Multiple sequence alignment - TraesCS2B01G372800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G372800 chr2B 100.000 5136 0 0 1 5136 531143877 531138742 0.000000e+00 9485.0
1 TraesCS2B01G372800 chr2B 100.000 2031 0 0 5509 7539 531138369 531136339 0.000000e+00 3751.0
2 TraesCS2B01G372800 chr2B 85.542 83 9 2 5727 5809 531137920 531137999 4.850000e-12 84.2
3 TraesCS2B01G372800 chr2B 85.542 83 9 2 5879 5958 531138069 531138151 4.850000e-12 84.2
4 TraesCS2B01G372800 chr2D 91.145 3817 215 74 1 3755 451006122 451002367 0.000000e+00 5062.0
5 TraesCS2B01G372800 chr2D 96.771 1084 33 2 4053 5136 451002368 451001287 0.000000e+00 1807.0
6 TraesCS2B01G372800 chr2D 93.942 1106 40 12 5509 6612 451001260 451000180 0.000000e+00 1646.0
7 TraesCS2B01G372800 chr2D 93.114 944 40 12 6612 7539 451000127 450999193 0.000000e+00 1360.0
8 TraesCS2B01G372800 chr2D 93.016 315 18 1 3753 4063 102542778 102542464 2.480000e-124 457.0
9 TraesCS2B01G372800 chr2D 93.485 307 16 1 3753 4055 386133871 386133565 3.210000e-123 453.0
10 TraesCS2B01G372800 chr2D 93.485 307 16 1 3752 4054 512462865 512462559 3.210000e-123 453.0
11 TraesCS2B01G372800 chr2D 83.226 155 11 7 5649 5790 451000726 451000878 2.210000e-25 128.0
12 TraesCS2B01G372800 chr2A 94.825 2319 96 14 1459 3755 598610416 598612732 0.000000e+00 3596.0
13 TraesCS2B01G372800 chr2A 95.756 1084 45 1 4053 5136 598612731 598613813 0.000000e+00 1746.0
14 TraesCS2B01G372800 chr2A 94.485 1106 42 9 5509 6612 598613839 598614927 0.000000e+00 1687.0
15 TraesCS2B01G372800 chr2A 85.219 866 49 35 612 1462 598609582 598610383 0.000000e+00 817.0
16 TraesCS2B01G372800 chr2A 92.412 514 32 6 7027 7539 598615466 598615973 0.000000e+00 726.0
17 TraesCS2B01G372800 chr2A 85.366 451 31 16 6612 7029 598614980 598615428 1.160000e-117 435.0
18 TraesCS2B01G372800 chr2A 80.571 175 13 12 5649 5809 598614376 598614209 1.720000e-21 115.0
19 TraesCS2B01G372800 chr3D 94.603 315 12 2 3754 4064 193624095 193623782 4.090000e-132 483.0
20 TraesCS2B01G372800 chr3D 88.950 181 14 2 7226 7401 517004129 517004308 1.270000e-52 219.0
21 TraesCS2B01G372800 chr4B 93.930 313 15 1 3754 4062 672301272 672300960 3.180000e-128 470.0
22 TraesCS2B01G372800 chr4B 93.651 315 14 3 3747 4055 63293844 63293530 4.120000e-127 466.0
23 TraesCS2B01G372800 chr5B 93.930 313 14 2 3754 4062 681629467 681629778 1.150000e-127 468.0
24 TraesCS2B01G372800 chr5B 94.118 306 14 1 3753 4054 382381654 382381349 5.330000e-126 462.0
25 TraesCS2B01G372800 chr5D 94.389 303 13 1 3756 4054 276676251 276676553 5.330000e-126 462.0
26 TraesCS2B01G372800 chr3B 89.674 184 10 6 7361 7539 680237642 680237463 7.610000e-55 226.0
27 TraesCS2B01G372800 chr3B 88.489 139 14 2 7228 7366 680238893 680238757 4.680000e-37 167.0
28 TraesCS2B01G372800 chr7A 91.111 45 2 2 617 659 26762627 26762583 8.170000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G372800 chr2B 531136339 531143877 7538 True 6618.000000 9485 100.000000 1 7539 2 chr2B.!!$R1 7538
1 TraesCS2B01G372800 chr2D 450999193 451006122 6929 True 2468.750000 5062 93.743000 1 7539 4 chr2D.!!$R4 7538
2 TraesCS2B01G372800 chr2A 598609582 598615973 6391 False 1501.166667 3596 91.343833 612 7539 6 chr2A.!!$F1 6927

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 96 0.970640 ACGTAGGCACACATACACCA 59.029 50.000 0.00 0.00 0.00 4.17 F
952 989 1.042559 GTGGGCTCTCTCTCCCTCTG 61.043 65.000 0.00 0.00 43.04 3.35 F
2312 2405 0.235926 GCGCTTTGTTCAGAGACCAC 59.764 55.000 0.00 0.00 0.00 4.16 F
2734 2835 1.127951 GGACTCAACCAAATGCGTACG 59.872 52.381 11.84 11.84 0.00 3.67 F
3783 3889 0.032615 TTCCCACAAGGCCACAAACT 60.033 50.000 5.01 0.00 34.51 2.66 F
3832 3938 0.102844 TGGCTGCTTTGCAAGTCAAC 59.897 50.000 0.00 0.00 38.41 3.18 F
3879 3985 0.171007 ATACGCCACAAGCATGCAAC 59.829 50.000 21.98 1.01 44.04 4.17 F
3991 4097 0.250124 TGCCTCGGTTACTGTTGGTG 60.250 55.000 7.50 0.00 0.00 4.17 F
3996 4102 0.536460 CGGTTACTGTTGGTGGCCTT 60.536 55.000 3.32 0.00 0.00 4.35 F
4987 5094 0.886563 ATGCTTCTCAAGTTGCAGCC 59.113 50.000 15.07 0.00 38.87 4.85 F
5687 5794 2.169352 CAGCTGGCTGTTAGATGTACCT 59.831 50.000 13.76 0.00 39.10 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1216 1259 1.544246 GCAAACTAGTGCGGGGAAAAT 59.456 47.619 0.00 0.00 34.21 1.82 R
2734 2835 0.034337 TGGTGCACGAACTTACTCCC 59.966 55.000 11.45 0.00 0.00 4.30 R
3764 3870 0.032615 AGTTTGTGGCCTTGTGGGAA 60.033 50.000 3.32 0.00 37.23 3.97 R
3860 3966 0.171007 GTTGCATGCTTGTGGCGTAT 59.829 50.000 20.33 0.00 45.43 3.06 R
4713 4820 0.539986 TAGAAACATCCCCACCTCGC 59.460 55.000 0.00 0.00 0.00 5.03 R
5624 5731 1.003331 ACACATAAAACACACGTGCGG 60.003 47.619 17.22 11.07 0.00 5.69 R
5842 5949 3.492337 TGTTCAGTGAACATTAACCCCC 58.508 45.455 30.31 5.35 45.88 5.40 R
5987 6095 2.027929 CGGTGTATCCAGGGTGTGTAAA 60.028 50.000 0.00 0.00 35.57 2.01 R
6021 6130 1.099879 CCAGCTGGCTGTTAGATGGC 61.100 60.000 22.33 0.00 43.81 4.40 R
6066 6175 0.036483 TCACATGCGCAGGTACACAT 60.036 50.000 28.77 0.00 0.00 3.21 R
6726 6890 0.253207 AACTCTAGGGTGGGAAGGGG 60.253 60.000 0.00 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 31 2.741092 GGGAGCGGTTGTGTCTCA 59.259 61.111 0.00 0.00 0.00 3.27
61 63 4.320023 ACACACAAGCACGTATTAATGGA 58.680 39.130 0.00 0.00 0.00 3.41
63 65 3.687698 ACACAAGCACGTATTAATGGACC 59.312 43.478 0.00 0.00 0.00 4.46
66 68 2.817901 AGCACGTATTAATGGACCGAC 58.182 47.619 0.00 0.00 0.00 4.79
76 78 2.930826 ATGGACCGACCCATAATCAC 57.069 50.000 6.73 0.00 44.66 3.06
94 96 0.970640 ACGTAGGCACACATACACCA 59.029 50.000 0.00 0.00 0.00 4.17
95 97 1.345089 ACGTAGGCACACATACACCAA 59.655 47.619 0.00 0.00 0.00 3.67
105 107 5.293079 GCACACATACACCAATTTTTGTTGT 59.707 36.000 0.00 0.00 39.69 3.32
192 202 8.770828 TGTTTAAAACACCGTGAATTTGAAAAA 58.229 25.926 5.28 0.00 36.25 1.94
201 211 6.928492 ACCGTGAATTTGAAAAATGCTAATGT 59.072 30.769 0.00 0.00 0.00 2.71
285 302 5.005094 TCTGACAAATGTTCATGCATCTCA 58.995 37.500 0.00 0.00 0.00 3.27
492 514 9.495572 AAAAAGTTTCAGTATGTGTTGGAAAAA 57.504 25.926 0.00 0.00 37.40 1.94
679 707 7.548196 AAAACATGTTTCCGATGTATACGAT 57.452 32.000 23.47 0.58 32.74 3.73
684 712 9.268268 ACATGTTTCCGATGTATACGATAAATT 57.732 29.630 0.00 0.00 32.12 1.82
779 814 9.165014 GTGAAAGAAACAAAGAAAACCAAAAAC 57.835 29.630 0.00 0.00 0.00 2.43
846 882 6.146510 ACCAAACAAAACCGAAAGAGAAAAAC 59.853 34.615 0.00 0.00 0.00 2.43
847 883 6.146347 CCAAACAAAACCGAAAGAGAAAAACA 59.854 34.615 0.00 0.00 0.00 2.83
885 922 1.367840 GAGCTACAGTATGGGCCGG 59.632 63.158 0.00 0.00 43.62 6.13
901 938 2.663196 GGTCCACTAGCCTTGCGT 59.337 61.111 0.00 0.00 0.00 5.24
952 989 1.042559 GTGGGCTCTCTCTCCCTCTG 61.043 65.000 0.00 0.00 43.04 3.35
1290 1334 4.507756 GGTCTTGTTTGCACAAATTTCTCC 59.492 41.667 0.00 0.00 42.53 3.71
1333 1377 8.514594 TGGTAATTTCATCTCATTTCTTGTGAC 58.485 33.333 0.00 0.00 31.07 3.67
1745 1834 2.845363 CTGGCCAGCCATTTTCTTTT 57.155 45.000 22.33 0.00 46.15 2.27
1753 1842 5.413523 GCCAGCCATTTTCTTTTGATGAAAT 59.586 36.000 0.00 0.00 34.04 2.17
1785 1874 3.517602 TCAGTGTGTATTCATGGTACGC 58.482 45.455 12.78 12.78 34.12 4.42
1861 1950 0.534427 GGGGTTCTAATGGCTACGGC 60.534 60.000 0.00 0.00 37.82 5.68
1884 1973 2.585330 TCATGCTTGTGTCACACCAAT 58.415 42.857 4.80 0.00 32.73 3.16
2040 2131 4.479158 AGCTGGAATTTGGTGGAAACTAA 58.521 39.130 0.00 0.00 0.00 2.24
2074 2165 1.039856 CTTGGTGGGGGTTTTCTGTG 58.960 55.000 0.00 0.00 0.00 3.66
2179 2272 2.981859 ACTGTTTGTGGACGTCTCTT 57.018 45.000 16.46 0.00 0.00 2.85
2214 2307 4.273148 AGTGTCTAAACGGAGCAATCTT 57.727 40.909 0.00 0.00 0.00 2.40
2260 2353 7.944000 TGATATGGCTTAATTAGGATTCTGCAA 59.056 33.333 0.00 0.00 0.00 4.08
2309 2402 5.285651 AGATATAGCGCTTTGTTCAGAGAC 58.714 41.667 18.68 0.00 0.00 3.36
2312 2405 0.235926 GCGCTTTGTTCAGAGACCAC 59.764 55.000 0.00 0.00 0.00 4.16
2328 2421 8.486210 TCAGAGACCACTTTTACATATATGCTT 58.514 33.333 12.79 0.00 0.00 3.91
2485 2578 5.411361 TGTGCAATAGGAGTGATACAACAAC 59.589 40.000 0.00 0.00 0.00 3.32
2517 2611 8.926092 ATAGCTTATTCTTTGGTCCTTATTCC 57.074 34.615 0.00 0.00 0.00 3.01
2579 2678 3.113260 ACTCTGCTGTAGTGAAACACC 57.887 47.619 1.88 0.00 41.43 4.16
2582 2681 2.159014 TCTGCTGTAGTGAAACACCGTT 60.159 45.455 0.00 0.00 41.43 4.44
2583 2682 1.937223 TGCTGTAGTGAAACACCGTTG 59.063 47.619 0.00 0.00 41.43 4.10
2731 2832 1.523758 GAGGACTCAACCAAATGCGT 58.476 50.000 0.00 0.00 0.00 5.24
2734 2835 1.127951 GGACTCAACCAAATGCGTACG 59.872 52.381 11.84 11.84 0.00 3.67
2765 2866 2.685897 TCGTGCACCAAAACTTAGCTTT 59.314 40.909 12.15 0.00 0.00 3.51
3137 3241 8.815141 TGTCCAATTTTGTTCATGTTTATCTG 57.185 30.769 0.00 0.00 0.00 2.90
3159 3263 5.092105 TGAAATTCAATTCGCACCAATACG 58.908 37.500 0.00 0.00 31.80 3.06
3382 3486 4.078639 ACTCCATTAGCTACCTCAATGC 57.921 45.455 0.00 0.00 0.00 3.56
3464 3570 9.765295 TTAAACTAGAGATTTAGTGGACTACCT 57.235 33.333 0.00 0.00 34.24 3.08
3471 3577 5.710567 AGATTTAGTGGACTACCTTTTTGCC 59.289 40.000 0.00 0.00 37.04 4.52
3557 3663 5.012664 TGGTATGGAGAGTTGAAAGTGCTAA 59.987 40.000 0.00 0.00 0.00 3.09
3559 3665 3.390135 TGGAGAGTTGAAAGTGCTAACG 58.610 45.455 0.00 0.00 0.00 3.18
3643 3749 7.728847 TGCAAGCAATATGACGTATAGAAAT 57.271 32.000 0.00 0.00 0.00 2.17
3651 3757 9.249457 CAATATGACGTATAGAAATATCGCCAT 57.751 33.333 0.00 0.00 0.00 4.40
3653 3759 6.944557 TGACGTATAGAAATATCGCCATTG 57.055 37.500 0.00 0.00 0.00 2.82
3696 3802 1.956477 GGCTGTTCTTTGACATGGTGT 59.044 47.619 0.00 0.00 0.00 4.16
3758 3864 8.726988 TGAGCAACACTTACATAAAAATACTCC 58.273 33.333 0.00 0.00 0.00 3.85
3759 3865 8.051901 AGCAACACTTACATAAAAATACTCCC 57.948 34.615 0.00 0.00 0.00 4.30
3760 3866 7.888546 AGCAACACTTACATAAAAATACTCCCT 59.111 33.333 0.00 0.00 0.00 4.20
3761 3867 8.182227 GCAACACTTACATAAAAATACTCCCTC 58.818 37.037 0.00 0.00 0.00 4.30
3762 3868 8.674607 CAACACTTACATAAAAATACTCCCTCC 58.325 37.037 0.00 0.00 0.00 4.30
3763 3869 7.924541 ACACTTACATAAAAATACTCCCTCCA 58.075 34.615 0.00 0.00 0.00 3.86
3764 3870 8.557450 ACACTTACATAAAAATACTCCCTCCAT 58.443 33.333 0.00 0.00 0.00 3.41
3765 3871 9.408648 CACTTACATAAAAATACTCCCTCCATT 57.591 33.333 0.00 0.00 0.00 3.16
3766 3872 9.628500 ACTTACATAAAAATACTCCCTCCATTC 57.372 33.333 0.00 0.00 0.00 2.67
3767 3873 8.990163 TTACATAAAAATACTCCCTCCATTCC 57.010 34.615 0.00 0.00 0.00 3.01
3768 3874 6.373759 ACATAAAAATACTCCCTCCATTCCC 58.626 40.000 0.00 0.00 0.00 3.97
3769 3875 4.965283 AAAAATACTCCCTCCATTCCCA 57.035 40.909 0.00 0.00 0.00 4.37
3770 3876 3.953542 AAATACTCCCTCCATTCCCAC 57.046 47.619 0.00 0.00 0.00 4.61
3771 3877 2.587060 ATACTCCCTCCATTCCCACA 57.413 50.000 0.00 0.00 0.00 4.17
3772 3878 2.352561 TACTCCCTCCATTCCCACAA 57.647 50.000 0.00 0.00 0.00 3.33
3773 3879 0.995024 ACTCCCTCCATTCCCACAAG 59.005 55.000 0.00 0.00 0.00 3.16
3774 3880 0.257039 CTCCCTCCATTCCCACAAGG 59.743 60.000 0.00 0.00 0.00 3.61
3775 3881 1.380380 CCCTCCATTCCCACAAGGC 60.380 63.158 0.00 0.00 34.51 4.35
3776 3882 1.380380 CCTCCATTCCCACAAGGCC 60.380 63.158 0.00 0.00 34.51 5.19
3777 3883 1.383799 CTCCATTCCCACAAGGCCA 59.616 57.895 5.01 0.00 34.51 5.36
3778 3884 0.967380 CTCCATTCCCACAAGGCCAC 60.967 60.000 5.01 0.00 34.51 5.01
3779 3885 1.228831 CCATTCCCACAAGGCCACA 60.229 57.895 5.01 0.00 34.51 4.17
3780 3886 0.831288 CCATTCCCACAAGGCCACAA 60.831 55.000 5.01 0.00 34.51 3.33
3781 3887 1.047002 CATTCCCACAAGGCCACAAA 58.953 50.000 5.01 0.00 34.51 2.83
3782 3888 1.047801 ATTCCCACAAGGCCACAAAC 58.952 50.000 5.01 0.00 34.51 2.93
3783 3889 0.032615 TTCCCACAAGGCCACAAACT 60.033 50.000 5.01 0.00 34.51 2.66
3784 3890 0.467290 TCCCACAAGGCCACAAACTC 60.467 55.000 5.01 0.00 34.51 3.01
3785 3891 0.754957 CCCACAAGGCCACAAACTCA 60.755 55.000 5.01 0.00 0.00 3.41
3786 3892 0.670162 CCACAAGGCCACAAACTCAG 59.330 55.000 5.01 0.00 0.00 3.35
3787 3893 1.679139 CACAAGGCCACAAACTCAGA 58.321 50.000 5.01 0.00 0.00 3.27
3788 3894 2.233271 CACAAGGCCACAAACTCAGAT 58.767 47.619 5.01 0.00 0.00 2.90
3789 3895 2.624838 CACAAGGCCACAAACTCAGATT 59.375 45.455 5.01 0.00 0.00 2.40
3790 3896 3.820467 CACAAGGCCACAAACTCAGATTA 59.180 43.478 5.01 0.00 0.00 1.75
3791 3897 3.821033 ACAAGGCCACAAACTCAGATTAC 59.179 43.478 5.01 0.00 0.00 1.89
3792 3898 3.788227 AGGCCACAAACTCAGATTACA 57.212 42.857 5.01 0.00 0.00 2.41
3793 3899 3.679389 AGGCCACAAACTCAGATTACAG 58.321 45.455 5.01 0.00 0.00 2.74
3794 3900 2.749621 GGCCACAAACTCAGATTACAGG 59.250 50.000 0.00 0.00 0.00 4.00
3795 3901 3.412386 GCCACAAACTCAGATTACAGGT 58.588 45.455 0.00 0.00 0.00 4.00
3796 3902 4.564821 GGCCACAAACTCAGATTACAGGTA 60.565 45.833 0.00 0.00 0.00 3.08
3797 3903 4.392138 GCCACAAACTCAGATTACAGGTAC 59.608 45.833 0.00 0.00 0.00 3.34
3798 3904 4.935808 CCACAAACTCAGATTACAGGTACC 59.064 45.833 2.73 2.73 0.00 3.34
3799 3905 5.512404 CCACAAACTCAGATTACAGGTACCA 60.512 44.000 15.94 0.00 0.00 3.25
3800 3906 5.995282 CACAAACTCAGATTACAGGTACCAA 59.005 40.000 15.94 0.00 0.00 3.67
3801 3907 6.147821 CACAAACTCAGATTACAGGTACCAAG 59.852 42.308 15.94 8.83 0.00 3.61
3802 3908 6.042781 ACAAACTCAGATTACAGGTACCAAGA 59.957 38.462 15.94 0.00 0.00 3.02
3803 3909 6.875972 AACTCAGATTACAGGTACCAAGAT 57.124 37.500 15.94 2.12 0.00 2.40
3804 3910 7.973048 AACTCAGATTACAGGTACCAAGATA 57.027 36.000 15.94 0.00 0.00 1.98
3805 3911 7.973048 ACTCAGATTACAGGTACCAAGATAA 57.027 36.000 15.94 7.12 0.00 1.75
3806 3912 8.375493 ACTCAGATTACAGGTACCAAGATAAA 57.625 34.615 15.94 4.69 0.00 1.40
3807 3913 8.822805 ACTCAGATTACAGGTACCAAGATAAAA 58.177 33.333 15.94 0.00 0.00 1.52
3808 3914 9.838339 CTCAGATTACAGGTACCAAGATAAAAT 57.162 33.333 15.94 3.72 0.00 1.82
3816 3922 8.474831 ACAGGTACCAAGATAAAATTTAATGGC 58.525 33.333 15.94 2.33 0.00 4.40
3817 3923 8.695456 CAGGTACCAAGATAAAATTTAATGGCT 58.305 33.333 15.94 3.59 0.00 4.75
3818 3924 8.695456 AGGTACCAAGATAAAATTTAATGGCTG 58.305 33.333 15.94 0.00 0.00 4.85
3819 3925 7.438160 GGTACCAAGATAAAATTTAATGGCTGC 59.562 37.037 7.15 0.00 0.00 5.25
3820 3926 7.186570 ACCAAGATAAAATTTAATGGCTGCT 57.813 32.000 12.50 0.00 0.00 4.24
3821 3927 7.623630 ACCAAGATAAAATTTAATGGCTGCTT 58.376 30.769 12.50 0.00 0.00 3.91
3822 3928 8.102676 ACCAAGATAAAATTTAATGGCTGCTTT 58.897 29.630 12.50 0.00 0.00 3.51
3823 3929 8.392612 CCAAGATAAAATTTAATGGCTGCTTTG 58.607 33.333 0.00 0.00 0.00 2.77
3824 3930 7.543947 AGATAAAATTTAATGGCTGCTTTGC 57.456 32.000 0.00 0.00 0.00 3.68
3825 3931 7.104939 AGATAAAATTTAATGGCTGCTTTGCA 58.895 30.769 0.00 0.00 36.92 4.08
3826 3932 7.607223 AGATAAAATTTAATGGCTGCTTTGCAA 59.393 29.630 0.00 0.00 38.41 4.08
3827 3933 5.616488 AAATTTAATGGCTGCTTTGCAAG 57.384 34.783 0.00 0.00 38.41 4.01
3828 3934 3.749665 TTTAATGGCTGCTTTGCAAGT 57.250 38.095 0.00 0.00 38.41 3.16
3829 3935 3.302365 TTAATGGCTGCTTTGCAAGTC 57.698 42.857 0.00 0.00 38.41 3.01
3830 3936 1.042229 AATGGCTGCTTTGCAAGTCA 58.958 45.000 0.00 0.00 38.41 3.41
3831 3937 1.042229 ATGGCTGCTTTGCAAGTCAA 58.958 45.000 0.00 0.00 38.41 3.18
3832 3938 0.102844 TGGCTGCTTTGCAAGTCAAC 59.897 50.000 0.00 0.00 38.41 3.18
3833 3939 0.386838 GGCTGCTTTGCAAGTCAACT 59.613 50.000 0.00 0.00 38.41 3.16
3834 3940 1.202452 GGCTGCTTTGCAAGTCAACTT 60.202 47.619 0.00 0.00 38.41 2.66
3835 3941 2.543641 GCTGCTTTGCAAGTCAACTTT 58.456 42.857 0.00 0.00 38.41 2.66
3836 3942 2.931969 GCTGCTTTGCAAGTCAACTTTT 59.068 40.909 0.00 0.00 38.41 2.27
3837 3943 3.000623 GCTGCTTTGCAAGTCAACTTTTC 59.999 43.478 0.00 0.00 38.41 2.29
3838 3944 4.427312 CTGCTTTGCAAGTCAACTTTTCT 58.573 39.130 0.00 0.00 38.41 2.52
3839 3945 4.819769 TGCTTTGCAAGTCAACTTTTCTT 58.180 34.783 0.00 0.00 34.76 2.52
3840 3946 5.237048 TGCTTTGCAAGTCAACTTTTCTTT 58.763 33.333 0.00 0.00 34.76 2.52
3841 3947 5.700373 TGCTTTGCAAGTCAACTTTTCTTTT 59.300 32.000 0.00 0.00 34.76 2.27
3842 3948 6.128580 TGCTTTGCAAGTCAACTTTTCTTTTC 60.129 34.615 0.00 0.00 34.76 2.29
3843 3949 6.388259 TTTGCAAGTCAACTTTTCTTTTCG 57.612 33.333 0.00 0.00 33.73 3.46
3844 3950 5.054390 TGCAAGTCAACTTTTCTTTTCGT 57.946 34.783 0.00 0.00 33.11 3.85
3845 3951 5.465935 TGCAAGTCAACTTTTCTTTTCGTT 58.534 33.333 0.00 0.00 33.11 3.85
3846 3952 6.613233 TGCAAGTCAACTTTTCTTTTCGTTA 58.387 32.000 0.00 0.00 33.11 3.18
3847 3953 7.085116 TGCAAGTCAACTTTTCTTTTCGTTAA 58.915 30.769 0.00 0.00 33.11 2.01
3848 3954 7.757624 TGCAAGTCAACTTTTCTTTTCGTTAAT 59.242 29.630 0.00 0.00 33.11 1.40
3849 3955 8.259872 GCAAGTCAACTTTTCTTTTCGTTAATC 58.740 33.333 0.00 0.00 33.11 1.75
3850 3956 8.461398 CAAGTCAACTTTTCTTTTCGTTAATCG 58.539 33.333 0.00 0.00 35.96 3.34
3851 3957 7.130269 AGTCAACTTTTCTTTTCGTTAATCGG 58.870 34.615 0.00 0.00 40.32 4.18
3852 3958 6.358822 GTCAACTTTTCTTTTCGTTAATCGGG 59.641 38.462 0.00 0.00 40.32 5.14
3853 3959 6.260493 TCAACTTTTCTTTTCGTTAATCGGGA 59.740 34.615 0.00 0.00 40.32 5.14
3854 3960 6.812879 ACTTTTCTTTTCGTTAATCGGGAT 57.187 33.333 0.00 0.00 40.32 3.85
3855 3961 6.839033 ACTTTTCTTTTCGTTAATCGGGATC 58.161 36.000 0.00 0.00 40.32 3.36
3856 3962 6.428771 ACTTTTCTTTTCGTTAATCGGGATCA 59.571 34.615 0.00 0.00 40.32 2.92
3857 3963 6.995511 TTTCTTTTCGTTAATCGGGATCAT 57.004 33.333 0.00 0.00 40.32 2.45
3858 3964 6.995511 TTCTTTTCGTTAATCGGGATCATT 57.004 33.333 0.00 0.00 40.32 2.57
3859 3965 8.495361 TTTCTTTTCGTTAATCGGGATCATTA 57.505 30.769 0.00 0.00 40.32 1.90
3860 3966 8.495361 TTCTTTTCGTTAATCGGGATCATTAA 57.505 30.769 0.00 0.00 40.32 1.40
3861 3967 8.671384 TCTTTTCGTTAATCGGGATCATTAAT 57.329 30.769 0.00 0.00 40.32 1.40
3862 3968 9.767228 TCTTTTCGTTAATCGGGATCATTAATA 57.233 29.630 0.00 0.00 40.32 0.98
3863 3969 9.807386 CTTTTCGTTAATCGGGATCATTAATAC 57.193 33.333 0.00 0.00 40.32 1.89
3864 3970 7.571089 TTCGTTAATCGGGATCATTAATACG 57.429 36.000 0.00 0.00 40.32 3.06
3865 3971 5.574055 TCGTTAATCGGGATCATTAATACGC 59.426 40.000 0.00 0.00 40.32 4.42
3866 3972 5.220340 CGTTAATCGGGATCATTAATACGCC 60.220 44.000 0.00 0.00 35.71 5.68
3867 3973 3.973206 ATCGGGATCATTAATACGCCA 57.027 42.857 0.00 0.00 0.00 5.69
3868 3974 3.034721 TCGGGATCATTAATACGCCAC 57.965 47.619 0.00 0.00 0.00 5.01
3869 3975 2.365941 TCGGGATCATTAATACGCCACA 59.634 45.455 0.00 0.00 0.00 4.17
3870 3976 3.135225 CGGGATCATTAATACGCCACAA 58.865 45.455 0.00 0.00 0.00 3.33
3871 3977 3.186409 CGGGATCATTAATACGCCACAAG 59.814 47.826 0.00 0.00 0.00 3.16
3872 3978 3.058224 GGGATCATTAATACGCCACAAGC 60.058 47.826 0.00 0.00 38.52 4.01
3873 3979 3.563808 GGATCATTAATACGCCACAAGCA 59.436 43.478 0.00 0.00 44.04 3.91
3874 3980 4.216257 GGATCATTAATACGCCACAAGCAT 59.784 41.667 0.00 0.00 44.04 3.79
3875 3981 4.550577 TCATTAATACGCCACAAGCATG 57.449 40.909 0.00 0.00 44.04 4.06
3876 3982 2.842208 TTAATACGCCACAAGCATGC 57.158 45.000 10.51 10.51 44.04 4.06
3877 3983 1.743996 TAATACGCCACAAGCATGCA 58.256 45.000 21.98 0.00 44.04 3.96
3878 3984 0.887247 AATACGCCACAAGCATGCAA 59.113 45.000 21.98 0.00 44.04 4.08
3879 3985 0.171007 ATACGCCACAAGCATGCAAC 59.829 50.000 21.98 1.01 44.04 4.17
3880 3986 2.181372 TACGCCACAAGCATGCAACG 62.181 55.000 21.98 15.26 44.04 4.10
3881 3987 2.644418 GCCACAAGCATGCAACGA 59.356 55.556 21.98 0.00 42.97 3.85
3882 3988 1.007502 GCCACAAGCATGCAACGAA 60.008 52.632 21.98 0.00 42.97 3.85
3883 3989 0.388907 GCCACAAGCATGCAACGAAT 60.389 50.000 21.98 0.00 42.97 3.34
3884 3990 1.342555 CCACAAGCATGCAACGAATG 58.657 50.000 21.98 10.75 0.00 2.67
3885 3991 1.068402 CCACAAGCATGCAACGAATGA 60.068 47.619 21.98 0.00 0.00 2.57
3886 3992 2.607526 CCACAAGCATGCAACGAATGAA 60.608 45.455 21.98 0.00 0.00 2.57
3887 3993 3.247442 CACAAGCATGCAACGAATGAAT 58.753 40.909 21.98 0.00 0.00 2.57
3888 3994 3.060230 CACAAGCATGCAACGAATGAATG 59.940 43.478 21.98 8.89 46.55 2.67
3889 3995 2.572191 AGCATGCAACGAATGAATGG 57.428 45.000 21.98 0.13 44.30 3.16
3890 3996 1.135527 AGCATGCAACGAATGAATGGG 59.864 47.619 21.98 0.00 44.30 4.00
3891 3997 1.134753 GCATGCAACGAATGAATGGGA 59.865 47.619 14.21 0.00 44.30 4.37
3892 3998 2.417107 GCATGCAACGAATGAATGGGAA 60.417 45.455 14.21 0.00 44.30 3.97
3893 3999 3.441163 CATGCAACGAATGAATGGGAAG 58.559 45.455 0.00 0.00 40.91 3.46
3894 4000 1.818060 TGCAACGAATGAATGGGAAGG 59.182 47.619 0.00 0.00 0.00 3.46
3895 4001 2.091541 GCAACGAATGAATGGGAAGGA 58.908 47.619 0.00 0.00 0.00 3.36
3896 4002 2.491693 GCAACGAATGAATGGGAAGGAA 59.508 45.455 0.00 0.00 0.00 3.36
3897 4003 3.428045 GCAACGAATGAATGGGAAGGAAG 60.428 47.826 0.00 0.00 0.00 3.46
3898 4004 3.721087 ACGAATGAATGGGAAGGAAGT 57.279 42.857 0.00 0.00 0.00 3.01
3899 4005 4.837093 ACGAATGAATGGGAAGGAAGTA 57.163 40.909 0.00 0.00 0.00 2.24
3900 4006 4.770795 ACGAATGAATGGGAAGGAAGTAG 58.229 43.478 0.00 0.00 0.00 2.57
3901 4007 3.561725 CGAATGAATGGGAAGGAAGTAGC 59.438 47.826 0.00 0.00 0.00 3.58
3902 4008 4.684485 CGAATGAATGGGAAGGAAGTAGCT 60.684 45.833 0.00 0.00 0.00 3.32
3903 4009 3.634397 TGAATGGGAAGGAAGTAGCTG 57.366 47.619 0.00 0.00 0.00 4.24
3904 4010 3.181329 TGAATGGGAAGGAAGTAGCTGA 58.819 45.455 0.00 0.00 0.00 4.26
3905 4011 3.198635 TGAATGGGAAGGAAGTAGCTGAG 59.801 47.826 0.00 0.00 0.00 3.35
3906 4012 2.327325 TGGGAAGGAAGTAGCTGAGT 57.673 50.000 0.00 0.00 0.00 3.41
3907 4013 1.902508 TGGGAAGGAAGTAGCTGAGTG 59.097 52.381 0.00 0.00 0.00 3.51
3908 4014 1.903183 GGGAAGGAAGTAGCTGAGTGT 59.097 52.381 0.00 0.00 0.00 3.55
3909 4015 2.093921 GGGAAGGAAGTAGCTGAGTGTC 60.094 54.545 0.00 0.00 0.00 3.67
3910 4016 2.563179 GGAAGGAAGTAGCTGAGTGTCA 59.437 50.000 0.00 0.00 0.00 3.58
3911 4017 3.196685 GGAAGGAAGTAGCTGAGTGTCAT 59.803 47.826 0.00 0.00 0.00 3.06
3912 4018 4.323104 GGAAGGAAGTAGCTGAGTGTCATT 60.323 45.833 0.00 0.00 0.00 2.57
3913 4019 5.105310 GGAAGGAAGTAGCTGAGTGTCATTA 60.105 44.000 0.00 0.00 0.00 1.90
3914 4020 6.407525 GGAAGGAAGTAGCTGAGTGTCATTAT 60.408 42.308 0.00 0.00 0.00 1.28
3915 4021 5.911752 AGGAAGTAGCTGAGTGTCATTATG 58.088 41.667 0.00 0.00 0.00 1.90
3916 4022 5.658634 AGGAAGTAGCTGAGTGTCATTATGA 59.341 40.000 0.00 0.00 0.00 2.15
3932 4038 8.370493 GTCATTATGACTACATGCATGTAACT 57.630 34.615 33.05 23.38 43.73 2.24
3933 4039 9.476202 GTCATTATGACTACATGCATGTAACTA 57.524 33.333 33.05 23.37 43.73 2.24
3945 4051 9.139174 ACATGCATGTAACTATTAAAAAGTTGC 57.861 29.630 30.50 13.10 39.68 4.17
3946 4052 9.357652 CATGCATGTAACTATTAAAAAGTTGCT 57.642 29.630 18.91 6.24 39.45 3.91
3949 4055 9.010366 GCATGTAACTATTAAAAAGTTGCTAGC 57.990 33.333 8.10 8.10 39.45 3.42
3952 4058 8.225107 TGTAACTATTAAAAAGTTGCTAGCACG 58.775 33.333 19.17 0.04 39.45 5.34
3953 4059 7.429636 AACTATTAAAAAGTTGCTAGCACGA 57.570 32.000 19.17 0.00 35.87 4.35
3954 4060 7.061752 ACTATTAAAAAGTTGCTAGCACGAG 57.938 36.000 19.17 5.13 0.00 4.18
3955 4061 4.742438 TTAAAAAGTTGCTAGCACGAGG 57.258 40.909 19.17 0.00 0.00 4.63
3956 4062 2.543777 AAAAGTTGCTAGCACGAGGA 57.456 45.000 19.17 0.00 0.00 3.71
3957 4063 2.543777 AAAGTTGCTAGCACGAGGAA 57.456 45.000 19.17 0.00 0.00 3.36
3958 4064 2.543777 AAGTTGCTAGCACGAGGAAA 57.456 45.000 19.17 0.00 0.00 3.13
3959 4065 1.797025 AGTTGCTAGCACGAGGAAAC 58.203 50.000 19.17 11.24 0.00 2.78
3960 4066 1.070134 AGTTGCTAGCACGAGGAAACA 59.930 47.619 19.17 0.00 0.00 2.83
3961 4067 2.076863 GTTGCTAGCACGAGGAAACAT 58.923 47.619 19.17 0.00 0.00 2.71
3962 4068 2.010145 TGCTAGCACGAGGAAACATC 57.990 50.000 14.93 0.00 0.00 3.06
3963 4069 1.275010 TGCTAGCACGAGGAAACATCA 59.725 47.619 14.93 0.00 0.00 3.07
3964 4070 2.093500 TGCTAGCACGAGGAAACATCAT 60.093 45.455 14.93 0.00 0.00 2.45
3965 4071 2.939103 GCTAGCACGAGGAAACATCATT 59.061 45.455 10.63 0.00 0.00 2.57
3966 4072 4.119862 GCTAGCACGAGGAAACATCATTA 58.880 43.478 10.63 0.00 0.00 1.90
3967 4073 4.570772 GCTAGCACGAGGAAACATCATTAA 59.429 41.667 10.63 0.00 0.00 1.40
3968 4074 5.237344 GCTAGCACGAGGAAACATCATTAAT 59.763 40.000 10.63 0.00 0.00 1.40
3969 4075 6.238484 GCTAGCACGAGGAAACATCATTAATT 60.238 38.462 10.63 0.00 0.00 1.40
3970 4076 6.515272 AGCACGAGGAAACATCATTAATTT 57.485 33.333 0.00 0.00 0.00 1.82
3971 4077 6.924111 AGCACGAGGAAACATCATTAATTTT 58.076 32.000 0.00 0.00 0.00 1.82
3972 4078 7.378181 AGCACGAGGAAACATCATTAATTTTT 58.622 30.769 0.00 0.00 0.00 1.94
3973 4079 7.329226 AGCACGAGGAAACATCATTAATTTTTG 59.671 33.333 0.00 0.00 0.00 2.44
3974 4080 7.447430 CACGAGGAAACATCATTAATTTTTGC 58.553 34.615 0.00 0.00 0.00 3.68
3975 4081 6.589907 ACGAGGAAACATCATTAATTTTTGCC 59.410 34.615 0.00 0.00 28.59 4.52
3976 4082 6.813152 CGAGGAAACATCATTAATTTTTGCCT 59.187 34.615 0.00 0.00 28.59 4.75
3977 4083 7.009540 CGAGGAAACATCATTAATTTTTGCCTC 59.990 37.037 10.00 10.00 33.54 4.70
3978 4084 6.813152 AGGAAACATCATTAATTTTTGCCTCG 59.187 34.615 0.00 0.00 28.59 4.63
3979 4085 6.035975 GGAAACATCATTAATTTTTGCCTCGG 59.964 38.462 0.00 0.00 0.00 4.63
3980 4086 5.659440 ACATCATTAATTTTTGCCTCGGT 57.341 34.783 0.00 0.00 0.00 4.69
3981 4087 6.036577 ACATCATTAATTTTTGCCTCGGTT 57.963 33.333 0.00 0.00 0.00 4.44
3982 4088 7.164230 ACATCATTAATTTTTGCCTCGGTTA 57.836 32.000 0.00 0.00 0.00 2.85
3983 4089 7.033185 ACATCATTAATTTTTGCCTCGGTTAC 58.967 34.615 0.00 0.00 0.00 2.50
3984 4090 6.827586 TCATTAATTTTTGCCTCGGTTACT 57.172 33.333 0.00 0.00 0.00 2.24
3985 4091 6.616947 TCATTAATTTTTGCCTCGGTTACTG 58.383 36.000 0.00 0.00 0.00 2.74
3986 4092 6.207810 TCATTAATTTTTGCCTCGGTTACTGT 59.792 34.615 0.00 0.00 0.00 3.55
3987 4093 4.929819 AATTTTTGCCTCGGTTACTGTT 57.070 36.364 0.00 0.00 0.00 3.16
3988 4094 3.701532 TTTTTGCCTCGGTTACTGTTG 57.298 42.857 0.00 0.00 0.00 3.33
3989 4095 1.600023 TTTGCCTCGGTTACTGTTGG 58.400 50.000 0.00 0.00 0.00 3.77
3990 4096 0.470766 TTGCCTCGGTTACTGTTGGT 59.529 50.000 7.50 0.00 0.00 3.67
3991 4097 0.250124 TGCCTCGGTTACTGTTGGTG 60.250 55.000 7.50 0.00 0.00 4.17
3992 4098 0.953960 GCCTCGGTTACTGTTGGTGG 60.954 60.000 7.50 0.00 0.00 4.61
3993 4099 0.953960 CCTCGGTTACTGTTGGTGGC 60.954 60.000 0.00 0.00 0.00 5.01
3994 4100 0.953960 CTCGGTTACTGTTGGTGGCC 60.954 60.000 0.00 0.00 0.00 5.36
3995 4101 1.072505 CGGTTACTGTTGGTGGCCT 59.927 57.895 3.32 0.00 0.00 5.19
3996 4102 0.536460 CGGTTACTGTTGGTGGCCTT 60.536 55.000 3.32 0.00 0.00 4.35
3997 4103 0.958822 GGTTACTGTTGGTGGCCTTG 59.041 55.000 3.32 0.00 0.00 3.61
3998 4104 1.687563 GTTACTGTTGGTGGCCTTGT 58.312 50.000 3.32 0.00 0.00 3.16
3999 4105 2.487625 GGTTACTGTTGGTGGCCTTGTA 60.488 50.000 3.32 0.00 0.00 2.41
4000 4106 3.418047 GTTACTGTTGGTGGCCTTGTAT 58.582 45.455 3.32 0.00 0.00 2.29
4001 4107 2.675658 ACTGTTGGTGGCCTTGTATT 57.324 45.000 3.32 0.00 0.00 1.89
4002 4108 2.238521 ACTGTTGGTGGCCTTGTATTG 58.761 47.619 3.32 0.00 0.00 1.90
4003 4109 2.158534 ACTGTTGGTGGCCTTGTATTGA 60.159 45.455 3.32 0.00 0.00 2.57
4004 4110 3.091545 CTGTTGGTGGCCTTGTATTGAT 58.908 45.455 3.32 0.00 0.00 2.57
4005 4111 2.824936 TGTTGGTGGCCTTGTATTGATG 59.175 45.455 3.32 0.00 0.00 3.07
4006 4112 1.473258 TGGTGGCCTTGTATTGATGC 58.527 50.000 3.32 0.00 0.00 3.91
4007 4113 1.272369 TGGTGGCCTTGTATTGATGCA 60.272 47.619 3.32 0.00 0.00 3.96
4008 4114 1.824230 GGTGGCCTTGTATTGATGCAA 59.176 47.619 3.32 0.00 0.00 4.08
4009 4115 2.233431 GGTGGCCTTGTATTGATGCAAA 59.767 45.455 3.32 0.00 32.12 3.68
4010 4116 3.306641 GGTGGCCTTGTATTGATGCAAAA 60.307 43.478 3.32 0.00 32.12 2.44
4011 4117 4.506758 GTGGCCTTGTATTGATGCAAAAT 58.493 39.130 3.32 0.00 32.12 1.82
4012 4118 4.330620 GTGGCCTTGTATTGATGCAAAATG 59.669 41.667 3.32 0.00 32.12 2.32
4013 4119 4.020396 TGGCCTTGTATTGATGCAAAATGT 60.020 37.500 3.32 0.00 32.12 2.71
4014 4120 5.186603 TGGCCTTGTATTGATGCAAAATGTA 59.813 36.000 3.32 0.00 32.12 2.29
4015 4121 6.127111 TGGCCTTGTATTGATGCAAAATGTAT 60.127 34.615 3.32 0.00 32.12 2.29
4016 4122 6.762661 GGCCTTGTATTGATGCAAAATGTATT 59.237 34.615 0.00 0.00 32.12 1.89
4017 4123 7.280652 GGCCTTGTATTGATGCAAAATGTATTT 59.719 33.333 0.00 0.00 32.12 1.40
4018 4124 8.667463 GCCTTGTATTGATGCAAAATGTATTTT 58.333 29.630 7.96 0.00 40.37 1.82
4040 4146 8.801882 TTTTTGATAGTGGTCTTGTATAAGGG 57.198 34.615 0.00 0.00 34.59 3.95
4041 4147 7.743116 TTTGATAGTGGTCTTGTATAAGGGA 57.257 36.000 0.00 0.00 34.59 4.20
4042 4148 7.743116 TTGATAGTGGTCTTGTATAAGGGAA 57.257 36.000 0.00 0.00 34.59 3.97
4043 4149 7.931015 TGATAGTGGTCTTGTATAAGGGAAT 57.069 36.000 0.00 0.00 34.59 3.01
4044 4150 7.735917 TGATAGTGGTCTTGTATAAGGGAATG 58.264 38.462 0.00 0.00 34.59 2.67
4045 4151 5.373812 AGTGGTCTTGTATAAGGGAATGG 57.626 43.478 0.00 0.00 34.59 3.16
4046 4152 5.036916 AGTGGTCTTGTATAAGGGAATGGA 58.963 41.667 0.00 0.00 34.59 3.41
4047 4153 5.131142 AGTGGTCTTGTATAAGGGAATGGAG 59.869 44.000 0.00 0.00 34.59 3.86
4048 4154 4.412199 TGGTCTTGTATAAGGGAATGGAGG 59.588 45.833 0.00 0.00 34.59 4.30
4049 4155 4.202472 GGTCTTGTATAAGGGAATGGAGGG 60.202 50.000 0.00 0.00 34.59 4.30
4050 4156 4.658901 GTCTTGTATAAGGGAATGGAGGGA 59.341 45.833 0.00 0.00 34.59 4.20
4051 4157 4.907875 TCTTGTATAAGGGAATGGAGGGAG 59.092 45.833 0.00 0.00 34.59 4.30
4052 4158 4.295905 TGTATAAGGGAATGGAGGGAGT 57.704 45.455 0.00 0.00 0.00 3.85
4053 4159 5.427857 TGTATAAGGGAATGGAGGGAGTA 57.572 43.478 0.00 0.00 0.00 2.59
4057 4163 4.578149 AAGGGAATGGAGGGAGTATAGT 57.422 45.455 0.00 0.00 0.00 2.12
4152 4259 1.134965 GTTCACCTGATCACCTCCGAG 60.135 57.143 0.00 0.00 0.00 4.63
4252 4359 5.615289 AGATTAAGATGCCGCTGTCTTTAT 58.385 37.500 14.12 11.46 36.23 1.40
4253 4360 5.468072 AGATTAAGATGCCGCTGTCTTTATG 59.532 40.000 14.12 0.00 36.23 1.90
4359 4466 6.389830 TGTGTTACAGTCTTCAATTTGCAT 57.610 33.333 0.00 0.00 0.00 3.96
4575 4682 6.038825 TGAGGTACGAACAATCAACACAAATT 59.961 34.615 0.00 0.00 0.00 1.82
4578 4685 6.693545 GGTACGAACAATCAACACAAATTTGA 59.306 34.615 24.64 1.90 37.38 2.69
4598 4705 9.643693 AATTTGAGCAGTTTTATTTCTACATGG 57.356 29.630 0.00 0.00 0.00 3.66
4633 4740 3.346315 TGGCTTCATGTATCACAACAGG 58.654 45.455 0.00 0.00 31.70 4.00
4675 4782 6.262273 GGAAACTGAAGGACATAAACTCAACA 59.738 38.462 0.00 0.00 0.00 3.33
4712 4819 4.848357 AGGTAATTGTCCATTGACTCCAG 58.152 43.478 0.00 0.00 42.28 3.86
4713 4820 3.947834 GGTAATTGTCCATTGACTCCAGG 59.052 47.826 0.00 0.00 42.28 4.45
4896 5003 1.204146 TAGCTCCACCATCCTTCACC 58.796 55.000 0.00 0.00 0.00 4.02
4987 5094 0.886563 ATGCTTCTCAAGTTGCAGCC 59.113 50.000 15.07 0.00 38.87 4.85
5683 5790 3.165606 GCAGCTGGCTGTTAGATGT 57.834 52.632 21.34 0.00 45.24 3.06
5687 5794 2.169352 CAGCTGGCTGTTAGATGTACCT 59.831 50.000 13.76 0.00 39.10 3.08
5749 5856 6.766467 CCAAGTAAAGTCTTCAGTAGGTTGTT 59.234 38.462 0.00 0.00 0.00 2.83
5842 5949 5.834239 CATTGCCTGCTTTCTTTACAAAG 57.166 39.130 0.00 0.00 36.58 2.77
5945 6053 3.621715 ACTGACTTGAACAAAACCGACTC 59.378 43.478 0.00 0.00 0.00 3.36
5954 6062 4.931661 ACAAAACCGACTCAAGACTCTA 57.068 40.909 0.00 0.00 0.00 2.43
5955 6063 4.618965 ACAAAACCGACTCAAGACTCTAC 58.381 43.478 0.00 0.00 0.00 2.59
5956 6064 4.341520 ACAAAACCGACTCAAGACTCTACT 59.658 41.667 0.00 0.00 0.00 2.57
5957 6065 5.163437 ACAAAACCGACTCAAGACTCTACTT 60.163 40.000 0.00 0.00 0.00 2.24
5958 6066 4.769859 AACCGACTCAAGACTCTACTTC 57.230 45.455 0.00 0.00 0.00 3.01
5959 6067 4.023726 ACCGACTCAAGACTCTACTTCT 57.976 45.455 0.00 0.00 0.00 2.85
5960 6068 5.163281 ACCGACTCAAGACTCTACTTCTA 57.837 43.478 0.00 0.00 0.00 2.10
5961 6069 5.558818 ACCGACTCAAGACTCTACTTCTAA 58.441 41.667 0.00 0.00 0.00 2.10
5962 6070 6.181908 ACCGACTCAAGACTCTACTTCTAAT 58.818 40.000 0.00 0.00 0.00 1.73
5963 6071 7.337167 ACCGACTCAAGACTCTACTTCTAATA 58.663 38.462 0.00 0.00 0.00 0.98
5964 6072 7.496591 ACCGACTCAAGACTCTACTTCTAATAG 59.503 40.741 0.00 0.00 0.00 1.73
5965 6073 7.041644 CCGACTCAAGACTCTACTTCTAATAGG 60.042 44.444 0.00 0.00 0.00 2.57
5966 6074 7.711772 CGACTCAAGACTCTACTTCTAATAGGA 59.288 40.741 0.00 0.00 0.00 2.94
5967 6075 8.741603 ACTCAAGACTCTACTTCTAATAGGAC 57.258 38.462 0.00 0.00 0.00 3.85
5968 6076 8.554011 ACTCAAGACTCTACTTCTAATAGGACT 58.446 37.037 0.00 0.00 0.00 3.85
5969 6077 8.967664 TCAAGACTCTACTTCTAATAGGACTC 57.032 38.462 0.00 0.00 0.00 3.36
5987 6095 7.701257 AGGACTCTACTTCTAATAGGACTCT 57.299 40.000 0.00 0.00 0.00 3.24
6021 6130 2.736144 TACACCGCACTAAACTGGAG 57.264 50.000 0.00 0.00 0.00 3.86
6128 6237 8.038944 TGGAACTATGTCCTATTACTCACAAAC 58.961 37.037 0.00 0.00 38.62 2.93
6182 6291 2.475466 CGAGTGGATGGGTGCATGC 61.475 63.158 11.82 11.82 0.00 4.06
6300 6409 6.017440 TGTCCTCACTTGTTACTAAAATGCAC 60.017 38.462 0.00 0.00 0.00 4.57
6360 6469 9.524106 AGAATGTTAAATATCACATGCACATTG 57.476 29.630 0.00 0.00 34.53 2.82
6377 6486 3.701040 ACATTGCTTCTGTTCCACACTTT 59.299 39.130 0.00 0.00 0.00 2.66
6409 6518 5.841957 ACTGAGTTTGCATCTCTGTTTTT 57.158 34.783 18.77 4.72 39.72 1.94
6419 6528 3.222173 TCTCTGTTTTTAGGCAAGGCA 57.778 42.857 0.00 0.00 0.00 4.75
6448 6557 0.394565 AGAGATATGCGTCCTTGCCC 59.605 55.000 0.00 0.00 0.00 5.36
6478 6587 0.528470 GCAGAGCACGTCTTAGGACT 59.472 55.000 3.27 0.00 40.10 3.85
6553 6662 4.021229 AGCATTGATGTGATGATGGTGTT 58.979 39.130 0.00 0.00 0.00 3.32
6612 6722 7.114095 TGACTTGTTAGTTTGGAGGTAACTTT 58.886 34.615 0.00 0.00 40.98 2.66
6613 6723 8.266473 TGACTTGTTAGTTTGGAGGTAACTTTA 58.734 33.333 0.00 0.00 40.98 1.85
6649 6813 6.867662 ACCTTCTGACAACTACATGAAAAG 57.132 37.500 0.00 0.00 0.00 2.27
6657 6821 9.203421 CTGACAACTACATGAAAAGTATGTGTA 57.797 33.333 0.00 0.00 39.03 2.90
6678 6842 8.105197 TGTGTAGTATGAAGACCTAAGTACAGA 58.895 37.037 0.00 0.00 0.00 3.41
6686 6850 8.433421 TGAAGACCTAAGTACAGAAAAAGTTG 57.567 34.615 0.00 0.00 0.00 3.16
6687 6851 8.044908 TGAAGACCTAAGTACAGAAAAAGTTGT 58.955 33.333 0.00 0.00 0.00 3.32
6725 6889 5.663158 TTTTAAGATATTGGGAGGGGAGG 57.337 43.478 0.00 0.00 0.00 4.30
6726 6890 1.450360 AAGATATTGGGAGGGGAGGC 58.550 55.000 0.00 0.00 0.00 4.70
6751 6916 5.028131 CCTTCCCACCCTAGAGTTAACTTA 58.972 45.833 10.02 3.81 0.00 2.24
6870 7035 6.423182 TCCTTTTAGGTTATCCATGAGGTTG 58.577 40.000 0.00 0.00 36.53 3.77
7022 7225 2.278026 TGCAGCTACATACTGTCACG 57.722 50.000 0.00 0.00 37.47 4.35
7066 7309 5.105392 TGCCTTGAAAGTTGAAATCACACTT 60.105 36.000 5.65 5.65 32.61 3.16
7106 7349 1.264749 ACGAGTCAGGCAAGGGCATA 61.265 55.000 0.00 0.00 43.71 3.14
7183 7434 6.591834 AGTGAAACAACTCTACATGTATCAGC 59.408 38.462 5.91 0.97 41.43 4.26
7261 7512 4.503741 AGCTTCAAACGTGCATTTATGT 57.496 36.364 0.00 0.00 0.00 2.29
7290 7541 3.206150 CCTGGAAGTTGTTATATGCGCT 58.794 45.455 9.73 0.00 0.00 5.92
7292 7543 3.867857 TGGAAGTTGTTATATGCGCTCA 58.132 40.909 9.73 0.00 0.00 4.26
7293 7544 3.621268 TGGAAGTTGTTATATGCGCTCAC 59.379 43.478 9.73 0.00 0.00 3.51
7308 7559 1.337823 GCTCACGAAGGCACCTTTAGA 60.338 52.381 2.89 1.90 36.26 2.10
7370 7621 9.844790 CATACAATGTTCAATTTCTTCAGCTAA 57.155 29.630 0.00 0.00 0.00 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.079888 CAACCGCTCCCCAAAATGC 60.080 57.895 0.00 0.00 0.00 3.56
29 31 1.233019 GCTTGTGTGTCACTGCAGAT 58.767 50.000 23.35 1.19 35.77 2.90
61 63 1.684983 CCTACGTGATTATGGGTCGGT 59.315 52.381 0.00 0.00 0.00 4.69
63 65 1.067974 TGCCTACGTGATTATGGGTCG 59.932 52.381 0.00 0.00 0.00 4.79
66 68 2.210116 GTGTGCCTACGTGATTATGGG 58.790 52.381 0.00 0.00 0.00 4.00
76 78 2.087501 TTGGTGTATGTGTGCCTACG 57.912 50.000 0.00 0.00 0.00 3.51
169 179 7.905493 GCATTTTTCAAATTCACGGTGTTTTAA 59.095 29.630 8.17 0.00 0.00 1.52
170 180 7.278868 AGCATTTTTCAAATTCACGGTGTTTTA 59.721 29.630 8.17 0.00 0.00 1.52
471 493 8.419076 AACATTTTTCCAACACATACTGAAAC 57.581 30.769 0.00 0.00 0.00 2.78
478 500 7.974501 ACGTGTTAAACATTTTTCCAACACATA 59.025 29.630 17.15 0.00 40.84 2.29
479 501 6.814146 ACGTGTTAAACATTTTTCCAACACAT 59.186 30.769 17.15 5.40 40.84 3.21
492 514 9.535878 AACATTTTTGGAATACGTGTTAAACAT 57.464 25.926 0.00 0.00 0.00 2.71
745 778 6.512342 TCTTTGTTTCTTTCACCGGTTTTA 57.488 33.333 2.97 0.00 0.00 1.52
816 852 8.223177 TCTCTTTCGGTTTTGTTTGGTTATTA 57.777 30.769 0.00 0.00 0.00 0.98
885 922 0.179108 CCTACGCAAGGCTAGTGGAC 60.179 60.000 0.00 0.00 46.39 4.02
1216 1259 1.544246 GCAAACTAGTGCGGGGAAAAT 59.456 47.619 0.00 0.00 34.21 1.82
1333 1377 2.082366 GCACAAAAGGCATGACGCG 61.082 57.895 3.53 3.53 43.84 6.01
1353 1397 5.778241 TGAACACTTTCATCCTGGTCTACTA 59.222 40.000 0.00 0.00 36.79 1.82
1424 1468 6.486657 ACAGCATTGCTTTCTCTTAACTACAA 59.513 34.615 8.83 0.00 36.40 2.41
1589 1675 7.215719 ACTGAGCATTACGATAGCACTATAA 57.784 36.000 0.00 0.00 42.67 0.98
1656 1742 8.165239 TCCAAATGCATATGTATGGTAAGTTC 57.835 34.615 7.09 0.00 34.32 3.01
1774 1863 2.161410 GCAATCAACAGCGTACCATGAA 59.839 45.455 0.00 0.00 0.00 2.57
1785 1874 3.144506 ACTCCAGTTCAGCAATCAACAG 58.855 45.455 0.00 0.00 0.00 3.16
1861 1950 3.337358 TGGTGTGACACAAGCATGATAG 58.663 45.455 18.40 0.00 35.86 2.08
2103 2194 5.557866 ACACATTTAAACCTACTGGAGACC 58.442 41.667 0.00 0.00 37.04 3.85
2179 2272 7.379529 CCGTTTAGACACTAGTTACTCGAAAAA 59.620 37.037 0.00 0.00 0.00 1.94
2328 2421 3.838244 AGGACCGCAAAGCATATAGAA 57.162 42.857 0.00 0.00 0.00 2.10
2485 2578 8.598041 AGGACCAAAGAATAAGCTATACCATAG 58.402 37.037 0.00 0.00 0.00 2.23
2579 2678 2.223226 TGTGCACTGAATTCACACAACG 60.223 45.455 21.54 7.93 38.24 4.10
2582 2681 4.133078 TGTATGTGCACTGAATTCACACA 58.867 39.130 24.31 24.31 42.59 3.72
2583 2682 4.747540 TGTATGTGCACTGAATTCACAC 57.252 40.909 19.41 16.74 42.59 3.82
2586 2685 5.963176 AACATGTATGTGCACTGAATTCA 57.037 34.783 19.41 8.12 41.61 2.57
2662 2763 2.480416 CGACTCTATTGGAGCTGGTGAC 60.480 54.545 0.00 0.00 45.48 3.67
2731 2832 1.068333 GTGCACGAACTTACTCCCGTA 60.068 52.381 0.00 0.00 33.62 4.02
2734 2835 0.034337 TGGTGCACGAACTTACTCCC 59.966 55.000 11.45 0.00 0.00 4.30
2765 2866 7.880713 TGTAAGTCACATAAACCATGAAGCTAA 59.119 33.333 0.00 0.00 38.10 3.09
2782 2883 5.625311 GCAAAAGTATGCAAGTGTAAGTCAC 59.375 40.000 0.00 0.00 45.70 3.67
2783 2884 5.757886 GCAAAAGTATGCAAGTGTAAGTCA 58.242 37.500 0.00 0.00 45.70 3.41
2856 2959 6.639632 AATACATCAACAAAGCAGAACTGT 57.360 33.333 3.77 0.00 0.00 3.55
3137 3241 5.003402 CACGTATTGGTGCGAATTGAATTTC 59.997 40.000 0.00 0.00 36.89 2.17
3159 3263 7.806690 TGAAGATGTCTTTAAATGTACTGCAC 58.193 34.615 0.00 0.00 36.11 4.57
3168 3272 7.147949 CCAGGCTCATTGAAGATGTCTTTAAAT 60.148 37.037 4.40 2.60 35.53 1.40
3382 3486 3.131396 AGAAAACAGCTACAAGTCGGTG 58.869 45.455 2.86 2.86 34.97 4.94
3439 3544 9.765295 AAGGTAGTCCACTAAATCTCTAGTTTA 57.235 33.333 0.00 0.00 35.89 2.01
3448 3553 5.475564 TGGCAAAAAGGTAGTCCACTAAATC 59.524 40.000 0.00 0.00 35.89 2.17
3483 3589 9.722184 CACATCACTCAATATCTTGAAGGATAT 57.278 33.333 0.00 0.00 40.78 1.63
3502 3608 6.076981 ACCAAAAGTTTCAGATCACATCAC 57.923 37.500 0.00 0.00 0.00 3.06
3597 3703 7.380536 TGCAAACATTAATGAAGATGCTTTCT 58.619 30.769 22.16 0.00 35.70 2.52
3620 3726 9.907576 GATATTTCTATACGTCATATTGCTTGC 57.092 33.333 0.00 0.00 0.00 4.01
3653 3759 9.057089 AGCCATGTTGCTAAGTATAGAAAATAC 57.943 33.333 0.00 0.00 40.56 1.89
3696 3802 6.864685 GTCAAATTGAGAATGTCTGATGCAAA 59.135 34.615 0.00 0.00 0.00 3.68
3755 3861 0.257039 CCTTGTGGGAATGGAGGGAG 59.743 60.000 0.00 0.00 37.23 4.30
3756 3862 1.863155 GCCTTGTGGGAATGGAGGGA 61.863 60.000 0.00 0.00 37.23 4.20
3757 3863 1.380380 GCCTTGTGGGAATGGAGGG 60.380 63.158 0.00 0.00 37.23 4.30
3758 3864 1.380380 GGCCTTGTGGGAATGGAGG 60.380 63.158 0.00 0.00 37.23 4.30
3759 3865 0.967380 GTGGCCTTGTGGGAATGGAG 60.967 60.000 3.32 0.00 37.23 3.86
3760 3866 1.076549 GTGGCCTTGTGGGAATGGA 59.923 57.895 3.32 0.00 37.23 3.41
3761 3867 0.831288 TTGTGGCCTTGTGGGAATGG 60.831 55.000 3.32 0.00 37.23 3.16
3762 3868 1.047002 TTTGTGGCCTTGTGGGAATG 58.953 50.000 3.32 0.00 37.23 2.67
3763 3869 1.047801 GTTTGTGGCCTTGTGGGAAT 58.952 50.000 3.32 0.00 37.23 3.01
3764 3870 0.032615 AGTTTGTGGCCTTGTGGGAA 60.033 50.000 3.32 0.00 37.23 3.97
3765 3871 0.467290 GAGTTTGTGGCCTTGTGGGA 60.467 55.000 3.32 0.00 37.23 4.37
3766 3872 0.754957 TGAGTTTGTGGCCTTGTGGG 60.755 55.000 3.32 0.00 38.36 4.61
3767 3873 0.670162 CTGAGTTTGTGGCCTTGTGG 59.330 55.000 3.32 0.00 0.00 4.17
3768 3874 1.679139 TCTGAGTTTGTGGCCTTGTG 58.321 50.000 3.32 0.00 0.00 3.33
3769 3875 2.664402 ATCTGAGTTTGTGGCCTTGT 57.336 45.000 3.32 0.00 0.00 3.16
3770 3876 3.820467 TGTAATCTGAGTTTGTGGCCTTG 59.180 43.478 3.32 0.00 0.00 3.61
3771 3877 4.074970 CTGTAATCTGAGTTTGTGGCCTT 58.925 43.478 3.32 0.00 0.00 4.35
3772 3878 3.560025 CCTGTAATCTGAGTTTGTGGCCT 60.560 47.826 3.32 0.00 0.00 5.19
3773 3879 2.749621 CCTGTAATCTGAGTTTGTGGCC 59.250 50.000 0.00 0.00 0.00 5.36
3774 3880 3.412386 ACCTGTAATCTGAGTTTGTGGC 58.588 45.455 0.00 0.00 0.00 5.01
3775 3881 4.935808 GGTACCTGTAATCTGAGTTTGTGG 59.064 45.833 4.06 0.00 0.00 4.17
3776 3882 5.547465 TGGTACCTGTAATCTGAGTTTGTG 58.453 41.667 14.36 0.00 0.00 3.33
3777 3883 5.818678 TGGTACCTGTAATCTGAGTTTGT 57.181 39.130 14.36 0.00 0.00 2.83
3778 3884 6.464222 TCTTGGTACCTGTAATCTGAGTTTG 58.536 40.000 14.36 0.00 0.00 2.93
3779 3885 6.681729 TCTTGGTACCTGTAATCTGAGTTT 57.318 37.500 14.36 0.00 0.00 2.66
3780 3886 6.875972 ATCTTGGTACCTGTAATCTGAGTT 57.124 37.500 14.36 0.00 0.00 3.01
3781 3887 7.973048 TTATCTTGGTACCTGTAATCTGAGT 57.027 36.000 14.36 0.00 0.00 3.41
3782 3888 9.838339 ATTTTATCTTGGTACCTGTAATCTGAG 57.162 33.333 14.36 0.00 0.00 3.35
3790 3896 8.474831 GCCATTAAATTTTATCTTGGTACCTGT 58.525 33.333 14.36 0.00 0.00 4.00
3791 3897 8.695456 AGCCATTAAATTTTATCTTGGTACCTG 58.305 33.333 14.36 6.30 0.00 4.00
3792 3898 8.695456 CAGCCATTAAATTTTATCTTGGTACCT 58.305 33.333 14.36 0.00 0.00 3.08
3793 3899 7.438160 GCAGCCATTAAATTTTATCTTGGTACC 59.562 37.037 4.43 4.43 0.00 3.34
3794 3900 8.197439 AGCAGCCATTAAATTTTATCTTGGTAC 58.803 33.333 0.00 0.00 0.00 3.34
3795 3901 8.305046 AGCAGCCATTAAATTTTATCTTGGTA 57.695 30.769 0.00 0.00 0.00 3.25
3796 3902 7.186570 AGCAGCCATTAAATTTTATCTTGGT 57.813 32.000 0.00 0.00 0.00 3.67
3797 3903 8.392612 CAAAGCAGCCATTAAATTTTATCTTGG 58.607 33.333 0.00 0.00 0.00 3.61
3798 3904 7.906527 GCAAAGCAGCCATTAAATTTTATCTTG 59.093 33.333 0.00 0.00 0.00 3.02
3799 3905 7.607223 TGCAAAGCAGCCATTAAATTTTATCTT 59.393 29.630 0.00 0.00 33.32 2.40
3800 3906 7.104939 TGCAAAGCAGCCATTAAATTTTATCT 58.895 30.769 0.00 0.00 33.32 1.98
3801 3907 7.306205 TGCAAAGCAGCCATTAAATTTTATC 57.694 32.000 0.00 0.00 33.32 1.75
3802 3908 7.684937 TTGCAAAGCAGCCATTAAATTTTAT 57.315 28.000 0.00 0.00 40.61 1.40
3803 3909 7.131498 CTTGCAAAGCAGCCATTAAATTTTA 57.869 32.000 0.00 0.00 40.61 1.52
3804 3910 6.004408 CTTGCAAAGCAGCCATTAAATTTT 57.996 33.333 0.00 0.00 40.61 1.82
3805 3911 5.616488 CTTGCAAAGCAGCCATTAAATTT 57.384 34.783 0.00 0.00 40.61 1.82
3820 3926 5.923684 ACGAAAAGAAAAGTTGACTTGCAAA 59.076 32.000 0.00 0.00 38.44 3.68
3821 3927 5.465935 ACGAAAAGAAAAGTTGACTTGCAA 58.534 33.333 0.00 0.00 36.12 4.08
3822 3928 5.054390 ACGAAAAGAAAAGTTGACTTGCA 57.946 34.783 0.00 0.00 36.12 4.08
3823 3929 7.500807 TTAACGAAAAGAAAAGTTGACTTGC 57.499 32.000 0.00 0.00 36.12 4.01
3824 3930 8.461398 CGATTAACGAAAAGAAAAGTTGACTTG 58.539 33.333 0.00 0.00 45.77 3.16
3825 3931 7.642586 CCGATTAACGAAAAGAAAAGTTGACTT 59.357 33.333 0.00 0.00 45.77 3.01
3826 3932 7.130269 CCGATTAACGAAAAGAAAAGTTGACT 58.870 34.615 0.00 0.00 45.77 3.41
3827 3933 6.358822 CCCGATTAACGAAAAGAAAAGTTGAC 59.641 38.462 0.00 0.00 45.77 3.18
3828 3934 6.260493 TCCCGATTAACGAAAAGAAAAGTTGA 59.740 34.615 0.00 0.00 45.77 3.18
3829 3935 6.432107 TCCCGATTAACGAAAAGAAAAGTTG 58.568 36.000 0.00 0.00 45.77 3.16
3830 3936 6.622833 TCCCGATTAACGAAAAGAAAAGTT 57.377 33.333 0.00 0.00 45.77 2.66
3831 3937 6.428771 TGATCCCGATTAACGAAAAGAAAAGT 59.571 34.615 0.00 0.00 45.77 2.66
3832 3938 6.837992 TGATCCCGATTAACGAAAAGAAAAG 58.162 36.000 0.00 0.00 45.77 2.27
3833 3939 6.804770 TGATCCCGATTAACGAAAAGAAAA 57.195 33.333 0.00 0.00 45.77 2.29
3834 3940 6.995511 ATGATCCCGATTAACGAAAAGAAA 57.004 33.333 0.00 0.00 45.77 2.52
3835 3941 6.995511 AATGATCCCGATTAACGAAAAGAA 57.004 33.333 0.00 0.00 45.77 2.52
3836 3942 8.671384 ATTAATGATCCCGATTAACGAAAAGA 57.329 30.769 0.00 0.00 45.77 2.52
3837 3943 9.807386 GTATTAATGATCCCGATTAACGAAAAG 57.193 33.333 0.00 0.00 45.77 2.27
3838 3944 8.489559 CGTATTAATGATCCCGATTAACGAAAA 58.510 33.333 0.00 0.00 45.77 2.29
3839 3945 7.359431 GCGTATTAATGATCCCGATTAACGAAA 60.359 37.037 10.40 0.00 45.77 3.46
3840 3946 6.089820 GCGTATTAATGATCCCGATTAACGAA 59.910 38.462 10.40 0.00 45.77 3.85
3841 3947 5.574055 GCGTATTAATGATCCCGATTAACGA 59.426 40.000 10.40 0.00 45.77 3.85
3842 3948 5.220340 GGCGTATTAATGATCCCGATTAACG 60.220 44.000 0.00 0.00 42.18 3.18
3843 3949 5.640357 TGGCGTATTAATGATCCCGATTAAC 59.360 40.000 0.00 0.00 30.08 2.01
3844 3950 5.640357 GTGGCGTATTAATGATCCCGATTAA 59.360 40.000 0.00 0.00 31.50 1.40
3845 3951 5.172934 GTGGCGTATTAATGATCCCGATTA 58.827 41.667 0.00 0.00 0.00 1.75
3846 3952 4.000988 GTGGCGTATTAATGATCCCGATT 58.999 43.478 0.00 0.00 0.00 3.34
3847 3953 3.007506 TGTGGCGTATTAATGATCCCGAT 59.992 43.478 0.00 0.00 0.00 4.18
3848 3954 2.365941 TGTGGCGTATTAATGATCCCGA 59.634 45.455 0.00 0.00 0.00 5.14
3849 3955 2.761559 TGTGGCGTATTAATGATCCCG 58.238 47.619 0.00 0.00 0.00 5.14
3850 3956 3.058224 GCTTGTGGCGTATTAATGATCCC 60.058 47.826 0.00 0.00 0.00 3.85
3851 3957 3.563808 TGCTTGTGGCGTATTAATGATCC 59.436 43.478 0.00 0.00 45.43 3.36
3852 3958 4.811555 TGCTTGTGGCGTATTAATGATC 57.188 40.909 0.00 0.00 45.43 2.92
3853 3959 4.557296 GCATGCTTGTGGCGTATTAATGAT 60.557 41.667 11.37 0.00 45.43 2.45
3854 3960 3.243035 GCATGCTTGTGGCGTATTAATGA 60.243 43.478 11.37 0.00 45.43 2.57
3855 3961 3.044986 GCATGCTTGTGGCGTATTAATG 58.955 45.455 11.37 0.00 45.43 1.90
3856 3962 2.687425 TGCATGCTTGTGGCGTATTAAT 59.313 40.909 20.33 0.00 45.43 1.40
3857 3963 2.087646 TGCATGCTTGTGGCGTATTAA 58.912 42.857 20.33 0.00 45.43 1.40
3858 3964 1.743996 TGCATGCTTGTGGCGTATTA 58.256 45.000 20.33 0.00 45.43 0.98
3859 3965 0.887247 TTGCATGCTTGTGGCGTATT 59.113 45.000 20.33 0.00 45.43 1.89
3860 3966 0.171007 GTTGCATGCTTGTGGCGTAT 59.829 50.000 20.33 0.00 45.43 3.06
3861 3967 1.578926 GTTGCATGCTTGTGGCGTA 59.421 52.632 20.33 0.00 45.43 4.42
3862 3968 2.336088 GTTGCATGCTTGTGGCGT 59.664 55.556 20.33 0.00 45.43 5.68
3863 3969 2.730006 TTCGTTGCATGCTTGTGGCG 62.730 55.000 20.33 13.27 45.43 5.69
3864 3970 0.388907 ATTCGTTGCATGCTTGTGGC 60.389 50.000 20.33 1.81 42.22 5.01
3865 3971 1.068402 TCATTCGTTGCATGCTTGTGG 60.068 47.619 20.33 3.94 0.00 4.17
3866 3972 2.334971 TCATTCGTTGCATGCTTGTG 57.665 45.000 20.33 9.14 0.00 3.33
3867 3973 3.247442 CATTCATTCGTTGCATGCTTGT 58.753 40.909 20.33 0.00 0.00 3.16
3868 3974 2.601314 CCATTCATTCGTTGCATGCTTG 59.399 45.455 20.33 8.62 28.73 4.01
3869 3975 2.417651 CCCATTCATTCGTTGCATGCTT 60.418 45.455 20.33 0.00 28.73 3.91
3870 3976 1.135527 CCCATTCATTCGTTGCATGCT 59.864 47.619 20.33 0.00 28.73 3.79
3871 3977 1.134753 TCCCATTCATTCGTTGCATGC 59.865 47.619 11.82 11.82 28.73 4.06
3872 3978 3.441163 CTTCCCATTCATTCGTTGCATG 58.559 45.455 0.00 0.00 0.00 4.06
3873 3979 2.428171 CCTTCCCATTCATTCGTTGCAT 59.572 45.455 0.00 0.00 0.00 3.96
3874 3980 1.818060 CCTTCCCATTCATTCGTTGCA 59.182 47.619 0.00 0.00 0.00 4.08
3875 3981 2.091541 TCCTTCCCATTCATTCGTTGC 58.908 47.619 0.00 0.00 0.00 4.17
3876 3982 3.758554 ACTTCCTTCCCATTCATTCGTTG 59.241 43.478 0.00 0.00 0.00 4.10
3877 3983 4.034285 ACTTCCTTCCCATTCATTCGTT 57.966 40.909 0.00 0.00 0.00 3.85
3878 3984 3.721087 ACTTCCTTCCCATTCATTCGT 57.279 42.857 0.00 0.00 0.00 3.85
3879 3985 3.561725 GCTACTTCCTTCCCATTCATTCG 59.438 47.826 0.00 0.00 0.00 3.34
3880 3986 4.578105 CAGCTACTTCCTTCCCATTCATTC 59.422 45.833 0.00 0.00 0.00 2.67
3881 3987 4.228210 TCAGCTACTTCCTTCCCATTCATT 59.772 41.667 0.00 0.00 0.00 2.57
3882 3988 3.782523 TCAGCTACTTCCTTCCCATTCAT 59.217 43.478 0.00 0.00 0.00 2.57
3883 3989 3.181329 TCAGCTACTTCCTTCCCATTCA 58.819 45.455 0.00 0.00 0.00 2.57
3884 3990 3.198853 ACTCAGCTACTTCCTTCCCATTC 59.801 47.826 0.00 0.00 0.00 2.67
3885 3991 3.054802 CACTCAGCTACTTCCTTCCCATT 60.055 47.826 0.00 0.00 0.00 3.16
3886 3992 2.503356 CACTCAGCTACTTCCTTCCCAT 59.497 50.000 0.00 0.00 0.00 4.00
3887 3993 1.902508 CACTCAGCTACTTCCTTCCCA 59.097 52.381 0.00 0.00 0.00 4.37
3888 3994 1.903183 ACACTCAGCTACTTCCTTCCC 59.097 52.381 0.00 0.00 0.00 3.97
3889 3995 2.563179 TGACACTCAGCTACTTCCTTCC 59.437 50.000 0.00 0.00 0.00 3.46
3890 3996 3.944055 TGACACTCAGCTACTTCCTTC 57.056 47.619 0.00 0.00 0.00 3.46
3891 3997 4.899352 AATGACACTCAGCTACTTCCTT 57.101 40.909 0.00 0.00 0.00 3.36
3892 3998 5.658634 TCATAATGACACTCAGCTACTTCCT 59.341 40.000 0.00 0.00 0.00 3.36
3893 3999 5.751028 GTCATAATGACACTCAGCTACTTCC 59.249 44.000 0.00 0.00 46.22 3.46
3894 4000 6.820470 GTCATAATGACACTCAGCTACTTC 57.180 41.667 0.00 0.00 46.22 3.01
3902 4008 7.848846 ACATGCATGTAGTCATAATGACACTCA 60.849 37.037 30.50 0.00 42.13 3.41
3903 4009 6.481313 ACATGCATGTAGTCATAATGACACTC 59.519 38.462 30.50 0.00 42.13 3.51
3904 4010 6.351711 ACATGCATGTAGTCATAATGACACT 58.648 36.000 30.50 0.00 42.13 3.55
3905 4011 6.609237 ACATGCATGTAGTCATAATGACAC 57.391 37.500 30.50 0.00 42.13 3.67
3906 4012 7.986889 AGTTACATGCATGTAGTCATAATGACA 59.013 33.333 32.09 15.37 44.34 3.58
3907 4013 8.370493 AGTTACATGCATGTAGTCATAATGAC 57.630 34.615 32.09 24.66 43.44 3.06
3919 4025 9.139174 GCAACTTTTTAATAGTTACATGCATGT 57.861 29.630 33.20 33.20 44.48 3.21
3920 4026 9.357652 AGCAACTTTTTAATAGTTACATGCATG 57.642 29.630 25.09 25.09 34.22 4.06
3923 4029 9.010366 GCTAGCAACTTTTTAATAGTTACATGC 57.990 33.333 10.63 2.08 34.22 4.06
3926 4032 8.225107 CGTGCTAGCAACTTTTTAATAGTTACA 58.775 33.333 21.29 0.00 34.22 2.41
3927 4033 8.437742 TCGTGCTAGCAACTTTTTAATAGTTAC 58.562 33.333 21.29 0.00 34.22 2.50
3928 4034 8.537049 TCGTGCTAGCAACTTTTTAATAGTTA 57.463 30.769 21.29 0.00 34.22 2.24
3929 4035 7.360946 CCTCGTGCTAGCAACTTTTTAATAGTT 60.361 37.037 21.29 0.00 36.31 2.24
3930 4036 6.092259 CCTCGTGCTAGCAACTTTTTAATAGT 59.908 38.462 21.29 0.00 0.00 2.12
3931 4037 6.312918 TCCTCGTGCTAGCAACTTTTTAATAG 59.687 38.462 21.29 4.78 0.00 1.73
3932 4038 6.167685 TCCTCGTGCTAGCAACTTTTTAATA 58.832 36.000 21.29 0.00 0.00 0.98
3933 4039 5.001232 TCCTCGTGCTAGCAACTTTTTAAT 58.999 37.500 21.29 0.00 0.00 1.40
3934 4040 4.382291 TCCTCGTGCTAGCAACTTTTTAA 58.618 39.130 21.29 0.00 0.00 1.52
3935 4041 3.997762 TCCTCGTGCTAGCAACTTTTTA 58.002 40.909 21.29 0.00 0.00 1.52
3936 4042 2.846193 TCCTCGTGCTAGCAACTTTTT 58.154 42.857 21.29 0.00 0.00 1.94
3937 4043 2.543777 TCCTCGTGCTAGCAACTTTT 57.456 45.000 21.29 0.00 0.00 2.27
3938 4044 2.543777 TTCCTCGTGCTAGCAACTTT 57.456 45.000 21.29 0.00 0.00 2.66
3939 4045 2.143925 GTTTCCTCGTGCTAGCAACTT 58.856 47.619 21.29 0.00 0.00 2.66
3940 4046 1.070134 TGTTTCCTCGTGCTAGCAACT 59.930 47.619 21.29 0.00 0.00 3.16
3941 4047 1.508632 TGTTTCCTCGTGCTAGCAAC 58.491 50.000 21.29 12.72 0.00 4.17
3942 4048 2.289382 TGATGTTTCCTCGTGCTAGCAA 60.289 45.455 21.29 3.54 0.00 3.91
3943 4049 1.275010 TGATGTTTCCTCGTGCTAGCA 59.725 47.619 14.93 14.93 0.00 3.49
3944 4050 2.010145 TGATGTTTCCTCGTGCTAGC 57.990 50.000 8.10 8.10 0.00 3.42
3945 4051 6.851222 ATTAATGATGTTTCCTCGTGCTAG 57.149 37.500 0.00 0.00 0.00 3.42
3946 4052 7.624360 AAATTAATGATGTTTCCTCGTGCTA 57.376 32.000 0.00 0.00 0.00 3.49
3947 4053 6.515272 AAATTAATGATGTTTCCTCGTGCT 57.485 33.333 0.00 0.00 0.00 4.40
3948 4054 7.447430 CAAAAATTAATGATGTTTCCTCGTGC 58.553 34.615 0.00 0.00 0.00 5.34
3949 4055 7.411804 GGCAAAAATTAATGATGTTTCCTCGTG 60.412 37.037 0.00 0.00 0.00 4.35
3950 4056 6.589907 GGCAAAAATTAATGATGTTTCCTCGT 59.410 34.615 0.00 0.00 0.00 4.18
3951 4057 6.813152 AGGCAAAAATTAATGATGTTTCCTCG 59.187 34.615 0.00 0.00 0.00 4.63
3952 4058 7.009540 CGAGGCAAAAATTAATGATGTTTCCTC 59.990 37.037 0.00 0.00 36.77 3.71
3953 4059 6.813152 CGAGGCAAAAATTAATGATGTTTCCT 59.187 34.615 0.00 0.00 31.07 3.36
3954 4060 6.035975 CCGAGGCAAAAATTAATGATGTTTCC 59.964 38.462 0.00 0.00 0.00 3.13
3955 4061 6.589907 ACCGAGGCAAAAATTAATGATGTTTC 59.410 34.615 0.00 0.00 0.00 2.78
3956 4062 6.463360 ACCGAGGCAAAAATTAATGATGTTT 58.537 32.000 0.00 0.00 0.00 2.83
3957 4063 6.036577 ACCGAGGCAAAAATTAATGATGTT 57.963 33.333 0.00 0.00 0.00 2.71
3958 4064 5.659440 ACCGAGGCAAAAATTAATGATGT 57.341 34.783 0.00 0.00 0.00 3.06
3959 4065 7.220683 CAGTAACCGAGGCAAAAATTAATGATG 59.779 37.037 0.00 0.00 0.00 3.07
3960 4066 7.093945 ACAGTAACCGAGGCAAAAATTAATGAT 60.094 33.333 0.00 0.00 0.00 2.45
3961 4067 6.207810 ACAGTAACCGAGGCAAAAATTAATGA 59.792 34.615 0.00 0.00 0.00 2.57
3962 4068 6.386654 ACAGTAACCGAGGCAAAAATTAATG 58.613 36.000 0.00 0.00 0.00 1.90
3963 4069 6.584185 ACAGTAACCGAGGCAAAAATTAAT 57.416 33.333 0.00 0.00 0.00 1.40
3964 4070 6.210078 CAACAGTAACCGAGGCAAAAATTAA 58.790 36.000 0.00 0.00 0.00 1.40
3965 4071 5.278561 CCAACAGTAACCGAGGCAAAAATTA 60.279 40.000 0.00 0.00 0.00 1.40
3966 4072 4.500716 CCAACAGTAACCGAGGCAAAAATT 60.501 41.667 0.00 0.00 0.00 1.82
3967 4073 3.005367 CCAACAGTAACCGAGGCAAAAAT 59.995 43.478 0.00 0.00 0.00 1.82
3968 4074 2.359531 CCAACAGTAACCGAGGCAAAAA 59.640 45.455 0.00 0.00 0.00 1.94
3969 4075 1.950909 CCAACAGTAACCGAGGCAAAA 59.049 47.619 0.00 0.00 0.00 2.44
3970 4076 1.134037 ACCAACAGTAACCGAGGCAAA 60.134 47.619 0.00 0.00 0.00 3.68
3971 4077 0.470766 ACCAACAGTAACCGAGGCAA 59.529 50.000 0.00 0.00 0.00 4.52
3972 4078 0.250124 CACCAACAGTAACCGAGGCA 60.250 55.000 0.00 0.00 0.00 4.75
3973 4079 0.953960 CCACCAACAGTAACCGAGGC 60.954 60.000 0.00 0.00 0.00 4.70
3974 4080 0.953960 GCCACCAACAGTAACCGAGG 60.954 60.000 0.00 0.00 0.00 4.63
3975 4081 0.953960 GGCCACCAACAGTAACCGAG 60.954 60.000 0.00 0.00 0.00 4.63
3976 4082 1.071814 GGCCACCAACAGTAACCGA 59.928 57.895 0.00 0.00 0.00 4.69
3977 4083 0.536460 AAGGCCACCAACAGTAACCG 60.536 55.000 5.01 0.00 0.00 4.44
3978 4084 0.958822 CAAGGCCACCAACAGTAACC 59.041 55.000 5.01 0.00 0.00 2.85
3979 4085 1.687563 ACAAGGCCACCAACAGTAAC 58.312 50.000 5.01 0.00 0.00 2.50
3980 4086 3.799432 ATACAAGGCCACCAACAGTAA 57.201 42.857 5.01 0.00 0.00 2.24
3981 4087 3.073209 TCAATACAAGGCCACCAACAGTA 59.927 43.478 5.01 0.00 0.00 2.74
3982 4088 2.158534 TCAATACAAGGCCACCAACAGT 60.159 45.455 5.01 0.00 0.00 3.55
3983 4089 2.513753 TCAATACAAGGCCACCAACAG 58.486 47.619 5.01 0.00 0.00 3.16
3984 4090 2.666272 TCAATACAAGGCCACCAACA 57.334 45.000 5.01 0.00 0.00 3.33
3985 4091 2.417243 GCATCAATACAAGGCCACCAAC 60.417 50.000 5.01 0.00 0.00 3.77
3986 4092 1.824230 GCATCAATACAAGGCCACCAA 59.176 47.619 5.01 0.00 0.00 3.67
3987 4093 1.272369 TGCATCAATACAAGGCCACCA 60.272 47.619 5.01 0.00 0.00 4.17
3988 4094 1.473258 TGCATCAATACAAGGCCACC 58.527 50.000 5.01 0.00 0.00 4.61
3989 4095 3.591196 TTTGCATCAATACAAGGCCAC 57.409 42.857 5.01 0.00 0.00 5.01
3990 4096 4.020396 ACATTTTGCATCAATACAAGGCCA 60.020 37.500 5.01 0.00 0.00 5.36
3991 4097 4.506758 ACATTTTGCATCAATACAAGGCC 58.493 39.130 0.00 0.00 0.00 5.19
3992 4098 7.775397 AATACATTTTGCATCAATACAAGGC 57.225 32.000 0.00 0.00 0.00 4.35
4014 4120 9.408648 CCCTTATACAAGACCACTATCAAAAAT 57.591 33.333 0.00 0.00 33.20 1.82
4015 4121 8.607713 TCCCTTATACAAGACCACTATCAAAAA 58.392 33.333 0.00 0.00 33.20 1.94
4016 4122 8.153221 TCCCTTATACAAGACCACTATCAAAA 57.847 34.615 0.00 0.00 33.20 2.44
4017 4123 7.743116 TCCCTTATACAAGACCACTATCAAA 57.257 36.000 0.00 0.00 33.20 2.69
4018 4124 7.743116 TTCCCTTATACAAGACCACTATCAA 57.257 36.000 0.00 0.00 33.20 2.57
4019 4125 7.202093 CCATTCCCTTATACAAGACCACTATCA 60.202 40.741 0.00 0.00 33.20 2.15
4020 4126 7.016268 TCCATTCCCTTATACAAGACCACTATC 59.984 40.741 0.00 0.00 33.20 2.08
4021 4127 6.849697 TCCATTCCCTTATACAAGACCACTAT 59.150 38.462 0.00 0.00 33.20 2.12
4022 4128 6.206787 TCCATTCCCTTATACAAGACCACTA 58.793 40.000 0.00 0.00 33.20 2.74
4023 4129 5.036916 TCCATTCCCTTATACAAGACCACT 58.963 41.667 0.00 0.00 33.20 4.00
4024 4130 5.367945 TCCATTCCCTTATACAAGACCAC 57.632 43.478 0.00 0.00 33.20 4.16
4025 4131 4.412199 CCTCCATTCCCTTATACAAGACCA 59.588 45.833 0.00 0.00 33.20 4.02
4026 4132 4.202472 CCCTCCATTCCCTTATACAAGACC 60.202 50.000 0.00 0.00 33.20 3.85
4027 4133 4.658901 TCCCTCCATTCCCTTATACAAGAC 59.341 45.833 0.00 0.00 33.20 3.01
4028 4134 4.903149 TCCCTCCATTCCCTTATACAAGA 58.097 43.478 0.00 0.00 33.20 3.02
4029 4135 4.660771 ACTCCCTCCATTCCCTTATACAAG 59.339 45.833 0.00 0.00 0.00 3.16
4030 4136 4.641868 ACTCCCTCCATTCCCTTATACAA 58.358 43.478 0.00 0.00 0.00 2.41
4031 4137 4.295905 ACTCCCTCCATTCCCTTATACA 57.704 45.455 0.00 0.00 0.00 2.29
4032 4138 7.190501 ACTATACTCCCTCCATTCCCTTATAC 58.809 42.308 0.00 0.00 0.00 1.47
4033 4139 7.372060 ACTATACTCCCTCCATTCCCTTATA 57.628 40.000 0.00 0.00 0.00 0.98
4034 4140 6.248080 ACTATACTCCCTCCATTCCCTTAT 57.752 41.667 0.00 0.00 0.00 1.73
4035 4141 5.698369 ACTATACTCCCTCCATTCCCTTA 57.302 43.478 0.00 0.00 0.00 2.69
4036 4142 4.578149 ACTATACTCCCTCCATTCCCTT 57.422 45.455 0.00 0.00 0.00 3.95
4037 4143 4.578149 AACTATACTCCCTCCATTCCCT 57.422 45.455 0.00 0.00 0.00 4.20
4038 4144 5.648330 AAAACTATACTCCCTCCATTCCC 57.352 43.478 0.00 0.00 0.00 3.97
4039 4145 6.659824 TGAAAAACTATACTCCCTCCATTCC 58.340 40.000 0.00 0.00 0.00 3.01
4040 4146 8.575649 TTTGAAAAACTATACTCCCTCCATTC 57.424 34.615 0.00 0.00 0.00 2.67
4041 4147 8.950007 TTTTGAAAAACTATACTCCCTCCATT 57.050 30.769 0.00 0.00 0.00 3.16
4042 4148 8.950007 TTTTTGAAAAACTATACTCCCTCCAT 57.050 30.769 0.00 0.00 0.00 3.41
4091 4197 2.903135 ACTCCAGGTCCAGAAGAAGAAG 59.097 50.000 0.00 0.00 0.00 2.85
4093 4199 2.110899 AGACTCCAGGTCCAGAAGAAGA 59.889 50.000 0.00 0.00 45.54 2.87
4094 4200 2.233431 CAGACTCCAGGTCCAGAAGAAG 59.767 54.545 0.00 0.00 45.54 2.85
4105 4212 3.347077 AAATGAGCTTCAGACTCCAGG 57.653 47.619 0.00 0.00 32.98 4.45
4152 4259 9.694137 GGATGTGAACTACCTGTAGAATATAAC 57.306 37.037 11.14 2.21 36.97 1.89
4252 4359 2.493035 TCTGAGAAACGCAATGCTTCA 58.507 42.857 2.94 0.00 0.00 3.02
4253 4360 3.486542 GGATCTGAGAAACGCAATGCTTC 60.487 47.826 2.94 1.05 0.00 3.86
4359 4466 8.999431 GTTTACAGAGTGTCATAAATCTCCAAA 58.001 33.333 0.00 0.00 0.00 3.28
4557 4664 5.231779 TGCTCAAATTTGTGTTGATTGTTCG 59.768 36.000 17.47 0.00 34.59 3.95
4575 4682 7.994425 TCCATGTAGAAATAAAACTGCTCAA 57.006 32.000 0.00 0.00 0.00 3.02
4578 4685 8.409358 AACTTCCATGTAGAAATAAAACTGCT 57.591 30.769 0.00 0.00 0.00 4.24
4626 4733 2.031870 GGCTTGTTTTCTCCCTGTTGT 58.968 47.619 0.00 0.00 0.00 3.32
4633 4740 4.058124 GTTTCCAATGGCTTGTTTTCTCC 58.942 43.478 0.00 0.00 0.00 3.71
4675 4782 5.723887 ACAATTACCTCCAGATCTCTGTTCT 59.276 40.000 6.46 0.00 42.27 3.01
4712 4819 1.749258 GAAACATCCCCACCTCGCC 60.749 63.158 0.00 0.00 0.00 5.54
4713 4820 0.539986 TAGAAACATCCCCACCTCGC 59.460 55.000 0.00 0.00 0.00 5.03
4930 5037 2.659428 AGCTCTTCTTTTGTTGCCAGT 58.341 42.857 0.00 0.00 0.00 4.00
4987 5094 7.921786 TTCCACTGAAATAATGTAGTCAAGG 57.078 36.000 0.00 0.00 0.00 3.61
5597 5704 6.681368 GCCCATCAGGTGCTCTAATTTTTAAG 60.681 42.308 0.00 0.00 38.26 1.85
5624 5731 1.003331 ACACATAAAACACACGTGCGG 60.003 47.619 17.22 11.07 0.00 5.69
5683 5790 6.670617 AGATACTCCTGCACTAAACTAGGTA 58.329 40.000 0.00 0.00 0.00 3.08
5687 5794 5.594725 CCTGAGATACTCCTGCACTAAACTA 59.405 44.000 0.00 0.00 0.00 2.24
5749 5856 9.959721 ATAGAGCTATTCCAAACTGACTTTAAA 57.040 29.630 0.00 0.00 0.00 1.52
5834 5941 6.041069 CAGTGAACATTAACCCCCTTTGTAAA 59.959 38.462 0.00 0.00 0.00 2.01
5842 5949 3.492337 TGTTCAGTGAACATTAACCCCC 58.508 45.455 30.31 5.35 45.88 5.40
5945 6053 8.974060 AGAGTCCTATTAGAAGTAGAGTCTTG 57.026 38.462 0.00 0.00 0.00 3.02
5961 6069 9.401496 AGAGTCCTATTAGAAGTAGAGTCCTAT 57.599 37.037 0.00 0.00 0.00 2.57
5962 6070 8.802057 AGAGTCCTATTAGAAGTAGAGTCCTA 57.198 38.462 0.00 0.00 0.00 2.94
5963 6071 7.701257 AGAGTCCTATTAGAAGTAGAGTCCT 57.299 40.000 0.00 0.00 0.00 3.85
5964 6072 8.756486 AAAGAGTCCTATTAGAAGTAGAGTCC 57.244 38.462 0.00 0.00 0.00 3.85
5968 6076 9.970553 TGTGTAAAGAGTCCTATTAGAAGTAGA 57.029 33.333 0.00 0.00 0.00 2.59
5987 6095 2.027929 CGGTGTATCCAGGGTGTGTAAA 60.028 50.000 0.00 0.00 35.57 2.01
6021 6130 1.099879 CCAGCTGGCTGTTAGATGGC 61.100 60.000 22.33 0.00 43.81 4.40
6042 6151 3.118112 CCCTGTTGTGGCATCTAAGAGAT 60.118 47.826 0.00 0.00 34.74 2.75
6066 6175 0.036483 TCACATGCGCAGGTACACAT 60.036 50.000 28.77 0.00 0.00 3.21
6335 6444 8.270799 GCAATGTGCATGTGATATTTAACATTC 58.729 33.333 0.00 0.00 44.26 2.67
6377 6486 6.653020 AGATGCAAACTCAGTACAATCCATA 58.347 36.000 0.00 0.00 0.00 2.74
6409 6518 2.763215 CTTGGGGTGCCTTGCCTA 59.237 61.111 0.00 0.00 0.00 3.93
6419 6528 1.417890 CGCATATCTCTTCCTTGGGGT 59.582 52.381 0.00 0.00 0.00 4.95
6478 6587 6.318913 TGGGTTTTCATAAAAGGATTCCTCA 58.681 36.000 5.48 0.00 30.89 3.86
6553 6662 3.116096 AGAGGACAGTGGCATACCTTA 57.884 47.619 0.00 0.00 36.63 2.69
6612 6722 6.826668 TGTCAGAAGGTTGAAGAGACAAATA 58.173 36.000 0.00 0.00 32.26 1.40
6613 6723 5.684704 TGTCAGAAGGTTGAAGAGACAAAT 58.315 37.500 0.00 0.00 32.26 2.32
6627 6791 6.867662 ACTTTTCATGTAGTTGTCAGAAGG 57.132 37.500 0.00 0.00 0.00 3.46
6657 6821 9.930693 CTTTTTCTGTACTTAGGTCTTCATACT 57.069 33.333 0.00 0.00 0.00 2.12
6725 6889 2.042261 TCTAGGGTGGGAAGGGGC 59.958 66.667 0.00 0.00 0.00 5.80
6726 6890 0.253207 AACTCTAGGGTGGGAAGGGG 60.253 60.000 0.00 0.00 0.00 4.79
6751 6916 3.754965 TCACAGGCAAGCTAGAACAAAT 58.245 40.909 0.00 0.00 0.00 2.32
6821 6986 8.961294 AAAATCTCAATCAGAGTCATAGAAGG 57.039 34.615 0.00 0.00 44.98 3.46
6859 7024 4.881273 GTGTATGCATAACAACCTCATGGA 59.119 41.667 8.28 0.00 37.04 3.41
6891 7062 6.573664 ATGAGCAGCAACTACAACATAAAA 57.426 33.333 0.00 0.00 0.00 1.52
7022 7225 4.082463 GGCATCACTAGAGCTCCAGTATAC 60.082 50.000 14.70 5.09 0.00 1.47
7066 7309 2.424246 TGTGAACGCGTCATGGAGTATA 59.576 45.455 14.44 0.00 38.90 1.47
7089 7332 2.355010 ATTATGCCCTTGCCTGACTC 57.645 50.000 0.00 0.00 36.33 3.36
7106 7349 9.218525 TCTTACATCTAGATCAGGGAAAGAATT 57.781 33.333 1.03 0.00 0.00 2.17
7183 7434 3.877559 TGACTGGCAATGAACTGATAGG 58.122 45.455 0.00 0.00 0.00 2.57
7241 7492 3.980775 ACACATAAATGCACGTTTGAAGC 59.019 39.130 0.00 0.00 0.00 3.86
7261 7512 3.306472 AACAACTTCCAGGCCTAAACA 57.694 42.857 3.98 0.00 0.00 2.83
7290 7541 2.832129 AGATCTAAAGGTGCCTTCGTGA 59.168 45.455 3.70 3.94 34.84 4.35
7292 7543 2.832129 TCAGATCTAAAGGTGCCTTCGT 59.168 45.455 3.70 0.00 34.84 3.85
7293 7544 3.526931 TCAGATCTAAAGGTGCCTTCG 57.473 47.619 3.70 0.00 34.84 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.