Multiple sequence alignment - TraesCS2B01G369300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G369300 chr2B 100.000 3880 0 0 1 3880 526761654 526765533 0.000000e+00 7166
1 TraesCS2B01G369300 chr2B 76.981 1186 234 28 1714 2880 526776245 526777410 3.270000e-180 641
2 TraesCS2B01G369300 chr2B 82.382 613 64 32 3100 3709 474360448 474359877 9.680000e-136 494
3 TraesCS2B01G369300 chr2B 91.148 305 24 3 3412 3716 120240 120541 1.000000e-110 411
4 TraesCS2B01G369300 chr2B 86.702 376 29 5 3034 3390 119883 120256 7.810000e-107 398
5 TraesCS2B01G369300 chr2B 97.207 179 4 1 1409 1586 89545514 89545336 6.300000e-78 302
6 TraesCS2B01G369300 chr2B 80.620 258 42 8 2312 2565 650354085 650354338 3.960000e-45 193
7 TraesCS2B01G369300 chr2B 73.601 572 111 31 2312 2875 526841635 526842174 2.380000e-42 183
8 TraesCS2B01G369300 chr2D 95.480 1438 51 10 1584 3015 446859053 446857624 0.000000e+00 2283
9 TraesCS2B01G369300 chr2D 85.402 1144 76 35 305 1409 446860137 446859046 0.000000e+00 1103
10 TraesCS2B01G369300 chr2D 85.735 687 66 24 3034 3715 492678162 492678821 0.000000e+00 697
11 TraesCS2B01G369300 chr2D 77.242 1182 232 25 1714 2880 446942045 446943204 0.000000e+00 658
12 TraesCS2B01G369300 chr2D 91.749 303 22 2 3412 3714 38740665 38740964 6.000000e-113 418
13 TraesCS2B01G369300 chr2D 81.557 488 78 8 1717 2201 447149093 447149571 3.630000e-105 392
14 TraesCS2B01G369300 chr2D 85.067 375 27 11 3034 3390 38740318 38740681 4.770000e-94 355
15 TraesCS2B01G369300 chr2D 74.606 571 109 27 2311 2875 447149698 447150238 6.530000e-53 219
16 TraesCS2B01G369300 chr2D 80.147 272 48 6 2312 2580 544660789 544661057 8.500000e-47 198
17 TraesCS2B01G369300 chr2A 95.404 1349 38 11 1668 3010 591264482 591265812 0.000000e+00 2126
18 TraesCS2B01G369300 chr2A 83.196 1452 134 51 3 1409 591261204 591262590 0.000000e+00 1229
19 TraesCS2B01G369300 chr2A 77.787 1193 226 24 1703 2880 591278007 591279175 0.000000e+00 699
20 TraesCS2B01G369300 chr2A 74.096 857 186 30 1717 2565 686867398 686868226 1.740000e-83 320
21 TraesCS2B01G369300 chr2A 73.462 569 117 26 2312 2875 591605517 591606056 2.380000e-42 183
22 TraesCS2B01G369300 chr2A 96.341 82 3 0 1584 1665 591262583 591262664 6.760000e-28 135
23 TraesCS2B01G369300 chr5A 78.535 1188 198 35 1713 2880 582980959 582982109 0.000000e+00 728
24 TraesCS2B01G369300 chr5A 83.777 376 30 13 3034 3390 482515739 482516102 1.040000e-85 327
25 TraesCS2B01G369300 chr5D 78.469 1189 196 38 1713 2880 463087466 463088615 0.000000e+00 723
26 TraesCS2B01G369300 chr7D 85.227 704 64 30 3023 3718 406907426 406906755 0.000000e+00 688
27 TraesCS2B01G369300 chr7D 87.368 380 29 4 3030 3390 34070163 34069784 6.000000e-113 418
28 TraesCS2B01G369300 chr5B 77.862 1188 196 39 1713 2880 569825564 569826704 0.000000e+00 675
29 TraesCS2B01G369300 chr5B 94.527 201 9 2 1392 1591 363665283 363665482 3.760000e-80 309
30 TraesCS2B01G369300 chr5B 95.238 189 7 2 1404 1591 346616344 346616157 8.150000e-77 298
31 TraesCS2B01G369300 chr5B 94.330 194 11 0 1401 1594 589201214 589201021 8.150000e-77 298
32 TraesCS2B01G369300 chr7B 93.611 360 21 2 3033 3390 739440849 739441208 1.590000e-148 536
33 TraesCS2B01G369300 chr7B 94.079 304 15 3 3412 3714 739441192 739441493 3.530000e-125 459
34 TraesCS2B01G369300 chr7B 85.638 376 23 10 3031 3390 640235387 640235027 2.200000e-97 366
35 TraesCS2B01G369300 chr7B 96.257 187 7 0 1404 1590 632274158 632273972 1.350000e-79 307
36 TraesCS2B01G369300 chr7B 94.792 192 8 2 1403 1592 617829119 617829310 8.150000e-77 298
37 TraesCS2B01G369300 chr7B 83.684 190 26 3 35 224 56979734 56979918 1.430000e-39 174
38 TraesCS2B01G369300 chr6B 90.181 387 34 4 3330 3715 703275628 703275245 5.790000e-138 501
39 TraesCS2B01G369300 chr6B 95.238 189 9 0 1403 1591 636490826 636490638 2.270000e-77 300
40 TraesCS2B01G369300 chr6B 83.237 173 27 2 3 175 172578566 172578396 1.440000e-34 158
41 TraesCS2B01G369300 chr7A 88.187 364 34 7 3034 3390 575457892 575458253 3.580000e-115 425
42 TraesCS2B01G369300 chr7A 90.132 304 22 7 3412 3715 575458237 575458532 4.700000e-104 388
43 TraesCS2B01G369300 chr1B 91.083 314 23 4 3412 3723 532543227 532542917 1.670000e-113 420
44 TraesCS2B01G369300 chr1B 86.458 384 34 5 3022 3390 532543591 532543211 4.670000e-109 405
45 TraesCS2B01G369300 chr6A 86.723 354 28 8 3034 3368 600393462 600393815 3.660000e-100 375
46 TraesCS2B01G369300 chr1A 85.450 378 31 14 3033 3388 117932220 117932595 4.730000e-99 372
47 TraesCS2B01G369300 chr4A 82.275 378 47 15 3024 3390 36610895 36611263 3.760000e-80 309
48 TraesCS2B01G369300 chr4B 97.191 178 5 0 1407 1584 606181259 606181082 6.300000e-78 302
49 TraesCS2B01G369300 chr4B 94.301 193 7 2 1402 1592 667572094 667571904 3.790000e-75 292


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G369300 chr2B 526761654 526765533 3879 False 7166.000000 7166 100.0000 1 3880 1 chr2B.!!$F1 3879
1 TraesCS2B01G369300 chr2B 526776245 526777410 1165 False 641.000000 641 76.9810 1714 2880 1 chr2B.!!$F2 1166
2 TraesCS2B01G369300 chr2B 474359877 474360448 571 True 494.000000 494 82.3820 3100 3709 1 chr2B.!!$R2 609
3 TraesCS2B01G369300 chr2B 119883 120541 658 False 404.500000 411 88.9250 3034 3716 2 chr2B.!!$F5 682
4 TraesCS2B01G369300 chr2D 446857624 446860137 2513 True 1693.000000 2283 90.4410 305 3015 2 chr2D.!!$R1 2710
5 TraesCS2B01G369300 chr2D 492678162 492678821 659 False 697.000000 697 85.7350 3034 3715 1 chr2D.!!$F2 681
6 TraesCS2B01G369300 chr2D 446942045 446943204 1159 False 658.000000 658 77.2420 1714 2880 1 chr2D.!!$F1 1166
7 TraesCS2B01G369300 chr2D 38740318 38740964 646 False 386.500000 418 88.4080 3034 3714 2 chr2D.!!$F4 680
8 TraesCS2B01G369300 chr2D 447149093 447150238 1145 False 305.500000 392 78.0815 1717 2875 2 chr2D.!!$F5 1158
9 TraesCS2B01G369300 chr2A 591261204 591265812 4608 False 1163.333333 2126 91.6470 3 3010 3 chr2A.!!$F4 3007
10 TraesCS2B01G369300 chr2A 591278007 591279175 1168 False 699.000000 699 77.7870 1703 2880 1 chr2A.!!$F1 1177
11 TraesCS2B01G369300 chr2A 686867398 686868226 828 False 320.000000 320 74.0960 1717 2565 1 chr2A.!!$F3 848
12 TraesCS2B01G369300 chr5A 582980959 582982109 1150 False 728.000000 728 78.5350 1713 2880 1 chr5A.!!$F2 1167
13 TraesCS2B01G369300 chr5D 463087466 463088615 1149 False 723.000000 723 78.4690 1713 2880 1 chr5D.!!$F1 1167
14 TraesCS2B01G369300 chr7D 406906755 406907426 671 True 688.000000 688 85.2270 3023 3718 1 chr7D.!!$R2 695
15 TraesCS2B01G369300 chr5B 569825564 569826704 1140 False 675.000000 675 77.8620 1713 2880 1 chr5B.!!$F2 1167
16 TraesCS2B01G369300 chr7B 739440849 739441493 644 False 497.500000 536 93.8450 3033 3714 2 chr7B.!!$F3 681
17 TraesCS2B01G369300 chr7A 575457892 575458532 640 False 406.500000 425 89.1595 3034 3715 2 chr7A.!!$F1 681
18 TraesCS2B01G369300 chr1B 532542917 532543591 674 True 412.500000 420 88.7705 3022 3723 2 chr1B.!!$R1 701

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
727 736 0.032267 GACCGATCGAATCAGGGACC 59.968 60.0 18.66 0.00 0.00 4.46 F
729 738 0.032678 CCGATCGAATCAGGGACCTG 59.967 60.0 18.66 12.16 44.86 4.00 F
1252 1333 0.103937 CCAGCCTGCTAGCTAGTGTC 59.896 60.0 21.62 6.28 42.61 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1637 1737 0.098025 AACACAAACAGTCAACGCCG 59.902 50.000 0.00 0.0 0.00 6.46 R
2723 4737 0.387929 TATGGATCGCCGTGAACTCC 59.612 55.000 0.00 0.0 36.79 3.85 R
2921 4937 1.064017 ACCCTGTGTTTCAGAGGCAAA 60.064 47.619 7.32 0.0 42.66 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 4.006319 GGTGCTAGTTTTGCTTCTCTCAT 58.994 43.478 0.00 0.00 0.00 2.90
45 46 5.703130 AGTTTTGCTTCTCTCATGGTTACTC 59.297 40.000 0.00 0.00 0.00 2.59
54 55 5.013079 TCTCTCATGGTTACTCATGTTGGTT 59.987 40.000 11.51 0.00 43.52 3.67
71 72 3.855668 TGGTTGGGATTCAAATGTTCCT 58.144 40.909 0.00 0.00 37.08 3.36
72 73 4.230455 TGGTTGGGATTCAAATGTTCCTT 58.770 39.130 0.00 0.00 37.08 3.36
73 74 4.657969 TGGTTGGGATTCAAATGTTCCTTT 59.342 37.500 0.00 0.00 37.08 3.11
79 80 5.343249 GGATTCAAATGTTCCTTTCCATCG 58.657 41.667 0.00 0.00 0.00 3.84
82 83 3.505680 TCAAATGTTCCTTTCCATCGGTG 59.494 43.478 0.00 0.00 0.00 4.94
87 88 0.321564 TCCTTTCCATCGGTGTGCTG 60.322 55.000 0.00 0.00 0.00 4.41
103 104 0.386838 GCTGGCTTTGCTTGTTCACT 59.613 50.000 0.00 0.00 0.00 3.41
113 114 1.336240 GCTTGTTCACTTGATGGCACC 60.336 52.381 0.00 0.00 0.00 5.01
116 117 1.234821 GTTCACTTGATGGCACCGAA 58.765 50.000 0.00 0.00 0.00 4.30
143 144 3.253230 GCGTGATGCAAGCCTAAATTTT 58.747 40.909 0.00 0.00 45.45 1.82
149 150 7.293018 GTGATGCAAGCCTAAATTTTCTTTTG 58.707 34.615 0.00 0.00 0.00 2.44
160 161 8.459635 CCTAAATTTTCTTTTGTCTAGCCTACC 58.540 37.037 0.00 0.00 0.00 3.18
182 183 3.869246 CGGCAGATTGTAACCTTACGATT 59.131 43.478 0.00 0.00 37.77 3.34
183 184 5.045215 CGGCAGATTGTAACCTTACGATTA 58.955 41.667 0.00 0.00 37.77 1.75
184 185 5.521010 CGGCAGATTGTAACCTTACGATTAA 59.479 40.000 0.00 0.00 37.77 1.40
185 186 6.202188 CGGCAGATTGTAACCTTACGATTAAT 59.798 38.462 0.00 0.00 37.77 1.40
186 187 7.383029 CGGCAGATTGTAACCTTACGATTAATA 59.617 37.037 0.00 0.00 37.77 0.98
212 213 9.573133 ACTTCATTAATAAAGCTTCCAATTTCG 57.427 29.630 0.00 0.00 0.00 3.46
216 217 9.352784 CATTAATAAAGCTTCCAATTTCGTTGA 57.647 29.630 0.00 0.00 40.37 3.18
251 252 6.552350 AGGTGCATTCATATTTAGGCAAATCT 59.448 34.615 0.00 0.00 35.88 2.40
259 260 9.561069 TTCATATTTAGGCAAATCTAAGTCCTC 57.439 33.333 0.00 0.00 35.88 3.71
274 275 4.903045 AGTCCTCTAATTTTGGAACGGA 57.097 40.909 0.00 0.00 0.00 4.69
280 281 5.353400 CCTCTAATTTTGGAACGGAGGTAAC 59.647 44.000 0.00 0.00 35.50 2.50
286 287 6.503589 TTTTGGAACGGAGGTAACATTATG 57.496 37.500 0.00 0.00 41.41 1.90
287 288 4.145365 TGGAACGGAGGTAACATTATGG 57.855 45.455 0.00 0.00 41.41 2.74
289 290 4.019141 TGGAACGGAGGTAACATTATGGTT 60.019 41.667 0.00 0.00 41.41 3.67
290 291 4.573607 GGAACGGAGGTAACATTATGGTTC 59.426 45.833 0.00 0.00 41.41 3.62
291 292 4.146745 ACGGAGGTAACATTATGGTTCC 57.853 45.455 0.00 0.00 41.41 3.62
292 293 3.778629 ACGGAGGTAACATTATGGTTCCT 59.221 43.478 8.18 8.18 41.41 3.36
293 294 4.127171 CGGAGGTAACATTATGGTTCCTG 58.873 47.826 13.15 0.00 41.41 3.86
299 302 8.943594 AGGTAACATTATGGTTCCTGTTTTTA 57.056 30.769 7.64 0.00 41.41 1.52
387 390 1.576421 CCAAAGTTGACTCCAGCGC 59.424 57.895 0.00 0.00 0.00 5.92
389 392 0.886490 CAAAGTTGACTCCAGCGCCT 60.886 55.000 2.29 0.00 0.00 5.52
459 464 0.245266 TGATGCCACTGCTGCAAATG 59.755 50.000 3.02 5.18 42.92 2.32
479 484 7.062605 GCAAATGAAAATCCACATGAACACTAG 59.937 37.037 0.00 0.00 0.00 2.57
521 526 0.671781 CCCAGCCAATCGATCGATCC 60.672 60.000 29.48 19.89 33.08 3.36
637 646 7.907045 ACTACGTCGTACTACAAACTGATAATG 59.093 37.037 0.00 0.00 0.00 1.90
679 688 2.501650 CGCACGACGGCCATTTTG 60.502 61.111 2.24 0.00 38.44 2.44
727 736 0.032267 GACCGATCGAATCAGGGACC 59.968 60.000 18.66 0.00 0.00 4.46
728 737 0.397254 ACCGATCGAATCAGGGACCT 60.397 55.000 18.66 0.00 0.00 3.85
729 738 0.032678 CCGATCGAATCAGGGACCTG 59.967 60.000 18.66 12.16 44.86 4.00
745 754 1.305633 CTGCAGGTGGAGAGGAGGA 60.306 63.158 5.57 0.00 35.31 3.71
840 849 3.437795 CGCGTACACCGACCTCCT 61.438 66.667 0.00 0.00 39.56 3.69
841 850 2.181021 GCGTACACCGACCTCCTG 59.819 66.667 0.00 0.00 39.56 3.86
940 987 4.444536 ACGTAGAAGCTCGAGAGAACTAT 58.555 43.478 18.75 0.00 41.32 2.12
948 995 4.464597 AGCTCGAGAGAACTATTCCAAAGT 59.535 41.667 18.75 0.00 41.32 2.66
950 997 5.715070 CTCGAGAGAACTATTCCAAAGTGT 58.285 41.667 6.58 0.00 41.32 3.55
954 1001 6.570571 CGAGAGAACTATTCCAAAGTGTGAGA 60.571 42.308 0.00 0.00 0.00 3.27
997 1052 2.726351 GGAGGTGAAGAGCGGGAGG 61.726 68.421 0.00 0.00 0.00 4.30
1006 1061 2.039624 AGCGGGAGGAGATGGTGT 59.960 61.111 0.00 0.00 0.00 4.16
1021 1076 4.927782 TGTTCAAGGGCGCGCTGT 62.928 61.111 32.29 15.92 0.00 4.40
1076 1131 3.390521 AGCCGGCGATGGTGAGAA 61.391 61.111 23.20 0.00 0.00 2.87
1078 1133 2.579201 CCGGCGATGGTGAGAACT 59.421 61.111 9.30 0.00 0.00 3.01
1079 1134 1.811266 CCGGCGATGGTGAGAACTG 60.811 63.158 9.30 0.00 0.00 3.16
1080 1135 1.215382 CGGCGATGGTGAGAACTGA 59.785 57.895 0.00 0.00 0.00 3.41
1081 1136 0.803768 CGGCGATGGTGAGAACTGAG 60.804 60.000 0.00 0.00 0.00 3.35
1085 1140 2.353208 GCGATGGTGAGAACTGAGAACT 60.353 50.000 0.00 0.00 0.00 3.01
1087 1142 3.057245 CGATGGTGAGAACTGAGAACTCA 60.057 47.826 4.45 4.45 38.16 3.41
1091 1146 3.735237 TGAGAACTGAGAACTCACCAC 57.265 47.619 8.59 0.00 36.04 4.16
1092 1147 3.031013 TGAGAACTGAGAACTCACCACA 58.969 45.455 8.59 0.00 36.04 4.17
1093 1148 3.181475 TGAGAACTGAGAACTCACCACAC 60.181 47.826 8.59 0.00 36.04 3.82
1094 1149 2.766263 AGAACTGAGAACTCACCACACA 59.234 45.455 0.00 0.00 35.46 3.72
1095 1150 2.604046 ACTGAGAACTCACCACACAC 57.396 50.000 0.00 0.00 35.46 3.82
1096 1151 1.831106 ACTGAGAACTCACCACACACA 59.169 47.619 0.00 0.00 35.46 3.72
1099 1154 3.879295 CTGAGAACTCACCACACACAAAT 59.121 43.478 0.00 0.00 35.46 2.32
1100 1155 4.269183 TGAGAACTCACCACACACAAATT 58.731 39.130 0.00 0.00 34.14 1.82
1109 1164 4.867047 CACCACACACAAATTGTTGCTTAA 59.133 37.500 0.00 0.00 38.39 1.85
1110 1165 4.867608 ACCACACACAAATTGTTGCTTAAC 59.132 37.500 0.00 0.00 38.39 2.01
1133 1198 4.082192 CATGCATGCTTGGTTCGC 57.918 55.556 22.49 0.00 0.00 4.70
1134 1199 1.509463 CATGCATGCTTGGTTCGCT 59.491 52.632 22.49 0.00 0.00 4.93
1135 1200 0.734309 CATGCATGCTTGGTTCGCTA 59.266 50.000 22.49 0.00 0.00 4.26
1136 1201 1.335810 CATGCATGCTTGGTTCGCTAT 59.664 47.619 22.49 0.05 0.00 2.97
1137 1202 0.734309 TGCATGCTTGGTTCGCTATG 59.266 50.000 20.33 0.00 0.00 2.23
1158 1223 4.991776 TGTAATTTGGTGGAGTGGAATGA 58.008 39.130 0.00 0.00 0.00 2.57
1159 1224 5.009631 TGTAATTTGGTGGAGTGGAATGAG 58.990 41.667 0.00 0.00 0.00 2.90
1160 1225 3.814504 ATTTGGTGGAGTGGAATGAGT 57.185 42.857 0.00 0.00 0.00 3.41
1174 1239 3.862267 GGAATGAGTGACTGTCAGATTCG 59.138 47.826 11.41 0.00 0.00 3.34
1177 1242 5.843673 ATGAGTGACTGTCAGATTCGTAT 57.156 39.130 11.41 0.00 0.00 3.06
1178 1243 5.236655 TGAGTGACTGTCAGATTCGTATC 57.763 43.478 11.41 0.00 0.00 2.24
1180 1245 2.784380 GTGACTGTCAGATTCGTATCGC 59.216 50.000 11.41 0.00 35.85 4.58
1194 1259 2.787129 CGTATCGCGAGACTAATTTGCA 59.213 45.455 28.84 0.00 46.97 4.08
1203 1268 5.115622 GCGAGACTAATTTGCAAACTTGTTC 59.884 40.000 15.41 9.86 0.00 3.18
1204 1269 5.625311 CGAGACTAATTTGCAAACTTGTTCC 59.375 40.000 15.41 5.97 0.00 3.62
1228 1299 4.789119 CGTCTTCTCGATGTTCTTAGTGAC 59.211 45.833 0.00 0.00 0.00 3.67
1249 1330 1.053264 ATGCCAGCCTGCTAGCTAGT 61.053 55.000 21.62 0.00 42.61 2.57
1250 1331 1.227497 GCCAGCCTGCTAGCTAGTG 60.227 63.158 21.62 14.27 42.61 2.74
1252 1333 0.103937 CCAGCCTGCTAGCTAGTGTC 59.896 60.000 21.62 6.28 42.61 3.67
1253 1334 0.248825 CAGCCTGCTAGCTAGTGTCG 60.249 60.000 21.62 8.44 42.61 4.35
1254 1335 1.066587 GCCTGCTAGCTAGTGTCGG 59.933 63.158 21.62 16.28 0.00 4.79
1264 1361 6.183360 TGCTAGCTAGTGTCGGGTTAATTAAT 60.183 38.462 21.62 0.00 0.00 1.40
1268 1365 5.818857 GCTAGTGTCGGGTTAATTAATTCCA 59.181 40.000 3.39 0.00 0.00 3.53
1273 1370 7.281549 AGTGTCGGGTTAATTAATTCCATGTAC 59.718 37.037 3.39 0.00 0.00 2.90
1274 1371 7.281549 GTGTCGGGTTAATTAATTCCATGTACT 59.718 37.037 3.39 0.00 0.00 2.73
1277 1374 9.550406 TCGGGTTAATTAATTCCATGTACTAAG 57.450 33.333 3.39 2.79 0.00 2.18
1278 1375 9.550406 CGGGTTAATTAATTCCATGTACTAAGA 57.450 33.333 3.39 0.00 0.00 2.10
1295 1392 9.101655 TGTACTAAGAAAGTTGGTTTAGTGTTC 57.898 33.333 13.22 7.49 39.80 3.18
1314 1411 1.121850 CATTGTCACGCGATTGCACG 61.122 55.000 15.93 0.00 42.97 5.34
1318 1415 4.147322 CACGCGATTGCACGGGAC 62.147 66.667 15.93 0.00 46.30 4.46
1320 1417 3.853330 CGCGATTGCACGGGACTG 61.853 66.667 0.00 0.00 46.30 3.51
1340 1440 6.254281 ACTGGTGTCAGCATAATTTGTTAC 57.746 37.500 4.95 0.00 44.59 2.50
1341 1441 5.106712 ACTGGTGTCAGCATAATTTGTTACG 60.107 40.000 4.95 0.00 44.59 3.18
1342 1442 4.998033 TGGTGTCAGCATAATTTGTTACGA 59.002 37.500 0.00 0.00 0.00 3.43
1343 1443 5.121611 TGGTGTCAGCATAATTTGTTACGAG 59.878 40.000 0.00 0.00 0.00 4.18
1344 1444 5.022021 GTGTCAGCATAATTTGTTACGAGC 58.978 41.667 0.00 0.00 0.00 5.03
1345 1445 4.201676 TGTCAGCATAATTTGTTACGAGCG 60.202 41.667 0.00 0.00 0.00 5.03
1382 1482 9.355916 TGTAATAGCTCAGCTTAGATTTAGAGA 57.644 33.333 3.31 0.00 40.44 3.10
1403 1503 5.134661 AGAGGCTACTAAGATTAGCGAACT 58.865 41.667 0.00 0.00 42.57 3.01
1404 1504 5.595133 AGAGGCTACTAAGATTAGCGAACTT 59.405 40.000 0.00 0.00 42.57 2.66
1405 1505 6.097129 AGAGGCTACTAAGATTAGCGAACTTT 59.903 38.462 0.00 0.00 42.57 2.66
1406 1506 6.641474 AGGCTACTAAGATTAGCGAACTTTT 58.359 36.000 0.00 0.00 42.57 2.27
1407 1507 7.104290 AGGCTACTAAGATTAGCGAACTTTTT 58.896 34.615 0.00 0.00 42.57 1.94
1408 1508 8.255905 AGGCTACTAAGATTAGCGAACTTTTTA 58.744 33.333 0.00 0.00 42.57 1.52
1409 1509 8.326713 GGCTACTAAGATTAGCGAACTTTTTAC 58.673 37.037 0.00 0.00 42.57 2.01
1410 1510 8.866956 GCTACTAAGATTAGCGAACTTTTTACA 58.133 33.333 0.00 0.00 33.03 2.41
1412 1512 8.828688 ACTAAGATTAGCGAACTTTTTACAGT 57.171 30.769 0.00 0.00 34.09 3.55
1413 1513 9.269453 ACTAAGATTAGCGAACTTTTTACAGTT 57.731 29.630 0.00 0.00 35.61 3.16
1416 1516 8.782533 AGATTAGCGAACTTTTTACAGTTTTG 57.217 30.769 0.00 0.00 37.11 2.44
1417 1517 6.799786 TTAGCGAACTTTTTACAGTTTTGC 57.200 33.333 0.00 0.00 37.11 3.68
1418 1518 4.993905 AGCGAACTTTTTACAGTTTTGCT 58.006 34.783 7.89 7.89 40.84 3.91
1419 1519 6.126568 AGCGAACTTTTTACAGTTTTGCTA 57.873 33.333 10.69 0.00 42.41 3.49
1420 1520 6.199393 AGCGAACTTTTTACAGTTTTGCTAG 58.801 36.000 10.69 0.00 42.41 3.42
1421 1521 6.037830 AGCGAACTTTTTACAGTTTTGCTAGA 59.962 34.615 10.69 0.00 42.41 2.43
1422 1522 6.689669 GCGAACTTTTTACAGTTTTGCTAGAA 59.310 34.615 0.00 0.00 37.11 2.10
1423 1523 7.305247 GCGAACTTTTTACAGTTTTGCTAGAAC 60.305 37.037 0.00 0.00 37.11 3.01
1424 1524 7.908601 CGAACTTTTTACAGTTTTGCTAGAACT 59.091 33.333 0.00 0.00 37.11 3.01
1425 1525 9.222916 GAACTTTTTACAGTTTTGCTAGAACTC 57.777 33.333 0.00 0.00 37.11 3.01
1426 1526 8.276252 ACTTTTTACAGTTTTGCTAGAACTCA 57.724 30.769 0.00 0.00 35.26 3.41
1427 1527 8.903820 ACTTTTTACAGTTTTGCTAGAACTCAT 58.096 29.630 0.00 0.00 35.26 2.90
1428 1528 9.387123 CTTTTTACAGTTTTGCTAGAACTCATC 57.613 33.333 0.00 0.00 35.26 2.92
1429 1529 8.677148 TTTTACAGTTTTGCTAGAACTCATCT 57.323 30.769 0.00 0.00 42.48 2.90
1430 1530 9.772973 TTTTACAGTTTTGCTAGAACTCATCTA 57.227 29.630 0.00 0.00 39.71 1.98
1480 1580 6.906157 CCTTTTATAGGCATTGGATGTGAT 57.094 37.500 0.00 0.00 37.17 3.06
1481 1581 6.684686 CCTTTTATAGGCATTGGATGTGATG 58.315 40.000 0.00 0.00 37.17 3.07
1482 1582 5.710513 TTTATAGGCATTGGATGTGATGC 57.289 39.130 0.00 0.00 46.03 3.91
1483 1583 3.520691 ATAGGCATTGGATGTGATGCT 57.479 42.857 8.06 0.00 46.01 3.79
1484 1584 4.645863 ATAGGCATTGGATGTGATGCTA 57.354 40.909 8.06 0.76 46.01 3.49
1485 1585 3.520691 AGGCATTGGATGTGATGCTAT 57.479 42.857 8.06 0.00 46.01 2.97
1486 1586 4.645863 AGGCATTGGATGTGATGCTATA 57.354 40.909 8.06 0.00 46.01 1.31
1487 1587 4.989277 AGGCATTGGATGTGATGCTATAA 58.011 39.130 8.06 0.00 46.01 0.98
1488 1588 5.008331 AGGCATTGGATGTGATGCTATAAG 58.992 41.667 8.06 0.00 46.01 1.73
1489 1589 5.005740 GGCATTGGATGTGATGCTATAAGA 58.994 41.667 8.06 0.00 46.01 2.10
1490 1590 5.651139 GGCATTGGATGTGATGCTATAAGAT 59.349 40.000 8.06 0.00 46.01 2.40
1491 1591 6.404403 GGCATTGGATGTGATGCTATAAGATG 60.404 42.308 8.06 0.00 46.01 2.90
1492 1592 6.552629 CATTGGATGTGATGCTATAAGATGC 58.447 40.000 0.00 0.00 0.00 3.91
1493 1593 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
1494 1594 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
1495 1595 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
1496 1596 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
1497 1597 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
1498 1598 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
1499 1599 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
1500 1600 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
1501 1601 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
1502 1602 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
1503 1603 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
1504 1604 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
1505 1605 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
1506 1606 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
1507 1607 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
1508 1608 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
1509 1609 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
1510 1610 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
1511 1611 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
1512 1612 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
1513 1613 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
1514 1614 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
1515 1615 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
1516 1616 1.202710 TGTGCTGACGTGGGTTGTATT 60.203 47.619 0.00 0.00 0.00 1.89
1517 1617 1.877443 GTGCTGACGTGGGTTGTATTT 59.123 47.619 0.00 0.00 0.00 1.40
1518 1618 1.876799 TGCTGACGTGGGTTGTATTTG 59.123 47.619 0.00 0.00 0.00 2.32
1519 1619 1.877443 GCTGACGTGGGTTGTATTTGT 59.123 47.619 0.00 0.00 0.00 2.83
1520 1620 2.292292 GCTGACGTGGGTTGTATTTGTT 59.708 45.455 0.00 0.00 0.00 2.83
1521 1621 3.608474 GCTGACGTGGGTTGTATTTGTTC 60.608 47.826 0.00 0.00 0.00 3.18
1522 1622 3.811083 TGACGTGGGTTGTATTTGTTCT 58.189 40.909 0.00 0.00 0.00 3.01
1523 1623 4.200874 TGACGTGGGTTGTATTTGTTCTT 58.799 39.130 0.00 0.00 0.00 2.52
1524 1624 4.035792 TGACGTGGGTTGTATTTGTTCTTG 59.964 41.667 0.00 0.00 0.00 3.02
1525 1625 3.949113 ACGTGGGTTGTATTTGTTCTTGT 59.051 39.130 0.00 0.00 0.00 3.16
1526 1626 4.399934 ACGTGGGTTGTATTTGTTCTTGTT 59.600 37.500 0.00 0.00 0.00 2.83
1527 1627 5.105675 ACGTGGGTTGTATTTGTTCTTGTTT 60.106 36.000 0.00 0.00 0.00 2.83
1528 1628 5.808030 CGTGGGTTGTATTTGTTCTTGTTTT 59.192 36.000 0.00 0.00 0.00 2.43
1529 1629 6.020201 CGTGGGTTGTATTTGTTCTTGTTTTC 60.020 38.462 0.00 0.00 0.00 2.29
1530 1630 6.814146 GTGGGTTGTATTTGTTCTTGTTTTCA 59.186 34.615 0.00 0.00 0.00 2.69
1531 1631 7.332182 GTGGGTTGTATTTGTTCTTGTTTTCAA 59.668 33.333 0.00 0.00 38.21 2.69
1532 1632 7.878127 TGGGTTGTATTTGTTCTTGTTTTCAAA 59.122 29.630 0.00 0.00 39.47 2.69
1533 1633 8.387354 GGGTTGTATTTGTTCTTGTTTTCAAAG 58.613 33.333 0.00 0.00 39.47 2.77
1534 1634 8.931775 GGTTGTATTTGTTCTTGTTTTCAAAGT 58.068 29.630 0.00 0.00 39.47 2.66
1535 1635 9.739786 GTTGTATTTGTTCTTGTTTTCAAAGTG 57.260 29.630 0.00 0.00 39.47 3.16
1536 1636 9.698309 TTGTATTTGTTCTTGTTTTCAAAGTGA 57.302 25.926 0.00 0.00 39.47 3.41
1537 1637 9.698309 TGTATTTGTTCTTGTTTTCAAAGTGAA 57.302 25.926 0.00 0.00 39.47 3.18
1540 1640 8.824159 TTTGTTCTTGTTTTCAAAGTGAATGA 57.176 26.923 0.00 0.00 39.47 2.57
1541 1641 8.464770 TTGTTCTTGTTTTCAAAGTGAATGAG 57.535 30.769 0.00 0.00 39.47 2.90
1542 1642 7.825681 TGTTCTTGTTTTCAAAGTGAATGAGA 58.174 30.769 0.00 0.00 39.47 3.27
1543 1643 7.754924 TGTTCTTGTTTTCAAAGTGAATGAGAC 59.245 33.333 0.00 0.00 39.47 3.36
1544 1644 7.630242 TCTTGTTTTCAAAGTGAATGAGACT 57.370 32.000 0.00 0.00 39.47 3.24
1545 1645 8.731275 TCTTGTTTTCAAAGTGAATGAGACTA 57.269 30.769 0.00 0.00 39.47 2.59
1546 1646 9.173021 TCTTGTTTTCAAAGTGAATGAGACTAA 57.827 29.630 0.00 0.00 39.47 2.24
1547 1647 9.787532 CTTGTTTTCAAAGTGAATGAGACTAAA 57.212 29.630 0.00 0.00 39.47 1.85
1637 1737 0.247460 GTGGCTTCTCCCAAAATGCC 59.753 55.000 0.00 0.00 36.46 4.40
1686 3601 2.862541 TCCTTACATGCAGCACAAGTT 58.137 42.857 0.00 0.00 31.44 2.66
2235 4167 1.301087 CCGGCGGTAAGACACACAA 60.301 57.895 19.97 0.00 0.00 3.33
2236 4168 0.672401 CCGGCGGTAAGACACACAAT 60.672 55.000 19.97 0.00 0.00 2.71
2238 4170 1.671850 CGGCGGTAAGACACACAATCT 60.672 52.381 0.00 0.00 0.00 2.40
2239 4171 2.000447 GGCGGTAAGACACACAATCTC 59.000 52.381 0.00 0.00 0.00 2.75
2241 4173 3.262420 GCGGTAAGACACACAATCTCAT 58.738 45.455 0.00 0.00 0.00 2.90
2300 4314 2.479389 CCTGACTCTCTCTGTGCGATTC 60.479 54.545 0.00 0.00 0.00 2.52
2301 4315 2.423185 CTGACTCTCTCTGTGCGATTCT 59.577 50.000 0.00 0.00 0.00 2.40
2302 4316 2.163211 TGACTCTCTCTGTGCGATTCTG 59.837 50.000 0.00 0.00 0.00 3.02
2303 4317 2.163412 GACTCTCTCTGTGCGATTCTGT 59.837 50.000 0.00 0.00 0.00 3.41
2304 4318 2.094803 ACTCTCTCTGTGCGATTCTGTG 60.095 50.000 0.00 0.00 0.00 3.66
2319 4333 4.537135 TTCTGTGTCTGTCCAGATAACC 57.463 45.455 0.00 0.00 39.97 2.85
2516 4530 3.296709 CTACGCCGTGGAGCTGGTT 62.297 63.158 0.00 0.00 0.00 3.67
2522 4536 2.747686 GTGGAGCTGGTTTCCGGA 59.252 61.111 0.00 0.00 37.54 5.14
2921 4937 1.671850 CGAAGTTGACGGCTGGTACAT 60.672 52.381 0.00 0.00 38.20 2.29
2926 4942 0.958382 TGACGGCTGGTACATTTGCC 60.958 55.000 0.00 1.44 42.80 4.52
3012 5031 9.712305 ATTCGTTACTTATTCATCTAGGAATGG 57.288 33.333 0.34 0.00 37.98 3.16
3013 5032 7.152645 TCGTTACTTATTCATCTAGGAATGGC 58.847 38.462 0.34 0.00 37.98 4.40
3014 5033 7.015292 TCGTTACTTATTCATCTAGGAATGGCT 59.985 37.037 0.34 0.00 37.98 4.75
3015 5034 8.304596 CGTTACTTATTCATCTAGGAATGGCTA 58.695 37.037 0.34 0.00 37.98 3.93
3016 5035 9.425577 GTTACTTATTCATCTAGGAATGGCTAC 57.574 37.037 0.34 0.00 37.98 3.58
3017 5036 7.863901 ACTTATTCATCTAGGAATGGCTACT 57.136 36.000 0.34 0.00 37.98 2.57
3018 5037 8.958060 ACTTATTCATCTAGGAATGGCTACTA 57.042 34.615 0.34 0.00 37.98 1.82
3019 5038 8.808092 ACTTATTCATCTAGGAATGGCTACTAC 58.192 37.037 0.34 0.00 37.98 2.73
3020 5039 5.707242 TTCATCTAGGAATGGCTACTACG 57.293 43.478 0.00 0.00 0.00 3.51
3021 5040 4.981812 TCATCTAGGAATGGCTACTACGA 58.018 43.478 0.00 0.00 0.00 3.43
3022 5041 5.004448 TCATCTAGGAATGGCTACTACGAG 58.996 45.833 0.00 0.00 0.00 4.18
3023 5042 4.434545 TCTAGGAATGGCTACTACGAGT 57.565 45.455 0.00 0.00 0.00 4.18
3024 5043 4.789807 TCTAGGAATGGCTACTACGAGTT 58.210 43.478 0.00 0.00 0.00 3.01
3025 5044 5.198965 TCTAGGAATGGCTACTACGAGTTT 58.801 41.667 0.00 0.00 0.00 2.66
3026 5045 4.820894 AGGAATGGCTACTACGAGTTTT 57.179 40.909 0.00 0.00 0.00 2.43
3027 5046 5.161943 AGGAATGGCTACTACGAGTTTTT 57.838 39.130 0.00 0.00 0.00 1.94
3028 5047 5.176592 AGGAATGGCTACTACGAGTTTTTC 58.823 41.667 0.00 0.00 0.00 2.29
3029 5048 5.046520 AGGAATGGCTACTACGAGTTTTTCT 60.047 40.000 0.00 0.00 0.00 2.52
3030 5049 5.642491 GGAATGGCTACTACGAGTTTTTCTT 59.358 40.000 0.00 0.00 0.00 2.52
3031 5050 6.148976 GGAATGGCTACTACGAGTTTTTCTTT 59.851 38.462 0.00 0.00 0.00 2.52
3065 5084 6.186957 TCCATATATGCCACTCAAAACTTGT 58.813 36.000 7.24 0.00 0.00 3.16
3078 5097 4.513692 TCAAAACTTGTCCGTACCTTCATG 59.486 41.667 0.00 0.00 0.00 3.07
3116 5135 3.118665 CCCTTTTCCAAATATGCCACTGG 60.119 47.826 0.00 0.00 0.00 4.00
3145 5164 1.138266 ACCGTGTACAGATATGCCACC 59.862 52.381 0.00 0.00 0.00 4.61
3187 5206 0.877071 GACTGTCAAGTGGCATGTGG 59.123 55.000 2.24 0.00 36.52 4.17
3232 5253 2.991434 AGCGGTGATATACTGTAGCG 57.009 50.000 0.00 0.00 37.99 4.26
3266 5287 0.172352 GGCCAATTTCGAATTGCGGA 59.828 50.000 0.00 0.00 41.33 5.54
3267 5288 1.268265 GCCAATTTCGAATTGCGGAC 58.732 50.000 0.00 0.00 41.33 4.79
3308 5349 5.912396 CCGAACAGATTTGAAATTCGAACAA 59.088 36.000 11.58 0.00 43.66 2.83
3396 5439 2.540265 ATTGTTCGCAATTGCCCAAA 57.460 40.000 24.24 13.27 44.77 3.28
3397 5440 2.540265 TTGTTCGCAATTGCCCAAAT 57.460 40.000 24.24 0.00 37.91 2.32
3398 5441 2.540265 TGTTCGCAATTGCCCAAATT 57.460 40.000 24.24 0.00 39.13 1.82
3399 5442 2.843701 TGTTCGCAATTGCCCAAATTT 58.156 38.095 24.24 0.00 36.28 1.82
3400 5443 2.547211 TGTTCGCAATTGCCCAAATTTG 59.453 40.909 24.24 11.40 36.28 2.32
3401 5444 2.540265 TCGCAATTGCCCAAATTTGT 57.460 40.000 24.24 0.00 36.28 2.83
3402 5445 2.843701 TCGCAATTGCCCAAATTTGTT 58.156 38.095 24.24 1.53 36.28 2.83
3403 5446 2.805099 TCGCAATTGCCCAAATTTGTTC 59.195 40.909 24.24 8.41 36.28 3.18
3404 5447 2.411289 CGCAATTGCCCAAATTTGTTCG 60.411 45.455 24.24 1.86 36.28 3.95
3405 5448 2.095819 GCAATTGCCCAAATTTGTTCGG 60.096 45.455 20.06 11.73 36.28 4.30
3406 5449 3.397482 CAATTGCCCAAATTTGTTCGGA 58.603 40.909 16.73 2.74 36.28 4.55
3407 5450 3.760580 ATTGCCCAAATTTGTTCGGAA 57.239 38.095 16.73 10.99 0.00 4.30
3408 5451 2.810439 TGCCCAAATTTGTTCGGAAG 57.190 45.000 16.73 0.00 0.00 3.46
3409 5452 2.035632 TGCCCAAATTTGTTCGGAAGT 58.964 42.857 16.73 0.00 0.00 3.01
3410 5453 2.035321 TGCCCAAATTTGTTCGGAAGTC 59.965 45.455 16.73 0.17 0.00 3.01
3411 5454 2.035321 GCCCAAATTTGTTCGGAAGTCA 59.965 45.455 16.73 0.00 0.00 3.41
3412 5455 3.491792 GCCCAAATTTGTTCGGAAGTCAA 60.492 43.478 16.73 0.00 0.00 3.18
3413 5456 4.688021 CCCAAATTTGTTCGGAAGTCAAA 58.312 39.130 16.73 8.41 38.99 2.69
3414 5457 5.112686 CCCAAATTTGTTCGGAAGTCAAAA 58.887 37.500 16.73 1.91 38.52 2.44
3415 5458 5.757808 CCCAAATTTGTTCGGAAGTCAAAAT 59.242 36.000 16.73 1.10 38.52 1.82
3416 5459 6.259829 CCCAAATTTGTTCGGAAGTCAAAATT 59.740 34.615 16.73 6.13 38.52 1.82
3417 5460 7.201688 CCCAAATTTGTTCGGAAGTCAAAATTT 60.202 33.333 16.73 12.26 38.52 1.82
3418 5461 7.639461 CCAAATTTGTTCGGAAGTCAAAATTTG 59.361 33.333 25.11 25.11 38.52 2.32
3419 5462 7.841915 AATTTGTTCGGAAGTCAAAATTTGT 57.158 28.000 5.56 0.00 38.52 2.83
3420 5463 7.841915 ATTTGTTCGGAAGTCAAAATTTGTT 57.158 28.000 5.56 0.00 38.52 2.83
3421 5464 6.879188 TTGTTCGGAAGTCAAAATTTGTTC 57.121 33.333 5.56 3.41 0.00 3.18
3422 5465 5.031578 TGTTCGGAAGTCAAAATTTGTTCG 58.968 37.500 5.56 0.00 0.00 3.95
3423 5466 3.623863 TCGGAAGTCAAAATTTGTTCGC 58.376 40.909 5.56 0.00 0.00 4.70
3424 5467 3.065510 TCGGAAGTCAAAATTTGTTCGCA 59.934 39.130 5.56 0.00 0.00 5.10
3425 5468 3.794028 CGGAAGTCAAAATTTGTTCGCAA 59.206 39.130 5.56 0.00 34.91 4.85
3426 5469 4.444056 CGGAAGTCAAAATTTGTTCGCAAT 59.556 37.500 5.56 0.00 36.91 3.56
3427 5470 5.051106 CGGAAGTCAAAATTTGTTCGCAATT 60.051 36.000 5.56 0.00 36.91 2.32
3428 5471 6.509358 CGGAAGTCAAAATTTGTTCGCAATTT 60.509 34.615 5.56 0.00 36.91 1.82
3429 5472 7.306283 CGGAAGTCAAAATTTGTTCGCAATTTA 60.306 33.333 5.56 0.00 36.91 1.40
3495 5541 0.806241 GCCCCGCAATTTCGAAAGTA 59.194 50.000 16.80 0.00 0.00 2.24
3542 5588 3.090790 TGTATCACCGCTACAGTACCAA 58.909 45.455 0.00 0.00 0.00 3.67
3546 5592 1.262640 ACCGCTACAGTACCAAGGGG 61.263 60.000 16.61 16.61 46.00 4.79
3589 5635 2.870411 GCTTGACAGTCAACTAACGGTT 59.130 45.455 12.24 0.00 38.93 4.44
3646 5692 6.050432 GCAAATTTTCAATGGCATATCTGGA 58.950 36.000 0.00 0.00 0.00 3.86
3718 5764 6.267471 TGGCATATATGGAATTCACCCTTTTC 59.733 38.462 14.51 0.00 0.00 2.29
3725 5771 5.924356 TGGAATTCACCCTTTTCTTTTTCC 58.076 37.500 7.93 0.00 0.00 3.13
3726 5772 5.665360 TGGAATTCACCCTTTTCTTTTTCCT 59.335 36.000 7.93 0.00 33.05 3.36
3727 5773 6.183360 TGGAATTCACCCTTTTCTTTTTCCTC 60.183 38.462 7.93 0.00 33.05 3.71
3728 5774 6.183360 GGAATTCACCCTTTTCTTTTTCCTCA 60.183 38.462 7.93 0.00 0.00 3.86
3729 5775 7.379059 AATTCACCCTTTTCTTTTTCCTCAT 57.621 32.000 0.00 0.00 0.00 2.90
3730 5776 5.789643 TCACCCTTTTCTTTTTCCTCATG 57.210 39.130 0.00 0.00 0.00 3.07
3731 5777 4.039124 TCACCCTTTTCTTTTTCCTCATGC 59.961 41.667 0.00 0.00 0.00 4.06
3732 5778 3.005791 ACCCTTTTCTTTTTCCTCATGCG 59.994 43.478 0.00 0.00 0.00 4.73
3733 5779 3.578688 CCTTTTCTTTTTCCTCATGCGG 58.421 45.455 0.00 0.00 0.00 5.69
3734 5780 3.255642 CCTTTTCTTTTTCCTCATGCGGA 59.744 43.478 0.00 0.00 0.00 5.54
3735 5781 3.915437 TTTCTTTTTCCTCATGCGGAC 57.085 42.857 3.26 0.00 31.44 4.79
3736 5782 2.859165 TCTTTTTCCTCATGCGGACT 57.141 45.000 3.26 0.00 31.44 3.85
3737 5783 3.140325 TCTTTTTCCTCATGCGGACTT 57.860 42.857 3.26 0.00 31.44 3.01
3738 5784 4.280436 TCTTTTTCCTCATGCGGACTTA 57.720 40.909 3.26 0.00 31.44 2.24
3739 5785 4.000988 TCTTTTTCCTCATGCGGACTTAC 58.999 43.478 3.26 0.00 31.44 2.34
3740 5786 3.410631 TTTTCCTCATGCGGACTTACA 57.589 42.857 3.26 0.00 31.44 2.41
3741 5787 3.410631 TTTCCTCATGCGGACTTACAA 57.589 42.857 3.26 0.00 31.44 2.41
3742 5788 3.410631 TTCCTCATGCGGACTTACAAA 57.589 42.857 3.26 0.00 31.44 2.83
3743 5789 3.627395 TCCTCATGCGGACTTACAAAT 57.373 42.857 0.00 0.00 0.00 2.32
3744 5790 3.950397 TCCTCATGCGGACTTACAAATT 58.050 40.909 0.00 0.00 0.00 1.82
3745 5791 4.331968 TCCTCATGCGGACTTACAAATTT 58.668 39.130 0.00 0.00 0.00 1.82
3746 5792 4.764823 TCCTCATGCGGACTTACAAATTTT 59.235 37.500 0.00 0.00 0.00 1.82
3747 5793 5.095490 CCTCATGCGGACTTACAAATTTTC 58.905 41.667 0.00 0.00 0.00 2.29
3748 5794 5.106157 CCTCATGCGGACTTACAAATTTTCT 60.106 40.000 0.00 0.00 0.00 2.52
3749 5795 5.698832 TCATGCGGACTTACAAATTTTCTG 58.301 37.500 0.00 0.00 0.00 3.02
3750 5796 4.497473 TGCGGACTTACAAATTTTCTGG 57.503 40.909 0.00 0.00 0.00 3.86
3751 5797 3.242518 GCGGACTTACAAATTTTCTGGC 58.757 45.455 0.00 0.00 0.00 4.85
3752 5798 3.305064 GCGGACTTACAAATTTTCTGGCA 60.305 43.478 0.00 0.00 0.00 4.92
3753 5799 4.226761 CGGACTTACAAATTTTCTGGCAC 58.773 43.478 0.00 0.00 0.00 5.01
3754 5800 4.556233 GGACTTACAAATTTTCTGGCACC 58.444 43.478 0.00 0.00 0.00 5.01
3755 5801 4.280929 GGACTTACAAATTTTCTGGCACCT 59.719 41.667 0.00 0.00 0.00 4.00
3756 5802 5.200368 ACTTACAAATTTTCTGGCACCTG 57.800 39.130 0.00 0.00 0.00 4.00
3757 5803 4.892934 ACTTACAAATTTTCTGGCACCTGA 59.107 37.500 0.00 0.00 0.00 3.86
3758 5804 5.362430 ACTTACAAATTTTCTGGCACCTGAA 59.638 36.000 5.01 5.01 33.22 3.02
3759 5805 4.058721 ACAAATTTTCTGGCACCTGAAC 57.941 40.909 8.36 0.00 34.46 3.18
3760 5806 3.706086 ACAAATTTTCTGGCACCTGAACT 59.294 39.130 8.36 0.00 34.46 3.01
3761 5807 4.162131 ACAAATTTTCTGGCACCTGAACTT 59.838 37.500 8.36 3.73 34.46 2.66
3762 5808 5.118286 CAAATTTTCTGGCACCTGAACTTT 58.882 37.500 8.36 8.64 34.46 2.66
3763 5809 6.127196 ACAAATTTTCTGGCACCTGAACTTTA 60.127 34.615 8.36 0.00 34.46 1.85
3764 5810 6.670695 AATTTTCTGGCACCTGAACTTTAT 57.329 33.333 8.36 0.00 34.46 1.40
3765 5811 6.670695 ATTTTCTGGCACCTGAACTTTATT 57.329 33.333 8.36 0.00 34.46 1.40
3766 5812 6.478512 TTTTCTGGCACCTGAACTTTATTT 57.521 33.333 8.36 0.00 34.46 1.40
3767 5813 7.589958 TTTTCTGGCACCTGAACTTTATTTA 57.410 32.000 8.36 0.00 34.46 1.40
3768 5814 6.817765 TTCTGGCACCTGAACTTTATTTAG 57.182 37.500 5.01 0.00 0.00 1.85
3769 5815 5.253330 TCTGGCACCTGAACTTTATTTAGG 58.747 41.667 0.00 0.00 34.70 2.69
3770 5816 5.013704 TCTGGCACCTGAACTTTATTTAGGA 59.986 40.000 4.62 0.00 32.86 2.94
3771 5817 5.826643 TGGCACCTGAACTTTATTTAGGAT 58.173 37.500 4.62 0.00 32.86 3.24
3772 5818 6.252995 TGGCACCTGAACTTTATTTAGGATT 58.747 36.000 4.62 0.00 32.86 3.01
3773 5819 6.723977 TGGCACCTGAACTTTATTTAGGATTT 59.276 34.615 4.62 0.00 32.86 2.17
3774 5820 7.234577 TGGCACCTGAACTTTATTTAGGATTTT 59.765 33.333 4.62 0.00 32.86 1.82
3775 5821 7.545615 GGCACCTGAACTTTATTTAGGATTTTG 59.454 37.037 4.62 0.00 32.86 2.44
3776 5822 8.303876 GCACCTGAACTTTATTTAGGATTTTGA 58.696 33.333 4.62 0.00 32.86 2.69
3784 5830 8.758829 ACTTTATTTAGGATTTTGAACATCCCC 58.241 33.333 6.74 0.00 41.27 4.81
3785 5831 5.852282 ATTTAGGATTTTGAACATCCCCG 57.148 39.130 6.74 0.00 41.27 5.73
3786 5832 1.474330 AGGATTTTGAACATCCCCGC 58.526 50.000 6.74 0.00 41.27 6.13
3787 5833 0.459899 GGATTTTGAACATCCCCGCC 59.540 55.000 0.00 0.00 35.03 6.13
3788 5834 0.100503 GATTTTGAACATCCCCGCCG 59.899 55.000 0.00 0.00 0.00 6.46
3789 5835 0.610785 ATTTTGAACATCCCCGCCGT 60.611 50.000 0.00 0.00 0.00 5.68
3790 5836 1.238625 TTTTGAACATCCCCGCCGTC 61.239 55.000 0.00 0.00 0.00 4.79
3791 5837 2.398840 TTTGAACATCCCCGCCGTCA 62.399 55.000 0.00 0.00 0.00 4.35
3792 5838 2.189521 GAACATCCCCGCCGTCAT 59.810 61.111 0.00 0.00 0.00 3.06
3793 5839 2.124736 AACATCCCCGCCGTCATG 60.125 61.111 0.00 0.00 0.00 3.07
3794 5840 3.697439 AACATCCCCGCCGTCATGG 62.697 63.158 0.00 0.00 42.50 3.66
3818 5864 3.708210 CCGTGGAGGCTACTGGAA 58.292 61.111 0.00 0.00 0.00 3.53
3819 5865 1.980052 CCGTGGAGGCTACTGGAAA 59.020 57.895 0.00 0.00 0.00 3.13
3820 5866 0.391263 CCGTGGAGGCTACTGGAAAC 60.391 60.000 0.00 0.00 0.00 2.78
3821 5867 0.736325 CGTGGAGGCTACTGGAAACG 60.736 60.000 0.00 0.00 0.00 3.60
3822 5868 0.606604 GTGGAGGCTACTGGAAACGA 59.393 55.000 0.00 0.00 0.00 3.85
3823 5869 0.606604 TGGAGGCTACTGGAAACGAC 59.393 55.000 0.00 0.00 0.00 4.34
3824 5870 0.896226 GGAGGCTACTGGAAACGACT 59.104 55.000 0.00 0.00 0.00 4.18
3825 5871 1.135053 GGAGGCTACTGGAAACGACTC 60.135 57.143 0.00 0.00 0.00 3.36
3826 5872 1.819903 GAGGCTACTGGAAACGACTCT 59.180 52.381 0.00 0.00 0.00 3.24
3827 5873 1.546476 AGGCTACTGGAAACGACTCTG 59.454 52.381 0.00 0.00 0.00 3.35
3828 5874 1.351153 GCTACTGGAAACGACTCTGC 58.649 55.000 0.00 0.00 0.00 4.26
3829 5875 1.067495 GCTACTGGAAACGACTCTGCT 60.067 52.381 0.00 0.00 0.00 4.24
3830 5876 2.869897 CTACTGGAAACGACTCTGCTC 58.130 52.381 0.00 0.00 0.00 4.26
3831 5877 1.333177 ACTGGAAACGACTCTGCTCT 58.667 50.000 0.00 0.00 0.00 4.09
3832 5878 1.271102 ACTGGAAACGACTCTGCTCTC 59.729 52.381 0.00 0.00 0.00 3.20
3833 5879 1.543802 CTGGAAACGACTCTGCTCTCT 59.456 52.381 0.00 0.00 0.00 3.10
3834 5880 2.750166 CTGGAAACGACTCTGCTCTCTA 59.250 50.000 0.00 0.00 0.00 2.43
3835 5881 2.750166 TGGAAACGACTCTGCTCTCTAG 59.250 50.000 0.00 0.00 0.00 2.43
3836 5882 2.750712 GGAAACGACTCTGCTCTCTAGT 59.249 50.000 0.00 0.00 0.00 2.57
3837 5883 3.191791 GGAAACGACTCTGCTCTCTAGTT 59.808 47.826 0.00 0.00 0.00 2.24
3838 5884 4.321378 GGAAACGACTCTGCTCTCTAGTTT 60.321 45.833 0.00 0.00 33.90 2.66
3839 5885 5.106237 GGAAACGACTCTGCTCTCTAGTTTA 60.106 44.000 0.00 0.00 31.76 2.01
3840 5886 5.961396 AACGACTCTGCTCTCTAGTTTAA 57.039 39.130 0.00 0.00 0.00 1.52
3841 5887 6.518208 AACGACTCTGCTCTCTAGTTTAAT 57.482 37.500 0.00 0.00 0.00 1.40
3842 5888 6.126568 ACGACTCTGCTCTCTAGTTTAATC 57.873 41.667 0.00 0.00 0.00 1.75
3843 5889 5.648526 ACGACTCTGCTCTCTAGTTTAATCA 59.351 40.000 0.00 0.00 0.00 2.57
3844 5890 6.320164 ACGACTCTGCTCTCTAGTTTAATCAT 59.680 38.462 0.00 0.00 0.00 2.45
3845 5891 6.636447 CGACTCTGCTCTCTAGTTTAATCATG 59.364 42.308 0.00 0.00 0.00 3.07
3846 5892 6.815089 ACTCTGCTCTCTAGTTTAATCATGG 58.185 40.000 0.00 0.00 0.00 3.66
3847 5893 6.609212 ACTCTGCTCTCTAGTTTAATCATGGA 59.391 38.462 0.00 0.00 0.00 3.41
3848 5894 7.124901 ACTCTGCTCTCTAGTTTAATCATGGAA 59.875 37.037 0.00 0.00 0.00 3.53
3849 5895 8.027524 TCTGCTCTCTAGTTTAATCATGGAAT 57.972 34.615 0.00 0.00 0.00 3.01
3851 5897 6.994496 TGCTCTCTAGTTTAATCATGGAATGG 59.006 38.462 0.00 0.00 46.73 3.16
3852 5898 6.995091 GCTCTCTAGTTTAATCATGGAATGGT 59.005 38.462 0.00 0.00 46.73 3.55
3853 5899 8.150945 GCTCTCTAGTTTAATCATGGAATGGTA 58.849 37.037 0.00 0.00 46.73 3.25
3866 5912 9.944376 ATCATGGAATGGTATATTGTACTGTAC 57.056 33.333 10.98 10.98 46.73 2.90
3867 5913 8.372459 TCATGGAATGGTATATTGTACTGTACC 58.628 37.037 14.91 1.25 46.73 3.34
3869 5915 7.732025 TGGAATGGTATATTGTACTGTACCAG 58.268 38.462 14.91 0.00 46.84 4.00
3870 5916 7.565768 TGGAATGGTATATTGTACTGTACCAGA 59.434 37.037 14.91 2.22 46.84 3.86
3871 5917 8.426489 GGAATGGTATATTGTACTGTACCAGAA 58.574 37.037 14.91 3.85 46.84 3.02
3872 5918 9.826574 GAATGGTATATTGTACTGTACCAGAAA 57.173 33.333 14.91 3.51 46.84 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 2.622436 AGCAAAACTAGCACCGATCTC 58.378 47.619 0.00 0.00 0.00 2.75
37 38 2.443632 TCCCAACCAACATGAGTAACCA 59.556 45.455 0.00 0.00 0.00 3.67
45 46 4.897140 ACATTTGAATCCCAACCAACATG 58.103 39.130 0.00 0.00 33.85 3.21
54 55 4.487804 TGGAAAGGAACATTTGAATCCCA 58.512 39.130 0.00 0.00 33.55 4.37
71 72 1.971167 GCCAGCACACCGATGGAAA 60.971 57.895 0.00 0.00 36.09 3.13
72 73 2.359850 GCCAGCACACCGATGGAA 60.360 61.111 0.00 0.00 36.09 3.53
73 74 2.410322 AAAGCCAGCACACCGATGGA 62.410 55.000 0.00 0.00 36.09 3.41
79 80 1.300388 CAAGCAAAGCCAGCACACC 60.300 57.895 0.00 0.00 0.00 4.16
82 83 0.102844 TGAACAAGCAAAGCCAGCAC 59.897 50.000 0.00 0.00 0.00 4.40
87 88 2.869233 TCAAGTGAACAAGCAAAGCC 57.131 45.000 0.00 0.00 0.00 4.35
103 104 1.243342 CCAGCTTTCGGTGCCATCAA 61.243 55.000 0.00 0.00 37.32 2.57
113 114 2.099062 GCATCACGCCAGCTTTCG 59.901 61.111 3.10 3.10 32.94 3.46
116 117 3.271014 CTTGCATCACGCCAGCTT 58.729 55.556 0.00 0.00 41.33 3.74
124 125 7.041848 ACAAAAGAAAATTTAGGCTTGCATCAC 60.042 33.333 0.00 0.00 0.00 3.06
138 139 5.414765 CCGGTAGGCTAGACAAAAGAAAATT 59.585 40.000 0.00 0.00 0.00 1.82
160 161 2.883574 TCGTAAGGTTACAATCTGCCG 58.116 47.619 1.04 0.00 33.28 5.69
186 187 9.573133 CGAAATTGGAAGCTTTATTAATGAAGT 57.427 29.630 18.20 3.01 0.00 3.01
192 193 9.751542 TTTCAACGAAATTGGAAGCTTTATTAA 57.248 25.926 0.00 0.00 38.98 1.40
223 224 4.584325 TGCCTAAATATGAATGCACCTTCC 59.416 41.667 0.00 0.00 0.00 3.46
228 229 9.403110 CTTAGATTTGCCTAAATATGAATGCAC 57.597 33.333 0.00 0.00 36.66 4.57
251 252 6.363167 TCCGTTCCAAAATTAGAGGACTTA 57.637 37.500 0.00 0.00 0.00 2.24
259 260 6.753107 ATGTTACCTCCGTTCCAAAATTAG 57.247 37.500 0.00 0.00 0.00 1.73
274 275 7.849322 AAAAACAGGAACCATAATGTTACCT 57.151 32.000 0.00 0.00 34.92 3.08
292 293 9.575868 TGGTCCACTAGTATCATTTTAAAAACA 57.424 29.630 4.44 0.00 0.00 2.83
299 302 7.050377 CACTGATGGTCCACTAGTATCATTTT 58.950 38.462 9.01 0.00 0.00 1.82
335 338 0.164647 GCGCGTGCATATCTGAATCC 59.835 55.000 17.66 0.00 42.15 3.01
387 390 4.125703 CAAGGACAGCTTAAGATGCTAGG 58.874 47.826 20.30 3.43 38.92 3.02
389 392 3.774766 TCCAAGGACAGCTTAAGATGCTA 59.225 43.478 20.30 0.00 38.92 3.49
459 464 5.705441 TCACCTAGTGTTCATGTGGATTTTC 59.295 40.000 0.00 0.00 34.79 2.29
521 526 0.539051 AAGGATTCCGCTGTCTCCTG 59.461 55.000 0.00 0.00 38.15 3.86
623 632 3.871006 CCAGCGCTCATTATCAGTTTGTA 59.129 43.478 7.13 0.00 0.00 2.41
626 635 1.672881 GCCAGCGCTCATTATCAGTTT 59.327 47.619 7.13 0.00 0.00 2.66
711 720 0.598680 GCAGGTCCCTGATTCGATCG 60.599 60.000 17.49 9.36 46.30 3.69
727 736 1.305633 TCCTCCTCTCCACCTGCAG 60.306 63.158 6.78 6.78 0.00 4.41
728 737 1.610673 GTCCTCCTCTCCACCTGCA 60.611 63.158 0.00 0.00 0.00 4.41
729 738 2.716017 CGTCCTCCTCTCCACCTGC 61.716 68.421 0.00 0.00 0.00 4.85
834 843 4.779733 ACGGATCGGCCAGGAGGT 62.780 66.667 2.24 0.00 37.19 3.85
906 953 2.569059 CTTCTACGTATCGGGGACAGA 58.431 52.381 0.00 0.00 0.00 3.41
907 954 1.001597 GCTTCTACGTATCGGGGACAG 60.002 57.143 0.00 0.00 0.00 3.51
908 955 1.027357 GCTTCTACGTATCGGGGACA 58.973 55.000 0.00 0.00 0.00 4.02
909 956 1.266446 GAGCTTCTACGTATCGGGGAC 59.734 57.143 0.00 0.00 0.00 4.46
940 987 5.885352 TCACAATCTTTCTCACACTTTGGAA 59.115 36.000 0.00 0.00 0.00 3.53
948 995 5.297547 GTGTACCTCACAATCTTTCTCACA 58.702 41.667 0.00 0.00 45.51 3.58
971 1022 1.028905 CTCTTCACCTCCTCGGCTAG 58.971 60.000 0.00 0.00 35.61 3.42
997 1052 1.648467 GCGCCCTTGAACACCATCTC 61.648 60.000 0.00 0.00 0.00 2.75
1006 1061 3.659092 CAACAGCGCGCCCTTGAA 61.659 61.111 30.33 0.00 0.00 2.69
1021 1076 1.495584 GCGCAGACGACCAAGAACAA 61.496 55.000 0.30 0.00 43.93 2.83
1059 1114 3.390521 TTCTCACCATCGCCGGCT 61.391 61.111 26.68 2.78 0.00 5.52
1076 1131 1.831106 TGTGTGTGGTGAGTTCTCAGT 59.169 47.619 2.53 0.00 0.00 3.41
1078 1133 3.342377 TTTGTGTGTGGTGAGTTCTCA 57.658 42.857 0.00 0.00 0.00 3.27
1079 1134 4.096382 ACAATTTGTGTGTGGTGAGTTCTC 59.904 41.667 0.15 0.00 39.72 2.87
1080 1135 4.016444 ACAATTTGTGTGTGGTGAGTTCT 58.984 39.130 0.15 0.00 39.72 3.01
1081 1136 4.370364 ACAATTTGTGTGTGGTGAGTTC 57.630 40.909 0.15 0.00 39.72 3.01
1085 1140 2.495270 AGCAACAATTTGTGTGTGGTGA 59.505 40.909 2.13 0.00 40.60 4.02
1087 1142 3.608316 AAGCAACAATTTGTGTGTGGT 57.392 38.095 2.13 0.81 40.60 4.16
1088 1143 4.269844 GGTTAAGCAACAATTTGTGTGTGG 59.730 41.667 2.13 0.00 40.60 4.17
1089 1144 4.269844 GGGTTAAGCAACAATTTGTGTGTG 59.730 41.667 7.03 0.00 40.60 3.82
1090 1145 4.161377 AGGGTTAAGCAACAATTTGTGTGT 59.839 37.500 7.03 0.00 40.60 3.72
1091 1146 4.692228 AGGGTTAAGCAACAATTTGTGTG 58.308 39.130 7.03 5.29 40.60 3.82
1092 1147 5.115480 CAAGGGTTAAGCAACAATTTGTGT 58.885 37.500 7.03 0.00 44.64 3.72
1093 1148 4.024977 GCAAGGGTTAAGCAACAATTTGTG 60.025 41.667 7.03 0.00 36.29 3.33
1094 1149 4.126437 GCAAGGGTTAAGCAACAATTTGT 58.874 39.130 7.03 0.00 36.29 2.83
1095 1150 4.125703 TGCAAGGGTTAAGCAACAATTTG 58.874 39.130 7.03 0.00 36.29 2.32
1096 1151 4.414337 TGCAAGGGTTAAGCAACAATTT 57.586 36.364 7.03 0.00 36.29 1.82
1099 1154 2.547642 GCATGCAAGGGTTAAGCAACAA 60.548 45.455 14.21 0.00 42.15 2.83
1100 1155 1.000731 GCATGCAAGGGTTAAGCAACA 59.999 47.619 14.21 0.00 42.15 3.33
1133 1198 6.828273 TCATTCCACTCCACCAAATTACATAG 59.172 38.462 0.00 0.00 0.00 2.23
1134 1199 6.726379 TCATTCCACTCCACCAAATTACATA 58.274 36.000 0.00 0.00 0.00 2.29
1135 1200 5.579047 TCATTCCACTCCACCAAATTACAT 58.421 37.500 0.00 0.00 0.00 2.29
1136 1201 4.991776 TCATTCCACTCCACCAAATTACA 58.008 39.130 0.00 0.00 0.00 2.41
1137 1202 5.010282 ACTCATTCCACTCCACCAAATTAC 58.990 41.667 0.00 0.00 0.00 1.89
1158 1223 3.487711 GCGATACGAATCTGACAGTCACT 60.488 47.826 0.00 0.00 0.00 3.41
1159 1224 2.784380 GCGATACGAATCTGACAGTCAC 59.216 50.000 0.00 0.00 0.00 3.67
1160 1225 3.066369 GCGATACGAATCTGACAGTCA 57.934 47.619 2.48 2.48 0.00 3.41
1174 1239 4.772046 TTGCAAATTAGTCTCGCGATAC 57.228 40.909 16.09 16.09 0.00 2.24
1177 1242 3.064207 AGTTTGCAAATTAGTCTCGCGA 58.936 40.909 16.21 9.26 0.00 5.87
1178 1243 3.455619 AGTTTGCAAATTAGTCTCGCG 57.544 42.857 16.21 0.00 0.00 5.87
1180 1245 5.625311 GGAACAAGTTTGCAAATTAGTCTCG 59.375 40.000 16.21 0.00 0.00 4.04
1194 1259 2.101917 TCGAGAAGACGGGAACAAGTTT 59.898 45.455 0.00 0.00 0.00 2.66
1203 1268 2.656560 AAGAACATCGAGAAGACGGG 57.343 50.000 0.00 0.00 0.00 5.28
1204 1269 4.099120 CACTAAGAACATCGAGAAGACGG 58.901 47.826 0.00 0.00 0.00 4.79
1249 1330 7.340256 AGTACATGGAATTAATTAACCCGACA 58.660 34.615 0.00 0.00 0.00 4.35
1250 1331 7.797038 AGTACATGGAATTAATTAACCCGAC 57.203 36.000 0.00 3.30 0.00 4.79
1252 1333 9.550406 TCTTAGTACATGGAATTAATTAACCCG 57.450 33.333 0.00 0.00 0.00 5.28
1264 1361 9.280174 CTAAACCAACTTTCTTAGTACATGGAA 57.720 33.333 0.00 0.00 36.28 3.53
1268 1365 9.623000 AACACTAAACCAACTTTCTTAGTACAT 57.377 29.630 0.00 0.00 35.54 2.29
1273 1370 9.450807 CAATGAACACTAAACCAACTTTCTTAG 57.549 33.333 0.00 0.00 0.00 2.18
1274 1371 8.962679 ACAATGAACACTAAACCAACTTTCTTA 58.037 29.630 0.00 0.00 0.00 2.10
1277 1374 7.220108 GTGACAATGAACACTAAACCAACTTTC 59.780 37.037 7.69 0.00 34.65 2.62
1278 1375 7.033185 GTGACAATGAACACTAAACCAACTTT 58.967 34.615 7.69 0.00 34.65 2.66
1279 1376 6.560711 GTGACAATGAACACTAAACCAACTT 58.439 36.000 7.69 0.00 34.65 2.66
1280 1377 5.220777 CGTGACAATGAACACTAAACCAACT 60.221 40.000 11.49 0.00 35.23 3.16
1281 1378 4.967575 CGTGACAATGAACACTAAACCAAC 59.032 41.667 11.49 0.00 35.23 3.77
1282 1379 4.496673 GCGTGACAATGAACACTAAACCAA 60.497 41.667 11.49 0.00 35.23 3.67
1283 1380 3.002862 GCGTGACAATGAACACTAAACCA 59.997 43.478 11.49 0.00 35.23 3.67
1284 1381 3.551551 GCGTGACAATGAACACTAAACC 58.448 45.455 11.49 0.00 35.23 3.27
1295 1392 1.121850 CGTGCAATCGCGTGACAATG 61.122 55.000 5.77 2.14 42.97 2.82
1314 1411 2.717639 ATTATGCTGACACCAGTCCC 57.282 50.000 0.00 0.00 44.33 4.46
1318 1415 5.121611 TCGTAACAAATTATGCTGACACCAG 59.878 40.000 0.00 0.00 43.22 4.00
1320 1417 5.539582 TCGTAACAAATTATGCTGACACC 57.460 39.130 0.00 0.00 0.00 4.16
1340 1440 3.628053 TTACAGATTTTTACGCGCTCG 57.372 42.857 5.73 0.00 42.43 5.03
1341 1441 5.050972 AGCTATTACAGATTTTTACGCGCTC 60.051 40.000 5.73 0.00 0.00 5.03
1342 1442 4.809426 AGCTATTACAGATTTTTACGCGCT 59.191 37.500 5.73 0.00 0.00 5.92
1343 1443 5.079397 AGCTATTACAGATTTTTACGCGC 57.921 39.130 5.73 0.00 0.00 6.86
1344 1444 6.268797 TGAGCTATTACAGATTTTTACGCG 57.731 37.500 3.53 3.53 0.00 6.01
1345 1445 6.018669 AGCTGAGCTATTACAGATTTTTACGC 60.019 38.462 4.49 0.00 36.99 4.42
1354 1454 9.355916 TCTAAATCTAAGCTGAGCTATTACAGA 57.644 33.333 7.68 7.79 38.25 3.41
1382 1482 5.855740 AAGTTCGCTAATCTTAGTAGCCT 57.144 39.130 1.25 0.00 40.79 4.58
1403 1503 9.120538 AGATGAGTTCTAGCAAAACTGTAAAAA 57.879 29.630 0.32 0.00 37.10 1.94
1404 1504 8.677148 AGATGAGTTCTAGCAAAACTGTAAAA 57.323 30.769 0.32 0.00 37.10 1.52
1405 1505 9.424319 CTAGATGAGTTCTAGCAAAACTGTAAA 57.576 33.333 0.32 0.00 45.63 2.01
1406 1506 8.988064 CTAGATGAGTTCTAGCAAAACTGTAA 57.012 34.615 0.32 0.00 45.63 2.41
1458 1558 6.154445 GCATCACATCCAATGCCTATAAAAG 58.846 40.000 0.00 0.00 41.92 2.27
1459 1559 6.088016 GCATCACATCCAATGCCTATAAAA 57.912 37.500 0.00 0.00 41.92 1.52
1460 1560 5.710513 GCATCACATCCAATGCCTATAAA 57.289 39.130 0.00 0.00 41.92 1.40
1467 1567 6.552629 CATCTTATAGCATCACATCCAATGC 58.447 40.000 0.00 0.00 46.84 3.56
1468 1568 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
1469 1569 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
1470 1570 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
1471 1571 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
1472 1572 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
1473 1573 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
1474 1574 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
1475 1575 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
1476 1576 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
1477 1577 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
1478 1578 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
1479 1579 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
1480 1580 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
1481 1581 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
1482 1582 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
1483 1583 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
1484 1584 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
1485 1585 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
1486 1586 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
1487 1587 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
1488 1588 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
1489 1589 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
1490 1590 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
1491 1591 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
1492 1592 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
1493 1593 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
1494 1594 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
1495 1595 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
1496 1596 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
1497 1597 1.519408 AATACAACCCACGTCAGCAC 58.481 50.000 0.00 0.00 0.00 4.40
1498 1598 1.876799 CAAATACAACCCACGTCAGCA 59.123 47.619 0.00 0.00 0.00 4.41
1499 1599 1.877443 ACAAATACAACCCACGTCAGC 59.123 47.619 0.00 0.00 0.00 4.26
1500 1600 3.813166 AGAACAAATACAACCCACGTCAG 59.187 43.478 0.00 0.00 0.00 3.51
1501 1601 3.811083 AGAACAAATACAACCCACGTCA 58.189 40.909 0.00 0.00 0.00 4.35
1502 1602 4.035909 ACAAGAACAAATACAACCCACGTC 59.964 41.667 0.00 0.00 0.00 4.34
1503 1603 3.949113 ACAAGAACAAATACAACCCACGT 59.051 39.130 0.00 0.00 0.00 4.49
1504 1604 4.561735 ACAAGAACAAATACAACCCACG 57.438 40.909 0.00 0.00 0.00 4.94
1505 1605 6.814146 TGAAAACAAGAACAAATACAACCCAC 59.186 34.615 0.00 0.00 0.00 4.61
1506 1606 6.936279 TGAAAACAAGAACAAATACAACCCA 58.064 32.000 0.00 0.00 0.00 4.51
1507 1607 7.835634 TTGAAAACAAGAACAAATACAACCC 57.164 32.000 0.00 0.00 0.00 4.11
1508 1608 8.931775 ACTTTGAAAACAAGAACAAATACAACC 58.068 29.630 0.00 0.00 33.01 3.77
1509 1609 9.739786 CACTTTGAAAACAAGAACAAATACAAC 57.260 29.630 0.00 0.00 33.01 3.32
1510 1610 9.698309 TCACTTTGAAAACAAGAACAAATACAA 57.302 25.926 0.00 0.00 33.01 2.41
1511 1611 9.698309 TTCACTTTGAAAACAAGAACAAATACA 57.302 25.926 0.00 0.00 32.71 2.29
1514 1614 9.434420 TCATTCACTTTGAAAACAAGAACAAAT 57.566 25.926 0.00 0.00 40.12 2.32
1515 1615 8.824159 TCATTCACTTTGAAAACAAGAACAAA 57.176 26.923 0.00 0.00 40.12 2.83
1516 1616 8.303156 TCTCATTCACTTTGAAAACAAGAACAA 58.697 29.630 0.00 0.00 40.12 2.83
1517 1617 7.754924 GTCTCATTCACTTTGAAAACAAGAACA 59.245 33.333 0.00 0.00 40.12 3.18
1518 1618 7.970614 AGTCTCATTCACTTTGAAAACAAGAAC 59.029 33.333 0.00 0.00 40.12 3.01
1519 1619 8.055279 AGTCTCATTCACTTTGAAAACAAGAA 57.945 30.769 0.00 0.00 40.12 2.52
1520 1620 7.630242 AGTCTCATTCACTTTGAAAACAAGA 57.370 32.000 0.00 0.00 40.12 3.02
1521 1621 9.787532 TTTAGTCTCATTCACTTTGAAAACAAG 57.212 29.630 0.00 0.00 40.12 3.16
1560 1660 8.745149 AGTAGGGAGTATCTAGAACTCATCTA 57.255 38.462 24.15 21.32 44.25 1.98
1561 1661 7.642094 AGTAGGGAGTATCTAGAACTCATCT 57.358 40.000 24.15 21.93 44.25 2.90
1562 1662 8.700439 AAAGTAGGGAGTATCTAGAACTCATC 57.300 38.462 24.15 18.49 44.25 2.92
1563 1663 9.495382 AAAAAGTAGGGAGTATCTAGAACTCAT 57.505 33.333 24.15 18.05 44.25 2.90
1564 1664 8.896722 AAAAAGTAGGGAGTATCTAGAACTCA 57.103 34.615 24.15 10.81 44.25 3.41
1567 1667 9.531942 GCTTAAAAAGTAGGGAGTATCTAGAAC 57.468 37.037 0.00 0.00 33.73 3.01
1568 1668 9.263446 TGCTTAAAAAGTAGGGAGTATCTAGAA 57.737 33.333 0.00 0.00 33.73 2.10
1569 1669 8.834004 TGCTTAAAAAGTAGGGAGTATCTAGA 57.166 34.615 0.00 0.00 33.73 2.43
1570 1670 9.699703 GATGCTTAAAAAGTAGGGAGTATCTAG 57.300 37.037 0.00 0.00 33.73 2.43
1571 1671 9.209048 TGATGCTTAAAAAGTAGGGAGTATCTA 57.791 33.333 0.00 0.00 33.73 1.98
1572 1672 8.090788 TGATGCTTAAAAAGTAGGGAGTATCT 57.909 34.615 0.00 0.00 33.73 1.98
1573 1673 7.041712 GCTGATGCTTAAAAAGTAGGGAGTATC 60.042 40.741 0.00 0.00 36.03 2.24
1574 1674 6.768381 GCTGATGCTTAAAAAGTAGGGAGTAT 59.232 38.462 0.00 0.00 36.03 2.12
1575 1675 6.113411 GCTGATGCTTAAAAAGTAGGGAGTA 58.887 40.000 0.00 0.00 36.03 2.59
1576 1676 4.944317 GCTGATGCTTAAAAAGTAGGGAGT 59.056 41.667 0.00 0.00 36.03 3.85
1577 1677 5.491635 GCTGATGCTTAAAAAGTAGGGAG 57.508 43.478 0.00 0.00 36.03 4.30
1602 1702 0.528017 CCACGCTCTGTCTTCTAGCA 59.472 55.000 0.00 0.00 35.98 3.49
1637 1737 0.098025 AACACAAACAGTCAACGCCG 59.902 50.000 0.00 0.00 0.00 6.46
1686 3601 5.196341 ACATGACGTGTTAGAGACAGAAA 57.804 39.130 0.00 0.00 38.01 2.52
2235 4167 6.286758 ACTCGAAAGTTCATGCATATGAGAT 58.713 36.000 6.97 0.00 43.76 2.75
2236 4168 5.664457 ACTCGAAAGTTCATGCATATGAGA 58.336 37.500 6.97 0.00 43.76 3.27
2238 4170 5.458779 CGTACTCGAAAGTTCATGCATATGA 59.541 40.000 6.97 0.00 39.26 2.15
2239 4171 5.232202 ACGTACTCGAAAGTTCATGCATATG 59.768 40.000 0.00 0.00 40.62 1.78
2241 4173 4.740268 ACGTACTCGAAAGTTCATGCATA 58.260 39.130 0.00 0.00 40.62 3.14
2300 4314 3.854666 CAGGTTATCTGGACAGACACAG 58.145 50.000 3.82 0.00 40.75 3.66
2301 4315 2.028112 GCAGGTTATCTGGACAGACACA 60.028 50.000 3.82 0.00 43.54 3.72
2302 4316 2.234908 AGCAGGTTATCTGGACAGACAC 59.765 50.000 3.82 4.74 43.54 3.67
2303 4317 2.234661 CAGCAGGTTATCTGGACAGACA 59.765 50.000 3.82 0.00 43.54 3.41
2304 4318 2.497675 TCAGCAGGTTATCTGGACAGAC 59.502 50.000 3.82 0.00 43.54 3.51
2319 4333 1.831652 AAGTCCCCGTTCCTCAGCAG 61.832 60.000 0.00 0.00 0.00 4.24
2378 4392 4.994471 CTCTGCGGCACCAGCACA 62.994 66.667 0.00 0.00 44.61 4.57
2723 4737 0.387929 TATGGATCGCCGTGAACTCC 59.612 55.000 0.00 0.00 36.79 3.85
2921 4937 1.064017 ACCCTGTGTTTCAGAGGCAAA 60.064 47.619 7.32 0.00 42.66 3.68
2926 4942 2.233922 ACGGATACCCTGTGTTTCAGAG 59.766 50.000 0.00 0.00 46.27 3.35
2965 4984 8.662141 ACGAATAAAATGTGTAGTGGTACAATC 58.338 33.333 0.00 0.00 44.16 2.67
3000 5019 4.762765 ACTCGTAGTAGCCATTCCTAGATG 59.237 45.833 0.00 0.00 0.00 2.90
3001 5020 4.988029 ACTCGTAGTAGCCATTCCTAGAT 58.012 43.478 0.00 0.00 0.00 1.98
3006 5025 5.176592 AGAAAAACTCGTAGTAGCCATTCC 58.823 41.667 0.00 0.00 0.00 3.01
3007 5026 6.723131 AAGAAAAACTCGTAGTAGCCATTC 57.277 37.500 0.00 0.00 0.00 2.67
3008 5027 7.360361 CAAAAGAAAAACTCGTAGTAGCCATT 58.640 34.615 0.00 0.00 0.00 3.16
3009 5028 6.072673 CCAAAAGAAAAACTCGTAGTAGCCAT 60.073 38.462 0.00 0.00 0.00 4.40
3010 5029 5.237779 CCAAAAGAAAAACTCGTAGTAGCCA 59.762 40.000 0.00 0.00 0.00 4.75
3011 5030 5.334646 CCCAAAAGAAAAACTCGTAGTAGCC 60.335 44.000 0.00 0.00 0.00 3.93
3012 5031 5.237996 ACCCAAAAGAAAAACTCGTAGTAGC 59.762 40.000 0.00 0.00 0.00 3.58
3013 5032 6.480981 TCACCCAAAAGAAAAACTCGTAGTAG 59.519 38.462 0.00 0.00 0.00 2.57
3014 5033 6.347696 TCACCCAAAAGAAAAACTCGTAGTA 58.652 36.000 0.00 0.00 0.00 1.82
3015 5034 5.187687 TCACCCAAAAGAAAAACTCGTAGT 58.812 37.500 0.00 0.00 0.00 2.73
3016 5035 5.744666 TCACCCAAAAGAAAAACTCGTAG 57.255 39.130 0.00 0.00 0.00 3.51
3017 5036 6.702716 ATTCACCCAAAAGAAAAACTCGTA 57.297 33.333 0.00 0.00 0.00 3.43
3018 5037 5.592104 ATTCACCCAAAAGAAAAACTCGT 57.408 34.783 0.00 0.00 0.00 4.18
3019 5038 5.462068 GGAATTCACCCAAAAGAAAAACTCG 59.538 40.000 7.93 0.00 0.00 4.18
3020 5039 6.345298 TGGAATTCACCCAAAAGAAAAACTC 58.655 36.000 7.93 0.00 0.00 3.01
3021 5040 6.306643 TGGAATTCACCCAAAAGAAAAACT 57.693 33.333 7.93 0.00 0.00 2.66
3022 5041 8.846943 ATATGGAATTCACCCAAAAGAAAAAC 57.153 30.769 7.93 0.00 37.22 2.43
3025 5044 8.203485 GCATATATGGAATTCACCCAAAAGAAA 58.797 33.333 14.51 0.00 37.22 2.52
3026 5045 7.201992 GGCATATATGGAATTCACCCAAAAGAA 60.202 37.037 14.51 0.00 37.22 2.52
3027 5046 6.267471 GGCATATATGGAATTCACCCAAAAGA 59.733 38.462 14.51 0.00 37.22 2.52
3028 5047 6.041865 TGGCATATATGGAATTCACCCAAAAG 59.958 38.462 14.51 0.00 37.22 2.27
3029 5048 5.901853 TGGCATATATGGAATTCACCCAAAA 59.098 36.000 14.51 0.00 37.22 2.44
3030 5049 5.304101 GTGGCATATATGGAATTCACCCAAA 59.696 40.000 14.51 0.00 37.22 3.28
3031 5050 4.832266 GTGGCATATATGGAATTCACCCAA 59.168 41.667 14.51 0.00 37.22 4.12
3065 5084 2.367529 TGGCACATGAAGGTACGGA 58.632 52.632 0.00 0.00 0.00 4.69
3116 5135 3.889196 TCTGTACACGGTGCAAATTTC 57.111 42.857 8.30 0.00 0.00 2.17
3145 5164 1.468520 CTAACGGTCAAACTGGCCATG 59.531 52.381 5.51 0.98 43.88 3.66
3187 5206 1.886542 ACAGGGGCAAAATCGTCTTTC 59.113 47.619 0.00 0.00 0.00 2.62
3232 5253 6.375945 AAATTGGCCAAATTTGTTCAGAAC 57.624 33.333 24.71 6.32 44.94 3.01
3266 5287 1.639298 GGACGCTACAGTACGGACGT 61.639 60.000 11.45 11.45 36.30 4.34
3267 5288 1.061570 GGACGCTACAGTACGGACG 59.938 63.158 0.00 3.38 0.00 4.79
3390 5433 2.035321 TGACTTCCGAACAAATTTGGGC 59.965 45.455 21.74 11.90 39.63 5.36
3391 5434 4.314740 TTGACTTCCGAACAAATTTGGG 57.685 40.909 21.74 13.36 39.63 4.12
3392 5435 6.843069 ATTTTGACTTCCGAACAAATTTGG 57.157 33.333 21.74 4.58 40.47 3.28
3393 5436 8.174422 ACAAATTTTGACTTCCGAACAAATTTG 58.826 29.630 16.67 16.67 37.60 2.32
3394 5437 8.262715 ACAAATTTTGACTTCCGAACAAATTT 57.737 26.923 15.81 0.00 34.33 1.82
3395 5438 7.841915 ACAAATTTTGACTTCCGAACAAATT 57.158 28.000 15.81 0.00 34.33 1.82
3396 5439 7.253950 CGAACAAATTTTGACTTCCGAACAAAT 60.254 33.333 15.81 0.00 34.33 2.32
3397 5440 6.034044 CGAACAAATTTTGACTTCCGAACAAA 59.966 34.615 15.81 0.00 0.00 2.83
3398 5441 5.513495 CGAACAAATTTTGACTTCCGAACAA 59.487 36.000 15.81 0.00 0.00 2.83
3399 5442 5.031578 CGAACAAATTTTGACTTCCGAACA 58.968 37.500 15.81 0.00 0.00 3.18
3400 5443 4.085772 GCGAACAAATTTTGACTTCCGAAC 60.086 41.667 15.81 0.00 0.00 3.95
3401 5444 4.039032 GCGAACAAATTTTGACTTCCGAA 58.961 39.130 15.81 0.00 0.00 4.30
3402 5445 3.065510 TGCGAACAAATTTTGACTTCCGA 59.934 39.130 15.81 0.00 0.00 4.55
3403 5446 3.367607 TGCGAACAAATTTTGACTTCCG 58.632 40.909 15.81 11.01 0.00 4.30
3404 5447 5.905480 ATTGCGAACAAATTTTGACTTCC 57.095 34.783 15.81 5.48 39.77 3.46
3405 5448 9.695884 TTTAAATTGCGAACAAATTTTGACTTC 57.304 25.926 15.81 8.82 39.77 3.01
3477 5523 2.414957 GGTTACTTTCGAAATTGCGGGG 60.415 50.000 11.70 0.08 0.00 5.73
3495 5541 2.632512 AGCATTCCGGACAAATTTGGTT 59.367 40.909 21.74 1.89 0.00 3.67
3542 5588 2.286365 TGCAAAGACGATTTTCCCCT 57.714 45.000 0.00 0.00 0.00 4.79
3646 5692 5.327732 TCTGCCATTGGAAATTTCTCTCTT 58.672 37.500 17.42 0.00 0.00 2.85
3651 5697 5.769835 TCCTATCTGCCATTGGAAATTTCT 58.230 37.500 17.42 0.00 0.00 2.52
3718 5764 3.751175 TGTAAGTCCGCATGAGGAAAAAG 59.249 43.478 20.63 0.00 42.77 2.27
3722 5768 3.410631 TTTGTAAGTCCGCATGAGGAA 57.589 42.857 20.63 1.52 42.77 3.36
3723 5769 3.627395 ATTTGTAAGTCCGCATGAGGA 57.373 42.857 14.91 14.91 38.11 3.71
3724 5770 4.701956 AAATTTGTAAGTCCGCATGAGG 57.298 40.909 9.57 9.57 0.00 3.86
3725 5771 5.796935 CAGAAAATTTGTAAGTCCGCATGAG 59.203 40.000 0.00 0.00 0.00 2.90
3726 5772 5.335583 CCAGAAAATTTGTAAGTCCGCATGA 60.336 40.000 0.00 0.00 0.00 3.07
3727 5773 4.858692 CCAGAAAATTTGTAAGTCCGCATG 59.141 41.667 0.00 0.00 0.00 4.06
3728 5774 4.618227 GCCAGAAAATTTGTAAGTCCGCAT 60.618 41.667 0.00 0.00 0.00 4.73
3729 5775 3.305064 GCCAGAAAATTTGTAAGTCCGCA 60.305 43.478 0.00 0.00 0.00 5.69
3730 5776 3.242518 GCCAGAAAATTTGTAAGTCCGC 58.757 45.455 0.00 0.00 0.00 5.54
3731 5777 4.226761 GTGCCAGAAAATTTGTAAGTCCG 58.773 43.478 0.00 0.00 0.00 4.79
3732 5778 4.280929 AGGTGCCAGAAAATTTGTAAGTCC 59.719 41.667 0.00 0.00 0.00 3.85
3733 5779 5.009610 TCAGGTGCCAGAAAATTTGTAAGTC 59.990 40.000 0.00 0.00 0.00 3.01
3734 5780 4.892934 TCAGGTGCCAGAAAATTTGTAAGT 59.107 37.500 0.00 0.00 0.00 2.24
3735 5781 5.452078 TCAGGTGCCAGAAAATTTGTAAG 57.548 39.130 0.00 0.00 0.00 2.34
3736 5782 5.362430 AGTTCAGGTGCCAGAAAATTTGTAA 59.638 36.000 0.00 0.00 0.00 2.41
3737 5783 4.892934 AGTTCAGGTGCCAGAAAATTTGTA 59.107 37.500 0.00 0.00 0.00 2.41
3738 5784 3.706086 AGTTCAGGTGCCAGAAAATTTGT 59.294 39.130 0.00 0.00 0.00 2.83
3739 5785 4.326504 AGTTCAGGTGCCAGAAAATTTG 57.673 40.909 0.00 0.00 0.00 2.32
3740 5786 5.357742 AAAGTTCAGGTGCCAGAAAATTT 57.642 34.783 0.00 1.18 0.00 1.82
3741 5787 6.670695 ATAAAGTTCAGGTGCCAGAAAATT 57.329 33.333 0.00 0.42 0.00 1.82
3742 5788 6.670695 AATAAAGTTCAGGTGCCAGAAAAT 57.329 33.333 0.00 0.00 0.00 1.82
3743 5789 6.478512 AAATAAAGTTCAGGTGCCAGAAAA 57.521 33.333 0.00 0.00 0.00 2.29
3744 5790 6.208599 CCTAAATAAAGTTCAGGTGCCAGAAA 59.791 38.462 0.00 0.00 0.00 2.52
3745 5791 5.710099 CCTAAATAAAGTTCAGGTGCCAGAA 59.290 40.000 0.00 0.00 0.00 3.02
3746 5792 5.013704 TCCTAAATAAAGTTCAGGTGCCAGA 59.986 40.000 0.00 0.00 0.00 3.86
3747 5793 5.253330 TCCTAAATAAAGTTCAGGTGCCAG 58.747 41.667 0.00 0.00 0.00 4.85
3748 5794 5.249780 TCCTAAATAAAGTTCAGGTGCCA 57.750 39.130 0.00 0.00 0.00 4.92
3749 5795 6.775594 AATCCTAAATAAAGTTCAGGTGCC 57.224 37.500 0.00 0.00 0.00 5.01
3750 5796 8.303876 TCAAAATCCTAAATAAAGTTCAGGTGC 58.696 33.333 0.00 0.00 0.00 5.01
3758 5804 8.758829 GGGGATGTTCAAAATCCTAAATAAAGT 58.241 33.333 6.55 0.00 42.83 2.66
3759 5805 7.920682 CGGGGATGTTCAAAATCCTAAATAAAG 59.079 37.037 6.55 0.00 42.83 1.85
3760 5806 7.631811 GCGGGGATGTTCAAAATCCTAAATAAA 60.632 37.037 6.55 0.00 42.83 1.40
3761 5807 6.183360 GCGGGGATGTTCAAAATCCTAAATAA 60.183 38.462 6.55 0.00 42.83 1.40
3762 5808 5.300792 GCGGGGATGTTCAAAATCCTAAATA 59.699 40.000 6.55 0.00 42.83 1.40
3763 5809 4.099419 GCGGGGATGTTCAAAATCCTAAAT 59.901 41.667 6.55 0.00 42.83 1.40
3764 5810 3.445805 GCGGGGATGTTCAAAATCCTAAA 59.554 43.478 6.55 0.00 42.83 1.85
3765 5811 3.020984 GCGGGGATGTTCAAAATCCTAA 58.979 45.455 6.55 0.00 42.83 2.69
3766 5812 2.650322 GCGGGGATGTTCAAAATCCTA 58.350 47.619 6.55 0.00 42.83 2.94
3767 5813 1.474330 GCGGGGATGTTCAAAATCCT 58.526 50.000 6.55 0.00 42.83 3.24
3768 5814 0.459899 GGCGGGGATGTTCAAAATCC 59.540 55.000 0.00 0.00 42.57 3.01
3769 5815 0.100503 CGGCGGGGATGTTCAAAATC 59.899 55.000 0.00 0.00 0.00 2.17
3770 5816 0.610785 ACGGCGGGGATGTTCAAAAT 60.611 50.000 13.24 0.00 0.00 1.82
3771 5817 1.228306 ACGGCGGGGATGTTCAAAA 60.228 52.632 13.24 0.00 0.00 2.44
3772 5818 1.673009 GACGGCGGGGATGTTCAAA 60.673 57.895 13.24 0.00 0.00 2.69
3773 5819 2.046700 GACGGCGGGGATGTTCAA 60.047 61.111 13.24 0.00 0.00 2.69
3774 5820 2.665089 ATGACGGCGGGGATGTTCA 61.665 57.895 13.24 3.92 0.00 3.18
3775 5821 2.180204 CATGACGGCGGGGATGTTC 61.180 63.158 13.24 0.00 0.00 3.18
3776 5822 2.124736 CATGACGGCGGGGATGTT 60.125 61.111 13.24 0.00 0.00 2.71
3777 5823 4.175337 CCATGACGGCGGGGATGT 62.175 66.667 13.24 0.00 0.00 3.06
3801 5847 0.391263 GTTTCCAGTAGCCTCCACGG 60.391 60.000 0.00 0.00 0.00 4.94
3802 5848 0.736325 CGTTTCCAGTAGCCTCCACG 60.736 60.000 0.00 0.00 0.00 4.94
3803 5849 0.606604 TCGTTTCCAGTAGCCTCCAC 59.393 55.000 0.00 0.00 0.00 4.02
3804 5850 0.606604 GTCGTTTCCAGTAGCCTCCA 59.393 55.000 0.00 0.00 0.00 3.86
3805 5851 0.896226 AGTCGTTTCCAGTAGCCTCC 59.104 55.000 0.00 0.00 0.00 4.30
3806 5852 1.819903 AGAGTCGTTTCCAGTAGCCTC 59.180 52.381 0.00 0.00 0.00 4.70
3807 5853 1.546476 CAGAGTCGTTTCCAGTAGCCT 59.454 52.381 0.00 0.00 0.00 4.58
3808 5854 1.997669 CAGAGTCGTTTCCAGTAGCC 58.002 55.000 0.00 0.00 0.00 3.93
3809 5855 1.067495 AGCAGAGTCGTTTCCAGTAGC 60.067 52.381 0.00 0.00 0.00 3.58
3810 5856 2.490115 AGAGCAGAGTCGTTTCCAGTAG 59.510 50.000 0.00 0.00 0.00 2.57
3811 5857 2.488545 GAGAGCAGAGTCGTTTCCAGTA 59.511 50.000 0.00 0.00 0.00 2.74
3812 5858 1.271102 GAGAGCAGAGTCGTTTCCAGT 59.729 52.381 0.00 0.00 0.00 4.00
3813 5859 1.543802 AGAGAGCAGAGTCGTTTCCAG 59.456 52.381 0.00 0.00 0.00 3.86
3814 5860 1.621992 AGAGAGCAGAGTCGTTTCCA 58.378 50.000 0.00 0.00 0.00 3.53
3815 5861 2.750712 ACTAGAGAGCAGAGTCGTTTCC 59.249 50.000 0.00 0.00 0.00 3.13
3816 5862 4.428615 AACTAGAGAGCAGAGTCGTTTC 57.571 45.455 0.00 0.00 0.00 2.78
3817 5863 4.857509 AAACTAGAGAGCAGAGTCGTTT 57.142 40.909 0.00 0.00 0.00 3.60
3818 5864 5.961396 TTAAACTAGAGAGCAGAGTCGTT 57.039 39.130 0.00 0.00 0.00 3.85
3819 5865 5.648526 TGATTAAACTAGAGAGCAGAGTCGT 59.351 40.000 0.00 0.00 0.00 4.34
3820 5866 6.125327 TGATTAAACTAGAGAGCAGAGTCG 57.875 41.667 0.00 0.00 0.00 4.18
3821 5867 6.922957 CCATGATTAAACTAGAGAGCAGAGTC 59.077 42.308 0.00 0.00 0.00 3.36
3822 5868 6.609212 TCCATGATTAAACTAGAGAGCAGAGT 59.391 38.462 0.00 0.00 0.00 3.24
3823 5869 7.048629 TCCATGATTAAACTAGAGAGCAGAG 57.951 40.000 0.00 0.00 0.00 3.35
3824 5870 7.423844 TTCCATGATTAAACTAGAGAGCAGA 57.576 36.000 0.00 0.00 0.00 4.26
3825 5871 7.172875 CCATTCCATGATTAAACTAGAGAGCAG 59.827 40.741 0.00 0.00 0.00 4.24
3826 5872 6.994496 CCATTCCATGATTAAACTAGAGAGCA 59.006 38.462 0.00 0.00 0.00 4.26
3827 5873 6.995091 ACCATTCCATGATTAAACTAGAGAGC 59.005 38.462 0.00 0.00 0.00 4.09
3840 5886 9.944376 GTACAGTACAATATACCATTCCATGAT 57.056 33.333 5.79 0.00 0.00 2.45
3841 5887 8.372459 GGTACAGTACAATATACCATTCCATGA 58.628 37.037 12.89 0.00 37.59 3.07
3842 5888 8.154203 TGGTACAGTACAATATACCATTCCATG 58.846 37.037 12.89 0.00 41.67 3.66
3843 5889 8.270137 TGGTACAGTACAATATACCATTCCAT 57.730 34.615 12.89 0.00 41.67 3.41
3844 5890 7.678207 TGGTACAGTACAATATACCATTCCA 57.322 36.000 12.89 0.00 41.67 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.