.111 | 0.00 | 0.00 | 0.00 | 4.01 |
7521 | 7906 | 2.360350 | CCACCACGATGCCTTGCT | 60.360 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
7522 | 7907 | 2.693762 | CCACCACGATGCCTTGCTG | 61.694 | 63.158 | 0.00 | 0.00 | 0.00 | 4.41 |
7523 | 7908 | 1.968017 | CACCACGATGCCTTGCTGT | 60.968 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
7524 | 7909 | 1.228245 | ACCACGATGCCTTGCTGTT | 60.228 | 52.632 | 0.00 | 0.00 | 0.00 | 3.16 |
7525 | 7910 | 0.036164 | ACCACGATGCCTTGCTGTTA | 59.964 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
7526 | 7911 | 1.164411 | CCACGATGCCTTGCTGTTAA | 58.836 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
7527 | 7912 | 1.745087 | CCACGATGCCTTGCTGTTAAT | 59.255 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
7528 | 7913 | 2.942376 | CCACGATGCCTTGCTGTTAATA | 59.058 | 45.455 | 0.00 | 0.00 | 0.00 | 0.98 |
7529 | 7914 | 3.242739 | CCACGATGCCTTGCTGTTAATAC | 60.243 | 47.826 | 0.00 | 0.00 | 0.00 | 1.89 |
7530 | 7915 | 3.373748 | CACGATGCCTTGCTGTTAATACA | 59.626 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
7545 | 7930 | 7.450124 | TGTTAATACAGAGAGAACGAAGAGT | 57.550 | 36.000 | 0.00 | 0.00 | 0.00 | 3.24 |
7546 | 7931 | 7.306213 | TGTTAATACAGAGAGAACGAAGAGTG | 58.694 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
2 | 3 | 4.923281 | ACTTTGATTTCTAAACATTGCGGC | 59.077 | 37.500 | 0.00 | 0.00 | 0.00 | 6.53 |
41 | 43 | 5.368989 | AGTAGCTACTTTTGCAACTCAGTT | 58.631 | 37.500 | 20.95 | 0.00 | 31.13 | 3.16 |
42 | 44 | 4.962155 | AGTAGCTACTTTTGCAACTCAGT | 58.038 | 39.130 | 20.95 | 4.43 | 31.13 | 3.41 |
45 | 47 | 3.685272 | GGGAGTAGCTACTTTTGCAACTC | 59.315 | 47.826 | 26.71 | 12.81 | 36.50 | 3.01 |
61 | 63 | 9.902684 | CTCTTATATTAGATTACGGAGGGAGTA | 57.097 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
62 | 64 | 7.339976 | GCTCTTATATTAGATTACGGAGGGAGT | 59.660 | 40.741 | 0.00 | 0.00 | 0.00 | 3.85 |
63 | 65 | 7.467539 | CGCTCTTATATTAGATTACGGAGGGAG | 60.468 | 44.444 | 0.00 | 0.00 | 34.63 | 4.30 |
64 | 66 | 6.318144 | CGCTCTTATATTAGATTACGGAGGGA | 59.682 | 42.308 | 0.00 | 0.00 | 34.63 | 4.20 |
65 | 67 | 6.095160 | ACGCTCTTATATTAGATTACGGAGGG | 59.905 | 42.308 | 11.26 | 0.00 | 37.30 | 4.30 |
66 | 68 | 7.086230 | ACGCTCTTATATTAGATTACGGAGG | 57.914 | 40.000 | 11.26 | 0.00 | 0.00 | 4.30 |
67 | 69 | 8.967552 | AAACGCTCTTATATTAGATTACGGAG | 57.032 | 34.615 | 11.26 | 0.00 | 0.00 | 4.63 |
83 | 85 | 9.570488 | CACTACTTTAGTAATCTAAACGCTCTT | 57.430 | 33.333 | 0.00 | 0.00 | 40.05 | 2.85 |
84 | 86 | 8.738106 | ACACTACTTTAGTAATCTAAACGCTCT | 58.262 | 33.333 | 0.00 | 0.00 | 40.05 | 4.09 |
85 | 87 | 8.908172 | ACACTACTTTAGTAATCTAAACGCTC | 57.092 | 34.615 | 0.00 | 0.00 | 40.05 | 5.03 |
86 | 88 | 9.351570 | GAACACTACTTTAGTAATCTAAACGCT | 57.648 | 33.333 | 0.00 | 0.00 | 40.05 | 5.07 |
87 | 89 | 9.351570 | AGAACACTACTTTAGTAATCTAAACGC | 57.648 | 33.333 | 0.00 | 0.00 | 40.05 | 4.84 |
93 | 95 | 9.351570 | GCGTTTAGAACACTACTTTAGTAATCT | 57.648 | 33.333 | 5.76 | 5.76 | 37.23 | 2.40 |
94 | 96 | 9.351570 | AGCGTTTAGAACACTACTTTAGTAATC | 57.648 | 33.333 | 0.00 | 0.00 | 37.23 | 1.75 |
95 | 97 | 9.351570 | GAGCGTTTAGAACACTACTTTAGTAAT | 57.648 | 33.333 | 0.00 | 0.00 | 37.23 | 1.89 |
96 | 98 | 8.571336 | AGAGCGTTTAGAACACTACTTTAGTAA | 58.429 | 33.333 | 0.00 | 0.00 | 37.23 | 2.24 |
97 | 99 | 8.103948 | AGAGCGTTTAGAACACTACTTTAGTA | 57.896 | 34.615 | 0.00 | 0.00 | 37.23 | 1.82 |
98 | 100 | 6.979465 | AGAGCGTTTAGAACACTACTTTAGT | 58.021 | 36.000 | 0.00 | 0.00 | 40.28 | 2.24 |
99 | 101 | 7.870588 | AAGAGCGTTTAGAACACTACTTTAG | 57.129 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
114 | 116 | 9.530633 | CCTCTGTAAACTAATATAAGAGCGTTT | 57.469 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
115 | 117 | 8.142551 | CCCTCTGTAAACTAATATAAGAGCGTT | 58.857 | 37.037 | 0.00 | 0.00 | 0.00 | 4.84 |
116 | 118 | 7.504911 | TCCCTCTGTAAACTAATATAAGAGCGT | 59.495 | 37.037 | 0.00 | 0.00 | 0.00 | 5.07 |
117 | 119 | 7.883217 | TCCCTCTGTAAACTAATATAAGAGCG | 58.117 | 38.462 | 0.00 | 0.00 | 0.00 | 5.03 |
118 | 120 | 8.862085 | ACTCCCTCTGTAAACTAATATAAGAGC | 58.138 | 37.037 | 0.00 | 0.00 | 0.00 | 4.09 |
124 | 126 | 9.939424 | AGAAGTACTCCCTCTGTAAACTAATAT | 57.061 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
125 | 127 | 9.406113 | GAGAAGTACTCCCTCTGTAAACTAATA | 57.594 | 37.037 | 14.56 | 0.00 | 39.53 | 0.98 |
126 | 128 | 8.117312 | AGAGAAGTACTCCCTCTGTAAACTAAT | 58.883 | 37.037 | 20.55 | 0.91 | 45.96 | 1.73 |
127 | 129 | 7.468496 | AGAGAAGTACTCCCTCTGTAAACTAA | 58.532 | 38.462 | 20.55 | 0.00 | 45.96 | 2.24 |
128 | 130 | 7.030234 | AGAGAAGTACTCCCTCTGTAAACTA | 57.970 | 40.000 | 20.55 | 0.00 | 45.96 | 2.24 |
129 | 131 | 5.894653 | AGAGAAGTACTCCCTCTGTAAACT | 58.105 | 41.667 | 20.55 | 2.47 | 45.96 | 2.66 |
130 | 132 | 7.885009 | ATAGAGAAGTACTCCCTCTGTAAAC | 57.115 | 40.000 | 25.89 | 4.93 | 45.96 | 2.01 |
131 | 133 | 8.896722 | AAATAGAGAAGTACTCCCTCTGTAAA | 57.103 | 34.615 | 25.89 | 13.93 | 45.96 | 2.01 |
134 | 136 | 9.138596 | GAATAAATAGAGAAGTACTCCCTCTGT | 57.861 | 37.037 | 25.89 | 20.42 | 45.96 | 3.41 |
135 | 137 | 9.137459 | TGAATAAATAGAGAAGTACTCCCTCTG | 57.863 | 37.037 | 25.89 | 0.00 | 45.96 | 3.35 |
136 | 138 | 9.716556 | TTGAATAAATAGAGAAGTACTCCCTCT | 57.283 | 33.333 | 23.11 | 23.11 | 45.96 | 3.69 |
137 | 139 | 9.752961 | GTTGAATAAATAGAGAAGTACTCCCTC | 57.247 | 37.037 | 14.19 | 14.19 | 45.96 | 4.30 |
138 | 140 | 8.414778 | CGTTGAATAAATAGAGAAGTACTCCCT | 58.585 | 37.037 | 0.00 | 0.00 | 45.96 | 4.20 |
139 | 141 | 8.411683 | TCGTTGAATAAATAGAGAAGTACTCCC | 58.588 | 37.037 | 0.00 | 0.00 | 45.96 | 4.30 |
140 | 142 | 9.798994 | TTCGTTGAATAAATAGAGAAGTACTCC | 57.201 | 33.333 | 0.00 | 0.00 | 45.96 | 3.85 |
324 | 327 | 6.070251 | TGACATGTCAGGTTAATAGACCATGT | 60.070 | 38.462 | 24.56 | 10.76 | 42.35 | 3.21 |
331 | 334 | 7.200455 | TGTACGATGACATGTCAGGTTAATAG | 58.800 | 38.462 | 30.63 | 16.73 | 43.61 | 1.73 |
484 | 522 | 7.363094 | GGACGGGTATTTCATGTATTTTCCAAA | 60.363 | 37.037 | 0.00 | 0.00 | 0.00 | 3.28 |
579 | 621 | 5.163713 | GGAGTGCGATGCTATCTTTCTTTTT | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
580 | 622 | 4.333926 | GGAGTGCGATGCTATCTTTCTTTT | 59.666 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
581 | 623 | 3.873952 | GGAGTGCGATGCTATCTTTCTTT | 59.126 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
582 | 624 | 3.118629 | TGGAGTGCGATGCTATCTTTCTT | 60.119 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
583 | 625 | 2.432146 | TGGAGTGCGATGCTATCTTTCT | 59.568 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
584 | 626 | 2.799412 | CTGGAGTGCGATGCTATCTTTC | 59.201 | 50.000 | 0.00 | 0.00 | 0.00 | 2.62 |
585 | 627 | 2.831333 | CTGGAGTGCGATGCTATCTTT | 58.169 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
586 | 628 | 1.539929 | GCTGGAGTGCGATGCTATCTT | 60.540 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
587 | 629 | 0.033228 | GCTGGAGTGCGATGCTATCT | 59.967 | 55.000 | 0.00 | 0.00 | 0.00 | 1.98 |
588 | 630 | 0.249615 | TGCTGGAGTGCGATGCTATC | 60.250 | 55.000 | 0.00 | 0.00 | 35.36 | 2.08 |
589 | 631 | 0.249784 | CTGCTGGAGTGCGATGCTAT | 60.250 | 55.000 | 0.00 | 0.00 | 35.36 | 2.97 |
590 | 632 | 1.142531 | CTGCTGGAGTGCGATGCTA | 59.857 | 57.895 | 0.00 | 0.00 | 35.36 | 3.49 |
591 | 633 | 2.125229 | CTGCTGGAGTGCGATGCT | 60.125 | 61.111 | 0.00 | 0.00 | 35.36 | 3.79 |
592 | 634 | 3.200593 | CCTGCTGGAGTGCGATGC | 61.201 | 66.667 | 2.92 | 0.00 | 35.36 | 3.91 |
593 | 635 | 1.812922 | GTCCTGCTGGAGTGCGATG | 60.813 | 63.158 | 13.36 | 0.00 | 44.16 | 3.84 |
594 | 636 | 2.581354 | GTCCTGCTGGAGTGCGAT | 59.419 | 61.111 | 13.36 | 0.00 | 44.16 | 4.58 |
595 | 637 | 3.695606 | GGTCCTGCTGGAGTGCGA | 61.696 | 66.667 | 13.36 | 0.00 | 44.16 | 5.10 |
596 | 638 | 4.767255 | GGGTCCTGCTGGAGTGCG | 62.767 | 72.222 | 13.36 | 0.00 | 44.16 | 5.34 |
597 | 639 | 4.767255 | CGGGTCCTGCTGGAGTGC | 62.767 | 72.222 | 13.36 | 1.20 | 44.16 | 4.40 |
598 | 640 | 4.087892 | CCGGGTCCTGCTGGAGTG | 62.088 | 72.222 | 13.36 | 5.70 | 44.16 | 3.51 |
614 | 656 | 1.153309 | ATTTACGGCTGCGGTACCC | 60.153 | 57.895 | 18.08 | 0.00 | 0.00 | 3.69 |
617 | 659 | 0.103572 | GAGGATTTACGGCTGCGGTA | 59.896 | 55.000 | 15.00 | 15.00 | 0.00 | 4.02 |
624 | 667 | 1.202545 | GGAGACTGGAGGATTTACGGC | 60.203 | 57.143 | 0.00 | 0.00 | 0.00 | 5.68 |
640 | 683 | 2.851045 | GGTTTTGGGCAGGGGAGA | 59.149 | 61.111 | 0.00 | 0.00 | 0.00 | 3.71 |
656 | 699 | 1.153706 | CGGTGGTGGCTAGTTACGG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
732 | 776 | 3.311596 | GGCAGTTTCGTACTTTCACAAGT | 59.688 | 43.478 | 0.00 | 0.00 | 45.73 | 3.16 |
781 | 825 | 2.723464 | TTAGGGCTGTGGGGGCAAAC | 62.723 | 60.000 | 0.00 | 0.00 | 0.00 | 2.93 |
786 | 830 | 2.123726 | GCATTAGGGCTGTGGGGG | 60.124 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
1284 | 1338 | 2.614057 | CAATAAACGCTCCATCCAGACC | 59.386 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1426 | 1488 | 0.826715 | TAGCCTACAGAAGCAGCCAG | 59.173 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1460 | 1522 | 3.369892 | CCTCACCCCAGAAGTGAATACTG | 60.370 | 52.174 | 0.00 | 0.00 | 43.36 | 2.74 |
1497 | 1567 | 0.610232 | GCCATGACAGCTGAAACCCT | 60.610 | 55.000 | 23.35 | 0.00 | 0.00 | 4.34 |
1524 | 1594 | 0.179000 | GCCCACCTCATCCTACACAG | 59.821 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1587 | 1657 | 9.314321 | GTCTAACATGTTATATGTGCAAGTAGT | 57.686 | 33.333 | 18.35 | 0.00 | 31.80 | 2.73 |
1603 | 1673 | 7.338710 | AGGCATGTAAGTATTGTCTAACATGT | 58.661 | 34.615 | 13.07 | 0.00 | 43.74 | 3.21 |
1610 | 1680 | 4.408921 | TGGCTAGGCATGTAAGTATTGTCT | 59.591 | 41.667 | 16.16 | 0.00 | 0.00 | 3.41 |
1685 | 1764 | 8.526978 | TCAGCATAGCAGAAATAGGTCTATAAG | 58.473 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
1700 | 1779 | 1.535896 | GCATCCATGTCAGCATAGCAG | 59.464 | 52.381 | 0.00 | 0.00 | 33.30 | 4.24 |
1701 | 1780 | 1.142262 | AGCATCCATGTCAGCATAGCA | 59.858 | 47.619 | 0.00 | 0.00 | 33.30 | 3.49 |
1725 | 1804 | 1.955778 | CAAGTCACCAATCTGCACCAA | 59.044 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
1813 | 1892 | 2.238353 | CTTCGTGTGAAGTGCCAGG | 58.762 | 57.895 | 0.00 | 0.00 | 45.38 | 4.45 |
1925 | 2004 | 0.179084 | ACCTGTCGAACCACACACTG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
1952 | 2031 | 8.602424 | TCAAACTTGATAGTTCTTCCCTGATAA | 58.398 | 33.333 | 0.00 | 0.00 | 43.74 | 1.75 |
1957 | 2036 | 9.981460 | ATTAATCAAACTTGATAGTTCTTCCCT | 57.019 | 29.630 | 5.40 | 0.00 | 46.60 | 4.20 |
1979 | 2058 | 3.456644 | TGGCCGAAAGTATCCAGGATTAA | 59.543 | 43.478 | 7.44 | 0.00 | 0.00 | 1.40 |
2014 | 2093 | 1.209504 | GGGTACTTCACAGCCTATGCA | 59.790 | 52.381 | 0.00 | 0.00 | 41.13 | 3.96 |
2081 | 2364 | 4.131596 | GGTTAAGTTTGGCTGTACACTCA | 58.868 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
2083 | 2366 | 4.159244 | TGGTTAAGTTTGGCTGTACACT | 57.841 | 40.909 | 0.00 | 0.00 | 0.00 | 3.55 |
2140 | 2425 | 6.255453 | AGCACACACATTCAAACATACAAAAC | 59.745 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
2141 | 2426 | 6.255237 | CAGCACACACATTCAAACATACAAAA | 59.745 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
2142 | 2427 | 5.747675 | CAGCACACACATTCAAACATACAAA | 59.252 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2143 | 2428 | 5.280164 | CAGCACACACATTCAAACATACAA | 58.720 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
2144 | 2429 | 4.261530 | CCAGCACACACATTCAAACATACA | 60.262 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2145 | 2430 | 4.229096 | CCAGCACACACATTCAAACATAC | 58.771 | 43.478 | 0.00 | 0.00 | 0.00 | 2.39 |
2146 | 2431 | 3.888323 | ACCAGCACACACATTCAAACATA | 59.112 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
2147 | 2432 | 2.694628 | ACCAGCACACACATTCAAACAT | 59.305 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
2148 | 2433 | 2.098614 | ACCAGCACACACATTCAAACA | 58.901 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
2149 | 2434 | 2.869233 | ACCAGCACACACATTCAAAC | 57.131 | 45.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2150 | 2435 | 6.432472 | TCAATATACCAGCACACACATTCAAA | 59.568 | 34.615 | 0.00 | 0.00 | 0.00 | 2.69 |
2151 | 2436 | 5.942826 | TCAATATACCAGCACACACATTCAA | 59.057 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2152 | 2437 | 5.495640 | TCAATATACCAGCACACACATTCA | 58.504 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2153 | 2438 | 6.435430 | TTCAATATACCAGCACACACATTC | 57.565 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
2154 | 2439 | 7.093814 | ACAATTCAATATACCAGCACACACATT | 60.094 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
2155 | 2440 | 6.377996 | ACAATTCAATATACCAGCACACACAT | 59.622 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
2156 | 2441 | 5.709631 | ACAATTCAATATACCAGCACACACA | 59.290 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2157 | 2442 | 6.029607 | CACAATTCAATATACCAGCACACAC | 58.970 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2158 | 2443 | 5.709631 | ACACAATTCAATATACCAGCACACA | 59.290 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
2159 | 2444 | 6.194796 | ACACAATTCAATATACCAGCACAC | 57.805 | 37.500 | 0.00 | 0.00 | 0.00 | 3.82 |
2160 | 2445 | 7.334858 | TCTACACAATTCAATATACCAGCACA | 58.665 | 34.615 | 0.00 | 0.00 | 0.00 | 4.57 |
2161 | 2446 | 7.786178 | TCTACACAATTCAATATACCAGCAC | 57.214 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2162 | 2447 | 8.839343 | CAATCTACACAATTCAATATACCAGCA | 58.161 | 33.333 | 0.00 | 0.00 | 0.00 | 4.41 |
2163 | 2448 | 8.840321 | ACAATCTACACAATTCAATATACCAGC | 58.160 | 33.333 | 0.00 | 0.00 | 0.00 | 4.85 |
2165 | 2450 | 9.898152 | TGACAATCTACACAATTCAATATACCA | 57.102 | 29.630 | 0.00 | 0.00 | 0.00 | 3.25 |
2171 | 2456 | 9.725019 | TTCTACTGACAATCTACACAATTCAAT | 57.275 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
2172 | 2457 | 9.208022 | CTTCTACTGACAATCTACACAATTCAA | 57.792 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2173 | 2458 | 8.585018 | TCTTCTACTGACAATCTACACAATTCA | 58.415 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2174 | 2459 | 8.865001 | GTCTTCTACTGACAATCTACACAATTC | 58.135 | 37.037 | 0.00 | 0.00 | 34.80 | 2.17 |
2175 | 2460 | 8.589338 | AGTCTTCTACTGACAATCTACACAATT | 58.411 | 33.333 | 0.00 | 0.00 | 36.93 | 2.32 |
2176 | 2461 | 8.128322 | AGTCTTCTACTGACAATCTACACAAT | 57.872 | 34.615 | 0.00 | 0.00 | 36.93 | 2.71 |
2177 | 2462 | 7.309255 | GGAGTCTTCTACTGACAATCTACACAA | 60.309 | 40.741 | 0.00 | 0.00 | 39.07 | 3.33 |
2178 | 2463 | 6.151312 | GGAGTCTTCTACTGACAATCTACACA | 59.849 | 42.308 | 0.00 | 0.00 | 39.07 | 3.72 |
2179 | 2464 | 6.557110 | GGAGTCTTCTACTGACAATCTACAC | 58.443 | 44.000 | 0.00 | 0.00 | 39.07 | 2.90 |
2180 | 2465 | 5.354513 | CGGAGTCTTCTACTGACAATCTACA | 59.645 | 44.000 | 0.00 | 0.00 | 39.07 | 2.74 |
2181 | 2466 | 5.354792 | ACGGAGTCTTCTACTGACAATCTAC | 59.645 | 44.000 | 0.00 | 0.00 | 29.74 | 2.59 |
2182 | 2467 | 5.498393 | ACGGAGTCTTCTACTGACAATCTA | 58.502 | 41.667 | 0.00 | 0.00 | 29.74 | 1.98 |
2183 | 2468 | 4.337145 | ACGGAGTCTTCTACTGACAATCT | 58.663 | 43.478 | 0.00 | 0.00 | 29.74 | 2.40 |
2184 | 2469 | 4.705337 | ACGGAGTCTTCTACTGACAATC | 57.295 | 45.455 | 0.00 | 0.00 | 29.74 | 2.67 |
2185 | 2470 | 5.470047 | AAACGGAGTCTTCTACTGACAAT | 57.530 | 39.130 | 0.00 | 0.00 | 45.00 | 2.71 |
2186 | 2471 | 4.931661 | AAACGGAGTCTTCTACTGACAA | 57.068 | 40.909 | 0.00 | 0.00 | 45.00 | 3.18 |
2187 | 2472 | 4.098960 | ACAAAACGGAGTCTTCTACTGACA | 59.901 | 41.667 | 0.00 | 0.00 | 45.00 | 3.58 |
2188 | 2473 | 4.618965 | ACAAAACGGAGTCTTCTACTGAC | 58.381 | 43.478 | 0.00 | 0.00 | 45.00 | 3.51 |
2189 | 2474 | 4.931661 | ACAAAACGGAGTCTTCTACTGA | 57.068 | 40.909 | 0.00 | 0.00 | 45.00 | 3.41 |
2190 | 2475 | 6.157211 | ACATACAAAACGGAGTCTTCTACTG | 58.843 | 40.000 | 0.00 | 0.00 | 45.00 | 2.74 |
2191 | 2476 | 6.342338 | ACATACAAAACGGAGTCTTCTACT | 57.658 | 37.500 | 0.00 | 0.00 | 45.00 | 2.57 |
2192 | 2477 | 7.170320 | TCAAACATACAAAACGGAGTCTTCTAC | 59.830 | 37.037 | 0.00 | 0.00 | 45.00 | 2.59 |
2193 | 2478 | 7.211573 | TCAAACATACAAAACGGAGTCTTCTA | 58.788 | 34.615 | 0.00 | 0.00 | 45.00 | 2.10 |
2194 | 2479 | 6.053005 | TCAAACATACAAAACGGAGTCTTCT | 58.947 | 36.000 | 0.00 | 0.00 | 45.00 | 2.85 |
2195 | 2480 | 6.295039 | TCAAACATACAAAACGGAGTCTTC | 57.705 | 37.500 | 0.00 | 0.00 | 45.00 | 2.87 |
2196 | 2481 | 6.687081 | TTCAAACATACAAAACGGAGTCTT | 57.313 | 33.333 | 0.00 | 0.00 | 45.00 | 3.01 |
2197 | 2482 | 6.262273 | ACATTCAAACATACAAAACGGAGTCT | 59.738 | 34.615 | 0.00 | 0.00 | 45.00 | 3.24 |
2198 | 2483 | 6.359617 | CACATTCAAACATACAAAACGGAGTC | 59.640 | 38.462 | 0.00 | 0.00 | 45.00 | 3.36 |
2200 | 2485 | 6.142161 | CACACATTCAAACATACAAAACGGAG | 59.858 | 38.462 | 0.00 | 0.00 | 0.00 | 4.63 |
2201 | 2486 | 5.974158 | CACACATTCAAACATACAAAACGGA | 59.026 | 36.000 | 0.00 | 0.00 | 0.00 | 4.69 |
2202 | 2487 | 5.746245 | ACACACATTCAAACATACAAAACGG | 59.254 | 36.000 | 0.00 | 0.00 | 0.00 | 4.44 |
2203 | 2488 | 6.626363 | CACACACATTCAAACATACAAAACG | 58.374 | 36.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2256 | 2541 | 5.242434 | TGCCTTTCTAGATAACTTTCGCAA | 58.758 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
2350 | 2639 | 1.630369 | TCCACCTCTGTTTCATGGGAG | 59.370 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2423 | 2712 | 2.695666 | TGCTACTGCTCAGGGATAAGTC | 59.304 | 50.000 | 1.66 | 0.00 | 40.48 | 3.01 |
2492 | 2781 | 3.889538 | AGGTTAGAAACTTGGCTTCCAAC | 59.110 | 43.478 | 0.00 | 0.00 | 38.75 | 3.77 |
2735 | 3024 | 1.798735 | CGTCTGCATTGCCAGGAAG | 59.201 | 57.895 | 6.12 | 0.00 | 33.64 | 3.46 |
2875 | 3164 | 8.084073 | GGAAATGAAGAACTCACATTTGAATCA | 58.916 | 33.333 | 17.20 | 0.00 | 41.96 | 2.57 |
3307 | 3596 | 2.674796 | AGGAGTAAACGACTGATGCC | 57.325 | 50.000 | 0.00 | 0.00 | 39.06 | 4.40 |
3325 | 3614 | 4.122046 | CAAAAAGGTCAAAGGGAGCAAAG | 58.878 | 43.478 | 0.00 | 0.00 | 46.51 | 2.77 |
3436 | 3725 | 3.485743 | CGCGTCACATCAGAATCGATTAA | 59.514 | 43.478 | 11.38 | 0.00 | 0.00 | 1.40 |
3442 | 3731 | 1.849219 | GAGTCGCGTCACATCAGAATC | 59.151 | 52.381 | 5.77 | 0.00 | 0.00 | 2.52 |
3445 | 3734 | 1.241315 | TGGAGTCGCGTCACATCAGA | 61.241 | 55.000 | 5.77 | 0.00 | 0.00 | 3.27 |
3446 | 3735 | 0.179127 | ATGGAGTCGCGTCACATCAG | 60.179 | 55.000 | 5.77 | 0.00 | 0.00 | 2.90 |
3528 | 3817 | 7.600375 | CAGACTACACTGTTGAGTTGTATCAAT | 59.400 | 37.037 | 0.00 | 0.00 | 41.05 | 2.57 |
3758 | 4054 | 4.775780 | CCACCGAATATATTACTCCCTCCA | 59.224 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
3823 | 4119 | 3.626217 | CCTCGGTAGGGAAAAATAAGCAC | 59.374 | 47.826 | 0.00 | 0.00 | 39.48 | 4.40 |
3842 | 4138 | 2.277084 | CATACGGCCAAACACTACCTC | 58.723 | 52.381 | 2.24 | 0.00 | 0.00 | 3.85 |
4017 | 4321 | 4.423732 | CCACTTCAACAGGAACAAACAAG | 58.576 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
4018 | 4322 | 3.367910 | GCCACTTCAACAGGAACAAACAA | 60.368 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
4019 | 4323 | 2.165437 | GCCACTTCAACAGGAACAAACA | 59.835 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
4020 | 4324 | 2.165437 | TGCCACTTCAACAGGAACAAAC | 59.835 | 45.455 | 0.00 | 0.00 | 0.00 | 2.93 |
4021 | 4325 | 2.451490 | TGCCACTTCAACAGGAACAAA | 58.549 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
4022 | 4326 | 2.136298 | TGCCACTTCAACAGGAACAA | 57.864 | 45.000 | 0.00 | 0.00 | 0.00 | 2.83 |
4023 | 4327 | 2.136298 | TTGCCACTTCAACAGGAACA | 57.864 | 45.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4256 | 4562 | 4.226846 | AGATGAATCACCAGGAACAGTCAT | 59.773 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
4275 | 4581 | 7.498239 | TCCTGAATGAAAAGCAGAAGATAGATG | 59.502 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
4344 | 4650 | 3.165058 | TGAGCATACATCGGACAGAAC | 57.835 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
4362 | 4668 | 6.374053 | TGTCATTGAGTTCAGAACAAAGTTGA | 59.626 | 34.615 | 15.85 | 8.53 | 0.00 | 3.18 |
4632 | 4938 | 4.450757 | TGTACCTTGACAATGTGATGAACG | 59.549 | 41.667 | 6.39 | 0.00 | 0.00 | 3.95 |
4657 | 4963 | 2.835580 | TGTACCGTCGATTTCCCAAA | 57.164 | 45.000 | 0.00 | 0.00 | 0.00 | 3.28 |
4722 | 5028 | 4.606697 | AGACCCCAGTAGCTCCTACATATA | 59.393 | 45.833 | 0.00 | 0.00 | 39.22 | 0.86 |
4723 | 5029 | 3.403051 | AGACCCCAGTAGCTCCTACATAT | 59.597 | 47.826 | 0.00 | 0.00 | 39.22 | 1.78 |
5268 | 5594 | 7.600065 | CACATCTGACTGATTTCCAAGAAATT | 58.400 | 34.615 | 4.20 | 0.00 | 32.05 | 1.82 |
5655 | 5994 | 0.030195 | TCCCAGGCATCATACCTCCA | 60.030 | 55.000 | 0.00 | 0.00 | 34.42 | 3.86 |
5772 | 6111 | 0.464735 | TCAACGGACCCTGGTTGTTG | 60.465 | 55.000 | 20.57 | 20.57 | 43.04 | 3.33 |
5773 | 6112 | 0.476771 | ATCAACGGACCCTGGTTGTT | 59.523 | 50.000 | 9.66 | 0.00 | 43.04 | 2.83 |
5774 | 6113 | 0.476771 | AATCAACGGACCCTGGTTGT | 59.523 | 50.000 | 9.66 | 0.00 | 43.04 | 3.32 |
6135 | 6474 | 1.204146 | TCTCAGGGTGGTAATCAGGC | 58.796 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6451 | 6790 | 0.037975 | TCTAGGGTTTTCGTCACGGC | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
6486 | 6825 | 1.839354 | TGTGAGCTCAATATGGCCTGA | 59.161 | 47.619 | 20.19 | 0.00 | 0.00 | 3.86 |
6597 | 6936 | 9.998752 | ACCTAAGCTATAGAGAATACACCATAT | 57.001 | 33.333 | 3.21 | 0.00 | 0.00 | 1.78 |
6749 | 7106 | 3.801997 | ATTCCCAGGCTCCAGCGG | 61.802 | 66.667 | 0.00 | 0.00 | 43.26 | 5.52 |
6998 | 7355 | 5.514204 | GCATCTAATGATCAAAGCAACACAC | 59.486 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
6999 | 7356 | 5.416639 | AGCATCTAATGATCAAAGCAACACA | 59.583 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
7034 | 7391 | 4.418392 | CTCATCGAAGGGCATTCAAAAAG | 58.582 | 43.478 | 12.78 | 0.34 | 37.83 | 2.27 |
7073 | 7430 | 2.209273 | TCACACACACATCGAACCTTG | 58.791 | 47.619 | 0.00 | 0.00 | 0.00 | 3.61 |
7076 | 7433 | 4.242475 | TCTATTCACACACACATCGAACC | 58.758 | 43.478 | 0.00 | 0.00 | 0.00 | 3.62 |
7109 | 7466 | 4.813750 | ATTTCTCCAAAGGGCATTCAAG | 57.186 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
7122 | 7479 | 5.738783 | GCAAACTAACCTTGCAATTTCTCCA | 60.739 | 40.000 | 0.00 | 0.00 | 46.78 | 3.86 |
7124 | 7481 | 5.829233 | GCAAACTAACCTTGCAATTTCTC | 57.171 | 39.130 | 0.00 | 0.00 | 46.78 | 2.87 |
7133 | 7490 | 6.507023 | AGAAACATGAAGCAAACTAACCTTG | 58.493 | 36.000 | 0.00 | 0.00 | 0.00 | 3.61 |
7249 | 7612 | 8.015658 | AGAAGCGATTCAAAACTTATGTGTAAC | 58.984 | 33.333 | 16.78 | 0.00 | 37.35 | 2.50 |
7252 | 7615 | 6.373779 | CAGAAGCGATTCAAAACTTATGTGT | 58.626 | 36.000 | 16.78 | 0.00 | 29.15 | 3.72 |
7253 | 7616 | 5.796935 | CCAGAAGCGATTCAAAACTTATGTG | 59.203 | 40.000 | 16.78 | 0.66 | 31.18 | 3.21 |
7254 | 7617 | 5.619981 | GCCAGAAGCGATTCAAAACTTATGT | 60.620 | 40.000 | 16.78 | 0.00 | 31.18 | 2.29 |
7255 | 7618 | 4.795278 | GCCAGAAGCGATTCAAAACTTATG | 59.205 | 41.667 | 16.78 | 2.15 | 32.54 | 1.90 |
7257 | 7620 | 3.190535 | GGCCAGAAGCGATTCAAAACTTA | 59.809 | 43.478 | 16.78 | 0.00 | 45.17 | 2.24 |
7270 | 7655 | 1.067915 | TGCGTTATTTTGGCCAGAAGC | 60.068 | 47.619 | 14.78 | 12.20 | 42.60 | 3.86 |
7274 | 7659 | 3.324993 | ACATTTGCGTTATTTTGGCCAG | 58.675 | 40.909 | 5.11 | 0.00 | 0.00 | 4.85 |
7279 | 7664 | 9.527566 | CCAGATTTTTACATTTGCGTTATTTTG | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
7323 | 7708 | 9.308000 | CAAGGCCTTATATATTTTGGTATGGAA | 57.692 | 33.333 | 20.00 | 0.00 | 0.00 | 3.53 |
7338 | 7723 | 3.706600 | ACAACCGAACAAGGCCTTATA | 57.293 | 42.857 | 20.00 | 0.00 | 33.69 | 0.98 |
7340 | 7725 | 2.633967 | TCTACAACCGAACAAGGCCTTA | 59.366 | 45.455 | 20.00 | 0.00 | 33.69 | 2.69 |
7344 | 7729 | 2.165319 | ACTCTACAACCGAACAAGGC | 57.835 | 50.000 | 0.00 | 0.00 | 33.69 | 4.35 |
7345 | 7730 | 7.894376 | TTAAATACTCTACAACCGAACAAGG | 57.106 | 36.000 | 0.00 | 0.00 | 37.30 | 3.61 |
7346 | 7731 | 8.601476 | GGATTAAATACTCTACAACCGAACAAG | 58.399 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
7347 | 7732 | 8.316214 | AGGATTAAATACTCTACAACCGAACAA | 58.684 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
7348 | 7733 | 7.844009 | AGGATTAAATACTCTACAACCGAACA | 58.156 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
7349 | 7734 | 8.350238 | GAGGATTAAATACTCTACAACCGAAC | 57.650 | 38.462 | 0.00 | 0.00 | 37.27 | 3.95 |
7368 | 7753 | 8.435982 | CCAGAGGATTAAATTCACTAGAGGATT | 58.564 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
7369 | 7754 | 7.791766 | TCCAGAGGATTAAATTCACTAGAGGAT | 59.208 | 37.037 | 0.00 | 0.00 | 0.00 | 3.24 |
7370 | 7755 | 7.132805 | TCCAGAGGATTAAATTCACTAGAGGA | 58.867 | 38.462 | 0.00 | 0.00 | 0.00 | 3.71 |
7371 | 7756 | 7.366847 | TCCAGAGGATTAAATTCACTAGAGG | 57.633 | 40.000 | 0.00 | 0.00 | 0.00 | 3.69 |
7388 | 7773 | 3.882822 | GGATCACCCAATCCTCCAGAGG | 61.883 | 59.091 | 7.43 | 7.43 | 41.78 | 3.69 |
7389 | 7774 | 1.419387 | GGATCACCCAATCCTCCAGAG | 59.581 | 57.143 | 0.00 | 0.00 | 41.78 | 3.35 |
7390 | 7775 | 1.511613 | GGATCACCCAATCCTCCAGA | 58.488 | 55.000 | 0.00 | 0.00 | 41.78 | 3.86 |
7403 | 7788 | 0.831307 | GGTGTAGGGTGAGGGATCAC | 59.169 | 60.000 | 0.00 | 0.00 | 39.73 | 3.06 |
7404 | 7789 | 0.415830 | TGGTGTAGGGTGAGGGATCA | 59.584 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
7405 | 7790 | 1.580059 | TTGGTGTAGGGTGAGGGATC | 58.420 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
7406 | 7791 | 2.053747 | TTTGGTGTAGGGTGAGGGAT | 57.946 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
7407 | 7792 | 1.913419 | GATTTGGTGTAGGGTGAGGGA | 59.087 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
7408 | 7793 | 1.064685 | GGATTTGGTGTAGGGTGAGGG | 60.065 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
7409 | 7794 | 1.064685 | GGGATTTGGTGTAGGGTGAGG | 60.065 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
7410 | 7795 | 1.064685 | GGGGATTTGGTGTAGGGTGAG | 60.065 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
7411 | 7796 | 0.996583 | GGGGATTTGGTGTAGGGTGA | 59.003 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
7412 | 7797 | 0.999712 | AGGGGATTTGGTGTAGGGTG | 59.000 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
7413 | 7798 | 1.296002 | GAGGGGATTTGGTGTAGGGT | 58.704 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
7414 | 7799 | 0.180406 | CGAGGGGATTTGGTGTAGGG | 59.820 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
7415 | 7800 | 0.180406 | CCGAGGGGATTTGGTGTAGG | 59.820 | 60.000 | 0.00 | 0.00 | 34.06 | 3.18 |
7416 | 7801 | 3.780624 | CCGAGGGGATTTGGTGTAG | 57.219 | 57.895 | 0.00 | 0.00 | 34.06 | 2.74 |
7428 | 7813 | 2.704065 | ACATGTATTTAGTCCCCGAGGG | 59.296 | 50.000 | 0.00 | 0.00 | 46.11 | 4.30 |
7429 | 7814 | 3.386726 | TGACATGTATTTAGTCCCCGAGG | 59.613 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
7430 | 7815 | 4.665833 | TGACATGTATTTAGTCCCCGAG | 57.334 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
7431 | 7816 | 5.104693 | ACAATGACATGTATTTAGTCCCCGA | 60.105 | 40.000 | 0.00 | 0.00 | 0.00 | 5.14 |
7432 | 7817 | 5.007626 | CACAATGACATGTATTTAGTCCCCG | 59.992 | 44.000 | 0.00 | 0.00 | 30.84 | 5.73 |
7433 | 7818 | 6.119536 | TCACAATGACATGTATTTAGTCCCC | 58.880 | 40.000 | 0.00 | 0.00 | 30.84 | 4.81 |
7434 | 7819 | 7.624360 | TTCACAATGACATGTATTTAGTCCC | 57.376 | 36.000 | 0.00 | 0.00 | 30.84 | 4.46 |
7435 | 7820 | 9.722056 | GAATTCACAATGACATGTATTTAGTCC | 57.278 | 33.333 | 0.00 | 0.00 | 30.84 | 3.85 |
7436 | 7821 | 9.722056 | GGAATTCACAATGACATGTATTTAGTC | 57.278 | 33.333 | 7.93 | 0.00 | 30.84 | 2.59 |
7437 | 7822 | 9.241919 | TGGAATTCACAATGACATGTATTTAGT | 57.758 | 29.630 | 7.93 | 0.00 | 30.84 | 2.24 |
7442 | 7827 | 9.577222 | TGATATGGAATTCACAATGACATGTAT | 57.423 | 29.630 | 7.93 | 0.00 | 30.84 | 2.29 |
7443 | 7828 | 8.839343 | GTGATATGGAATTCACAATGACATGTA | 58.161 | 33.333 | 7.93 | 0.00 | 41.48 | 2.29 |
7444 | 7829 | 7.558807 | AGTGATATGGAATTCACAATGACATGT | 59.441 | 33.333 | 7.93 | 0.00 | 43.72 | 3.21 |
7445 | 7830 | 7.937649 | AGTGATATGGAATTCACAATGACATG | 58.062 | 34.615 | 7.93 | 0.00 | 43.72 | 3.21 |
7446 | 7831 | 8.529424 | AAGTGATATGGAATTCACAATGACAT | 57.471 | 30.769 | 7.93 | 2.35 | 43.72 | 3.06 |
7447 | 7832 | 7.943079 | AAGTGATATGGAATTCACAATGACA | 57.057 | 32.000 | 7.93 | 0.00 | 43.72 | 3.58 |
7453 | 7838 | 9.571816 | TGCATAATAAGTGATATGGAATTCACA | 57.428 | 29.630 | 7.93 | 3.48 | 43.72 | 3.58 |
7457 | 7842 | 8.896744 | CGGATGCATAATAAGTGATATGGAATT | 58.103 | 33.333 | 0.00 | 0.00 | 34.25 | 2.17 |
7458 | 7843 | 7.500227 | CCGGATGCATAATAAGTGATATGGAAT | 59.500 | 37.037 | 0.00 | 0.00 | 34.25 | 3.01 |
7459 | 7844 | 6.823182 | CCGGATGCATAATAAGTGATATGGAA | 59.177 | 38.462 | 0.00 | 0.00 | 34.25 | 3.53 |
7460 | 7845 | 6.070251 | ACCGGATGCATAATAAGTGATATGGA | 60.070 | 38.462 | 9.46 | 0.00 | 34.90 | 3.41 |
7461 | 7846 | 6.115446 | ACCGGATGCATAATAAGTGATATGG | 58.885 | 40.000 | 9.46 | 0.00 | 31.58 | 2.74 |
7462 | 7847 | 7.615582 | AACCGGATGCATAATAAGTGATATG | 57.384 | 36.000 | 9.46 | 0.00 | 33.58 | 1.78 |
7463 | 7848 | 9.905713 | ATTAACCGGATGCATAATAAGTGATAT | 57.094 | 29.630 | 9.46 | 0.00 | 0.00 | 1.63 |
7464 | 7849 | 9.378551 | GATTAACCGGATGCATAATAAGTGATA | 57.621 | 33.333 | 9.46 | 0.00 | 0.00 | 2.15 |
7465 | 7850 | 7.336931 | GGATTAACCGGATGCATAATAAGTGAT | 59.663 | 37.037 | 9.46 | 0.00 | 0.00 | 3.06 |
7466 | 7851 | 6.653320 | GGATTAACCGGATGCATAATAAGTGA | 59.347 | 38.462 | 9.46 | 0.00 | 0.00 | 3.41 |
7467 | 7852 | 6.655003 | AGGATTAACCGGATGCATAATAAGTG | 59.345 | 38.462 | 9.46 | 0.00 | 44.74 | 3.16 |
7468 | 7853 | 6.779860 | AGGATTAACCGGATGCATAATAAGT | 58.220 | 36.000 | 9.46 | 0.00 | 44.74 | 2.24 |
7469 | 7854 | 7.106239 | AGAGGATTAACCGGATGCATAATAAG | 58.894 | 38.462 | 9.46 | 0.00 | 44.74 | 1.73 |
7470 | 7855 | 7.016153 | AGAGGATTAACCGGATGCATAATAA | 57.984 | 36.000 | 9.46 | 0.00 | 44.74 | 1.40 |
7471 | 7856 | 6.620877 | AGAGGATTAACCGGATGCATAATA | 57.379 | 37.500 | 9.46 | 0.00 | 44.74 | 0.98 |
7472 | 7857 | 5.505181 | AGAGGATTAACCGGATGCATAAT | 57.495 | 39.130 | 9.46 | 4.73 | 44.74 | 1.28 |
7473 | 7858 | 4.974645 | AGAGGATTAACCGGATGCATAA | 57.025 | 40.909 | 9.46 | 0.00 | 44.74 | 1.90 |
7474 | 7859 | 4.466370 | CCTAGAGGATTAACCGGATGCATA | 59.534 | 45.833 | 9.46 | 0.00 | 44.74 | 3.14 |
7475 | 7860 | 3.261897 | CCTAGAGGATTAACCGGATGCAT | 59.738 | 47.826 | 9.46 | 0.00 | 44.74 | 3.96 |
7476 | 7861 | 2.632996 | CCTAGAGGATTAACCGGATGCA | 59.367 | 50.000 | 9.46 | 0.00 | 44.74 | 3.96 |
7477 | 7862 | 2.613223 | GCCTAGAGGATTAACCGGATGC | 60.613 | 54.545 | 9.46 | 0.00 | 44.74 | 3.91 |
7478 | 7863 | 2.028020 | GGCCTAGAGGATTAACCGGATG | 60.028 | 54.545 | 9.46 | 0.00 | 44.74 | 3.51 |
7479 | 7864 | 2.258109 | GGCCTAGAGGATTAACCGGAT | 58.742 | 52.381 | 9.46 | 0.00 | 44.74 | 4.18 |
7480 | 7865 | 1.713297 | GGCCTAGAGGATTAACCGGA | 58.287 | 55.000 | 9.46 | 0.00 | 44.74 | 5.14 |
7481 | 7866 | 0.317479 | CGGCCTAGAGGATTAACCGG | 59.683 | 60.000 | 0.00 | 0.00 | 44.74 | 5.28 |
7482 | 7867 | 0.319641 | GCGGCCTAGAGGATTAACCG | 60.320 | 60.000 | 0.00 | 3.53 | 44.74 | 4.44 |
7483 | 7868 | 0.035036 | GGCGGCCTAGAGGATTAACC | 59.965 | 60.000 | 12.87 | 0.00 | 37.39 | 2.85 |
7484 | 7869 | 0.756903 | TGGCGGCCTAGAGGATTAAC | 59.243 | 55.000 | 21.46 | 0.00 | 37.39 | 2.01 |
7485 | 7870 | 0.756903 | GTGGCGGCCTAGAGGATTAA | 59.243 | 55.000 | 21.46 | 0.00 | 37.39 | 1.40 |
7486 | 7871 | 1.119574 | GGTGGCGGCCTAGAGGATTA | 61.120 | 60.000 | 21.46 | 0.00 | 37.39 | 1.75 |
7487 | 7872 | 2.444256 | GGTGGCGGCCTAGAGGATT | 61.444 | 63.158 | 21.46 | 0.00 | 37.39 | 3.01 |
7488 | 7873 | 2.844839 | GGTGGCGGCCTAGAGGAT | 60.845 | 66.667 | 21.46 | 0.00 | 37.39 | 3.24 |
7489 | 7874 | 4.392166 | TGGTGGCGGCCTAGAGGA | 62.392 | 66.667 | 21.46 | 0.00 | 37.39 | 3.71 |
7490 | 7875 | 4.162690 | GTGGTGGCGGCCTAGAGG | 62.163 | 72.222 | 21.46 | 0.00 | 38.53 | 3.69 |
7491 | 7876 | 4.162690 | GGTGGTGGCGGCCTAGAG | 62.163 | 72.222 | 21.46 | 0.00 | 0.00 | 2.43 |
7493 | 7878 | 4.778143 | GTGGTGGTGGCGGCCTAG | 62.778 | 72.222 | 21.46 | 0.00 | 0.00 | 3.02 |
7500 | 7885 | 4.722700 | AGGCATCGTGGTGGTGGC | 62.723 | 66.667 | 0.00 | 0.00 | 38.56 | 5.01 |
7501 | 7886 | 2.034066 | AAGGCATCGTGGTGGTGG | 59.966 | 61.111 | 0.00 | 0.00 | 0.00 | 4.61 |
7502 | 7887 | 2.981560 | GCAAGGCATCGTGGTGGTG | 61.982 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
7503 | 7888 | 2.672996 | GCAAGGCATCGTGGTGGT | 60.673 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
7504 | 7889 | 2.360350 | AGCAAGGCATCGTGGTGG | 60.360 | 61.111 | 0.00 | 0.00 | 32.30 | 4.61 |
7505 | 7890 | 2.872557 | CAGCAAGGCATCGTGGTG | 59.127 | 61.111 | 0.00 | 0.00 | 42.34 | 4.17 |
7506 | 7891 | 0.036164 | TAACAGCAAGGCATCGTGGT | 59.964 | 50.000 | 0.00 | 0.00 | 33.65 | 4.16 |
7507 | 7892 | 1.164411 | TTAACAGCAAGGCATCGTGG | 58.836 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
7508 | 7893 | 3.373748 | TGTATTAACAGCAAGGCATCGTG | 59.626 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
7509 | 7894 | 3.605634 | TGTATTAACAGCAAGGCATCGT | 58.394 | 40.909 | 0.00 | 0.00 | 0.00 | 3.73 |
7510 | 7895 | 4.201208 | CTGTATTAACAGCAAGGCATCG | 57.799 | 45.455 | 0.00 | 0.00 | 46.28 | 3.84 |
7521 | 7906 | 7.306213 | CACTCTTCGTTCTCTCTGTATTAACA | 58.694 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
7522 | 7907 | 7.728580 | CACTCTTCGTTCTCTCTGTATTAAC | 57.271 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.