Multiple sequence alignment - TraesCS2B01G369000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G369000 chr2B 100.000 2918 0 0 1 2918 526671943 526669026 0.000000e+00 5389.0
1 TraesCS2B01G369000 chr2A 93.298 2104 107 16 502 2586 590818293 590816205 0.000000e+00 3073.0
2 TraesCS2B01G369000 chr2A 81.223 1161 159 31 785 1928 590966462 590965344 0.000000e+00 881.0
3 TraesCS2B01G369000 chr2A 85.339 723 83 13 1221 1924 590974787 590974069 0.000000e+00 726.0
4 TraesCS2B01G369000 chr2A 91.988 337 20 1 2588 2917 590815926 590815590 1.580000e-127 466.0
5 TraesCS2B01G369000 chr2A 92.308 208 14 1 2713 2918 39930532 39930325 7.910000e-76 294.0
6 TraesCS2B01G369000 chr2A 92.308 208 14 1 2713 2918 402581859 402582066 7.910000e-76 294.0
7 TraesCS2B01G369000 chr2A 92.308 208 14 1 2713 2918 404511104 404511311 7.910000e-76 294.0
8 TraesCS2B01G369000 chr2A 89.130 138 14 1 329 466 590824063 590823927 1.390000e-38 171.0
9 TraesCS2B01G369000 chr2D 93.282 1697 79 16 502 2179 446653688 446652008 0.000000e+00 2470.0
10 TraesCS2B01G369000 chr2D 81.449 1132 152 26 803 1924 446697375 446696292 0.000000e+00 874.0
11 TraesCS2B01G369000 chr2D 81.338 1136 153 27 803 1928 446728043 446726957 0.000000e+00 869.0
12 TraesCS2B01G369000 chr2D 85.774 717 79 13 1221 1918 446932209 446932921 0.000000e+00 737.0
13 TraesCS2B01G369000 chr2D 93.103 203 13 1 2716 2918 446651708 446651507 2.200000e-76 296.0
14 TraesCS2B01G369000 chr2D 92.308 208 14 1 2713 2918 184276606 184276399 7.910000e-76 294.0
15 TraesCS2B01G369000 chr2D 92.308 208 14 1 2713 2918 540525368 540525161 7.910000e-76 294.0
16 TraesCS2B01G369000 chr2D 77.926 299 43 15 785 1079 446931917 446932196 6.470000e-37 165.0
17 TraesCS2B01G369000 chr6B 92.308 208 14 1 2713 2918 489712026 489712233 7.910000e-76 294.0
18 TraesCS2B01G369000 chr6B 78.431 408 77 10 1520 1917 439076740 439077146 3.730000e-64 255.0
19 TraesCS2B01G369000 chr5D 92.308 208 13 3 2713 2918 56559040 56559246 2.840000e-75 292.0
20 TraesCS2B01G369000 chr5D 87.931 58 5 1 2147 2204 559734320 559734375 1.880000e-07 67.6
21 TraesCS2B01G369000 chr6A 79.902 408 71 9 1520 1917 398167440 398167034 3.680000e-74 289.0
22 TraesCS2B01G369000 chr1B 84.034 119 15 4 1635 1751 108093287 108093171 8.550000e-21 111.0
23 TraesCS2B01G369000 chr1B 87.500 56 7 0 2148 2203 4638218 4638273 6.750000e-07 65.8
24 TraesCS2B01G369000 chr1B 100.000 28 0 0 1115 1142 567979654 567979627 5.000000e-03 52.8
25 TraesCS2B01G369000 chr1A 84.034 119 15 4 1635 1751 65664205 65664321 8.550000e-21 111.0
26 TraesCS2B01G369000 chr1A 100.000 28 0 0 1115 1142 516727170 516727143 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G369000 chr2B 526669026 526671943 2917 True 5389.0 5389 100.0000 1 2918 1 chr2B.!!$R1 2917
1 TraesCS2B01G369000 chr2A 590815590 590818293 2703 True 1769.5 3073 92.6430 502 2917 2 chr2A.!!$R5 2415
2 TraesCS2B01G369000 chr2A 590965344 590966462 1118 True 881.0 881 81.2230 785 1928 1 chr2A.!!$R3 1143
3 TraesCS2B01G369000 chr2A 590974069 590974787 718 True 726.0 726 85.3390 1221 1924 1 chr2A.!!$R4 703
4 TraesCS2B01G369000 chr2D 446651507 446653688 2181 True 1383.0 2470 93.1925 502 2918 2 chr2D.!!$R5 2416
5 TraesCS2B01G369000 chr2D 446696292 446697375 1083 True 874.0 874 81.4490 803 1924 1 chr2D.!!$R2 1121
6 TraesCS2B01G369000 chr2D 446726957 446728043 1086 True 869.0 869 81.3380 803 1928 1 chr2D.!!$R3 1125
7 TraesCS2B01G369000 chr2D 446931917 446932921 1004 False 451.0 737 81.8500 785 1918 2 chr2D.!!$F1 1133

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
264 265 0.032217 TTGATCCCCATTGAAGCCCC 60.032 55.0 0.0 0.0 0.0 5.80 F
287 288 0.035317 ACCAACGCTGCAATCTCTGA 59.965 50.0 0.0 0.0 0.0 3.27 F
646 647 0.037882 CTTGGAGAGAGAAGCACGCA 60.038 55.0 0.0 0.0 0.0 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1374 1400 0.483328 AGGCGGCTATCTCCCTCTTA 59.517 55.0 11.03 0.00 0.00 2.10 R
1410 1436 0.886490 ACTTACGTCCGGTCTCGTGT 60.886 55.0 23.52 15.05 40.50 4.49 R
2607 2951 0.035152 TTAGGTAGCGTCTCACCCGA 60.035 55.0 0.00 0.00 35.25 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.208022 CTACACATTATATTGGGTAGTGTGATG 57.792 37.037 21.32 3.54 44.87 3.07
31 32 6.486657 ACACATTATATTGGGTAGTGTGATGC 59.513 38.462 13.37 0.00 38.92 3.91
32 33 6.486320 CACATTATATTGGGTAGTGTGATGCA 59.514 38.462 0.00 0.00 38.10 3.96
43 44 3.619233 GTGTGATGCACCGTAAAAGTT 57.381 42.857 0.00 0.00 42.10 2.66
44 45 3.551551 GTGTGATGCACCGTAAAAGTTC 58.448 45.455 0.00 0.00 42.10 3.01
45 46 3.250040 GTGTGATGCACCGTAAAAGTTCT 59.750 43.478 0.00 0.00 42.10 3.01
46 47 3.496884 TGTGATGCACCGTAAAAGTTCTC 59.503 43.478 0.00 0.00 32.73 2.87
47 48 2.734606 TGATGCACCGTAAAAGTTCTCG 59.265 45.455 0.00 0.00 0.00 4.04
48 49 2.512485 TGCACCGTAAAAGTTCTCGA 57.488 45.000 0.00 0.00 0.00 4.04
49 50 2.400399 TGCACCGTAAAAGTTCTCGAG 58.600 47.619 5.93 5.93 0.00 4.04
50 51 1.725164 GCACCGTAAAAGTTCTCGAGG 59.275 52.381 13.56 0.00 0.00 4.63
51 52 2.608752 GCACCGTAAAAGTTCTCGAGGA 60.609 50.000 13.56 0.00 0.00 3.71
52 53 3.243336 CACCGTAAAAGTTCTCGAGGAG 58.757 50.000 13.56 0.00 0.00 3.69
53 54 2.889678 ACCGTAAAAGTTCTCGAGGAGT 59.110 45.455 13.56 3.25 0.00 3.85
54 55 3.320256 ACCGTAAAAGTTCTCGAGGAGTT 59.680 43.478 13.56 10.70 0.00 3.01
55 56 4.202192 ACCGTAAAAGTTCTCGAGGAGTTT 60.202 41.667 19.08 19.08 0.00 2.66
56 57 4.385146 CCGTAAAAGTTCTCGAGGAGTTTC 59.615 45.833 23.74 13.16 0.00 2.78
57 58 5.221130 CGTAAAAGTTCTCGAGGAGTTTCT 58.779 41.667 23.74 16.53 0.00 2.52
58 59 5.342791 CGTAAAAGTTCTCGAGGAGTTTCTC 59.657 44.000 23.74 17.98 0.00 2.87
59 60 4.939052 AAAGTTCTCGAGGAGTTTCTCA 57.061 40.909 19.08 0.00 33.59 3.27
60 61 3.926821 AGTTCTCGAGGAGTTTCTCAC 57.073 47.619 13.56 0.00 33.59 3.51
61 62 2.559231 AGTTCTCGAGGAGTTTCTCACC 59.441 50.000 13.56 0.00 33.59 4.02
62 63 1.166129 TCTCGAGGAGTTTCTCACCG 58.834 55.000 13.56 2.37 33.59 4.94
63 64 1.166129 CTCGAGGAGTTTCTCACCGA 58.834 55.000 3.91 10.37 35.70 4.69
64 65 1.131504 CTCGAGGAGTTTCTCACCGAG 59.868 57.143 3.91 17.73 42.40 4.63
65 66 0.456995 CGAGGAGTTTCTCACCGAGC 60.457 60.000 0.00 0.00 33.59 5.03
66 67 0.603569 GAGGAGTTTCTCACCGAGCA 59.396 55.000 0.00 0.00 34.13 4.26
67 68 1.000955 GAGGAGTTTCTCACCGAGCAA 59.999 52.381 0.00 0.00 34.13 3.91
68 69 1.149148 GGAGTTTCTCACCGAGCAAC 58.851 55.000 0.00 0.00 36.38 4.17
69 70 1.149148 GAGTTTCTCACCGAGCAACC 58.851 55.000 3.40 0.00 36.70 3.77
70 71 0.600255 AGTTTCTCACCGAGCAACCG 60.600 55.000 3.40 0.00 36.70 4.44
77 78 3.253955 CCGAGCAACCGGTTCTTG 58.746 61.111 19.24 19.33 44.23 3.02
78 79 1.597027 CCGAGCAACCGGTTCTTGT 60.597 57.895 19.24 1.38 44.23 3.16
79 80 1.569493 CGAGCAACCGGTTCTTGTG 59.431 57.895 19.24 8.02 0.00 3.33
80 81 0.878523 CGAGCAACCGGTTCTTGTGA 60.879 55.000 19.24 0.00 0.00 3.58
81 82 1.523758 GAGCAACCGGTTCTTGTGAT 58.476 50.000 19.24 4.98 0.00 3.06
82 83 1.880027 GAGCAACCGGTTCTTGTGATT 59.120 47.619 19.24 0.00 0.00 2.57
83 84 3.071479 GAGCAACCGGTTCTTGTGATTA 58.929 45.455 19.24 0.00 0.00 1.75
84 85 3.686016 AGCAACCGGTTCTTGTGATTAT 58.314 40.909 19.24 0.00 0.00 1.28
85 86 4.079253 AGCAACCGGTTCTTGTGATTATT 58.921 39.130 19.24 0.00 0.00 1.40
86 87 4.082787 AGCAACCGGTTCTTGTGATTATTG 60.083 41.667 19.24 2.92 0.00 1.90
87 88 4.165779 CAACCGGTTCTTGTGATTATTGC 58.834 43.478 19.24 0.00 0.00 3.56
88 89 2.752903 ACCGGTTCTTGTGATTATTGCC 59.247 45.455 0.00 0.00 0.00 4.52
89 90 2.223249 CCGGTTCTTGTGATTATTGCCG 60.223 50.000 0.00 0.00 36.82 5.69
90 91 2.223249 CGGTTCTTGTGATTATTGCCGG 60.223 50.000 0.00 0.00 33.87 6.13
91 92 3.013921 GGTTCTTGTGATTATTGCCGGA 58.986 45.455 5.05 0.00 0.00 5.14
92 93 3.442273 GGTTCTTGTGATTATTGCCGGAA 59.558 43.478 5.05 0.00 0.00 4.30
93 94 4.082463 GGTTCTTGTGATTATTGCCGGAAA 60.082 41.667 5.05 0.00 0.00 3.13
94 95 4.963276 TCTTGTGATTATTGCCGGAAAG 57.037 40.909 5.05 0.00 0.00 2.62
95 96 4.331968 TCTTGTGATTATTGCCGGAAAGT 58.668 39.130 5.05 0.00 0.00 2.66
96 97 4.764823 TCTTGTGATTATTGCCGGAAAGTT 59.235 37.500 5.05 0.00 0.00 2.66
97 98 5.242838 TCTTGTGATTATTGCCGGAAAGTTT 59.757 36.000 5.05 0.00 0.00 2.66
98 99 4.804108 TGTGATTATTGCCGGAAAGTTTG 58.196 39.130 5.05 0.00 0.00 2.93
99 100 4.279671 TGTGATTATTGCCGGAAAGTTTGT 59.720 37.500 5.05 0.00 0.00 2.83
100 101 4.621034 GTGATTATTGCCGGAAAGTTTGTG 59.379 41.667 5.05 0.00 0.00 3.33
101 102 4.520874 TGATTATTGCCGGAAAGTTTGTGA 59.479 37.500 5.05 0.00 0.00 3.58
102 103 4.920640 TTATTGCCGGAAAGTTTGTGAA 57.079 36.364 5.05 0.00 0.00 3.18
103 104 5.461032 TTATTGCCGGAAAGTTTGTGAAT 57.539 34.783 5.05 0.00 0.00 2.57
104 105 2.791383 TGCCGGAAAGTTTGTGAATG 57.209 45.000 5.05 0.00 0.00 2.67
105 106 2.028130 TGCCGGAAAGTTTGTGAATGT 58.972 42.857 5.05 0.00 0.00 2.71
106 107 2.428890 TGCCGGAAAGTTTGTGAATGTT 59.571 40.909 5.05 0.00 0.00 2.71
107 108 3.118956 TGCCGGAAAGTTTGTGAATGTTT 60.119 39.130 5.05 0.00 0.00 2.83
108 109 3.245048 GCCGGAAAGTTTGTGAATGTTTG 59.755 43.478 5.05 0.00 0.00 2.93
109 110 3.801594 CCGGAAAGTTTGTGAATGTTTGG 59.198 43.478 0.00 0.00 0.00 3.28
110 111 4.440802 CCGGAAAGTTTGTGAATGTTTGGA 60.441 41.667 0.00 0.00 0.00 3.53
111 112 4.739716 CGGAAAGTTTGTGAATGTTTGGAG 59.260 41.667 0.00 0.00 0.00 3.86
112 113 5.049828 GGAAAGTTTGTGAATGTTTGGAGG 58.950 41.667 0.00 0.00 0.00 4.30
113 114 3.733443 AGTTTGTGAATGTTTGGAGGC 57.267 42.857 0.00 0.00 0.00 4.70
114 115 2.365293 AGTTTGTGAATGTTTGGAGGCC 59.635 45.455 0.00 0.00 0.00 5.19
115 116 2.079170 TTGTGAATGTTTGGAGGCCA 57.921 45.000 5.01 0.00 0.00 5.36
116 117 1.327303 TGTGAATGTTTGGAGGCCAC 58.673 50.000 5.01 0.00 30.78 5.01
117 118 0.603065 GTGAATGTTTGGAGGCCACC 59.397 55.000 13.09 13.09 30.78 4.61
118 119 0.482446 TGAATGTTTGGAGGCCACCT 59.518 50.000 20.77 0.00 36.03 4.00
128 129 2.436115 GGCCACCTCAACGCCTAC 60.436 66.667 0.00 0.00 39.70 3.18
129 130 2.436115 GCCACCTCAACGCCTACC 60.436 66.667 0.00 0.00 0.00 3.18
130 131 3.065306 CCACCTCAACGCCTACCA 58.935 61.111 0.00 0.00 0.00 3.25
131 132 1.079127 CCACCTCAACGCCTACCAG 60.079 63.158 0.00 0.00 0.00 4.00
132 133 1.671742 CACCTCAACGCCTACCAGT 59.328 57.895 0.00 0.00 0.00 4.00
133 134 0.892755 CACCTCAACGCCTACCAGTA 59.107 55.000 0.00 0.00 0.00 2.74
134 135 1.135083 CACCTCAACGCCTACCAGTAG 60.135 57.143 0.00 0.00 0.00 2.57
135 136 1.183549 CCTCAACGCCTACCAGTAGT 58.816 55.000 4.23 0.00 0.00 2.73
136 137 1.135083 CCTCAACGCCTACCAGTAGTG 60.135 57.143 4.23 0.00 0.00 2.74
149 150 3.411446 CCAGTAGTGGTTGAGAATTGCA 58.589 45.455 8.59 0.00 39.30 4.08
150 151 4.012374 CCAGTAGTGGTTGAGAATTGCAT 58.988 43.478 8.59 0.00 39.30 3.96
151 152 4.460382 CCAGTAGTGGTTGAGAATTGCATT 59.540 41.667 8.59 0.00 39.30 3.56
152 153 5.047802 CCAGTAGTGGTTGAGAATTGCATTT 60.048 40.000 8.59 0.00 39.30 2.32
153 154 6.150976 CCAGTAGTGGTTGAGAATTGCATTTA 59.849 38.462 8.59 0.00 39.30 1.40
154 155 7.148018 CCAGTAGTGGTTGAGAATTGCATTTAT 60.148 37.037 8.59 0.00 39.30 1.40
155 156 8.246180 CAGTAGTGGTTGAGAATTGCATTTATT 58.754 33.333 0.00 0.00 0.00 1.40
156 157 8.246180 AGTAGTGGTTGAGAATTGCATTTATTG 58.754 33.333 0.00 0.00 0.00 1.90
157 158 6.996509 AGTGGTTGAGAATTGCATTTATTGT 58.003 32.000 0.00 0.00 0.00 2.71
158 159 6.869913 AGTGGTTGAGAATTGCATTTATTGTG 59.130 34.615 0.00 0.00 0.00 3.33
159 160 6.867816 GTGGTTGAGAATTGCATTTATTGTGA 59.132 34.615 0.00 0.00 0.00 3.58
160 161 7.546667 GTGGTTGAGAATTGCATTTATTGTGAT 59.453 33.333 0.00 0.00 0.00 3.06
161 162 8.747471 TGGTTGAGAATTGCATTTATTGTGATA 58.253 29.630 0.00 0.00 0.00 2.15
162 163 9.754382 GGTTGAGAATTGCATTTATTGTGATAT 57.246 29.630 0.00 0.00 0.00 1.63
166 167 9.539139 GAGAATTGCATTTATTGTGATATCTCG 57.461 33.333 3.98 0.00 0.00 4.04
167 168 8.509690 AGAATTGCATTTATTGTGATATCTCGG 58.490 33.333 3.98 0.00 0.00 4.63
168 169 6.558771 TTGCATTTATTGTGATATCTCGGG 57.441 37.500 3.98 0.00 0.00 5.14
169 170 5.863965 TGCATTTATTGTGATATCTCGGGA 58.136 37.500 3.98 0.00 0.00 5.14
170 171 6.295249 TGCATTTATTGTGATATCTCGGGAA 58.705 36.000 3.98 0.00 0.00 3.97
171 172 6.427853 TGCATTTATTGTGATATCTCGGGAAG 59.572 38.462 3.98 0.00 0.00 3.46
172 173 6.650807 GCATTTATTGTGATATCTCGGGAAGA 59.349 38.462 3.98 0.00 38.72 2.87
173 174 7.173218 GCATTTATTGTGATATCTCGGGAAGAA 59.827 37.037 3.98 0.00 37.61 2.52
174 175 9.224267 CATTTATTGTGATATCTCGGGAAGAAT 57.776 33.333 3.98 0.00 37.61 2.40
176 177 9.929180 TTTATTGTGATATCTCGGGAAGAATAG 57.071 33.333 3.98 0.00 37.61 1.73
177 178 7.782897 ATTGTGATATCTCGGGAAGAATAGA 57.217 36.000 3.98 0.00 37.61 1.98
178 179 6.825944 TGTGATATCTCGGGAAGAATAGAG 57.174 41.667 3.98 0.00 37.61 2.43
179 180 6.307776 TGTGATATCTCGGGAAGAATAGAGT 58.692 40.000 3.98 0.00 37.61 3.24
180 181 6.207614 TGTGATATCTCGGGAAGAATAGAGTG 59.792 42.308 3.98 0.00 37.61 3.51
181 182 6.431543 GTGATATCTCGGGAAGAATAGAGTGA 59.568 42.308 3.98 0.00 37.61 3.41
182 183 6.657117 TGATATCTCGGGAAGAATAGAGTGAG 59.343 42.308 3.98 0.00 37.61 3.51
183 184 4.237976 TCTCGGGAAGAATAGAGTGAGT 57.762 45.455 0.00 0.00 32.90 3.41
184 185 4.601084 TCTCGGGAAGAATAGAGTGAGTT 58.399 43.478 0.00 0.00 32.90 3.01
185 186 5.017490 TCTCGGGAAGAATAGAGTGAGTTT 58.983 41.667 0.00 0.00 32.90 2.66
186 187 5.125739 TCTCGGGAAGAATAGAGTGAGTTTC 59.874 44.000 0.00 0.00 32.90 2.78
187 188 4.159879 TCGGGAAGAATAGAGTGAGTTTCC 59.840 45.833 0.00 0.00 33.54 3.13
188 189 4.434520 GGGAAGAATAGAGTGAGTTTCCG 58.565 47.826 0.00 0.00 34.78 4.30
189 190 4.081586 GGGAAGAATAGAGTGAGTTTCCGT 60.082 45.833 0.00 0.00 34.78 4.69
190 191 4.865365 GGAAGAATAGAGTGAGTTTCCGTG 59.135 45.833 0.00 0.00 0.00 4.94
191 192 4.457834 AGAATAGAGTGAGTTTCCGTGG 57.542 45.455 0.00 0.00 0.00 4.94
192 193 3.833070 AGAATAGAGTGAGTTTCCGTGGT 59.167 43.478 0.00 0.00 0.00 4.16
193 194 3.594603 ATAGAGTGAGTTTCCGTGGTG 57.405 47.619 0.00 0.00 0.00 4.17
194 195 1.120530 AGAGTGAGTTTCCGTGGTGT 58.879 50.000 0.00 0.00 0.00 4.16
195 196 1.485066 AGAGTGAGTTTCCGTGGTGTT 59.515 47.619 0.00 0.00 0.00 3.32
196 197 1.597663 GAGTGAGTTTCCGTGGTGTTG 59.402 52.381 0.00 0.00 0.00 3.33
197 198 1.208535 AGTGAGTTTCCGTGGTGTTGA 59.791 47.619 0.00 0.00 0.00 3.18
198 199 2.011222 GTGAGTTTCCGTGGTGTTGAA 58.989 47.619 0.00 0.00 0.00 2.69
199 200 2.011222 TGAGTTTCCGTGGTGTTGAAC 58.989 47.619 0.00 0.00 0.00 3.18
208 209 1.008538 GGTGTTGAACCTGCAAGCG 60.009 57.895 0.00 0.00 46.55 4.68
209 210 1.724582 GGTGTTGAACCTGCAAGCGT 61.725 55.000 0.00 0.00 46.55 5.07
210 211 0.941542 GTGTTGAACCTGCAAGCGTA 59.058 50.000 0.00 0.00 0.00 4.42
211 212 1.535462 GTGTTGAACCTGCAAGCGTAT 59.465 47.619 0.00 0.00 0.00 3.06
212 213 2.739913 GTGTTGAACCTGCAAGCGTATA 59.260 45.455 0.00 0.00 0.00 1.47
213 214 3.000041 TGTTGAACCTGCAAGCGTATAG 59.000 45.455 0.00 0.00 0.00 1.31
214 215 2.309528 TGAACCTGCAAGCGTATAGG 57.690 50.000 0.00 0.00 36.39 2.57
215 216 1.134521 TGAACCTGCAAGCGTATAGGG 60.135 52.381 6.37 0.00 34.60 3.53
216 217 0.463833 AACCTGCAAGCGTATAGGGC 60.464 55.000 6.37 0.00 34.60 5.19
217 218 1.338136 ACCTGCAAGCGTATAGGGCT 61.338 55.000 6.37 0.00 44.02 5.19
218 219 0.679505 CCTGCAAGCGTATAGGGCTA 59.320 55.000 0.00 0.00 40.53 3.93
219 220 1.276421 CCTGCAAGCGTATAGGGCTAT 59.724 52.381 0.00 0.00 40.53 2.97
220 221 2.341257 CTGCAAGCGTATAGGGCTATG 58.659 52.381 0.00 2.54 40.53 2.23
221 222 1.001974 TGCAAGCGTATAGGGCTATGG 59.998 52.381 0.00 0.00 40.53 2.74
222 223 1.726853 CAAGCGTATAGGGCTATGGC 58.273 55.000 0.00 0.00 40.53 4.40
223 224 1.001974 CAAGCGTATAGGGCTATGGCA 59.998 52.381 2.58 0.00 40.53 4.92
224 225 1.348064 AGCGTATAGGGCTATGGCAA 58.652 50.000 2.58 0.00 39.39 4.52
225 226 1.909302 AGCGTATAGGGCTATGGCAAT 59.091 47.619 2.58 0.00 39.39 3.56
226 227 2.305927 AGCGTATAGGGCTATGGCAATT 59.694 45.455 2.58 0.00 39.39 2.32
227 228 2.678336 GCGTATAGGGCTATGGCAATTC 59.322 50.000 2.58 0.00 40.87 2.17
228 229 2.930040 CGTATAGGGCTATGGCAATTCG 59.070 50.000 2.58 0.00 40.87 3.34
229 230 3.616560 CGTATAGGGCTATGGCAATTCGT 60.617 47.826 2.58 0.00 40.87 3.85
230 231 2.254546 TAGGGCTATGGCAATTCGTG 57.745 50.000 2.58 0.00 40.87 4.35
231 232 0.466189 AGGGCTATGGCAATTCGTGG 60.466 55.000 2.58 0.00 40.87 4.94
232 233 0.751643 GGGCTATGGCAATTCGTGGT 60.752 55.000 2.58 0.00 40.87 4.16
233 234 1.476110 GGGCTATGGCAATTCGTGGTA 60.476 52.381 2.58 0.00 40.87 3.25
234 235 2.294074 GGCTATGGCAATTCGTGGTAA 58.706 47.619 2.58 0.00 40.87 2.85
235 236 2.290641 GGCTATGGCAATTCGTGGTAAG 59.709 50.000 2.58 0.00 40.87 2.34
236 237 2.943033 GCTATGGCAATTCGTGGTAAGT 59.057 45.455 0.00 0.00 38.54 2.24
237 238 4.124238 GCTATGGCAATTCGTGGTAAGTA 58.876 43.478 0.00 0.00 38.54 2.24
238 239 4.211374 GCTATGGCAATTCGTGGTAAGTAG 59.789 45.833 0.00 0.00 38.54 2.57
239 240 3.965379 TGGCAATTCGTGGTAAGTAGA 57.035 42.857 0.00 0.00 0.00 2.59
240 241 3.857052 TGGCAATTCGTGGTAAGTAGAG 58.143 45.455 0.00 0.00 0.00 2.43
241 242 3.259876 TGGCAATTCGTGGTAAGTAGAGT 59.740 43.478 0.00 0.00 0.00 3.24
242 243 4.251268 GGCAATTCGTGGTAAGTAGAGTT 58.749 43.478 0.00 0.00 0.00 3.01
243 244 4.694037 GGCAATTCGTGGTAAGTAGAGTTT 59.306 41.667 0.00 0.00 0.00 2.66
244 245 5.390567 GGCAATTCGTGGTAAGTAGAGTTTG 60.391 44.000 0.00 0.00 0.00 2.93
245 246 5.178809 GCAATTCGTGGTAAGTAGAGTTTGT 59.821 40.000 0.00 0.00 0.00 2.83
246 247 6.293244 GCAATTCGTGGTAAGTAGAGTTTGTT 60.293 38.462 0.00 0.00 0.00 2.83
247 248 6.780706 ATTCGTGGTAAGTAGAGTTTGTTG 57.219 37.500 0.00 0.00 0.00 3.33
248 249 5.518848 TCGTGGTAAGTAGAGTTTGTTGA 57.481 39.130 0.00 0.00 0.00 3.18
249 250 6.092955 TCGTGGTAAGTAGAGTTTGTTGAT 57.907 37.500 0.00 0.00 0.00 2.57
250 251 6.154445 TCGTGGTAAGTAGAGTTTGTTGATC 58.846 40.000 0.00 0.00 0.00 2.92
251 252 5.347907 CGTGGTAAGTAGAGTTTGTTGATCC 59.652 44.000 0.00 0.00 0.00 3.36
252 253 5.642491 GTGGTAAGTAGAGTTTGTTGATCCC 59.358 44.000 0.00 0.00 0.00 3.85
253 254 5.183969 GGTAAGTAGAGTTTGTTGATCCCC 58.816 45.833 0.00 0.00 0.00 4.81
254 255 4.993705 AAGTAGAGTTTGTTGATCCCCA 57.006 40.909 0.00 0.00 0.00 4.96
255 256 5.520748 AAGTAGAGTTTGTTGATCCCCAT 57.479 39.130 0.00 0.00 0.00 4.00
256 257 5.520748 AGTAGAGTTTGTTGATCCCCATT 57.479 39.130 0.00 0.00 0.00 3.16
257 258 5.256474 AGTAGAGTTTGTTGATCCCCATTG 58.744 41.667 0.00 0.00 0.00 2.82
258 259 4.387026 AGAGTTTGTTGATCCCCATTGA 57.613 40.909 0.00 0.00 0.00 2.57
259 260 4.739793 AGAGTTTGTTGATCCCCATTGAA 58.260 39.130 0.00 0.00 0.00 2.69
260 261 4.768968 AGAGTTTGTTGATCCCCATTGAAG 59.231 41.667 0.00 0.00 0.00 3.02
261 262 3.259123 AGTTTGTTGATCCCCATTGAAGC 59.741 43.478 0.00 0.00 0.00 3.86
262 263 1.851304 TGTTGATCCCCATTGAAGCC 58.149 50.000 0.00 0.00 0.00 4.35
263 264 1.114627 GTTGATCCCCATTGAAGCCC 58.885 55.000 0.00 0.00 0.00 5.19
264 265 0.032217 TTGATCCCCATTGAAGCCCC 60.032 55.000 0.00 0.00 0.00 5.80
265 266 1.152461 GATCCCCATTGAAGCCCCC 60.152 63.158 0.00 0.00 0.00 5.40
266 267 1.940742 ATCCCCATTGAAGCCCCCA 60.941 57.895 0.00 0.00 0.00 4.96
267 268 2.242408 ATCCCCATTGAAGCCCCCAC 62.242 60.000 0.00 0.00 0.00 4.61
268 269 2.444696 CCCATTGAAGCCCCCACA 59.555 61.111 0.00 0.00 0.00 4.17
269 270 1.984026 CCCATTGAAGCCCCCACAC 60.984 63.158 0.00 0.00 0.00 3.82
270 271 1.984026 CCATTGAAGCCCCCACACC 60.984 63.158 0.00 0.00 0.00 4.16
271 272 1.228831 CATTGAAGCCCCCACACCA 60.229 57.895 0.00 0.00 0.00 4.17
272 273 0.831288 CATTGAAGCCCCCACACCAA 60.831 55.000 0.00 0.00 0.00 3.67
273 274 0.831711 ATTGAAGCCCCCACACCAAC 60.832 55.000 0.00 0.00 0.00 3.77
274 275 2.983592 GAAGCCCCCACACCAACG 60.984 66.667 0.00 0.00 0.00 4.10
280 281 3.215568 CCCACACCAACGCTGCAA 61.216 61.111 0.00 0.00 0.00 4.08
281 282 2.563798 CCCACACCAACGCTGCAAT 61.564 57.895 0.00 0.00 0.00 3.56
282 283 1.081242 CCACACCAACGCTGCAATC 60.081 57.895 0.00 0.00 0.00 2.67
283 284 1.518056 CCACACCAACGCTGCAATCT 61.518 55.000 0.00 0.00 0.00 2.40
284 285 0.110056 CACACCAACGCTGCAATCTC 60.110 55.000 0.00 0.00 0.00 2.75
285 286 0.250467 ACACCAACGCTGCAATCTCT 60.250 50.000 0.00 0.00 0.00 3.10
286 287 0.167470 CACCAACGCTGCAATCTCTG 59.833 55.000 0.00 0.00 0.00 3.35
287 288 0.035317 ACCAACGCTGCAATCTCTGA 59.965 50.000 0.00 0.00 0.00 3.27
288 289 0.445436 CCAACGCTGCAATCTCTGAC 59.555 55.000 0.00 0.00 0.00 3.51
289 290 1.150827 CAACGCTGCAATCTCTGACA 58.849 50.000 0.00 0.00 0.00 3.58
290 291 1.136141 CAACGCTGCAATCTCTGACAC 60.136 52.381 0.00 0.00 0.00 3.67
291 292 0.671781 ACGCTGCAATCTCTGACACC 60.672 55.000 0.00 0.00 0.00 4.16
292 293 1.364626 CGCTGCAATCTCTGACACCC 61.365 60.000 0.00 0.00 0.00 4.61
293 294 1.364626 GCTGCAATCTCTGACACCCG 61.365 60.000 0.00 0.00 0.00 5.28
294 295 0.742281 CTGCAATCTCTGACACCCGG 60.742 60.000 0.00 0.00 0.00 5.73
295 296 1.191489 TGCAATCTCTGACACCCGGA 61.191 55.000 0.73 0.00 0.00 5.14
301 302 3.261250 TCTGACACCCGGAGACTAC 57.739 57.895 0.73 0.00 0.00 2.73
302 303 0.697079 TCTGACACCCGGAGACTACT 59.303 55.000 0.73 0.00 0.00 2.57
303 304 1.075050 TCTGACACCCGGAGACTACTT 59.925 52.381 0.73 0.00 0.00 2.24
304 305 2.306805 TCTGACACCCGGAGACTACTTA 59.693 50.000 0.73 0.00 0.00 2.24
305 306 3.053842 TCTGACACCCGGAGACTACTTAT 60.054 47.826 0.73 0.00 0.00 1.73
306 307 3.700038 CTGACACCCGGAGACTACTTATT 59.300 47.826 0.73 0.00 0.00 1.40
307 308 4.091549 TGACACCCGGAGACTACTTATTT 58.908 43.478 0.73 0.00 0.00 1.40
308 309 4.529377 TGACACCCGGAGACTACTTATTTT 59.471 41.667 0.73 0.00 0.00 1.82
309 310 5.012354 TGACACCCGGAGACTACTTATTTTT 59.988 40.000 0.73 0.00 0.00 1.94
325 326 2.080654 TTTTTGGGGGTCAACAGGAG 57.919 50.000 0.00 0.00 34.67 3.69
326 327 1.227249 TTTTGGGGGTCAACAGGAGA 58.773 50.000 0.00 0.00 34.67 3.71
327 328 1.455822 TTTGGGGGTCAACAGGAGAT 58.544 50.000 0.00 0.00 34.67 2.75
328 329 1.455822 TTGGGGGTCAACAGGAGATT 58.544 50.000 0.00 0.00 0.00 2.40
329 330 2.352561 TGGGGGTCAACAGGAGATTA 57.647 50.000 0.00 0.00 0.00 1.75
330 331 1.913419 TGGGGGTCAACAGGAGATTAC 59.087 52.381 0.00 0.00 0.00 1.89
331 332 2.197465 GGGGGTCAACAGGAGATTACT 58.803 52.381 0.00 0.00 0.00 2.24
332 333 2.576648 GGGGGTCAACAGGAGATTACTT 59.423 50.000 0.00 0.00 0.00 2.24
333 334 3.778629 GGGGGTCAACAGGAGATTACTTA 59.221 47.826 0.00 0.00 0.00 2.24
334 335 4.412528 GGGGGTCAACAGGAGATTACTTAT 59.587 45.833 0.00 0.00 0.00 1.73
335 336 5.104067 GGGGGTCAACAGGAGATTACTTATT 60.104 44.000 0.00 0.00 0.00 1.40
336 337 6.424032 GGGGTCAACAGGAGATTACTTATTT 58.576 40.000 0.00 0.00 0.00 1.40
337 338 7.366191 GGGGGTCAACAGGAGATTACTTATTTA 60.366 40.741 0.00 0.00 0.00 1.40
338 339 8.218488 GGGGTCAACAGGAGATTACTTATTTAT 58.782 37.037 0.00 0.00 0.00 1.40
339 340 9.274206 GGGTCAACAGGAGATTACTTATTTATC 57.726 37.037 0.00 0.00 0.00 1.75
340 341 8.979574 GGTCAACAGGAGATTACTTATTTATCG 58.020 37.037 0.00 0.00 0.00 2.92
341 342 9.530633 GTCAACAGGAGATTACTTATTTATCGT 57.469 33.333 0.00 0.00 0.00 3.73
342 343 9.529325 TCAACAGGAGATTACTTATTTATCGTG 57.471 33.333 0.00 0.00 0.00 4.35
343 344 8.765219 CAACAGGAGATTACTTATTTATCGTGG 58.235 37.037 0.00 0.00 0.00 4.94
344 345 8.246430 ACAGGAGATTACTTATTTATCGTGGA 57.754 34.615 0.00 0.00 0.00 4.02
345 346 8.701895 ACAGGAGATTACTTATTTATCGTGGAA 58.298 33.333 0.00 0.00 0.00 3.53
346 347 9.712305 CAGGAGATTACTTATTTATCGTGGAAT 57.288 33.333 0.00 0.00 0.00 3.01
347 348 9.712305 AGGAGATTACTTATTTATCGTGGAATG 57.288 33.333 0.00 0.00 0.00 2.67
348 349 8.936864 GGAGATTACTTATTTATCGTGGAATGG 58.063 37.037 0.00 0.00 0.00 3.16
349 350 8.324163 AGATTACTTATTTATCGTGGAATGGC 57.676 34.615 0.00 0.00 0.00 4.40
350 351 6.870971 TTACTTATTTATCGTGGAATGGCC 57.129 37.500 0.00 0.00 37.10 5.36
351 352 4.142038 ACTTATTTATCGTGGAATGGCCC 58.858 43.478 0.00 0.00 34.97 5.80
352 353 2.746279 ATTTATCGTGGAATGGCCCA 57.254 45.000 0.00 0.00 34.97 5.36
353 354 2.516227 TTTATCGTGGAATGGCCCAA 57.484 45.000 0.00 0.00 38.06 4.12
354 355 1.757682 TTATCGTGGAATGGCCCAAC 58.242 50.000 0.00 0.00 38.06 3.77
355 356 0.916086 TATCGTGGAATGGCCCAACT 59.084 50.000 0.00 0.00 38.06 3.16
356 357 0.039618 ATCGTGGAATGGCCCAACTT 59.960 50.000 0.00 0.00 38.06 2.66
357 358 0.178975 TCGTGGAATGGCCCAACTTT 60.179 50.000 0.00 0.00 38.06 2.66
358 359 0.678950 CGTGGAATGGCCCAACTTTT 59.321 50.000 0.00 0.00 38.06 2.27
359 360 1.336795 CGTGGAATGGCCCAACTTTTC 60.337 52.381 0.00 0.00 38.06 2.29
360 361 1.001974 GTGGAATGGCCCAACTTTTCC 59.998 52.381 6.86 6.86 38.06 3.13
361 362 1.347062 GGAATGGCCCAACTTTTCCA 58.653 50.000 8.65 0.00 0.00 3.53
362 363 1.908619 GGAATGGCCCAACTTTTCCAT 59.091 47.619 8.65 0.00 40.77 3.41
363 364 3.103742 GGAATGGCCCAACTTTTCCATA 58.896 45.455 8.65 0.00 38.28 2.74
364 365 3.132824 GGAATGGCCCAACTTTTCCATAG 59.867 47.826 8.65 0.00 38.28 2.23
365 366 2.990740 TGGCCCAACTTTTCCATAGT 57.009 45.000 0.00 0.00 0.00 2.12
366 367 2.524306 TGGCCCAACTTTTCCATAGTG 58.476 47.619 0.00 0.00 0.00 2.74
367 368 1.824852 GGCCCAACTTTTCCATAGTGG 59.175 52.381 0.00 0.00 39.43 4.00
368 369 1.824852 GCCCAACTTTTCCATAGTGGG 59.175 52.381 2.02 2.02 38.32 4.61
370 371 3.169512 CCAACTTTTCCATAGTGGGGT 57.830 47.619 0.00 0.00 38.32 4.95
371 372 2.825532 CCAACTTTTCCATAGTGGGGTG 59.174 50.000 0.00 0.00 38.32 4.61
372 373 2.825532 CAACTTTTCCATAGTGGGGTGG 59.174 50.000 0.00 0.00 38.32 4.61
373 374 1.272480 ACTTTTCCATAGTGGGGTGGC 60.272 52.381 0.00 0.00 38.32 5.01
374 375 0.040499 TTTTCCATAGTGGGGTGGCC 59.960 55.000 0.00 0.00 38.32 5.36
375 376 1.143329 TTTCCATAGTGGGGTGGCCA 61.143 55.000 0.00 0.00 38.32 5.36
376 377 0.923729 TTCCATAGTGGGGTGGCCAT 60.924 55.000 9.72 0.00 38.32 4.40
377 378 1.152694 CCATAGTGGGGTGGCCATG 60.153 63.158 9.72 0.00 32.67 3.66
378 379 1.644437 CCATAGTGGGGTGGCCATGA 61.644 60.000 9.72 0.00 32.67 3.07
379 380 0.258484 CATAGTGGGGTGGCCATGAA 59.742 55.000 9.72 0.00 0.00 2.57
380 381 1.006813 ATAGTGGGGTGGCCATGAAA 58.993 50.000 9.72 0.00 0.00 2.69
381 382 0.331278 TAGTGGGGTGGCCATGAAAG 59.669 55.000 9.72 0.00 0.00 2.62
382 383 1.228862 GTGGGGTGGCCATGAAAGT 60.229 57.895 9.72 0.00 0.00 2.66
383 384 1.076549 TGGGGTGGCCATGAAAGTC 59.923 57.895 9.72 0.00 0.00 3.01
384 385 1.384191 GGGGTGGCCATGAAAGTCT 59.616 57.895 9.72 0.00 0.00 3.24
385 386 0.251787 GGGGTGGCCATGAAAGTCTT 60.252 55.000 9.72 0.00 0.00 3.01
386 387 1.177401 GGGTGGCCATGAAAGTCTTC 58.823 55.000 9.72 0.00 0.00 2.87
387 388 1.177401 GGTGGCCATGAAAGTCTTCC 58.823 55.000 9.72 0.00 0.00 3.46
388 389 1.272147 GGTGGCCATGAAAGTCTTCCT 60.272 52.381 9.72 0.00 0.00 3.36
389 390 2.519013 GTGGCCATGAAAGTCTTCCTT 58.481 47.619 9.72 0.00 33.79 3.36
390 391 2.893489 GTGGCCATGAAAGTCTTCCTTT 59.107 45.455 9.72 0.00 46.11 3.11
402 403 5.828299 AGTCTTCCTTTCTAGACTGATCG 57.172 43.478 4.11 0.00 46.93 3.69
403 404 5.502079 AGTCTTCCTTTCTAGACTGATCGA 58.498 41.667 4.11 0.00 46.93 3.59
404 405 5.588648 AGTCTTCCTTTCTAGACTGATCGAG 59.411 44.000 4.11 0.00 46.93 4.04
405 406 4.884744 TCTTCCTTTCTAGACTGATCGAGG 59.115 45.833 0.00 0.00 0.00 4.63
406 407 3.556999 TCCTTTCTAGACTGATCGAGGG 58.443 50.000 0.00 0.00 0.00 4.30
407 408 2.625790 CCTTTCTAGACTGATCGAGGGG 59.374 54.545 0.00 0.00 0.00 4.79
408 409 2.366640 TTCTAGACTGATCGAGGGGG 57.633 55.000 0.00 0.00 0.00 5.40
409 410 1.519498 TCTAGACTGATCGAGGGGGA 58.481 55.000 0.00 0.00 0.00 4.81
410 411 1.850998 TCTAGACTGATCGAGGGGGAA 59.149 52.381 0.00 0.00 0.00 3.97
411 412 1.957877 CTAGACTGATCGAGGGGGAAC 59.042 57.143 0.00 0.00 0.00 3.62
412 413 0.041238 AGACTGATCGAGGGGGAACA 59.959 55.000 0.00 0.00 0.00 3.18
413 414 0.175989 GACTGATCGAGGGGGAACAC 59.824 60.000 0.00 0.00 0.00 3.32
414 415 1.141881 CTGATCGAGGGGGAACACG 59.858 63.158 0.00 0.00 40.46 4.49
415 416 2.202892 GATCGAGGGGGAACACGC 60.203 66.667 0.00 0.00 40.46 5.34
416 417 3.000819 ATCGAGGGGGAACACGCA 61.001 61.111 0.00 0.00 40.46 5.24
417 418 2.311688 GATCGAGGGGGAACACGCAT 62.312 60.000 0.00 0.00 40.46 4.73
418 419 2.593468 ATCGAGGGGGAACACGCATG 62.593 60.000 0.00 0.00 40.46 4.06
419 420 2.351276 GAGGGGGAACACGCATGT 59.649 61.111 0.00 0.00 42.46 3.21
420 421 1.600107 GAGGGGGAACACGCATGTA 59.400 57.895 0.00 0.00 38.45 2.29
421 422 0.743345 GAGGGGGAACACGCATGTAC 60.743 60.000 0.00 0.00 38.45 2.90
422 423 2.104253 GGGGGAACACGCATGTACG 61.104 63.158 0.00 0.00 38.45 3.67
423 424 2.746803 GGGGAACACGCATGTACGC 61.747 63.158 0.00 0.00 38.45 4.42
424 425 1.740296 GGGAACACGCATGTACGCT 60.740 57.895 0.00 0.00 38.45 5.07
425 426 1.419922 GGAACACGCATGTACGCTG 59.580 57.895 0.00 0.00 38.45 5.18
426 427 1.419922 GAACACGCATGTACGCTGG 59.580 57.895 0.00 0.00 38.45 4.85
427 428 1.966493 GAACACGCATGTACGCTGGG 61.966 60.000 9.78 9.78 38.45 4.45
428 429 2.434185 CACGCATGTACGCTGGGT 60.434 61.111 10.85 10.85 40.03 4.51
429 430 1.153726 CACGCATGTACGCTGGGTA 60.154 57.895 14.77 0.00 37.65 3.69
430 431 0.529773 CACGCATGTACGCTGGGTAT 60.530 55.000 14.77 0.00 37.65 2.73
431 432 0.249322 ACGCATGTACGCTGGGTATC 60.249 55.000 13.92 3.30 37.93 2.24
432 433 0.249280 CGCATGTACGCTGGGTATCA 60.249 55.000 7.87 8.34 32.74 2.15
433 434 1.804746 CGCATGTACGCTGGGTATCAA 60.805 52.381 7.87 0.00 32.74 2.57
434 435 2.494059 GCATGTACGCTGGGTATCAAT 58.506 47.619 7.87 0.78 32.74 2.57
435 436 3.659786 GCATGTACGCTGGGTATCAATA 58.340 45.455 7.87 0.00 32.74 1.90
436 437 4.062293 GCATGTACGCTGGGTATCAATAA 58.938 43.478 7.87 0.00 32.74 1.40
437 438 4.695455 GCATGTACGCTGGGTATCAATAAT 59.305 41.667 7.87 0.00 32.74 1.28
438 439 5.181245 GCATGTACGCTGGGTATCAATAATT 59.819 40.000 7.87 0.00 32.74 1.40
439 440 6.293955 GCATGTACGCTGGGTATCAATAATTT 60.294 38.462 7.87 0.00 32.74 1.82
440 441 7.648142 CATGTACGCTGGGTATCAATAATTTT 58.352 34.615 7.87 0.00 32.74 1.82
441 442 7.254227 TGTACGCTGGGTATCAATAATTTTC 57.746 36.000 7.87 0.00 32.74 2.29
442 443 5.767816 ACGCTGGGTATCAATAATTTTCC 57.232 39.130 0.00 0.00 0.00 3.13
443 444 5.197451 ACGCTGGGTATCAATAATTTTCCA 58.803 37.500 0.00 0.00 0.00 3.53
444 445 5.067283 ACGCTGGGTATCAATAATTTTCCAC 59.933 40.000 0.00 0.00 0.00 4.02
445 446 5.067153 CGCTGGGTATCAATAATTTTCCACA 59.933 40.000 0.00 0.00 0.00 4.17
446 447 6.239008 CGCTGGGTATCAATAATTTTCCACAT 60.239 38.462 0.00 0.00 0.00 3.21
447 448 7.500141 GCTGGGTATCAATAATTTTCCACATT 58.500 34.615 0.00 0.00 0.00 2.71
448 449 7.653311 GCTGGGTATCAATAATTTTCCACATTC 59.347 37.037 0.00 0.00 0.00 2.67
449 450 8.837099 TGGGTATCAATAATTTTCCACATTCT 57.163 30.769 0.00 0.00 0.00 2.40
450 451 8.694540 TGGGTATCAATAATTTTCCACATTCTG 58.305 33.333 0.00 0.00 0.00 3.02
451 452 8.695456 GGGTATCAATAATTTTCCACATTCTGT 58.305 33.333 0.00 0.00 0.00 3.41
468 469 8.154649 ACATTCTGTGAATATTCCGTAAATCC 57.845 34.615 12.90 0.00 0.00 3.01
469 470 6.838198 TTCTGTGAATATTCCGTAAATCCG 57.162 37.500 12.90 0.00 0.00 4.18
470 471 6.151663 TCTGTGAATATTCCGTAAATCCGA 57.848 37.500 12.90 0.00 0.00 4.55
471 472 6.575267 TCTGTGAATATTCCGTAAATCCGAA 58.425 36.000 12.90 0.00 0.00 4.30
472 473 6.477688 TCTGTGAATATTCCGTAAATCCGAAC 59.522 38.462 12.90 0.78 0.00 3.95
473 474 6.107343 TGTGAATATTCCGTAAATCCGAACA 58.893 36.000 12.90 3.29 0.00 3.18
474 475 6.764085 TGTGAATATTCCGTAAATCCGAACAT 59.236 34.615 12.90 0.00 0.00 2.71
475 476 7.069569 GTGAATATTCCGTAAATCCGAACATG 58.930 38.462 12.90 0.00 0.00 3.21
476 477 3.963383 ATTCCGTAAATCCGAACATGC 57.037 42.857 0.00 0.00 0.00 4.06
477 478 2.388310 TCCGTAAATCCGAACATGCA 57.612 45.000 0.00 0.00 0.00 3.96
478 479 2.912771 TCCGTAAATCCGAACATGCAT 58.087 42.857 0.00 0.00 0.00 3.96
479 480 2.611751 TCCGTAAATCCGAACATGCATG 59.388 45.455 25.09 25.09 0.00 4.06
480 481 2.354510 CCGTAAATCCGAACATGCATGT 59.645 45.455 26.61 26.61 44.20 3.21
481 482 3.558006 CCGTAAATCCGAACATGCATGTA 59.442 43.478 31.55 17.18 40.80 2.29
482 483 4.213270 CCGTAAATCCGAACATGCATGTAT 59.787 41.667 31.55 20.92 40.80 2.29
483 484 5.407084 CCGTAAATCCGAACATGCATGTATA 59.593 40.000 31.55 17.36 40.80 1.47
484 485 6.073494 CCGTAAATCCGAACATGCATGTATAA 60.073 38.462 31.55 17.68 40.80 0.98
485 486 6.790350 CGTAAATCCGAACATGCATGTATAAC 59.210 38.462 31.55 20.42 40.80 1.89
486 487 6.942532 AAATCCGAACATGCATGTATAACT 57.057 33.333 31.55 16.54 40.80 2.24
487 488 6.942532 AATCCGAACATGCATGTATAACTT 57.057 33.333 31.55 18.93 40.80 2.66
488 489 5.984233 TCCGAACATGCATGTATAACTTC 57.016 39.130 31.55 21.91 40.80 3.01
489 490 5.670485 TCCGAACATGCATGTATAACTTCT 58.330 37.500 31.55 14.23 40.80 2.85
490 491 6.112734 TCCGAACATGCATGTATAACTTCTT 58.887 36.000 31.55 13.47 40.80 2.52
491 492 6.597672 TCCGAACATGCATGTATAACTTCTTT 59.402 34.615 31.55 12.71 40.80 2.52
492 493 7.120579 TCCGAACATGCATGTATAACTTCTTTT 59.879 33.333 31.55 12.17 40.80 2.27
493 494 8.394877 CCGAACATGCATGTATAACTTCTTTTA 58.605 33.333 31.55 0.00 40.80 1.52
494 495 9.425893 CGAACATGCATGTATAACTTCTTTTAG 57.574 33.333 31.55 8.86 40.80 1.85
495 496 9.722056 GAACATGCATGTATAACTTCTTTTAGG 57.278 33.333 31.55 0.00 40.80 2.69
496 497 8.225603 ACATGCATGTATAACTTCTTTTAGGG 57.774 34.615 30.50 0.00 39.68 3.53
497 498 7.285401 ACATGCATGTATAACTTCTTTTAGGGG 59.715 37.037 30.50 0.00 39.68 4.79
498 499 6.126409 TGCATGTATAACTTCTTTTAGGGGG 58.874 40.000 0.00 0.00 0.00 5.40
499 500 6.069323 TGCATGTATAACTTCTTTTAGGGGGA 60.069 38.462 0.00 0.00 0.00 4.81
500 501 6.262496 GCATGTATAACTTCTTTTAGGGGGAC 59.738 42.308 0.00 0.00 0.00 4.46
610 611 1.300971 CCGAGTACCGACGTGGAGAA 61.301 60.000 10.46 0.00 42.00 2.87
646 647 0.037882 CTTGGAGAGAGAAGCACGCA 60.038 55.000 0.00 0.00 0.00 5.24
677 678 5.620259 ATGATTAATCCCCCATCATTCCA 57.380 39.130 12.90 0.00 34.59 3.53
682 683 0.546122 TCCCCCATCATTCCAACGAG 59.454 55.000 0.00 0.00 0.00 4.18
684 685 0.394216 CCCCATCATTCCAACGAGCA 60.394 55.000 0.00 0.00 0.00 4.26
686 687 2.026641 CCCATCATTCCAACGAGCAAT 58.973 47.619 0.00 0.00 0.00 3.56
709 713 1.673920 GGTCGCAAAGTTCCAAACTCA 59.326 47.619 0.00 0.00 41.91 3.41
713 717 2.285756 CGCAAAGTTCCAAACTCACGTA 59.714 45.455 0.00 0.00 41.91 3.57
727 731 2.273370 CACGTATAGTGCAAGGACGT 57.727 50.000 10.48 10.48 46.86 4.34
728 732 2.273370 ACGTATAGTGCAAGGACGTG 57.727 50.000 14.26 0.00 44.43 4.49
729 733 0.921347 CGTATAGTGCAAGGACGTGC 59.079 55.000 0.00 0.00 45.15 5.34
730 734 1.287425 GTATAGTGCAAGGACGTGCC 58.713 55.000 2.38 0.00 44.26 5.01
731 735 0.179121 TATAGTGCAAGGACGTGCCG 60.179 55.000 2.38 0.00 44.26 5.69
732 736 1.884075 ATAGTGCAAGGACGTGCCGA 61.884 55.000 2.38 0.00 44.26 5.54
733 737 2.758770 TAGTGCAAGGACGTGCCGAC 62.759 60.000 2.38 0.85 44.26 4.79
867 872 2.162338 TAGTCCAACCTTGACGCCCG 62.162 60.000 0.00 0.00 0.00 6.13
921 929 0.321298 ATAAACCGCTTGCGACCACT 60.321 50.000 16.99 0.00 0.00 4.00
928 936 1.732917 CTTGCGACCACTTTGCCAA 59.267 52.632 0.00 0.00 32.85 4.52
938 946 3.149196 CCACTTTGCCAAGTACACTCAT 58.851 45.455 2.38 0.00 41.69 2.90
973 983 1.079127 TTGCTAGAGCGGGACAAGC 60.079 57.895 0.00 0.00 45.83 4.01
1037 1054 2.990479 GATGCTCCCGTTCCTGGT 59.010 61.111 0.00 0.00 0.00 4.00
1410 1436 1.300620 CTTCTTCGCCCACGTCACA 60.301 57.895 0.00 0.00 41.18 3.58
1945 1990 2.569354 GCGGGCCTGATCGAGATCT 61.569 63.158 18.31 0.00 38.60 2.75
1953 2006 2.613223 CCTGATCGAGATCTGCATGCAT 60.613 50.000 22.97 7.28 38.60 3.96
2070 2129 1.009829 CGTACCAAGATCCTTGCAGC 58.990 55.000 1.39 0.00 0.00 5.25
2111 2170 7.041098 GCTCTACTCTTTTTCCTCATCAACAAA 60.041 37.037 0.00 0.00 0.00 2.83
2119 2178 8.839310 TTTTTCCTCATCAACAAACAAAAAGA 57.161 26.923 0.00 0.00 0.00 2.52
2216 2281 8.252964 ACGGAGTTAATATTTTTGAGACAGTC 57.747 34.615 0.00 0.00 37.78 3.51
2266 2331 1.270839 CGAGGTTTGACATGGTCCACT 60.271 52.381 0.00 0.00 0.00 4.00
2368 2433 4.944317 TGACCCGAATAACATAACAATGCA 59.056 37.500 0.00 0.00 0.00 3.96
2369 2434 5.592282 TGACCCGAATAACATAACAATGCAT 59.408 36.000 0.00 0.00 0.00 3.96
2401 2466 8.565416 CCTATTTTCTTTTCAATATCGGGGTAC 58.435 37.037 0.00 0.00 0.00 3.34
2500 2567 4.094442 CCGTTGTGTCTAAATTTAGAGCCC 59.906 45.833 24.92 15.38 40.23 5.19
2567 2634 3.007831 GCAGCCTGAGCCTAATCTAATCT 59.992 47.826 0.00 0.00 41.25 2.40
2578 2645 7.662897 AGCCTAATCTAATCTTCCGACTTTAG 58.337 38.462 0.00 0.00 0.00 1.85
2586 2653 6.738832 AATCTTCCGACTTTAGGTTTAAGC 57.261 37.500 0.00 0.00 0.00 3.09
2592 2936 2.753452 GACTTTAGGTTTAAGCCTGCCC 59.247 50.000 20.23 2.44 39.60 5.36
2607 2951 2.487265 CCTGCCCGTGCCTAGATTTATT 60.487 50.000 0.00 0.00 36.33 1.40
2630 2974 2.308690 GGTGAGACGCTACCTAATCCT 58.691 52.381 0.00 0.00 34.11 3.24
2720 3071 0.248784 GATTTCAAGCGAGGGCATGC 60.249 55.000 9.90 9.90 43.41 4.06
2724 3075 2.282391 AAGCGAGGGCATGCACAA 60.282 55.556 24.51 0.00 43.41 3.33
2808 3159 6.867519 TGTCTACAATGGGTCATCTCTTAA 57.132 37.500 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.423964 TCACACTACCCAATATAATGTGTAGTA 57.576 33.333 13.60 0.00 40.86 1.82
3 4 8.313944 TCACACTACCCAATATAATGTGTAGT 57.686 34.615 9.51 9.51 42.68 2.73
4 5 9.208022 CATCACACTACCCAATATAATGTGTAG 57.792 37.037 8.41 8.41 37.32 2.74
5 6 7.659799 GCATCACACTACCCAATATAATGTGTA 59.340 37.037 0.00 0.00 37.73 2.90
6 7 6.486657 GCATCACACTACCCAATATAATGTGT 59.513 38.462 0.00 0.00 37.73 3.72
7 8 6.486320 TGCATCACACTACCCAATATAATGTG 59.514 38.462 0.00 0.00 37.82 3.21
8 9 6.486657 GTGCATCACACTACCCAATATAATGT 59.513 38.462 0.00 0.00 46.41 2.71
9 10 6.902341 GTGCATCACACTACCCAATATAATG 58.098 40.000 0.00 0.00 46.41 1.90
24 25 3.472652 AGAACTTTTACGGTGCATCACA 58.527 40.909 0.00 0.00 35.86 3.58
25 26 3.423123 CGAGAACTTTTACGGTGCATCAC 60.423 47.826 0.00 0.00 0.00 3.06
26 27 2.734606 CGAGAACTTTTACGGTGCATCA 59.265 45.455 0.00 0.00 0.00 3.07
27 28 2.991190 TCGAGAACTTTTACGGTGCATC 59.009 45.455 0.00 0.00 0.00 3.91
28 29 2.993899 CTCGAGAACTTTTACGGTGCAT 59.006 45.455 6.58 0.00 0.00 3.96
29 30 2.400399 CTCGAGAACTTTTACGGTGCA 58.600 47.619 6.58 0.00 0.00 4.57
30 31 1.725164 CCTCGAGAACTTTTACGGTGC 59.275 52.381 15.71 0.00 0.00 5.01
31 32 3.243336 CTCCTCGAGAACTTTTACGGTG 58.757 50.000 15.71 0.00 0.00 4.94
32 33 2.889678 ACTCCTCGAGAACTTTTACGGT 59.110 45.455 15.71 0.00 33.32 4.83
33 34 3.572604 ACTCCTCGAGAACTTTTACGG 57.427 47.619 15.71 0.00 33.32 4.02
34 35 5.221130 AGAAACTCCTCGAGAACTTTTACG 58.779 41.667 15.71 0.00 33.32 3.18
35 36 6.144241 GTGAGAAACTCCTCGAGAACTTTTAC 59.856 42.308 15.71 6.33 35.99 2.01
36 37 6.214399 GTGAGAAACTCCTCGAGAACTTTTA 58.786 40.000 15.71 0.00 35.99 1.52
37 38 5.051153 GTGAGAAACTCCTCGAGAACTTTT 58.949 41.667 15.71 7.45 35.99 2.27
38 39 4.501743 GGTGAGAAACTCCTCGAGAACTTT 60.502 45.833 15.71 7.41 35.99 2.66
39 40 3.006003 GGTGAGAAACTCCTCGAGAACTT 59.994 47.826 15.71 1.16 35.99 2.66
40 41 2.559231 GGTGAGAAACTCCTCGAGAACT 59.441 50.000 15.71 3.51 35.99 3.01
41 42 2.668834 CGGTGAGAAACTCCTCGAGAAC 60.669 54.545 15.71 0.00 35.99 3.01
42 43 1.540267 CGGTGAGAAACTCCTCGAGAA 59.460 52.381 15.71 0.00 35.99 2.87
43 44 1.166129 CGGTGAGAAACTCCTCGAGA 58.834 55.000 15.71 0.00 35.99 4.04
44 45 1.131504 CTCGGTGAGAAACTCCTCGAG 59.868 57.143 5.13 5.13 41.43 4.04
45 46 1.166129 CTCGGTGAGAAACTCCTCGA 58.834 55.000 0.00 0.00 35.99 4.04
46 47 0.456995 GCTCGGTGAGAAACTCCTCG 60.457 60.000 0.00 0.00 35.99 4.63
47 48 0.603569 TGCTCGGTGAGAAACTCCTC 59.396 55.000 0.00 0.00 0.00 3.71
48 49 1.048601 TTGCTCGGTGAGAAACTCCT 58.951 50.000 0.00 0.00 0.00 3.69
49 50 1.149148 GTTGCTCGGTGAGAAACTCC 58.851 55.000 9.89 0.00 43.04 3.85
50 51 1.149148 GGTTGCTCGGTGAGAAACTC 58.851 55.000 15.40 4.59 45.05 3.01
51 52 0.600255 CGGTTGCTCGGTGAGAAACT 60.600 55.000 15.40 0.00 45.05 2.66
52 53 1.566018 CCGGTTGCTCGGTGAGAAAC 61.566 60.000 8.84 8.84 44.99 2.78
53 54 1.301401 CCGGTTGCTCGGTGAGAAA 60.301 57.895 0.00 0.00 44.60 2.52
54 55 2.342279 CCGGTTGCTCGGTGAGAA 59.658 61.111 0.00 0.00 44.60 2.87
61 62 0.878523 TCACAAGAACCGGTTGCTCG 60.879 55.000 27.87 13.40 0.00 5.03
62 63 1.523758 ATCACAAGAACCGGTTGCTC 58.476 50.000 27.87 11.15 0.00 4.26
63 64 1.981256 AATCACAAGAACCGGTTGCT 58.019 45.000 27.87 18.25 0.00 3.91
64 65 4.165779 CAATAATCACAAGAACCGGTTGC 58.834 43.478 27.87 16.18 0.00 4.17
65 66 4.165779 GCAATAATCACAAGAACCGGTTG 58.834 43.478 27.87 14.58 0.00 3.77
66 67 3.192633 GGCAATAATCACAAGAACCGGTT 59.807 43.478 22.50 22.50 0.00 4.44
67 68 2.752903 GGCAATAATCACAAGAACCGGT 59.247 45.455 0.00 0.00 0.00 5.28
68 69 2.223249 CGGCAATAATCACAAGAACCGG 60.223 50.000 0.00 0.00 34.63 5.28
69 70 2.223249 CCGGCAATAATCACAAGAACCG 60.223 50.000 0.00 0.00 37.88 4.44
70 71 3.013921 TCCGGCAATAATCACAAGAACC 58.986 45.455 0.00 0.00 0.00 3.62
71 72 4.695217 TTCCGGCAATAATCACAAGAAC 57.305 40.909 0.00 0.00 0.00 3.01
72 73 4.764823 ACTTTCCGGCAATAATCACAAGAA 59.235 37.500 0.00 0.00 0.00 2.52
73 74 4.331968 ACTTTCCGGCAATAATCACAAGA 58.668 39.130 0.00 0.00 0.00 3.02
74 75 4.701956 ACTTTCCGGCAATAATCACAAG 57.298 40.909 0.00 0.00 0.00 3.16
75 76 5.221342 ACAAACTTTCCGGCAATAATCACAA 60.221 36.000 0.00 0.00 0.00 3.33
76 77 4.279671 ACAAACTTTCCGGCAATAATCACA 59.720 37.500 0.00 0.00 0.00 3.58
77 78 4.621034 CACAAACTTTCCGGCAATAATCAC 59.379 41.667 0.00 0.00 0.00 3.06
78 79 4.520874 TCACAAACTTTCCGGCAATAATCA 59.479 37.500 0.00 0.00 0.00 2.57
79 80 5.054390 TCACAAACTTTCCGGCAATAATC 57.946 39.130 0.00 0.00 0.00 1.75
80 81 5.461032 TTCACAAACTTTCCGGCAATAAT 57.539 34.783 0.00 0.00 0.00 1.28
81 82 4.920640 TTCACAAACTTTCCGGCAATAA 57.079 36.364 0.00 0.00 0.00 1.40
82 83 4.279671 ACATTCACAAACTTTCCGGCAATA 59.720 37.500 0.00 0.00 0.00 1.90
83 84 3.069443 ACATTCACAAACTTTCCGGCAAT 59.931 39.130 0.00 0.00 0.00 3.56
84 85 2.428890 ACATTCACAAACTTTCCGGCAA 59.571 40.909 0.00 0.00 0.00 4.52
85 86 2.028130 ACATTCACAAACTTTCCGGCA 58.972 42.857 0.00 0.00 0.00 5.69
86 87 2.793278 ACATTCACAAACTTTCCGGC 57.207 45.000 0.00 0.00 0.00 6.13
87 88 3.801594 CCAAACATTCACAAACTTTCCGG 59.198 43.478 0.00 0.00 0.00 5.14
88 89 4.677584 TCCAAACATTCACAAACTTTCCG 58.322 39.130 0.00 0.00 0.00 4.30
89 90 5.049828 CCTCCAAACATTCACAAACTTTCC 58.950 41.667 0.00 0.00 0.00 3.13
90 91 4.507756 GCCTCCAAACATTCACAAACTTTC 59.492 41.667 0.00 0.00 0.00 2.62
91 92 4.441792 GCCTCCAAACATTCACAAACTTT 58.558 39.130 0.00 0.00 0.00 2.66
92 93 3.181466 GGCCTCCAAACATTCACAAACTT 60.181 43.478 0.00 0.00 0.00 2.66
93 94 2.365293 GGCCTCCAAACATTCACAAACT 59.635 45.455 0.00 0.00 0.00 2.66
94 95 2.102252 TGGCCTCCAAACATTCACAAAC 59.898 45.455 3.32 0.00 0.00 2.93
95 96 2.102252 GTGGCCTCCAAACATTCACAAA 59.898 45.455 3.32 0.00 34.18 2.83
96 97 1.686052 GTGGCCTCCAAACATTCACAA 59.314 47.619 3.32 0.00 34.18 3.33
97 98 1.327303 GTGGCCTCCAAACATTCACA 58.673 50.000 3.32 0.00 34.18 3.58
98 99 0.603065 GGTGGCCTCCAAACATTCAC 59.397 55.000 19.19 0.00 34.18 3.18
99 100 0.482446 AGGTGGCCTCCAAACATTCA 59.518 50.000 25.36 0.00 34.18 2.57
100 101 1.177401 GAGGTGGCCTCCAAACATTC 58.823 55.000 25.36 9.48 44.36 2.67
101 102 3.363787 GAGGTGGCCTCCAAACATT 57.636 52.632 25.36 3.53 44.36 2.71
112 113 2.436115 GGTAGGCGTTGAGGTGGC 60.436 66.667 0.00 0.00 0.00 5.01
113 114 1.079127 CTGGTAGGCGTTGAGGTGG 60.079 63.158 0.00 0.00 0.00 4.61
114 115 0.892755 TACTGGTAGGCGTTGAGGTG 59.107 55.000 0.00 0.00 0.00 4.00
115 116 1.183549 CTACTGGTAGGCGTTGAGGT 58.816 55.000 0.18 0.00 0.00 3.85
116 117 1.135083 CACTACTGGTAGGCGTTGAGG 60.135 57.143 11.73 0.00 37.49 3.86
117 118 1.135083 CCACTACTGGTAGGCGTTGAG 60.135 57.143 11.73 0.00 37.49 3.02
118 119 0.892755 CCACTACTGGTAGGCGTTGA 59.107 55.000 11.73 0.00 37.49 3.18
119 120 3.436001 CCACTACTGGTAGGCGTTG 57.564 57.895 11.73 2.03 37.49 4.10
126 127 8.178610 AAATGCAATTCTCAACCACTACTGGTA 61.179 37.037 0.00 0.00 43.25 3.25
127 128 7.421263 AAATGCAATTCTCAACCACTACTGGT 61.421 38.462 0.00 0.00 45.19 4.00
128 129 3.411446 TGCAATTCTCAACCACTACTGG 58.589 45.455 0.00 0.00 44.26 4.00
129 130 5.633830 AATGCAATTCTCAACCACTACTG 57.366 39.130 0.00 0.00 0.00 2.74
130 131 7.944729 ATAAATGCAATTCTCAACCACTACT 57.055 32.000 0.00 0.00 33.67 2.57
131 132 8.028938 ACAATAAATGCAATTCTCAACCACTAC 58.971 33.333 0.00 0.00 33.67 2.73
132 133 8.028354 CACAATAAATGCAATTCTCAACCACTA 58.972 33.333 0.00 0.00 33.67 2.74
133 134 6.869913 CACAATAAATGCAATTCTCAACCACT 59.130 34.615 0.00 0.00 33.67 4.00
134 135 6.867816 TCACAATAAATGCAATTCTCAACCAC 59.132 34.615 0.00 0.00 33.67 4.16
135 136 6.990798 TCACAATAAATGCAATTCTCAACCA 58.009 32.000 0.00 0.00 33.67 3.67
136 137 9.754382 ATATCACAATAAATGCAATTCTCAACC 57.246 29.630 0.00 0.00 33.67 3.77
140 141 9.539139 CGAGATATCACAATAAATGCAATTCTC 57.461 33.333 5.32 0.00 33.67 2.87
141 142 8.509690 CCGAGATATCACAATAAATGCAATTCT 58.490 33.333 5.32 0.00 33.67 2.40
142 143 7.752239 CCCGAGATATCACAATAAATGCAATTC 59.248 37.037 5.32 0.00 33.67 2.17
143 144 7.448161 TCCCGAGATATCACAATAAATGCAATT 59.552 33.333 5.32 0.00 38.98 2.32
144 145 6.942005 TCCCGAGATATCACAATAAATGCAAT 59.058 34.615 5.32 0.00 0.00 3.56
145 146 6.295249 TCCCGAGATATCACAATAAATGCAA 58.705 36.000 5.32 0.00 0.00 4.08
146 147 5.863965 TCCCGAGATATCACAATAAATGCA 58.136 37.500 5.32 0.00 0.00 3.96
147 148 6.650807 TCTTCCCGAGATATCACAATAAATGC 59.349 38.462 5.32 0.00 0.00 3.56
148 149 8.607441 TTCTTCCCGAGATATCACAATAAATG 57.393 34.615 5.32 0.00 33.49 2.32
150 151 9.929180 CTATTCTTCCCGAGATATCACAATAAA 57.071 33.333 5.32 0.00 33.49 1.40
151 152 9.309224 TCTATTCTTCCCGAGATATCACAATAA 57.691 33.333 5.32 0.00 33.49 1.40
152 153 8.879427 TCTATTCTTCCCGAGATATCACAATA 57.121 34.615 5.32 0.00 33.49 1.90
153 154 7.453126 ACTCTATTCTTCCCGAGATATCACAAT 59.547 37.037 5.32 0.00 33.49 2.71
154 155 6.778069 ACTCTATTCTTCCCGAGATATCACAA 59.222 38.462 5.32 0.00 33.49 3.33
155 156 6.207614 CACTCTATTCTTCCCGAGATATCACA 59.792 42.308 5.32 0.00 33.49 3.58
156 157 6.431543 TCACTCTATTCTTCCCGAGATATCAC 59.568 42.308 5.32 0.00 33.49 3.06
157 158 6.543735 TCACTCTATTCTTCCCGAGATATCA 58.456 40.000 5.32 0.00 33.49 2.15
158 159 6.657541 ACTCACTCTATTCTTCCCGAGATATC 59.342 42.308 0.00 0.00 33.49 1.63
159 160 6.548321 ACTCACTCTATTCTTCCCGAGATAT 58.452 40.000 0.00 0.00 33.49 1.63
160 161 5.942961 ACTCACTCTATTCTTCCCGAGATA 58.057 41.667 0.00 0.00 33.49 1.98
161 162 4.798882 ACTCACTCTATTCTTCCCGAGAT 58.201 43.478 0.00 0.00 33.49 2.75
162 163 4.237976 ACTCACTCTATTCTTCCCGAGA 57.762 45.455 0.00 0.00 0.00 4.04
163 164 4.993029 AACTCACTCTATTCTTCCCGAG 57.007 45.455 0.00 0.00 0.00 4.63
164 165 4.159879 GGAAACTCACTCTATTCTTCCCGA 59.840 45.833 0.00 0.00 0.00 5.14
165 166 4.434520 GGAAACTCACTCTATTCTTCCCG 58.565 47.826 0.00 0.00 0.00 5.14
166 167 4.081586 ACGGAAACTCACTCTATTCTTCCC 60.082 45.833 0.00 0.00 0.00 3.97
167 168 4.865365 CACGGAAACTCACTCTATTCTTCC 59.135 45.833 0.00 0.00 0.00 3.46
168 169 4.865365 CCACGGAAACTCACTCTATTCTTC 59.135 45.833 0.00 0.00 0.00 2.87
169 170 4.283722 ACCACGGAAACTCACTCTATTCTT 59.716 41.667 0.00 0.00 0.00 2.52
170 171 3.833070 ACCACGGAAACTCACTCTATTCT 59.167 43.478 0.00 0.00 0.00 2.40
171 172 3.927142 CACCACGGAAACTCACTCTATTC 59.073 47.826 0.00 0.00 0.00 1.75
172 173 3.323979 ACACCACGGAAACTCACTCTATT 59.676 43.478 0.00 0.00 0.00 1.73
173 174 2.897969 ACACCACGGAAACTCACTCTAT 59.102 45.455 0.00 0.00 0.00 1.98
174 175 2.313317 ACACCACGGAAACTCACTCTA 58.687 47.619 0.00 0.00 0.00 2.43
175 176 1.120530 ACACCACGGAAACTCACTCT 58.879 50.000 0.00 0.00 0.00 3.24
176 177 1.597663 CAACACCACGGAAACTCACTC 59.402 52.381 0.00 0.00 0.00 3.51
177 178 1.208535 TCAACACCACGGAAACTCACT 59.791 47.619 0.00 0.00 0.00 3.41
178 179 1.658994 TCAACACCACGGAAACTCAC 58.341 50.000 0.00 0.00 0.00 3.51
179 180 2.011222 GTTCAACACCACGGAAACTCA 58.989 47.619 0.00 0.00 0.00 3.41
180 181 1.332686 GGTTCAACACCACGGAAACTC 59.667 52.381 0.00 0.00 46.42 3.01
181 182 1.385528 GGTTCAACACCACGGAAACT 58.614 50.000 0.00 0.00 46.42 2.66
182 183 3.930400 GGTTCAACACCACGGAAAC 57.070 52.632 0.00 0.00 46.42 2.78
191 192 0.941542 TACGCTTGCAGGTTCAACAC 59.058 50.000 0.00 0.00 0.00 3.32
192 193 1.890876 ATACGCTTGCAGGTTCAACA 58.109 45.000 0.00 0.00 0.00 3.33
193 194 2.351726 CCTATACGCTTGCAGGTTCAAC 59.648 50.000 0.00 0.00 0.00 3.18
194 195 2.627945 CCTATACGCTTGCAGGTTCAA 58.372 47.619 0.00 0.00 0.00 2.69
195 196 1.134521 CCCTATACGCTTGCAGGTTCA 60.135 52.381 0.00 0.00 0.00 3.18
196 197 1.583054 CCCTATACGCTTGCAGGTTC 58.417 55.000 0.00 0.00 0.00 3.62
197 198 0.463833 GCCCTATACGCTTGCAGGTT 60.464 55.000 0.00 0.00 0.00 3.50
198 199 1.146263 GCCCTATACGCTTGCAGGT 59.854 57.895 0.00 0.00 0.00 4.00
199 200 0.679505 TAGCCCTATACGCTTGCAGG 59.320 55.000 0.00 0.00 37.79 4.85
200 201 2.341257 CATAGCCCTATACGCTTGCAG 58.659 52.381 0.00 0.00 37.79 4.41
201 202 1.001974 CCATAGCCCTATACGCTTGCA 59.998 52.381 0.00 0.00 37.79 4.08
202 203 1.726853 CCATAGCCCTATACGCTTGC 58.273 55.000 0.00 0.00 37.79 4.01
203 204 1.001974 TGCCATAGCCCTATACGCTTG 59.998 52.381 0.00 0.00 37.79 4.01
204 205 1.348064 TGCCATAGCCCTATACGCTT 58.652 50.000 0.00 0.00 37.79 4.68
205 206 1.348064 TTGCCATAGCCCTATACGCT 58.652 50.000 7.59 0.00 40.45 5.07
206 207 2.403252 ATTGCCATAGCCCTATACGC 57.597 50.000 0.00 0.00 38.69 4.42
207 208 2.930040 CGAATTGCCATAGCCCTATACG 59.070 50.000 0.00 0.00 38.69 3.06
208 209 3.684788 CACGAATTGCCATAGCCCTATAC 59.315 47.826 0.00 0.00 38.69 1.47
209 210 3.307410 CCACGAATTGCCATAGCCCTATA 60.307 47.826 0.00 0.00 38.69 1.31
210 211 2.553028 CCACGAATTGCCATAGCCCTAT 60.553 50.000 0.00 0.00 38.69 2.57
211 212 1.202758 CCACGAATTGCCATAGCCCTA 60.203 52.381 0.00 0.00 38.69 3.53
212 213 0.466189 CCACGAATTGCCATAGCCCT 60.466 55.000 0.00 0.00 38.69 5.19
213 214 0.751643 ACCACGAATTGCCATAGCCC 60.752 55.000 0.00 0.00 38.69 5.19
214 215 1.961793 TACCACGAATTGCCATAGCC 58.038 50.000 0.00 0.00 38.69 3.93
215 216 2.943033 ACTTACCACGAATTGCCATAGC 59.057 45.455 0.00 0.00 40.48 2.97
216 217 5.597806 TCTACTTACCACGAATTGCCATAG 58.402 41.667 0.00 0.00 0.00 2.23
217 218 5.128171 ACTCTACTTACCACGAATTGCCATA 59.872 40.000 0.00 0.00 0.00 2.74
218 219 4.081087 ACTCTACTTACCACGAATTGCCAT 60.081 41.667 0.00 0.00 0.00 4.40
219 220 3.259876 ACTCTACTTACCACGAATTGCCA 59.740 43.478 0.00 0.00 0.00 4.92
220 221 3.858247 ACTCTACTTACCACGAATTGCC 58.142 45.455 0.00 0.00 0.00 4.52
221 222 5.178809 ACAAACTCTACTTACCACGAATTGC 59.821 40.000 0.00 0.00 0.00 3.56
222 223 6.780706 ACAAACTCTACTTACCACGAATTG 57.219 37.500 0.00 0.00 0.00 2.32
223 224 6.987992 TCAACAAACTCTACTTACCACGAATT 59.012 34.615 0.00 0.00 0.00 2.17
224 225 6.518493 TCAACAAACTCTACTTACCACGAAT 58.482 36.000 0.00 0.00 0.00 3.34
225 226 5.904941 TCAACAAACTCTACTTACCACGAA 58.095 37.500 0.00 0.00 0.00 3.85
226 227 5.518848 TCAACAAACTCTACTTACCACGA 57.481 39.130 0.00 0.00 0.00 4.35
227 228 5.347907 GGATCAACAAACTCTACTTACCACG 59.652 44.000 0.00 0.00 0.00 4.94
228 229 5.642491 GGGATCAACAAACTCTACTTACCAC 59.358 44.000 0.00 0.00 0.00 4.16
229 230 5.280317 GGGGATCAACAAACTCTACTTACCA 60.280 44.000 0.00 0.00 0.00 3.25
230 231 5.183969 GGGGATCAACAAACTCTACTTACC 58.816 45.833 0.00 0.00 0.00 2.85
231 232 5.801380 TGGGGATCAACAAACTCTACTTAC 58.199 41.667 0.00 0.00 0.00 2.34
232 233 6.636454 ATGGGGATCAACAAACTCTACTTA 57.364 37.500 0.00 0.00 0.00 2.24
233 234 4.993705 TGGGGATCAACAAACTCTACTT 57.006 40.909 0.00 0.00 0.00 2.24
234 235 5.014123 TCAATGGGGATCAACAAACTCTACT 59.986 40.000 0.00 0.00 0.00 2.57
235 236 5.253330 TCAATGGGGATCAACAAACTCTAC 58.747 41.667 0.00 0.00 0.00 2.59
236 237 5.512942 TCAATGGGGATCAACAAACTCTA 57.487 39.130 0.00 0.00 0.00 2.43
237 238 4.387026 TCAATGGGGATCAACAAACTCT 57.613 40.909 0.00 0.00 0.00 3.24
238 239 4.619160 GCTTCAATGGGGATCAACAAACTC 60.619 45.833 0.00 0.00 0.00 3.01
239 240 3.259123 GCTTCAATGGGGATCAACAAACT 59.741 43.478 0.00 0.00 0.00 2.66
240 241 3.588955 GCTTCAATGGGGATCAACAAAC 58.411 45.455 0.00 0.00 0.00 2.93
241 242 2.566724 GGCTTCAATGGGGATCAACAAA 59.433 45.455 0.00 0.00 0.00 2.83
242 243 2.178580 GGCTTCAATGGGGATCAACAA 58.821 47.619 0.00 0.00 0.00 2.83
243 244 1.619432 GGGCTTCAATGGGGATCAACA 60.619 52.381 0.00 0.00 0.00 3.33
244 245 1.114627 GGGCTTCAATGGGGATCAAC 58.885 55.000 0.00 0.00 0.00 3.18
245 246 0.032217 GGGGCTTCAATGGGGATCAA 60.032 55.000 0.00 0.00 0.00 2.57
246 247 1.620259 GGGGCTTCAATGGGGATCA 59.380 57.895 0.00 0.00 0.00 2.92
247 248 1.152461 GGGGGCTTCAATGGGGATC 60.152 63.158 0.00 0.00 0.00 3.36
248 249 1.940742 TGGGGGCTTCAATGGGGAT 60.941 57.895 0.00 0.00 0.00 3.85
249 250 2.536633 TGGGGGCTTCAATGGGGA 60.537 61.111 0.00 0.00 0.00 4.81
250 251 2.364186 GTGGGGGCTTCAATGGGG 60.364 66.667 0.00 0.00 0.00 4.96
251 252 1.984026 GTGTGGGGGCTTCAATGGG 60.984 63.158 0.00 0.00 0.00 4.00
252 253 1.984026 GGTGTGGGGGCTTCAATGG 60.984 63.158 0.00 0.00 0.00 3.16
253 254 0.831288 TTGGTGTGGGGGCTTCAATG 60.831 55.000 0.00 0.00 0.00 2.82
254 255 0.831711 GTTGGTGTGGGGGCTTCAAT 60.832 55.000 0.00 0.00 0.00 2.57
255 256 1.456705 GTTGGTGTGGGGGCTTCAA 60.457 57.895 0.00 0.00 0.00 2.69
256 257 2.197324 GTTGGTGTGGGGGCTTCA 59.803 61.111 0.00 0.00 0.00 3.02
257 258 2.983592 CGTTGGTGTGGGGGCTTC 60.984 66.667 0.00 0.00 0.00 3.86
263 264 2.476534 GATTGCAGCGTTGGTGTGGG 62.477 60.000 0.16 0.00 33.19 4.61
264 265 1.081242 GATTGCAGCGTTGGTGTGG 60.081 57.895 0.16 0.00 33.19 4.17
265 266 0.110056 GAGATTGCAGCGTTGGTGTG 60.110 55.000 0.16 0.00 33.19 3.82
266 267 0.250467 AGAGATTGCAGCGTTGGTGT 60.250 50.000 0.16 0.00 33.19 4.16
267 268 0.167470 CAGAGATTGCAGCGTTGGTG 59.833 55.000 0.16 0.00 0.00 4.17
268 269 0.035317 TCAGAGATTGCAGCGTTGGT 59.965 50.000 0.16 0.00 0.00 3.67
269 270 0.445436 GTCAGAGATTGCAGCGTTGG 59.555 55.000 0.16 0.00 0.00 3.77
270 271 1.136141 GTGTCAGAGATTGCAGCGTTG 60.136 52.381 0.00 0.00 0.00 4.10
271 272 1.151668 GTGTCAGAGATTGCAGCGTT 58.848 50.000 0.00 0.00 0.00 4.84
272 273 0.671781 GGTGTCAGAGATTGCAGCGT 60.672 55.000 0.00 0.00 0.00 5.07
273 274 1.364626 GGGTGTCAGAGATTGCAGCG 61.365 60.000 0.00 0.00 34.39 5.18
274 275 1.364626 CGGGTGTCAGAGATTGCAGC 61.365 60.000 0.00 0.00 33.50 5.25
275 276 0.742281 CCGGGTGTCAGAGATTGCAG 60.742 60.000 0.00 0.00 0.00 4.41
276 277 1.191489 TCCGGGTGTCAGAGATTGCA 61.191 55.000 0.00 0.00 0.00 4.08
277 278 0.460987 CTCCGGGTGTCAGAGATTGC 60.461 60.000 0.00 0.00 0.00 3.56
278 279 1.134965 GTCTCCGGGTGTCAGAGATTG 60.135 57.143 0.00 0.00 38.81 2.67
279 280 1.187087 GTCTCCGGGTGTCAGAGATT 58.813 55.000 0.00 0.00 38.81 2.40
280 281 0.333312 AGTCTCCGGGTGTCAGAGAT 59.667 55.000 0.00 0.00 38.81 2.75
281 282 0.989602 TAGTCTCCGGGTGTCAGAGA 59.010 55.000 0.00 0.00 34.33 3.10
282 283 1.096416 GTAGTCTCCGGGTGTCAGAG 58.904 60.000 0.00 0.00 0.00 3.35
283 284 0.697079 AGTAGTCTCCGGGTGTCAGA 59.303 55.000 0.00 0.00 0.00 3.27
284 285 1.546961 AAGTAGTCTCCGGGTGTCAG 58.453 55.000 0.00 0.00 0.00 3.51
285 286 2.885135 TAAGTAGTCTCCGGGTGTCA 57.115 50.000 0.00 0.00 0.00 3.58
286 287 4.732672 AAATAAGTAGTCTCCGGGTGTC 57.267 45.455 0.00 0.00 0.00 3.67
287 288 5.494390 AAAAATAAGTAGTCTCCGGGTGT 57.506 39.130 0.00 0.00 0.00 4.16
306 307 1.571457 TCTCCTGTTGACCCCCAAAAA 59.429 47.619 0.00 0.00 36.36 1.94
307 308 1.227249 TCTCCTGTTGACCCCCAAAA 58.773 50.000 0.00 0.00 36.36 2.44
308 309 1.455822 ATCTCCTGTTGACCCCCAAA 58.544 50.000 0.00 0.00 36.36 3.28
309 310 1.455822 AATCTCCTGTTGACCCCCAA 58.544 50.000 0.00 0.00 0.00 4.12
310 311 1.913419 GTAATCTCCTGTTGACCCCCA 59.087 52.381 0.00 0.00 0.00 4.96
311 312 2.197465 AGTAATCTCCTGTTGACCCCC 58.803 52.381 0.00 0.00 0.00 5.40
312 313 5.632034 ATAAGTAATCTCCTGTTGACCCC 57.368 43.478 0.00 0.00 0.00 4.95
313 314 9.274206 GATAAATAAGTAATCTCCTGTTGACCC 57.726 37.037 0.00 0.00 0.00 4.46
314 315 8.979574 CGATAAATAAGTAATCTCCTGTTGACC 58.020 37.037 0.00 0.00 0.00 4.02
315 316 9.530633 ACGATAAATAAGTAATCTCCTGTTGAC 57.469 33.333 0.00 0.00 0.00 3.18
316 317 9.529325 CACGATAAATAAGTAATCTCCTGTTGA 57.471 33.333 0.00 0.00 0.00 3.18
317 318 8.765219 CCACGATAAATAAGTAATCTCCTGTTG 58.235 37.037 0.00 0.00 0.00 3.33
318 319 8.701895 TCCACGATAAATAAGTAATCTCCTGTT 58.298 33.333 0.00 0.00 0.00 3.16
319 320 8.246430 TCCACGATAAATAAGTAATCTCCTGT 57.754 34.615 0.00 0.00 0.00 4.00
320 321 9.712305 ATTCCACGATAAATAAGTAATCTCCTG 57.288 33.333 0.00 0.00 0.00 3.86
321 322 9.712305 CATTCCACGATAAATAAGTAATCTCCT 57.288 33.333 0.00 0.00 0.00 3.69
322 323 8.936864 CCATTCCACGATAAATAAGTAATCTCC 58.063 37.037 0.00 0.00 0.00 3.71
323 324 8.443937 GCCATTCCACGATAAATAAGTAATCTC 58.556 37.037 0.00 0.00 0.00 2.75
324 325 7.390718 GGCCATTCCACGATAAATAAGTAATCT 59.609 37.037 0.00 0.00 34.01 2.40
325 326 7.361799 GGGCCATTCCACGATAAATAAGTAATC 60.362 40.741 4.39 0.00 36.21 1.75
326 327 6.433093 GGGCCATTCCACGATAAATAAGTAAT 59.567 38.462 4.39 0.00 36.21 1.89
327 328 5.766174 GGGCCATTCCACGATAAATAAGTAA 59.234 40.000 4.39 0.00 36.21 2.24
328 329 5.163184 TGGGCCATTCCACGATAAATAAGTA 60.163 40.000 0.00 0.00 36.21 2.24
329 330 4.142038 GGGCCATTCCACGATAAATAAGT 58.858 43.478 4.39 0.00 36.21 2.24
330 331 4.141287 TGGGCCATTCCACGATAAATAAG 58.859 43.478 0.00 0.00 36.21 1.73
331 332 4.171878 TGGGCCATTCCACGATAAATAA 57.828 40.909 0.00 0.00 36.21 1.40
332 333 3.866703 TGGGCCATTCCACGATAAATA 57.133 42.857 0.00 0.00 36.21 1.40
333 334 2.693074 GTTGGGCCATTCCACGATAAAT 59.307 45.455 7.26 0.00 36.38 1.40
334 335 2.096248 GTTGGGCCATTCCACGATAAA 58.904 47.619 7.26 0.00 36.38 1.40
335 336 1.283613 AGTTGGGCCATTCCACGATAA 59.716 47.619 7.26 0.00 36.38 1.75
336 337 0.916086 AGTTGGGCCATTCCACGATA 59.084 50.000 7.26 0.00 36.38 2.92
337 338 0.039618 AAGTTGGGCCATTCCACGAT 59.960 50.000 7.26 0.00 36.38 3.73
338 339 0.178975 AAAGTTGGGCCATTCCACGA 60.179 50.000 7.26 0.00 36.38 4.35
339 340 0.678950 AAAAGTTGGGCCATTCCACG 59.321 50.000 7.26 0.00 36.38 4.94
340 341 1.001974 GGAAAAGTTGGGCCATTCCAC 59.998 52.381 25.05 13.77 39.45 4.02
341 342 1.347062 GGAAAAGTTGGGCCATTCCA 58.653 50.000 25.05 1.57 39.45 3.53
342 343 1.347062 TGGAAAAGTTGGGCCATTCC 58.653 50.000 23.81 23.81 39.96 3.01
343 344 3.769300 ACTATGGAAAAGTTGGGCCATTC 59.231 43.478 7.26 8.19 41.19 2.67
344 345 3.515104 CACTATGGAAAAGTTGGGCCATT 59.485 43.478 7.26 0.00 41.19 3.16
345 346 3.099141 CACTATGGAAAAGTTGGGCCAT 58.901 45.455 7.26 0.00 43.22 4.40
346 347 2.524306 CACTATGGAAAAGTTGGGCCA 58.476 47.619 0.00 0.00 34.45 5.36
347 348 1.824852 CCACTATGGAAAAGTTGGGCC 59.175 52.381 0.00 0.00 40.96 5.80
348 349 1.824852 CCCACTATGGAAAAGTTGGGC 59.175 52.381 0.00 0.00 40.96 5.36
349 350 2.456577 CCCCACTATGGAAAAGTTGGG 58.543 52.381 0.00 0.00 41.91 4.12
350 351 2.825532 CACCCCACTATGGAAAAGTTGG 59.174 50.000 0.00 0.00 40.96 3.77
351 352 2.825532 CCACCCCACTATGGAAAAGTTG 59.174 50.000 0.00 0.00 40.96 3.16
352 353 2.821625 GCCACCCCACTATGGAAAAGTT 60.822 50.000 0.00 0.00 40.96 2.66
353 354 1.272480 GCCACCCCACTATGGAAAAGT 60.272 52.381 0.00 0.00 40.96 2.66
354 355 1.474330 GCCACCCCACTATGGAAAAG 58.526 55.000 0.00 0.00 40.96 2.27
355 356 0.040499 GGCCACCCCACTATGGAAAA 59.960 55.000 0.00 0.00 40.96 2.29
356 357 1.143329 TGGCCACCCCACTATGGAAA 61.143 55.000 0.00 0.00 40.96 3.13
357 358 1.542628 TGGCCACCCCACTATGGAA 60.543 57.895 0.00 0.00 40.96 3.53
358 359 2.126142 TGGCCACCCCACTATGGA 59.874 61.111 0.00 0.00 40.96 3.41
366 367 0.251787 AAGACTTTCATGGCCACCCC 60.252 55.000 8.16 0.00 0.00 4.95
367 368 1.177401 GAAGACTTTCATGGCCACCC 58.823 55.000 8.16 0.00 33.38 4.61
368 369 1.177401 GGAAGACTTTCATGGCCACC 58.823 55.000 8.16 0.00 34.90 4.61
369 370 2.206576 AGGAAGACTTTCATGGCCAC 57.793 50.000 8.16 0.00 34.90 5.01
370 371 2.978156 AAGGAAGACTTTCATGGCCA 57.022 45.000 8.56 8.56 35.35 5.36
381 382 5.220970 CCTCGATCAGTCTAGAAAGGAAGAC 60.221 48.000 0.00 0.00 42.02 3.01
382 383 4.884744 CCTCGATCAGTCTAGAAAGGAAGA 59.115 45.833 0.00 0.00 0.00 2.87
383 384 4.037446 CCCTCGATCAGTCTAGAAAGGAAG 59.963 50.000 0.00 0.00 0.00 3.46
384 385 3.954904 CCCTCGATCAGTCTAGAAAGGAA 59.045 47.826 0.00 0.00 0.00 3.36
385 386 3.556999 CCCTCGATCAGTCTAGAAAGGA 58.443 50.000 0.00 0.00 0.00 3.36
386 387 2.625790 CCCCTCGATCAGTCTAGAAAGG 59.374 54.545 0.00 0.00 0.00 3.11
387 388 2.625790 CCCCCTCGATCAGTCTAGAAAG 59.374 54.545 0.00 0.00 0.00 2.62
388 389 2.243994 TCCCCCTCGATCAGTCTAGAAA 59.756 50.000 0.00 0.00 0.00 2.52
389 390 1.850998 TCCCCCTCGATCAGTCTAGAA 59.149 52.381 0.00 0.00 0.00 2.10
390 391 1.519498 TCCCCCTCGATCAGTCTAGA 58.481 55.000 0.00 0.00 0.00 2.43
391 392 1.957877 GTTCCCCCTCGATCAGTCTAG 59.042 57.143 0.00 0.00 0.00 2.43
392 393 1.286849 TGTTCCCCCTCGATCAGTCTA 59.713 52.381 0.00 0.00 0.00 2.59
393 394 0.041238 TGTTCCCCCTCGATCAGTCT 59.959 55.000 0.00 0.00 0.00 3.24
394 395 0.175989 GTGTTCCCCCTCGATCAGTC 59.824 60.000 0.00 0.00 0.00 3.51
395 396 1.605058 CGTGTTCCCCCTCGATCAGT 61.605 60.000 0.00 0.00 0.00 3.41
396 397 1.141881 CGTGTTCCCCCTCGATCAG 59.858 63.158 0.00 0.00 0.00 2.90
397 398 3.014085 GCGTGTTCCCCCTCGATCA 62.014 63.158 0.00 0.00 0.00 2.92
398 399 2.202892 GCGTGTTCCCCCTCGATC 60.203 66.667 0.00 0.00 0.00 3.69
399 400 2.367202 ATGCGTGTTCCCCCTCGAT 61.367 57.895 0.00 0.00 0.00 3.59
400 401 3.000819 ATGCGTGTTCCCCCTCGA 61.001 61.111 0.00 0.00 0.00 4.04
401 402 2.233605 TACATGCGTGTTCCCCCTCG 62.234 60.000 18.34 0.00 39.77 4.63
402 403 0.743345 GTACATGCGTGTTCCCCCTC 60.743 60.000 18.34 0.00 39.77 4.30
403 404 1.298667 GTACATGCGTGTTCCCCCT 59.701 57.895 18.34 0.00 39.77 4.79
404 405 2.104253 CGTACATGCGTGTTCCCCC 61.104 63.158 18.34 0.01 39.77 5.40
405 406 2.746803 GCGTACATGCGTGTTCCCC 61.747 63.158 18.34 1.20 39.77 4.81
406 407 1.740296 AGCGTACATGCGTGTTCCC 60.740 57.895 18.34 4.44 39.77 3.97
407 408 1.419922 CAGCGTACATGCGTGTTCC 59.580 57.895 18.34 7.58 39.77 3.62
408 409 1.419922 CCAGCGTACATGCGTGTTC 59.580 57.895 18.34 11.44 39.77 3.18
409 410 2.032634 CCCAGCGTACATGCGTGTT 61.033 57.895 18.34 1.42 39.77 3.32
410 411 1.879737 TACCCAGCGTACATGCGTGT 61.880 55.000 17.19 17.19 42.39 4.49
411 412 0.529773 ATACCCAGCGTACATGCGTG 60.530 55.000 3.82 3.82 40.67 5.34
412 413 0.249322 GATACCCAGCGTACATGCGT 60.249 55.000 0.00 0.00 40.67 5.24
413 414 0.249280 TGATACCCAGCGTACATGCG 60.249 55.000 0.00 0.00 40.67 4.73
414 415 1.948104 TTGATACCCAGCGTACATGC 58.052 50.000 0.00 0.00 0.00 4.06
415 416 6.801539 AATTATTGATACCCAGCGTACATG 57.198 37.500 0.00 0.00 0.00 3.21
416 417 7.040686 GGAAAATTATTGATACCCAGCGTACAT 60.041 37.037 0.00 0.00 0.00 2.29
417 418 6.261381 GGAAAATTATTGATACCCAGCGTACA 59.739 38.462 0.00 0.00 0.00 2.90
418 419 6.261381 TGGAAAATTATTGATACCCAGCGTAC 59.739 38.462 0.00 0.00 0.00 3.67
419 420 6.261381 GTGGAAAATTATTGATACCCAGCGTA 59.739 38.462 0.00 0.00 0.00 4.42
420 421 5.067283 GTGGAAAATTATTGATACCCAGCGT 59.933 40.000 0.00 0.00 0.00 5.07
421 422 5.067153 TGTGGAAAATTATTGATACCCAGCG 59.933 40.000 0.00 0.00 0.00 5.18
422 423 6.463995 TGTGGAAAATTATTGATACCCAGC 57.536 37.500 0.00 0.00 0.00 4.85
423 424 8.917088 AGAATGTGGAAAATTATTGATACCCAG 58.083 33.333 0.00 0.00 0.00 4.45
424 425 8.694540 CAGAATGTGGAAAATTATTGATACCCA 58.305 33.333 0.00 0.00 0.00 4.51
444 445 7.170828 TCGGATTTACGGAATATTCACAGAATG 59.829 37.037 17.07 0.00 46.00 2.67
445 446 7.214381 TCGGATTTACGGAATATTCACAGAAT 58.786 34.615 17.07 10.81 0.00 2.40
446 447 6.575267 TCGGATTTACGGAATATTCACAGAA 58.425 36.000 17.07 6.86 0.00 3.02
447 448 6.151663 TCGGATTTACGGAATATTCACAGA 57.848 37.500 17.07 0.00 0.00 3.41
448 449 6.256975 TGTTCGGATTTACGGAATATTCACAG 59.743 38.462 17.07 9.90 39.36 3.66
449 450 6.107343 TGTTCGGATTTACGGAATATTCACA 58.893 36.000 17.07 5.44 39.36 3.58
450 451 6.592798 TGTTCGGATTTACGGAATATTCAC 57.407 37.500 17.07 5.93 39.36 3.18
451 452 6.293190 GCATGTTCGGATTTACGGAATATTCA 60.293 38.462 17.07 0.00 37.48 2.57
452 453 6.077838 GCATGTTCGGATTTACGGAATATTC 58.922 40.000 6.93 6.93 37.48 1.75
453 454 5.529430 TGCATGTTCGGATTTACGGAATATT 59.471 36.000 0.00 0.00 37.48 1.28
454 455 5.060506 TGCATGTTCGGATTTACGGAATAT 58.939 37.500 0.00 0.00 39.06 1.28
455 456 4.443621 TGCATGTTCGGATTTACGGAATA 58.556 39.130 0.00 0.00 39.36 1.75
456 457 3.275143 TGCATGTTCGGATTTACGGAAT 58.725 40.909 0.00 0.00 39.36 3.01
457 458 2.701107 TGCATGTTCGGATTTACGGAA 58.299 42.857 0.00 0.00 35.90 4.30
458 459 2.388310 TGCATGTTCGGATTTACGGA 57.612 45.000 0.00 0.00 0.00 4.69
459 460 2.354510 ACATGCATGTTCGGATTTACGG 59.645 45.455 26.61 0.00 37.90 4.02
460 461 3.673746 ACATGCATGTTCGGATTTACG 57.326 42.857 26.61 0.00 37.90 3.18
461 462 7.861630 AGTTATACATGCATGTTCGGATTTAC 58.138 34.615 35.45 21.37 41.97 2.01
462 463 8.445275 AAGTTATACATGCATGTTCGGATTTA 57.555 30.769 35.45 16.72 41.97 1.40
463 464 6.942532 AGTTATACATGCATGTTCGGATTT 57.057 33.333 35.45 12.25 41.97 2.17
464 465 6.767902 AGAAGTTATACATGCATGTTCGGATT 59.232 34.615 35.45 23.68 41.97 3.01
465 466 6.291377 AGAAGTTATACATGCATGTTCGGAT 58.709 36.000 35.45 24.34 41.97 4.18
466 467 5.670485 AGAAGTTATACATGCATGTTCGGA 58.330 37.500 35.45 19.35 41.97 4.55
467 468 5.991328 AGAAGTTATACATGCATGTTCGG 57.009 39.130 35.45 8.62 41.97 4.30
468 469 9.425893 CTAAAAGAAGTTATACATGCATGTTCG 57.574 33.333 35.45 9.03 41.97 3.95
469 470 9.722056 CCTAAAAGAAGTTATACATGCATGTTC 57.278 33.333 35.45 24.69 41.97 3.18
470 471 8.686334 CCCTAAAAGAAGTTATACATGCATGTT 58.314 33.333 35.45 23.98 41.97 2.71
471 472 7.285401 CCCCTAAAAGAAGTTATACATGCATGT 59.715 37.037 33.20 33.20 44.48 3.21
472 473 7.255590 CCCCCTAAAAGAAGTTATACATGCATG 60.256 40.741 25.09 25.09 0.00 4.06
473 474 6.777580 CCCCCTAAAAGAAGTTATACATGCAT 59.222 38.462 0.00 0.00 0.00 3.96
474 475 6.069323 TCCCCCTAAAAGAAGTTATACATGCA 60.069 38.462 0.00 0.00 0.00 3.96
475 476 6.262496 GTCCCCCTAAAAGAAGTTATACATGC 59.738 42.308 0.00 0.00 0.00 4.06
476 477 6.771267 GGTCCCCCTAAAAGAAGTTATACATG 59.229 42.308 0.00 0.00 0.00 3.21
477 478 6.449041 TGGTCCCCCTAAAAGAAGTTATACAT 59.551 38.462 0.00 0.00 0.00 2.29
478 479 5.791664 TGGTCCCCCTAAAAGAAGTTATACA 59.208 40.000 0.00 0.00 0.00 2.29
479 480 6.317663 TGGTCCCCCTAAAAGAAGTTATAC 57.682 41.667 0.00 0.00 0.00 1.47
480 481 6.636336 GCATGGTCCCCCTAAAAGAAGTTATA 60.636 42.308 0.00 0.00 0.00 0.98
481 482 5.766590 CATGGTCCCCCTAAAAGAAGTTAT 58.233 41.667 0.00 0.00 0.00 1.89
482 483 4.569015 GCATGGTCCCCCTAAAAGAAGTTA 60.569 45.833 0.00 0.00 0.00 2.24
483 484 3.817931 GCATGGTCCCCCTAAAAGAAGTT 60.818 47.826 0.00 0.00 0.00 2.66
484 485 2.291605 GCATGGTCCCCCTAAAAGAAGT 60.292 50.000 0.00 0.00 0.00 3.01
485 486 2.291540 TGCATGGTCCCCCTAAAAGAAG 60.292 50.000 0.00 0.00 0.00 2.85
486 487 1.713647 TGCATGGTCCCCCTAAAAGAA 59.286 47.619 0.00 0.00 0.00 2.52
487 488 1.377690 TGCATGGTCCCCCTAAAAGA 58.622 50.000 0.00 0.00 0.00 2.52
488 489 2.034124 CATGCATGGTCCCCCTAAAAG 58.966 52.381 19.40 0.00 0.00 2.27
489 490 1.360852 ACATGCATGGTCCCCCTAAAA 59.639 47.619 29.41 0.00 0.00 1.52
490 491 1.006813 ACATGCATGGTCCCCCTAAA 58.993 50.000 29.41 0.00 0.00 1.85
491 492 1.900254 TACATGCATGGTCCCCCTAA 58.100 50.000 29.41 1.85 0.00 2.69
492 493 2.132303 ATACATGCATGGTCCCCCTA 57.868 50.000 29.41 11.99 0.00 3.53
493 494 2.108250 GTTATACATGCATGGTCCCCCT 59.892 50.000 29.41 10.09 0.00 4.79
494 495 2.108250 AGTTATACATGCATGGTCCCCC 59.892 50.000 29.41 12.91 0.00 5.40
495 496 3.149196 CAGTTATACATGCATGGTCCCC 58.851 50.000 29.41 14.40 0.00 4.81
496 497 4.085357 TCAGTTATACATGCATGGTCCC 57.915 45.455 29.41 13.39 0.00 4.46
497 498 4.389992 CGATCAGTTATACATGCATGGTCC 59.610 45.833 29.41 12.73 0.00 4.46
498 499 5.119279 GTCGATCAGTTATACATGCATGGTC 59.881 44.000 29.41 14.36 0.00 4.02
499 500 4.991056 GTCGATCAGTTATACATGCATGGT 59.009 41.667 29.41 19.62 0.00 3.55
500 501 5.233225 AGTCGATCAGTTATACATGCATGG 58.767 41.667 29.41 12.50 0.00 3.66
585 586 1.021390 ACGTCGGTACTCGGTAGTGG 61.021 60.000 0.00 0.00 39.77 4.00
634 635 1.195115 TAATCCCTGCGTGCTTCTCT 58.805 50.000 0.00 0.00 0.00 3.10
674 675 0.871722 CGACCAAATTGCTCGTTGGA 59.128 50.000 16.55 0.00 46.11 3.53
677 678 0.665835 TTGCGACCAAATTGCTCGTT 59.334 45.000 11.63 0.00 38.71 3.85
682 683 1.792367 GGAACTTTGCGACCAAATTGC 59.208 47.619 0.00 0.00 39.98 3.56
684 685 3.810310 TTGGAACTTTGCGACCAAATT 57.190 38.095 0.00 0.00 39.98 1.82
686 687 2.494073 AGTTTGGAACTTTGCGACCAAA 59.506 40.909 0.00 0.00 45.87 3.28
698 702 3.991773 TGCACTATACGTGAGTTTGGAAC 59.008 43.478 0.00 0.00 46.40 3.62
709 713 1.734707 GCACGTCCTTGCACTATACGT 60.735 52.381 9.22 9.22 46.72 3.57
713 717 4.617875 GGCACGTCCTTGCACTAT 57.382 55.556 0.00 0.00 44.94 2.12
741 745 2.671619 TTTGCTACGTGCCCTGCC 60.672 61.111 0.00 0.00 42.00 4.85
752 756 3.807622 CACGAGAGTTTGGAAGTTTGCTA 59.192 43.478 0.00 0.00 46.40 3.49
758 762 2.288030 CGGTACACGAGAGTTTGGAAGT 60.288 50.000 0.00 0.00 46.40 3.01
867 872 0.572590 CGATCATTGCCGACGACTTC 59.427 55.000 0.00 0.00 0.00 3.01
921 929 3.244078 ACGAGATGAGTGTACTTGGCAAA 60.244 43.478 0.00 0.00 0.00 3.68
928 936 5.162075 GCTTGTTTACGAGATGAGTGTACT 58.838 41.667 1.23 0.00 0.00 2.73
938 946 1.531149 GCAAGCTGCTTGTTTACGAGA 59.469 47.619 34.88 0.00 42.77 4.04
967 977 2.128771 TAAGGATGGCCAAGCTTGTC 57.871 50.000 24.35 12.71 36.29 3.18
973 983 5.221048 CGAAATAAGGTTAAGGATGGCCAAG 60.221 44.000 10.96 0.00 36.29 3.61
981 991 4.879545 GCCATGTCGAAATAAGGTTAAGGA 59.120 41.667 0.00 0.00 0.00 3.36
983 993 4.569162 TCGCCATGTCGAAATAAGGTTAAG 59.431 41.667 0.00 0.00 35.31 1.85
1217 1237 4.180946 CGACGCTCTCCACGGAGG 62.181 72.222 13.13 5.38 42.20 4.30
1293 1319 2.554272 CGGCGCGTGTAAAAGCTT 59.446 55.556 8.43 0.00 0.00 3.74
1363 1389 2.101770 CCTCTTACCGTCGTCGCC 59.898 66.667 0.00 0.00 35.54 5.54
1374 1400 0.483328 AGGCGGCTATCTCCCTCTTA 59.517 55.000 11.03 0.00 0.00 2.10
1410 1436 0.886490 ACTTACGTCCGGTCTCGTGT 60.886 55.000 23.52 15.05 40.50 4.49
1433 1459 3.614616 CGTCTTAGTCAGTTGATTGGAGC 59.385 47.826 0.00 0.00 0.00 4.70
1441 1467 9.746711 CAAGATTAAATTCGTCTTAGTCAGTTG 57.253 33.333 1.17 0.00 31.40 3.16
1487 1524 5.097742 ACACAAGTTATACATAGCCAGCA 57.902 39.130 0.00 0.00 0.00 4.41
1623 1665 1.324383 TGTAGTTCCACGTCAGCTGA 58.676 50.000 13.74 13.74 0.00 4.26
1953 2006 3.260475 ACATAAGCCATGCGTGTTCTA 57.740 42.857 4.96 0.00 38.29 2.10
2070 2129 2.999507 AGAGCTCGTGAACAGTACTG 57.000 50.000 21.44 21.44 0.00 2.74
2189 2254 7.333672 ACTGTCTCAAAAATATTAACTCCGTCC 59.666 37.037 0.00 0.00 0.00 4.79
2239 2304 1.135315 CATGTCAAACCTCGCCAATGG 60.135 52.381 0.00 0.00 0.00 3.16
2313 2378 0.035458 CTCGAGCTTCAGTTTGGGGT 59.965 55.000 0.00 0.00 0.00 4.95
2315 2380 0.603707 TGCTCGAGCTTCAGTTTGGG 60.604 55.000 35.27 0.00 42.66 4.12
2458 2525 1.541015 GGTCAAGCCCAAAAGCCAAAG 60.541 52.381 0.00 0.00 0.00 2.77
2500 2567 5.230942 AGTCGGATGATTAAATTAGGCTCG 58.769 41.667 0.00 0.00 0.00 5.03
2547 2614 4.285775 GGAAGATTAGATTAGGCTCAGGCT 59.714 45.833 5.81 5.81 42.39 4.58
2550 2617 5.242838 AGTCGGAAGATTAGATTAGGCTCAG 59.757 44.000 0.00 0.00 45.19 3.35
2551 2618 5.141182 AGTCGGAAGATTAGATTAGGCTCA 58.859 41.667 0.00 0.00 45.19 4.26
2561 2628 7.011202 GGCTTAAACCTAAAGTCGGAAGATTAG 59.989 40.741 0.00 0.00 45.19 1.73
2567 2634 4.320870 CAGGCTTAAACCTAAAGTCGGAA 58.679 43.478 0.00 0.00 38.26 4.30
2578 2645 2.989881 GCACGGGCAGGCTTAAACC 61.990 63.158 3.77 0.00 40.72 3.27
2586 2653 0.468226 TAAATCTAGGCACGGGCAGG 59.532 55.000 13.89 0.00 43.71 4.85
2592 2936 2.800544 CACCCGAATAAATCTAGGCACG 59.199 50.000 0.00 0.00 0.00 5.34
2607 2951 0.035152 TTAGGTAGCGTCTCACCCGA 60.035 55.000 0.00 0.00 35.25 5.14
2630 2974 4.166246 TCTACTCGGCTTAGATCTCCAA 57.834 45.455 0.00 0.00 0.00 3.53
2685 3029 7.185453 GCTTGAAATCATGAGCTACTAACAAG 58.815 38.462 0.09 9.01 34.83 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.