Multiple sequence alignment - TraesCS2B01G366300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G366300 chr2B 100.000 8481 0 0 1 8481 522082554 522091034 0.000000e+00 15662.0
1 TraesCS2B01G366300 chr2B 93.431 137 9 0 8213 8349 587129995 587129859 4.010000e-48 204.0
2 TraesCS2B01G366300 chr2B 92.254 142 8 3 5517 5657 166470771 166470910 1.870000e-46 198.0
3 TraesCS2B01G366300 chr2B 94.531 128 6 1 5517 5643 288943595 288943722 6.720000e-46 196.0
4 TraesCS2B01G366300 chr2B 90.000 90 7 2 7990 8078 22317049 22316961 1.930000e-21 115.0
5 TraesCS2B01G366300 chr2B 100.000 36 0 0 7572 7607 522090089 522090124 5.490000e-07 67.6
6 TraesCS2B01G366300 chr2B 100.000 36 0 0 7536 7571 522090125 522090160 5.490000e-07 67.6
7 TraesCS2B01G366300 chr2A 92.731 7718 275 105 1 7571 586449299 586456877 0.000000e+00 10881.0
8 TraesCS2B01G366300 chr2A 91.803 305 24 1 7572 7875 586456842 586457146 2.830000e-114 424.0
9 TraesCS2B01G366300 chr2A 96.575 146 3 1 8075 8220 586457230 586457373 3.060000e-59 241.0
10 TraesCS2B01G366300 chr2A 96.269 134 5 0 8344 8477 586457375 586457508 3.990000e-53 220.0
11 TraesCS2B01G366300 chr2D 92.884 6802 271 80 829 7483 442982401 442989136 0.000000e+00 9683.0
12 TraesCS2B01G366300 chr2D 94.156 770 12 7 1 770 442979954 442980690 0.000000e+00 1142.0
13 TraesCS2B01G366300 chr2D 94.079 304 18 0 7572 7875 442989164 442989467 6.000000e-126 462.0
14 TraesCS2B01G366300 chr2D 94.737 152 3 3 8075 8226 442989553 442989699 1.840000e-56 231.0
15 TraesCS2B01G366300 chr2D 92.366 131 9 1 8344 8474 442989692 442989821 1.450000e-42 185.0
16 TraesCS2B01G366300 chr2D 89.362 94 4 4 7991 8078 376700734 376700827 6.960000e-21 113.0
17 TraesCS2B01G366300 chr2D 88.421 95 8 3 7984 8078 302248006 302248097 2.500000e-20 111.0
18 TraesCS2B01G366300 chr3A 81.139 281 40 8 4609 4883 550434999 550434726 6.670000e-51 213.0
19 TraesCS2B01G366300 chr3A 94.737 133 7 0 8218 8350 598561824 598561956 3.100000e-49 207.0
20 TraesCS2B01G366300 chr3A 92.958 142 6 4 8208 8346 414544409 414544269 4.010000e-48 204.0
21 TraesCS2B01G366300 chr3D 96.094 128 5 0 8215 8342 67064781 67064908 8.630000e-50 209.0
22 TraesCS2B01G366300 chr3D 93.571 140 8 1 8208 8346 432814311 432814172 3.100000e-49 207.0
23 TraesCS2B01G366300 chr3D 77.903 267 52 5 4606 4871 105450858 105451118 8.810000e-35 159.0
24 TraesCS2B01G366300 chr3B 94.776 134 5 1 8217 8350 139036279 139036148 3.100000e-49 207.0
25 TraesCS2B01G366300 chr3B 91.781 146 12 0 8219 8364 578615320 578615465 4.010000e-48 204.0
26 TraesCS2B01G366300 chr3B 79.930 284 45 8 4606 4883 157235199 157235476 1.870000e-46 198.0
27 TraesCS2B01G366300 chr3B 91.852 135 9 2 5517 5650 438545886 438545753 4.040000e-43 187.0
28 TraesCS2B01G366300 chr3B 88.350 103 4 5 7990 8090 130118181 130118277 5.380000e-22 117.0
29 TraesCS2B01G366300 chr3B 90.000 90 6 2 7991 8080 65214140 65214054 6.960000e-21 113.0
30 TraesCS2B01G366300 chr7B 94.697 132 7 0 8216 8347 713622962 713622831 1.120000e-48 206.0
31 TraesCS2B01G366300 chr6D 93.431 137 9 0 8211 8347 323285668 323285532 4.010000e-48 204.0
32 TraesCS2B01G366300 chr6D 93.798 129 7 1 5517 5644 365847011 365846883 8.690000e-45 193.0
33 TraesCS2B01G366300 chr5A 93.478 138 7 1 8205 8342 9840817 9840952 4.010000e-48 204.0
34 TraesCS2B01G366300 chr5A 83.491 212 28 5 4606 4816 340133369 340133574 3.120000e-44 191.0
35 TraesCS2B01G366300 chr5B 91.667 144 11 1 8208 8351 19792152 19792010 1.870000e-46 198.0
36 TraesCS2B01G366300 chr4A 90.196 153 14 1 8200 8351 236160646 236160494 1.870000e-46 198.0
37 TraesCS2B01G366300 chr1B 90.260 154 12 2 8217 8369 51400852 51400701 1.870000e-46 198.0
38 TraesCS2B01G366300 chr1B 86.928 153 19 1 4610 4762 345320601 345320450 4.070000e-38 171.0
39 TraesCS2B01G366300 chr6A 92.481 133 9 1 5512 5643 506642961 506642829 1.120000e-43 189.0
40 TraesCS2B01G366300 chr6B 90.780 141 11 2 5517 5656 44661241 44661380 4.040000e-43 187.0
41 TraesCS2B01G366300 chr4B 90.780 141 11 2 5517 5656 302859119 302858980 4.040000e-43 187.0
42 TraesCS2B01G366300 chr1D 86.624 157 20 1 4606 4762 267794489 267794644 1.130000e-38 172.0
43 TraesCS2B01G366300 chr1D 86.408 103 11 3 7991 8093 241268662 241268563 9.000000e-20 110.0
44 TraesCS2B01G366300 chr1A 87.013 154 18 2 4609 4762 335028697 335028546 1.130000e-38 172.0
45 TraesCS2B01G366300 chr7D 87.755 98 9 3 7989 8086 498229836 498229930 2.500000e-20 111.0
46 TraesCS2B01G366300 chr7A 87.755 98 9 3 7984 8081 82512311 82512405 2.500000e-20 111.0
47 TraesCS2B01G366300 chr4D 88.421 95 8 2 7984 8078 494787189 494787280 2.500000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G366300 chr2B 522082554 522091034 8480 False 5265.733333 15662 100.0000 1 8481 3 chr2B.!!$F3 8480
1 TraesCS2B01G366300 chr2A 586449299 586457508 8209 False 2941.500000 10881 94.3445 1 8477 4 chr2A.!!$F1 8476
2 TraesCS2B01G366300 chr2D 442979954 442989821 9867 False 2340.600000 9683 93.6444 1 8474 5 chr2D.!!$F3 8473

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
409 410 0.178891 AGCAGGAACAGGAGGAGGAA 60.179 55.000 0.00 0.00 0.00 3.36 F
913 2572 0.252103 TGACTGGTCTACCCACCCTC 60.252 60.000 0.00 0.00 38.72 4.30 F
1429 3114 0.235665 CTAACTTGTGGTGCTGTGCG 59.764 55.000 0.00 0.00 0.00 5.34 F
3291 5020 0.036732 TTGGGTCCTGCTGTTAGCTG 59.963 55.000 0.00 1.73 42.97 4.24 F
4354 6117 0.376152 CCTGTCATGATCGTTGCTGC 59.624 55.000 0.00 0.00 0.00 5.25 F
5463 7238 1.148027 TGGTGCCAGGGGAAAATTGTA 59.852 47.619 0.00 0.00 0.00 2.41 F
5506 7299 2.062971 ACAAGAGCCATATTGCTGGG 57.937 50.000 5.94 0.00 42.95 4.45 F
6747 8584 2.035704 CCACAATAGAGATCTCGCTGCT 59.964 50.000 16.97 1.86 34.09 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1429 3114 0.173481 TGGCATACAGAGACAGCGAC 59.827 55.000 0.00 0.00 0.00 5.19 R
1820 3523 1.351017 TGGGAGTTAGGCTGAAACAGG 59.649 52.381 0.00 0.00 31.21 4.00 R
3303 5044 3.884037 ATTCAAGGAAGTCCAACAGGT 57.116 42.857 0.00 0.00 38.89 4.00 R
4756 6528 0.608640 AGGCCTAAACGTGGACAGAG 59.391 55.000 1.29 0.00 34.31 3.35 R
5542 7337 0.249398 GGTTCTGGCACGTGGATAGT 59.751 55.000 18.88 0.00 0.00 2.12 R
6708 8545 1.114627 GGCTTCCCCCAATGAATGTC 58.885 55.000 0.00 0.00 0.00 3.06 R
6814 8651 2.642807 AGGTAGCCCTGCAGAAGTAAAA 59.357 45.455 17.39 0.00 40.58 1.52 R
8221 10061 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 1.364626 CTGATCAACCTGGCGCTGAC 61.365 60.000 7.64 0.00 0.00 3.51
88 89 1.636769 GGGCCGGGAAGAAGGAGATT 61.637 60.000 2.18 0.00 0.00 2.40
294 295 1.600636 CCAAGGACAAGGCGCAGAA 60.601 57.895 10.83 0.00 0.00 3.02
409 410 0.178891 AGCAGGAACAGGAGGAGGAA 60.179 55.000 0.00 0.00 0.00 3.36
424 428 1.970114 GGAAGAGCAGCAGCAGCAA 60.970 57.895 12.92 0.00 45.49 3.91
562 566 2.618816 GGTCATCACCTGCCTCATCAAA 60.619 50.000 0.00 0.00 40.00 2.69
606 613 1.070843 CGGCGACAAGTGTAAACTGTG 60.071 52.381 0.00 0.00 0.00 3.66
662 669 3.870419 ACATTCACCAAAAATGTGTGTGC 59.130 39.130 0.97 0.00 43.76 4.57
663 670 3.883830 TTCACCAAAAATGTGTGTGCT 57.116 38.095 0.00 0.00 35.25 4.40
664 671 3.435105 TCACCAAAAATGTGTGTGCTC 57.565 42.857 0.00 0.00 35.25 4.26
665 672 2.118683 CACCAAAAATGTGTGTGCTCG 58.881 47.619 0.00 0.00 0.00 5.03
666 673 2.020720 ACCAAAAATGTGTGTGCTCGA 58.979 42.857 0.00 0.00 0.00 4.04
667 674 2.223479 ACCAAAAATGTGTGTGCTCGAC 60.223 45.455 0.00 0.00 0.00 4.20
668 675 2.033299 CCAAAAATGTGTGTGCTCGACT 59.967 45.455 0.00 0.00 0.00 4.18
713 720 7.585286 AAAATACAACTAGCGAAATCGTACA 57.415 32.000 4.59 0.00 42.22 2.90
770 777 2.953466 TCTCCCGTCCGAGTAAAATG 57.047 50.000 0.00 0.00 0.00 2.32
771 778 2.173519 TCTCCCGTCCGAGTAAAATGT 58.826 47.619 0.00 0.00 0.00 2.71
772 779 3.355378 TCTCCCGTCCGAGTAAAATGTA 58.645 45.455 0.00 0.00 0.00 2.29
773 780 3.763360 TCTCCCGTCCGAGTAAAATGTAA 59.237 43.478 0.00 0.00 0.00 2.41
776 783 6.096705 TCTCCCGTCCGAGTAAAATGTAATTA 59.903 38.462 0.00 0.00 33.67 1.40
777 784 6.275335 TCCCGTCCGAGTAAAATGTAATTAG 58.725 40.000 0.00 0.00 33.67 1.73
778 785 6.044682 CCCGTCCGAGTAAAATGTAATTAGT 58.955 40.000 0.00 0.00 33.67 2.24
780 787 7.254218 CCCGTCCGAGTAAAATGTAATTAGTTC 60.254 40.741 0.00 0.00 33.67 3.01
781 788 7.490402 CCGTCCGAGTAAAATGTAATTAGTTCT 59.510 37.037 0.00 0.00 33.67 3.01
783 790 8.529911 GTCCGAGTAAAATGTAATTAGTTCTCG 58.470 37.037 0.00 0.00 39.98 4.04
784 791 8.246180 TCCGAGTAAAATGTAATTAGTTCTCGT 58.754 33.333 0.00 0.00 39.37 4.18
785 792 8.318876 CCGAGTAAAATGTAATTAGTTCTCGTG 58.681 37.037 0.00 0.00 39.37 4.35
786 793 7.839837 CGAGTAAAATGTAATTAGTTCTCGTGC 59.160 37.037 0.00 0.00 37.92 5.34
787 794 8.773404 AGTAAAATGTAATTAGTTCTCGTGCT 57.227 30.769 0.00 0.00 33.67 4.40
788 795 9.865321 AGTAAAATGTAATTAGTTCTCGTGCTA 57.135 29.630 0.00 0.00 33.67 3.49
790 797 8.773404 AAAATGTAATTAGTTCTCGTGCTAGT 57.227 30.769 0.00 0.00 33.67 2.57
792 799 9.517609 AAATGTAATTAGTTCTCGTGCTAGTAG 57.482 33.333 0.00 0.00 33.67 2.57
794 801 8.722480 TGTAATTAGTTCTCGTGCTAGTAGTA 57.278 34.615 0.00 0.00 0.00 1.82
795 802 8.607459 TGTAATTAGTTCTCGTGCTAGTAGTAC 58.393 37.037 8.24 8.24 0.00 2.73
802 809 3.850657 CGTGCTAGTAGTACGTACTCC 57.149 52.381 30.53 20.39 46.68 3.85
803 810 3.452474 CGTGCTAGTAGTACGTACTCCT 58.548 50.000 30.53 26.09 46.68 3.69
811 2458 2.111384 AGTACGTACTCCTACTCCCGA 58.889 52.381 22.45 0.00 0.00 5.14
852 2511 3.432588 CGACGACGGAGAGCAGGT 61.433 66.667 0.00 0.00 35.72 4.00
874 2533 3.727258 TGGCATAACCAGGGCGCT 61.727 61.111 7.64 0.00 46.36 5.92
912 2571 0.252284 CTGACTGGTCTACCCACCCT 60.252 60.000 0.00 0.00 38.72 4.34
913 2572 0.252103 TGACTGGTCTACCCACCCTC 60.252 60.000 0.00 0.00 38.72 4.30
1239 2924 3.066203 GTGAAGTGTTTGACGGAATGGTT 59.934 43.478 0.00 0.00 0.00 3.67
1254 2939 2.203153 GTTGGTCCGTGCAGTGGT 60.203 61.111 4.90 0.00 0.00 4.16
1403 3088 3.650647 TGGTGAGCCCATTTCTGTC 57.349 52.632 0.00 0.00 38.72 3.51
1421 3106 6.229936 TCTGTCTGTTAACTAACTTGTGGT 57.770 37.500 7.22 0.00 37.12 4.16
1423 3108 4.573201 TGTCTGTTAACTAACTTGTGGTGC 59.427 41.667 7.22 0.00 37.12 5.01
1429 3114 0.235665 CTAACTTGTGGTGCTGTGCG 59.764 55.000 0.00 0.00 0.00 5.34
1476 3173 2.740714 GCGAATGGTGCGACCTGTC 61.741 63.158 6.83 3.84 39.58 3.51
1487 3184 2.135933 GCGACCTGTCTACATTATGGC 58.864 52.381 0.00 0.00 0.00 4.40
1587 3286 1.474143 GGCATGCACTCCTCTCCTTAC 60.474 57.143 21.36 0.00 0.00 2.34
1644 3345 7.792374 TTAGCTGATGACATAACTTGATTCC 57.208 36.000 0.00 0.00 0.00 3.01
1741 3442 6.091849 CAGTATGTATGTGCCAATGCTATCTC 59.908 42.308 0.00 0.00 38.71 2.75
1787 3490 6.397831 TTCTGTATTGTCGTCGTAAATTGG 57.602 37.500 0.00 0.00 0.00 3.16
1863 3566 5.773239 GCACAAGCGTTATACTGTTAAGA 57.227 39.130 0.00 0.00 0.00 2.10
1928 3633 7.378181 TGCATCTCCTTTTCCATTTTTCTTAC 58.622 34.615 0.00 0.00 0.00 2.34
1966 3671 7.687941 TGAGTATTCTCCTTTTTGTTCCATC 57.312 36.000 0.00 0.00 39.75 3.51
2016 3721 6.942532 ATGAAAAGCACTGTTCTTTCTACA 57.057 33.333 5.92 7.57 33.06 2.74
2142 3847 5.651139 GCCACTGATAGATTGGAATGCATAT 59.349 40.000 0.00 0.00 31.39 1.78
2174 3879 7.962918 ACAAACATTTTATCGATTGCTAGTGTC 59.037 33.333 1.71 0.00 0.00 3.67
2176 3881 7.609760 ACATTTTATCGATTGCTAGTGTCAA 57.390 32.000 1.71 0.00 0.00 3.18
2184 3894 0.322456 TGCTAGTGTCAATGCCCACC 60.322 55.000 0.00 0.00 31.88 4.61
2186 3896 1.683011 GCTAGTGTCAATGCCCACCAT 60.683 52.381 0.00 0.00 35.06 3.55
2187 3897 2.019249 CTAGTGTCAATGCCCACCATG 58.981 52.381 0.41 0.00 33.49 3.66
2188 3898 0.405198 AGTGTCAATGCCCACCATGA 59.595 50.000 0.00 0.00 33.49 3.07
2189 3899 1.006281 AGTGTCAATGCCCACCATGAT 59.994 47.619 0.00 0.00 33.49 2.45
2190 3900 1.135527 GTGTCAATGCCCACCATGATG 59.864 52.381 0.00 0.00 33.49 3.07
2576 4292 6.183360 GCACCATGACTGTTTGTAGTATGTAC 60.183 42.308 0.00 0.00 0.00 2.90
2824 4540 1.680249 GGAACAAGTGCAGGAGATCCC 60.680 57.143 0.00 0.00 36.42 3.85
3111 4832 4.180057 GTTGTCTTGTCCATGTTTTTGCA 58.820 39.130 0.00 0.00 0.00 4.08
3122 4843 5.870433 TCCATGTTTTTGCATTTGCTATCTG 59.130 36.000 3.94 0.00 42.66 2.90
3203 4924 8.147642 AGCATTGTATCAGTTTAAGCTATGTC 57.852 34.615 0.00 0.00 0.00 3.06
3227 4948 8.017946 GTCAAAATTCTACAAGTGAAGATGTCC 58.982 37.037 0.00 0.00 0.00 4.02
3291 5020 0.036732 TTGGGTCCTGCTGTTAGCTG 59.963 55.000 0.00 1.73 42.97 4.24
3292 5021 1.746991 GGGTCCTGCTGTTAGCTGC 60.747 63.158 0.00 1.37 42.97 5.25
3303 5044 6.142818 TGCTGTTAGCTGCTTTTCTTTTTA 57.857 33.333 7.79 0.00 42.97 1.52
3617 5364 5.277828 GCATCTTCCCGAAACCATATTGTAC 60.278 44.000 0.00 0.00 0.00 2.90
3657 5404 5.982890 ATATTTTCTAATTGGCCCGATGG 57.017 39.130 0.00 0.00 0.00 3.51
3748 5496 5.594317 GGGCTACAACACCATTATTCAGAAT 59.406 40.000 0.20 0.20 0.00 2.40
3749 5497 6.096846 GGGCTACAACACCATTATTCAGAATT 59.903 38.462 0.00 0.00 0.00 2.17
3750 5498 7.363793 GGGCTACAACACCATTATTCAGAATTT 60.364 37.037 0.00 0.00 0.00 1.82
3752 5500 9.423061 GCTACAACACCATTATTCAGAATTTTT 57.577 29.630 0.00 0.00 0.00 1.94
4028 5782 1.598701 GCAAGCGGGCCTCATTTTCT 61.599 55.000 0.84 0.00 0.00 2.52
4098 5854 7.490962 TCCTTTGTTAGTGTCAACAACATAG 57.509 36.000 1.12 9.48 45.52 2.23
4205 5967 4.261572 GCTGCATTTACTTGGTCACTGAAA 60.262 41.667 0.00 0.00 0.00 2.69
4211 5973 7.651808 CATTTACTTGGTCACTGAAAGAATGT 58.348 34.615 0.00 0.00 37.43 2.71
4309 6072 9.193806 AGGAATATTGCCATGTTTATATCCATC 57.806 33.333 2.98 0.00 0.00 3.51
4348 6111 3.973206 TTTACACCCTGTCATGATCGT 57.027 42.857 0.00 0.00 0.00 3.73
4354 6117 0.376152 CCTGTCATGATCGTTGCTGC 59.624 55.000 0.00 0.00 0.00 5.25
4522 6285 4.332819 GTCAAAGGCAGCTACGATACAAAT 59.667 41.667 0.00 0.00 0.00 2.32
4525 6288 1.873591 GGCAGCTACGATACAAATGGG 59.126 52.381 0.00 0.00 0.00 4.00
4601 6364 2.141535 GCCTTATCGAGCCACACTAG 57.858 55.000 0.00 0.00 0.00 2.57
4604 6367 2.294791 CCTTATCGAGCCACACTAGAGG 59.705 54.545 0.00 0.00 33.15 3.69
4756 6528 1.688735 GGAAATATTGCTTGCCCTCCC 59.311 52.381 0.00 0.00 0.00 4.30
4782 6554 2.496871 TCCACGTTTAGGCCTTATCGAA 59.503 45.455 24.64 5.03 0.00 3.71
4924 6699 7.811236 AGAAGTCATATGTTGTTGAATGCTTTG 59.189 33.333 1.90 0.00 0.00 2.77
4942 6717 4.753233 CTTTGCAGACACTAGTAGATGCT 58.247 43.478 19.89 2.77 34.59 3.79
4943 6718 4.808414 TTGCAGACACTAGTAGATGCTT 57.192 40.909 19.89 0.00 34.59 3.91
4945 6720 4.498241 TGCAGACACTAGTAGATGCTTTG 58.502 43.478 19.89 0.00 34.59 2.77
4954 6729 3.341823 AGTAGATGCTTTGCACAAGGAG 58.658 45.455 9.63 0.00 43.04 3.69
4965 6740 2.642311 TGCACAAGGAGGTTGGAGATAA 59.358 45.455 0.00 0.00 40.90 1.75
5008 6783 2.548057 AGTGTTGTCATTGGCGTGTAAG 59.452 45.455 0.00 0.00 0.00 2.34
5020 6795 2.256174 GCGTGTAAGTGCGATGAACTA 58.744 47.619 0.00 0.00 0.00 2.24
5067 6842 7.945033 TTTTTGTGGATTCAAAAGATGCTAC 57.055 32.000 5.10 0.00 44.40 3.58
5076 6851 7.442666 GGATTCAAAAGATGCTACTAGTAAGGG 59.557 40.741 3.76 0.00 0.00 3.95
5077 6852 7.490657 TTCAAAAGATGCTACTAGTAAGGGA 57.509 36.000 3.76 0.00 0.00 4.20
5146 6921 8.127327 AGAATCACTCATCTGCATTATTTTTCG 58.873 33.333 0.00 0.00 0.00 3.46
5157 6932 9.474920 TCTGCATTATTTTTCGAAGTTCATTTT 57.525 25.926 3.32 0.00 0.00 1.82
5341 7116 2.489722 GAGGATGAGGTTCACAAAAGGC 59.510 50.000 0.00 0.00 0.00 4.35
5393 7168 4.993705 AAGGTCAGGTTAGGATCAACAA 57.006 40.909 0.00 0.00 0.00 2.83
5458 7233 1.696884 GAAATTGGTGCCAGGGGAAAA 59.303 47.619 0.00 0.00 0.00 2.29
5463 7238 1.148027 TGGTGCCAGGGGAAAATTGTA 59.852 47.619 0.00 0.00 0.00 2.41
5506 7299 2.062971 ACAAGAGCCATATTGCTGGG 57.937 50.000 5.94 0.00 42.95 4.45
5539 7334 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
5542 7337 2.221299 AGGGGTGCGTGGAAGCTAA 61.221 57.895 0.00 0.00 38.13 3.09
5601 7396 6.567602 ATCTTATGGGTTTCAACTCTAGCT 57.432 37.500 0.00 0.00 0.00 3.32
5655 7450 2.735663 TGTTGCTGTTTGTTGTTGCTTG 59.264 40.909 0.00 0.00 0.00 4.01
5664 7459 6.159293 TGTTTGTTGTTGCTTGTACATTTGA 58.841 32.000 0.00 0.00 0.00 2.69
5672 7467 9.619316 TTGTTGCTTGTACATTTGAATATACAC 57.381 29.630 0.00 0.00 28.77 2.90
5773 7568 6.649557 GCGGCCAGACTAACTGTATTTATTAT 59.350 38.462 2.24 0.00 44.40 1.28
5774 7569 7.172703 GCGGCCAGACTAACTGTATTTATTATT 59.827 37.037 2.24 0.00 44.40 1.40
5775 7570 9.701098 CGGCCAGACTAACTGTATTTATTATTA 57.299 33.333 2.24 0.00 44.40 0.98
5957 7753 5.731591 ACATACCCTACTCTGTTTTACTGC 58.268 41.667 0.00 0.00 0.00 4.40
6006 7802 9.887629 AGATAGTTATATTGCTTCTCCATCATG 57.112 33.333 0.00 0.00 0.00 3.07
6103 7899 2.299013 TGCTCTGTTGTACCAGTACCAG 59.701 50.000 5.53 6.67 35.26 4.00
6105 7901 3.508793 GCTCTGTTGTACCAGTACCAGTA 59.491 47.826 5.53 0.00 35.26 2.74
6158 7955 4.025040 TGCACTTGGAGATCAAATCACT 57.975 40.909 0.00 0.00 34.56 3.41
6167 7964 5.163550 TGGAGATCAAATCACTACACCGTAG 60.164 44.000 0.00 0.00 0.00 3.51
6208 8005 7.306632 GCCTACGAGTTATTGTATCACAACATC 60.307 40.741 0.00 0.00 41.40 3.06
6220 8017 7.683746 TGTATCACAACATCACATTTATGACG 58.316 34.615 0.00 0.00 0.00 4.35
6221 8018 6.983474 ATCACAACATCACATTTATGACGA 57.017 33.333 0.00 0.00 0.00 4.20
6222 8019 6.983474 TCACAACATCACATTTATGACGAT 57.017 33.333 0.00 0.00 0.00 3.73
6223 8020 6.774084 TCACAACATCACATTTATGACGATG 58.226 36.000 17.39 17.39 41.96 3.84
6300 8111 7.549615 AAATACACGGGCTTCTTATAACTTC 57.450 36.000 0.00 0.00 0.00 3.01
6561 8398 4.959631 TTTCGTGTACTCGTGATTTGTC 57.040 40.909 16.12 0.00 0.00 3.18
6636 8473 3.855379 TCATTTATACGTGCGTGACTGTC 59.145 43.478 7.55 0.00 0.00 3.51
6708 8545 6.392354 TCCTAATGACCAGTACTTGTTTACG 58.608 40.000 0.49 0.00 0.00 3.18
6746 8583 2.402305 CCACAATAGAGATCTCGCTGC 58.598 52.381 16.97 0.00 34.09 5.25
6747 8584 2.035704 CCACAATAGAGATCTCGCTGCT 59.964 50.000 16.97 1.86 34.09 4.24
6772 8609 6.039493 TGCTCCAACGTAAAAACCTTTTGATA 59.961 34.615 0.00 0.00 0.00 2.15
7066 8903 8.633561 TGTTACTCAGACATATACATTGGAGAG 58.366 37.037 0.00 0.00 0.00 3.20
7172 9009 2.517959 TGCAGGCAAGTCAATAAAGCT 58.482 42.857 0.00 0.00 0.00 3.74
7176 9013 4.009675 CAGGCAAGTCAATAAAGCTACCA 58.990 43.478 0.00 0.00 0.00 3.25
7264 9101 9.577110 AACAAAAGAATGCATGTATAACATCTG 57.423 29.630 0.00 0.00 36.53 2.90
7296 9133 5.705441 TCTTGTCGGAAATTTGTAGAGCAAT 59.295 36.000 0.00 0.00 36.89 3.56
7327 9164 7.056635 CAGAAATAGTAATCCCACCAAGTGAT 58.943 38.462 0.00 0.00 35.23 3.06
7328 9165 7.012704 CAGAAATAGTAATCCCACCAAGTGATG 59.987 40.741 0.00 0.00 35.23 3.07
7329 9166 6.575244 AATAGTAATCCCACCAAGTGATGA 57.425 37.500 0.00 0.00 35.23 2.92
7488 9325 6.569780 TCAAGCAAGCTAGTTAATATCGACA 58.430 36.000 0.00 0.00 0.00 4.35
7520 9357 2.299993 TCTTCTAGCATTGGCAGACG 57.700 50.000 0.00 0.00 44.61 4.18
7542 9379 9.121658 AGACGATATTTCTCACACTATGTTAGA 57.878 33.333 0.00 0.00 29.56 2.10
7543 9380 9.900710 GACGATATTTCTCACACTATGTTAGAT 57.099 33.333 0.00 0.00 31.49 1.98
7552 9389 9.917129 TCTCACACTATGTTAGATTTAAAACGA 57.083 29.630 0.00 0.00 26.71 3.85
7561 9398 7.970384 TGTTAGATTTAAAACGATAGCAGTGG 58.030 34.615 0.00 0.00 42.67 4.00
7562 9399 7.604927 TGTTAGATTTAAAACGATAGCAGTGGT 59.395 33.333 0.00 0.00 42.67 4.16
7563 9400 8.448615 GTTAGATTTAAAACGATAGCAGTGGTT 58.551 33.333 0.00 0.00 42.67 3.67
7564 9401 6.842163 AGATTTAAAACGATAGCAGTGGTTG 58.158 36.000 0.00 0.00 42.67 3.77
7565 9402 5.365403 TTTAAAACGATAGCAGTGGTTGG 57.635 39.130 0.00 0.00 42.67 3.77
7566 9403 1.165270 AAACGATAGCAGTGGTTGGC 58.835 50.000 0.00 0.00 42.67 4.52
7567 9404 0.036164 AACGATAGCAGTGGTTGGCA 59.964 50.000 0.00 0.00 42.67 4.92
7568 9405 0.036164 ACGATAGCAGTGGTTGGCAA 59.964 50.000 0.00 0.00 42.67 4.52
7569 9406 1.340017 ACGATAGCAGTGGTTGGCAAT 60.340 47.619 1.92 0.00 42.67 3.56
7570 9407 1.331756 CGATAGCAGTGGTTGGCAATC 59.668 52.381 1.92 2.40 0.00 2.67
7571 9408 2.368439 GATAGCAGTGGTTGGCAATCA 58.632 47.619 9.58 9.58 0.00 2.57
7572 9409 2.512692 TAGCAGTGGTTGGCAATCAT 57.487 45.000 17.40 2.80 0.00 2.45
7573 9410 0.892755 AGCAGTGGTTGGCAATCATG 59.107 50.000 17.40 15.66 0.00 3.07
7574 9411 0.604578 GCAGTGGTTGGCAATCATGT 59.395 50.000 17.40 4.41 0.00 3.21
7575 9412 1.001181 GCAGTGGTTGGCAATCATGTT 59.999 47.619 17.40 2.91 0.00 2.71
7576 9413 2.230992 GCAGTGGTTGGCAATCATGTTA 59.769 45.455 17.40 0.00 0.00 2.41
7577 9414 3.674138 GCAGTGGTTGGCAATCATGTTAG 60.674 47.826 17.40 6.37 0.00 2.34
7586 9423 8.655970 GGTTGGCAATCATGTTAGATTTAAAAC 58.344 33.333 5.42 0.00 36.13 2.43
7618 9455 5.358160 GTGGTTGGCAATCTCTTTATAAGCT 59.642 40.000 12.41 0.00 0.00 3.74
7693 9530 7.288810 ACAAGGAGTGCAAAATAATTCTGAA 57.711 32.000 0.00 0.00 0.00 3.02
7702 9539 5.060940 GCAAAATAATTCTGAACGCCTGAAC 59.939 40.000 0.00 0.00 35.90 3.18
7717 9554 3.489229 GCCTGAACTGTTCTTGGTTGTTC 60.489 47.826 20.18 6.92 37.92 3.18
7720 9557 3.128589 TGAACTGTTCTTGGTTGTTCTGC 59.871 43.478 20.18 0.00 38.17 4.26
7752 9589 7.517320 ACCATTGACATATATACCTGCTTTGA 58.483 34.615 0.00 0.00 0.00 2.69
7794 9632 9.440773 TCTTGAGATGTTATGCCATGTATAATC 57.559 33.333 0.00 0.00 0.00 1.75
7798 9636 9.096160 GAGATGTTATGCCATGTATAATCTGAG 57.904 37.037 0.00 0.00 0.00 3.35
7827 9665 1.273986 TAGCCTCCCAAGCTGCATGA 61.274 55.000 6.42 0.00 41.71 3.07
7833 9671 1.035385 CCCAAGCTGCATGATGCTCA 61.035 55.000 19.19 0.00 45.31 4.26
7871 9709 5.054477 GCTCACACTTCTGTTAGGTTACAA 58.946 41.667 0.00 0.00 0.00 2.41
7875 9715 7.051623 TCACACTTCTGTTAGGTTACAATGTT 58.948 34.615 0.00 0.00 0.00 2.71
7876 9716 7.225931 TCACACTTCTGTTAGGTTACAATGTTC 59.774 37.037 0.00 0.00 0.00 3.18
7879 9719 7.228706 CACTTCTGTTAGGTTACAATGTTCCTT 59.771 37.037 13.18 0.00 0.00 3.36
7880 9720 7.228706 ACTTCTGTTAGGTTACAATGTTCCTTG 59.771 37.037 13.18 0.00 0.00 3.61
7881 9721 5.472137 TCTGTTAGGTTACAATGTTCCTTGC 59.528 40.000 13.18 8.53 0.00 4.01
7882 9722 5.133941 TGTTAGGTTACAATGTTCCTTGCA 58.866 37.500 13.18 10.35 0.00 4.08
7883 9723 5.009210 TGTTAGGTTACAATGTTCCTTGCAC 59.991 40.000 13.18 9.50 0.00 4.57
7884 9724 2.552315 AGGTTACAATGTTCCTTGCACG 59.448 45.455 0.00 0.00 0.00 5.34
7885 9725 2.351350 GGTTACAATGTTCCTTGCACGG 60.351 50.000 1.99 1.99 0.00 4.94
7886 9726 2.264005 TACAATGTTCCTTGCACGGT 57.736 45.000 9.36 0.00 0.00 4.83
7887 9727 0.951558 ACAATGTTCCTTGCACGGTC 59.048 50.000 9.36 4.86 0.00 4.79
7888 9728 0.950836 CAATGTTCCTTGCACGGTCA 59.049 50.000 9.36 10.21 0.00 4.02
7889 9729 0.951558 AATGTTCCTTGCACGGTCAC 59.048 50.000 9.36 8.08 0.00 3.67
7890 9730 0.179032 ATGTTCCTTGCACGGTCACA 60.179 50.000 15.79 15.79 0.00 3.58
7891 9731 1.092921 TGTTCCTTGCACGGTCACAC 61.093 55.000 9.36 3.34 0.00 3.82
7892 9732 1.092921 GTTCCTTGCACGGTCACACA 61.093 55.000 9.36 0.00 0.00 3.72
7893 9733 0.813610 TTCCTTGCACGGTCACACAG 60.814 55.000 9.36 0.00 0.00 3.66
7894 9734 2.253758 CCTTGCACGGTCACACAGG 61.254 63.158 0.00 0.00 0.00 4.00
7895 9735 2.203139 TTGCACGGTCACACAGGG 60.203 61.111 0.00 0.00 0.00 4.45
7896 9736 2.940890 CTTGCACGGTCACACAGGGT 62.941 60.000 0.00 0.00 0.00 4.34
7904 9744 3.150949 CACACAGGGTGCCTCTCA 58.849 61.111 0.00 0.00 41.36 3.27
7905 9745 1.302033 CACACAGGGTGCCTCTCAC 60.302 63.158 0.00 0.00 41.36 3.51
7906 9746 2.047844 CACAGGGTGCCTCTCACG 60.048 66.667 0.00 0.00 46.56 4.35
7920 9760 2.599082 CTCTCACGCTCCGAACAATAAC 59.401 50.000 0.00 0.00 0.00 1.89
7976 9816 3.413846 TTATTTGCCTGCCATTTTGCA 57.586 38.095 0.00 0.00 39.37 4.08
7987 9827 3.380637 TGCCATTTTGCATTTTGCTGTTT 59.619 34.783 0.75 0.00 45.31 2.83
7989 9829 5.066893 TGCCATTTTGCATTTTGCTGTTTAA 59.933 32.000 0.75 0.00 45.31 1.52
7992 9832 7.271008 GCCATTTTGCATTTTGCTGTTTAATAC 59.729 33.333 0.75 0.00 45.31 1.89
7994 9834 9.532697 CATTTTGCATTTTGCTGTTTAATACTC 57.467 29.630 0.75 0.00 45.31 2.59
7995 9835 7.650834 TTTGCATTTTGCTGTTTAATACTCC 57.349 32.000 0.75 0.00 45.31 3.85
7996 9836 5.719173 TGCATTTTGCTGTTTAATACTCCC 58.281 37.500 0.75 0.00 45.31 4.30
7997 9837 5.480073 TGCATTTTGCTGTTTAATACTCCCT 59.520 36.000 0.75 0.00 45.31 4.20
7998 9838 6.036470 GCATTTTGCTGTTTAATACTCCCTC 58.964 40.000 0.00 0.00 40.96 4.30
7999 9839 6.564328 CATTTTGCTGTTTAATACTCCCTCC 58.436 40.000 0.00 0.00 0.00 4.30
8000 9840 3.536956 TGCTGTTTAATACTCCCTCCG 57.463 47.619 0.00 0.00 0.00 4.63
8001 9841 2.835764 TGCTGTTTAATACTCCCTCCGT 59.164 45.455 0.00 0.00 0.00 4.69
8002 9842 4.025360 TGCTGTTTAATACTCCCTCCGTA 58.975 43.478 0.00 0.00 0.00 4.02
8003 9843 4.467082 TGCTGTTTAATACTCCCTCCGTAA 59.533 41.667 0.00 0.00 0.00 3.18
8004 9844 5.046448 TGCTGTTTAATACTCCCTCCGTAAA 60.046 40.000 0.00 0.00 0.00 2.01
8005 9845 5.522824 GCTGTTTAATACTCCCTCCGTAAAG 59.477 44.000 0.00 0.00 0.00 1.85
8006 9846 6.628844 GCTGTTTAATACTCCCTCCGTAAAGA 60.629 42.308 0.00 0.00 0.00 2.52
8007 9847 7.243604 TGTTTAATACTCCCTCCGTAAAGAA 57.756 36.000 0.00 0.00 0.00 2.52
8008 9848 7.678837 TGTTTAATACTCCCTCCGTAAAGAAA 58.321 34.615 0.00 0.00 0.00 2.52
8009 9849 8.323567 TGTTTAATACTCCCTCCGTAAAGAAAT 58.676 33.333 0.00 0.00 0.00 2.17
8010 9850 9.822185 GTTTAATACTCCCTCCGTAAAGAAATA 57.178 33.333 0.00 0.00 0.00 1.40
8015 9855 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
8016 9856 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
8017 9857 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
8018 9858 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
8019 9859 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
8020 9860 6.362820 CCTCCGTAAAGAAATATAAGAGCGTC 59.637 42.308 0.00 0.00 0.00 5.19
8021 9861 7.035840 TCCGTAAAGAAATATAAGAGCGTCT 57.964 36.000 0.00 0.00 0.00 4.18
8022 9862 8.158169 TCCGTAAAGAAATATAAGAGCGTCTA 57.842 34.615 0.00 0.00 0.00 2.59
8023 9863 8.288208 TCCGTAAAGAAATATAAGAGCGTCTAG 58.712 37.037 0.00 0.00 0.00 2.43
8024 9864 8.288208 CCGTAAAGAAATATAAGAGCGTCTAGA 58.712 37.037 0.00 0.00 0.00 2.43
8025 9865 9.828852 CGTAAAGAAATATAAGAGCGTCTAGAT 57.171 33.333 0.00 0.00 0.00 1.98
8028 9868 9.685828 AAAGAAATATAAGAGCGTCTAGATCAC 57.314 33.333 0.00 0.00 37.82 3.06
8029 9869 8.630054 AGAAATATAAGAGCGTCTAGATCACT 57.370 34.615 0.00 0.00 37.82 3.41
8030 9870 9.727859 AGAAATATAAGAGCGTCTAGATCACTA 57.272 33.333 0.00 0.00 37.82 2.74
8031 9871 9.763465 GAAATATAAGAGCGTCTAGATCACTAC 57.237 37.037 0.00 0.00 37.82 2.73
8032 9872 9.509956 AAATATAAGAGCGTCTAGATCACTACT 57.490 33.333 0.00 0.00 37.82 2.57
8034 9874 9.811995 ATATAAGAGCGTCTAGATCACTACTAG 57.188 37.037 0.00 0.00 37.82 2.57
8035 9875 5.540400 AGAGCGTCTAGATCACTACTAGT 57.460 43.478 0.00 0.00 37.82 2.57
8036 9876 6.653526 AGAGCGTCTAGATCACTACTAGTA 57.346 41.667 1.89 1.89 37.82 1.82
8037 9877 7.053316 AGAGCGTCTAGATCACTACTAGTAA 57.947 40.000 3.76 0.00 37.82 2.24
8038 9878 7.673180 AGAGCGTCTAGATCACTACTAGTAAT 58.327 38.462 3.76 0.00 37.82 1.89
8039 9879 7.816031 AGAGCGTCTAGATCACTACTAGTAATC 59.184 40.741 3.76 4.66 37.82 1.75
8040 9880 7.673180 AGCGTCTAGATCACTACTAGTAATCT 58.327 38.462 16.23 16.23 38.59 2.40
8041 9881 8.805175 AGCGTCTAGATCACTACTAGTAATCTA 58.195 37.037 16.60 16.60 38.59 1.98
8042 9882 9.421806 GCGTCTAGATCACTACTAGTAATCTAA 57.578 37.037 17.55 10.10 38.59 2.10
8074 9914 9.716556 ACTCTCTTATATTTCTTTACTGAGGGA 57.283 33.333 0.00 0.00 0.00 4.20
8076 9916 9.716556 TCTCTTATATTTCTTTACTGAGGGAGT 57.283 33.333 0.00 0.00 38.88 3.85
8082 9922 9.939424 ATATTTCTTTACTGAGGGAGTAGTACT 57.061 33.333 1.37 1.37 38.45 2.73
8103 9943 4.005650 CTGTAGAACGTACACCACCTCTA 58.994 47.826 0.00 0.00 0.00 2.43
8116 9956 3.099905 CCACCTCTAGGACATCAACAGA 58.900 50.000 2.23 0.00 38.94 3.41
8220 10060 8.273780 TCTTTACCACTACTGCTACTTAGTAC 57.726 38.462 0.00 0.00 0.00 2.73
8221 10061 8.105829 TCTTTACCACTACTGCTACTTAGTACT 58.894 37.037 0.00 0.00 0.00 2.73
8222 10062 7.856145 TTACCACTACTGCTACTTAGTACTC 57.144 40.000 0.00 0.00 0.00 2.59
8223 10063 5.192176 ACCACTACTGCTACTTAGTACTCC 58.808 45.833 0.00 0.00 0.00 3.85
8224 10064 4.579753 CCACTACTGCTACTTAGTACTCCC 59.420 50.000 0.00 0.00 0.00 4.30
8225 10065 5.438833 CACTACTGCTACTTAGTACTCCCT 58.561 45.833 0.00 0.00 0.00 4.20
8226 10066 5.528320 CACTACTGCTACTTAGTACTCCCTC 59.472 48.000 0.00 0.00 0.00 4.30
8227 10067 3.900971 ACTGCTACTTAGTACTCCCTCC 58.099 50.000 0.00 0.00 0.00 4.30
8228 10068 2.879646 CTGCTACTTAGTACTCCCTCCG 59.120 54.545 0.00 0.00 0.00 4.63
8229 10069 2.240667 TGCTACTTAGTACTCCCTCCGT 59.759 50.000 0.00 0.00 0.00 4.69
8230 10070 2.877786 GCTACTTAGTACTCCCTCCGTC 59.122 54.545 0.00 0.00 0.00 4.79
8231 10071 2.433662 ACTTAGTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
8232 10072 1.307097 CTTAGTACTCCCTCCGTCCG 58.693 60.000 0.00 0.00 0.00 4.79
8233 10073 0.107017 TTAGTACTCCCTCCGTCCGG 60.107 60.000 0.00 0.00 0.00 5.14
8234 10074 0.982852 TAGTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
8235 10075 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
8236 10076 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
8237 10077 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
8238 10078 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
8239 10079 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
8240 10080 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
8241 10081 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
8242 10082 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
8243 10083 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
8244 10084 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
8245 10085 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
8246 10086 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
8247 10087 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
8248 10088 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
8249 10089 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
8250 10090 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
8251 10091 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
8252 10092 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
8253 10093 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
8254 10094 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
8255 10095 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
8256 10096 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
8257 10097 8.800972 CGGAAATACTTGTCATCAAAATGAATG 58.199 33.333 0.00 0.00 43.42 2.67
8258 10098 9.090692 GGAAATACTTGTCATCAAAATGAATGG 57.909 33.333 0.00 0.00 43.42 3.16
8259 10099 9.859427 GAAATACTTGTCATCAAAATGAATGGA 57.141 29.630 0.00 0.00 43.42 3.41
8261 10101 9.865321 AATACTTGTCATCAAAATGAATGGAAG 57.135 29.630 0.00 0.00 43.42 3.46
8262 10102 6.694447 ACTTGTCATCAAAATGAATGGAAGG 58.306 36.000 0.00 0.00 43.42 3.46
8263 10103 5.664294 TGTCATCAAAATGAATGGAAGGG 57.336 39.130 0.00 0.00 43.42 3.95
8264 10104 4.467082 TGTCATCAAAATGAATGGAAGGGG 59.533 41.667 0.00 0.00 43.42 4.79
8265 10105 4.711355 GTCATCAAAATGAATGGAAGGGGA 59.289 41.667 0.00 0.00 43.42 4.81
8266 10106 5.364735 GTCATCAAAATGAATGGAAGGGGAT 59.635 40.000 0.00 0.00 43.42 3.85
8267 10107 5.364446 TCATCAAAATGAATGGAAGGGGATG 59.636 40.000 0.00 0.00 38.97 3.51
8268 10108 4.686891 TCAAAATGAATGGAAGGGGATGT 58.313 39.130 0.00 0.00 0.00 3.06
8269 10109 5.836705 TCAAAATGAATGGAAGGGGATGTA 58.163 37.500 0.00 0.00 0.00 2.29
8270 10110 6.442961 TCAAAATGAATGGAAGGGGATGTAT 58.557 36.000 0.00 0.00 0.00 2.29
8271 10111 6.324512 TCAAAATGAATGGAAGGGGATGTATG 59.675 38.462 0.00 0.00 0.00 2.39
8272 10112 5.408079 AATGAATGGAAGGGGATGTATGT 57.592 39.130 0.00 0.00 0.00 2.29
8273 10113 6.529084 AATGAATGGAAGGGGATGTATGTA 57.471 37.500 0.00 0.00 0.00 2.29
8274 10114 5.567037 TGAATGGAAGGGGATGTATGTAG 57.433 43.478 0.00 0.00 0.00 2.74
8275 10115 5.223655 TGAATGGAAGGGGATGTATGTAGA 58.776 41.667 0.00 0.00 0.00 2.59
8276 10116 5.851693 TGAATGGAAGGGGATGTATGTAGAT 59.148 40.000 0.00 0.00 0.00 1.98
8277 10117 5.768980 ATGGAAGGGGATGTATGTAGATG 57.231 43.478 0.00 0.00 0.00 2.90
8278 10118 4.566837 TGGAAGGGGATGTATGTAGATGT 58.433 43.478 0.00 0.00 0.00 3.06
8279 10119 5.722290 TGGAAGGGGATGTATGTAGATGTA 58.278 41.667 0.00 0.00 0.00 2.29
8280 10120 6.331032 TGGAAGGGGATGTATGTAGATGTAT 58.669 40.000 0.00 0.00 0.00 2.29
8281 10121 6.792473 TGGAAGGGGATGTATGTAGATGTATT 59.208 38.462 0.00 0.00 0.00 1.89
8282 10122 7.294720 TGGAAGGGGATGTATGTAGATGTATTT 59.705 37.037 0.00 0.00 0.00 1.40
8283 10123 8.164070 GGAAGGGGATGTATGTAGATGTATTTT 58.836 37.037 0.00 0.00 0.00 1.82
8286 10126 9.393786 AGGGGATGTATGTAGATGTATTTTAGT 57.606 33.333 0.00 0.00 0.00 2.24
8309 10149 8.349568 AGTTTTAGATACATCCCTTTTTGACC 57.650 34.615 0.00 0.00 0.00 4.02
8310 10150 7.947890 AGTTTTAGATACATCCCTTTTTGACCA 59.052 33.333 0.00 0.00 0.00 4.02
8311 10151 8.749354 GTTTTAGATACATCCCTTTTTGACCAT 58.251 33.333 0.00 0.00 0.00 3.55
8312 10152 8.893563 TTTAGATACATCCCTTTTTGACCATT 57.106 30.769 0.00 0.00 0.00 3.16
8313 10153 8.893563 TTAGATACATCCCTTTTTGACCATTT 57.106 30.769 0.00 0.00 0.00 2.32
8314 10154 7.797121 AGATACATCCCTTTTTGACCATTTT 57.203 32.000 0.00 0.00 0.00 1.82
8315 10155 7.614494 AGATACATCCCTTTTTGACCATTTTG 58.386 34.615 0.00 0.00 0.00 2.44
8316 10156 5.885449 ACATCCCTTTTTGACCATTTTGA 57.115 34.783 0.00 0.00 0.00 2.69
8317 10157 6.438186 ACATCCCTTTTTGACCATTTTGAT 57.562 33.333 0.00 0.00 0.00 2.57
8318 10158 6.232692 ACATCCCTTTTTGACCATTTTGATG 58.767 36.000 0.00 0.00 33.80 3.07
8319 10159 6.043012 ACATCCCTTTTTGACCATTTTGATGA 59.957 34.615 0.00 0.00 32.39 2.92
8320 10160 5.852827 TCCCTTTTTGACCATTTTGATGAC 58.147 37.500 0.00 0.00 0.00 3.06
8321 10161 5.365025 TCCCTTTTTGACCATTTTGATGACA 59.635 36.000 0.00 0.00 0.00 3.58
8322 10162 6.054295 CCCTTTTTGACCATTTTGATGACAA 58.946 36.000 0.00 0.00 0.00 3.18
8323 10163 6.203338 CCCTTTTTGACCATTTTGATGACAAG 59.797 38.462 0.00 0.00 37.32 3.16
8324 10164 6.762661 CCTTTTTGACCATTTTGATGACAAGT 59.237 34.615 0.00 0.00 37.32 3.16
8325 10165 7.925483 CCTTTTTGACCATTTTGATGACAAGTA 59.075 33.333 0.00 0.00 37.32 2.24
8326 10166 9.480053 CTTTTTGACCATTTTGATGACAAGTAT 57.520 29.630 0.00 0.00 37.32 2.12
8327 10167 9.829507 TTTTTGACCATTTTGATGACAAGTATT 57.170 25.926 0.00 0.00 37.32 1.89
8328 10168 9.829507 TTTTGACCATTTTGATGACAAGTATTT 57.170 25.926 0.00 0.00 37.32 1.40
8329 10169 9.829507 TTTGACCATTTTGATGACAAGTATTTT 57.170 25.926 0.00 0.00 37.32 1.82
8330 10170 9.474920 TTGACCATTTTGATGACAAGTATTTTC 57.525 29.630 0.00 0.00 37.32 2.29
8331 10171 7.807433 TGACCATTTTGATGACAAGTATTTTCG 59.193 33.333 0.00 0.00 37.32 3.46
8332 10172 7.090173 ACCATTTTGATGACAAGTATTTTCGG 58.910 34.615 0.00 0.00 37.32 4.30
8333 10173 7.040062 ACCATTTTGATGACAAGTATTTTCGGA 60.040 33.333 0.00 0.00 37.32 4.55
8334 10174 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
8335 10175 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
8336 10176 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
8337 10177 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
8338 10178 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
8339 10179 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
8340 10180 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
8341 10181 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
8342 10182 2.181975 AGTATTTTCGGACGGAGGGAA 58.818 47.619 0.00 0.00 0.00 3.97
8389 10229 1.202855 AGTTCAGCATGCCAACTGACT 60.203 47.619 24.83 13.90 42.42 3.41
8408 10248 4.593206 TGACTGAAGGTCTGTAGGTTGAAT 59.407 41.667 0.00 0.00 44.74 2.57
8418 10258 3.071479 TGTAGGTTGAATCGAAACTGGC 58.929 45.455 0.00 0.00 0.00 4.85
8435 10275 0.460987 GGCAGTCCTGTGAGAATCCG 60.461 60.000 0.00 0.00 0.00 4.18
8468 10308 1.004320 TTGTACGGGATGCGTGCTT 60.004 52.632 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.862147 GTCCACGACGACGACGATG 60.862 63.158 25.15 17.69 42.66 3.84
10 11 2.477845 GTCCACGACGACGACGAT 59.522 61.111 25.15 7.72 42.66 3.73
66 67 4.115199 CCTTCTTCCCGGCCCAGG 62.115 72.222 0.00 0.00 0.00 4.45
71 72 1.098129 GCAATCTCCTTCTTCCCGGC 61.098 60.000 0.00 0.00 0.00 6.13
294 295 4.400961 GGAACAGCCGGAGCAGCT 62.401 66.667 5.05 0.00 43.56 4.24
409 410 1.527611 TTGTTGCTGCTGCTGCTCT 60.528 52.632 27.67 0.00 40.48 4.09
424 428 2.753029 GCCTCCTCCTGCTGTTGT 59.247 61.111 0.00 0.00 0.00 3.32
562 566 2.030562 CCTGGCGTCGTCCACTTT 59.969 61.111 4.55 0.00 31.74 2.66
606 613 2.615493 CCACCACACATTCTACAGGGTC 60.615 54.545 0.00 0.00 0.00 4.46
713 720 0.597637 CCAGTCGCAGTTGAACGTCT 60.598 55.000 0.00 0.00 0.00 4.18
770 777 7.791590 CGTACTACTAGCACGAGAACTAATTAC 59.208 40.741 3.07 0.00 37.16 1.89
771 778 7.492669 ACGTACTACTAGCACGAGAACTAATTA 59.507 37.037 14.52 0.00 37.16 1.40
772 779 6.314896 ACGTACTACTAGCACGAGAACTAATT 59.685 38.462 14.52 0.00 37.16 1.40
773 780 5.814705 ACGTACTACTAGCACGAGAACTAAT 59.185 40.000 14.52 0.00 37.16 1.73
776 783 3.594134 ACGTACTACTAGCACGAGAACT 58.406 45.455 14.52 0.00 37.16 3.01
777 784 4.564769 AGTACGTACTACTAGCACGAGAAC 59.435 45.833 26.36 9.56 37.16 3.01
778 785 4.748892 AGTACGTACTACTAGCACGAGAA 58.251 43.478 26.36 0.00 37.16 2.87
780 787 3.489047 GGAGTACGTACTACTAGCACGAG 59.511 52.174 27.45 0.00 37.16 4.18
781 788 3.131223 AGGAGTACGTACTACTAGCACGA 59.869 47.826 34.24 0.00 45.47 4.35
787 794 4.278669 CGGGAGTAGGAGTACGTACTACTA 59.721 50.000 34.20 34.20 45.47 1.82
789 796 3.068307 TCGGGAGTAGGAGTACGTACTAC 59.932 52.174 27.48 27.48 44.32 2.73
790 797 3.296854 TCGGGAGTAGGAGTACGTACTA 58.703 50.000 27.44 10.38 44.32 1.82
792 799 2.604046 TCGGGAGTAGGAGTACGTAC 57.396 55.000 18.10 18.10 37.56 3.67
794 801 2.087646 GTTTCGGGAGTAGGAGTACGT 58.912 52.381 0.00 0.00 33.97 3.57
795 802 2.086869 TGTTTCGGGAGTAGGAGTACG 58.913 52.381 0.00 0.00 33.97 3.67
796 803 2.159268 GCTGTTTCGGGAGTAGGAGTAC 60.159 54.545 0.00 0.00 0.00 2.73
797 804 2.097825 GCTGTTTCGGGAGTAGGAGTA 58.902 52.381 0.00 0.00 0.00 2.59
798 805 0.896226 GCTGTTTCGGGAGTAGGAGT 59.104 55.000 0.00 0.00 0.00 3.85
799 806 0.175989 GGCTGTTTCGGGAGTAGGAG 59.824 60.000 0.00 0.00 0.00 3.69
800 807 1.601419 CGGCTGTTTCGGGAGTAGGA 61.601 60.000 0.00 0.00 0.00 2.94
801 808 1.153628 CGGCTGTTTCGGGAGTAGG 60.154 63.158 0.00 0.00 0.00 3.18
802 809 0.460311 ATCGGCTGTTTCGGGAGTAG 59.540 55.000 0.00 0.00 0.00 2.57
803 810 0.174845 CATCGGCTGTTTCGGGAGTA 59.825 55.000 0.00 0.00 0.00 2.59
843 2502 2.433318 GCCACGACACCTGCTCTC 60.433 66.667 0.00 0.00 0.00 3.20
852 2511 1.298340 CCCTGGTTATGCCACGACA 59.702 57.895 0.00 0.00 43.61 4.35
912 2571 0.107456 CCGCGGAGTAGTAGGTAGGA 59.893 60.000 24.07 0.00 0.00 2.94
913 2572 1.513836 GCCGCGGAGTAGTAGGTAGG 61.514 65.000 33.48 0.00 0.00 3.18
970 2631 1.290134 GTTTGGATGGGGAGAGGAGT 58.710 55.000 0.00 0.00 0.00 3.85
1024 2685 1.002792 AGCAGGAGGAAGAGGAGGG 59.997 63.158 0.00 0.00 0.00 4.30
1032 2693 2.119611 TGGGACGAGCAGGAGGAA 59.880 61.111 0.00 0.00 0.00 3.36
1033 2694 2.680352 GTGGGACGAGCAGGAGGA 60.680 66.667 0.00 0.00 0.00 3.71
1034 2695 4.135153 CGTGGGACGAGCAGGAGG 62.135 72.222 0.00 0.00 46.05 4.30
1035 2696 4.803426 GCGTGGGACGAGCAGGAG 62.803 72.222 0.00 0.00 46.05 3.69
1037 2698 4.803426 GAGCGTGGGACGAGCAGG 62.803 72.222 0.00 0.00 46.05 4.85
1219 2904 3.550030 CCAACCATTCCGTCAAACACTTC 60.550 47.826 0.00 0.00 0.00 3.01
1221 2906 1.953686 CCAACCATTCCGTCAAACACT 59.046 47.619 0.00 0.00 0.00 3.55
1239 2924 2.842462 AGACCACTGCACGGACCA 60.842 61.111 4.39 0.00 0.00 4.02
1254 2939 4.111016 CTGTACGCCGCCACGAGA 62.111 66.667 0.00 0.00 36.70 4.04
1403 3088 4.574828 ACAGCACCACAAGTTAGTTAACAG 59.425 41.667 8.61 0.19 38.62 3.16
1421 3106 4.284860 AGACAGCGACGCACAGCA 62.285 61.111 23.70 0.00 35.48 4.41
1423 3108 2.085262 CAGAGACAGCGACGCACAG 61.085 63.158 23.70 13.67 0.00 3.66
1429 3114 0.173481 TGGCATACAGAGACAGCGAC 59.827 55.000 0.00 0.00 0.00 5.19
1487 3184 1.795768 TTGCGACAAGGAGCACTAAG 58.204 50.000 0.00 0.00 43.69 2.18
1544 3241 3.405831 CATCAAGAGAGACCAACAGCAA 58.594 45.455 0.00 0.00 0.00 3.91
1587 3286 8.579863 AGGTTCCATTTCAGTTTTGAATTCTAG 58.420 33.333 7.05 0.00 42.60 2.43
1644 3345 2.476619 CACTTTCTGTCTGCAGGTAACG 59.523 50.000 15.13 3.87 42.78 3.18
1741 3442 9.950680 AGAATGCAAACATAACTAATTATTCGG 57.049 29.630 0.00 0.00 34.62 4.30
1787 3490 9.574516 ACTTATAAGGTAATTCATTGATGGGAC 57.425 33.333 16.73 0.00 0.00 4.46
1820 3523 1.351017 TGGGAGTTAGGCTGAAACAGG 59.649 52.381 0.00 0.00 31.21 4.00
1863 3566 2.749044 CAGTGCTGGCGCTCCATT 60.749 61.111 7.64 0.00 42.51 3.16
1966 3671 3.752665 CAATGGGATCTGAAGGGATCTG 58.247 50.000 0.00 0.00 41.15 2.90
2059 3764 5.046950 TGTGCCATGTAACATGTACTGTAGA 60.047 40.000 0.00 0.00 36.98 2.59
2142 3847 9.853555 AGCAATCGATAAAATGTTTGTATTTGA 57.146 25.926 0.00 0.00 31.05 2.69
2174 3879 2.035449 GTCATCATCATGGTGGGCATTG 59.965 50.000 6.03 0.00 0.00 2.82
2176 3881 1.479942 GGTCATCATCATGGTGGGCAT 60.480 52.381 6.03 0.00 0.00 4.40
2184 3894 5.181433 CCAGCTAATTCAGGTCATCATCATG 59.819 44.000 0.00 0.00 30.72 3.07
2186 3896 4.164796 ACCAGCTAATTCAGGTCATCATCA 59.835 41.667 0.00 0.00 30.72 3.07
2187 3897 4.712476 ACCAGCTAATTCAGGTCATCATC 58.288 43.478 0.00 0.00 30.72 2.92
2188 3898 4.785346 ACCAGCTAATTCAGGTCATCAT 57.215 40.909 0.00 0.00 30.72 2.45
2189 3899 4.574674 AACCAGCTAATTCAGGTCATCA 57.425 40.909 0.00 0.00 32.05 3.07
2190 3900 4.943705 TGAAACCAGCTAATTCAGGTCATC 59.056 41.667 4.42 2.14 32.05 2.92
2275 3985 6.323739 TGAACTGCAAGGGTAAGAAAGAATTT 59.676 34.615 0.00 0.00 39.29 1.82
2657 4373 6.659824 TGTAAGGAAAGAACTCACCTCTTTT 58.340 36.000 0.00 0.00 41.96 2.27
2824 4540 9.653067 CAGTAGTAACTTACAGATAATGACTCG 57.347 37.037 1.79 0.00 31.97 4.18
2937 4656 5.472137 GCCAGACAGTTAATTAACAAGGTGA 59.528 40.000 26.06 0.00 38.62 4.02
3203 4924 8.103948 AGGACATCTTCACTTGTAGAATTTTG 57.896 34.615 0.00 0.00 0.00 2.44
3291 5020 5.902681 AGTCCAACAGGTAAAAAGAAAAGC 58.097 37.500 0.00 0.00 0.00 3.51
3292 5021 6.978659 GGAAGTCCAACAGGTAAAAAGAAAAG 59.021 38.462 0.00 0.00 35.64 2.27
3303 5044 3.884037 ATTCAAGGAAGTCCAACAGGT 57.116 42.857 0.00 0.00 38.89 4.00
3582 5329 5.497464 TCGGGAAGATGCATATTATTGGA 57.503 39.130 6.54 0.00 0.00 3.53
3648 5395 3.987404 GATGCATACCATCGGGCC 58.013 61.111 0.00 0.00 40.84 5.80
3657 5404 7.760794 TGGATTGATGTTCAAAAAGATGCATAC 59.239 33.333 0.00 0.00 40.12 2.39
4028 5782 3.168035 ACCTGCATACCACCATGAAAA 57.832 42.857 0.00 0.00 0.00 2.29
4108 5864 3.453353 AGTTAATAGGGCACATACACGGT 59.547 43.478 0.00 0.00 0.00 4.83
4112 5868 5.606749 AGATGGAGTTAATAGGGCACATACA 59.393 40.000 0.00 0.00 0.00 2.29
4309 6072 2.423926 ATGGATCGCTAAGCTGTACG 57.576 50.000 0.00 0.00 0.00 3.67
4348 6111 4.022935 CCAAGTCAATACAGAAAGCAGCAA 60.023 41.667 0.00 0.00 0.00 3.91
4354 6117 5.009010 ACTTGTGCCAAGTCAATACAGAAAG 59.991 40.000 12.98 0.00 0.00 2.62
4522 6285 5.336372 GCAACTATTTTGTGATGTTAGCCCA 60.336 40.000 0.00 0.00 0.00 5.36
4525 6288 6.254157 CCATGCAACTATTTTGTGATGTTAGC 59.746 38.462 0.00 0.00 0.00 3.09
4599 6362 4.219944 GCAATCCACATATACGTCCCTCTA 59.780 45.833 0.00 0.00 0.00 2.43
4600 6363 3.006967 GCAATCCACATATACGTCCCTCT 59.993 47.826 0.00 0.00 0.00 3.69
4601 6364 3.326747 GCAATCCACATATACGTCCCTC 58.673 50.000 0.00 0.00 0.00 4.30
4604 6367 2.224426 TGGGCAATCCACATATACGTCC 60.224 50.000 0.00 0.00 41.46 4.79
4756 6528 0.608640 AGGCCTAAACGTGGACAGAG 59.391 55.000 1.29 0.00 34.31 3.35
4924 6699 3.308323 GCAAAGCATCTACTAGTGTCTGC 59.692 47.826 5.39 11.01 0.00 4.26
4942 6717 1.214175 TCTCCAACCTCCTTGTGCAAA 59.786 47.619 0.00 0.00 0.00 3.68
4943 6718 0.843309 TCTCCAACCTCCTTGTGCAA 59.157 50.000 0.00 0.00 0.00 4.08
4945 6720 3.350219 TTATCTCCAACCTCCTTGTGC 57.650 47.619 0.00 0.00 0.00 4.57
4954 6729 7.420800 CAAGCTTCACATTATTATCTCCAACC 58.579 38.462 0.00 0.00 0.00 3.77
4965 6740 6.017400 CTTGTGTTCCAAGCTTCACATTAT 57.983 37.500 16.68 0.00 43.84 1.28
5008 6783 3.126073 TGATGCAGATAGTTCATCGCAC 58.874 45.455 0.00 0.00 42.08 5.34
5067 6842 4.695928 GGTTCTTTGCAAGTCCCTTACTAG 59.304 45.833 0.00 0.00 37.50 2.57
5076 6851 2.576615 AGGACTGGTTCTTTGCAAGTC 58.423 47.619 0.00 1.22 37.20 3.01
5077 6852 2.736670 AGGACTGGTTCTTTGCAAGT 57.263 45.000 0.00 0.00 0.00 3.16
5222 6997 8.374743 TCAATAGTTATAATAGCCAGTCATGCA 58.625 33.333 0.00 0.00 0.00 3.96
5341 7116 0.460987 CTAGCACAAAGGGAGCTCCG 60.461 60.000 26.36 14.89 41.52 4.63
5419 7194 7.116805 CCAATTTCTTTACAAGAGCAACCATTC 59.883 37.037 0.00 0.00 39.03 2.67
5539 7334 3.187700 GTTCTGGCACGTGGATAGTTAG 58.812 50.000 18.88 0.00 0.00 2.34
5542 7337 0.249398 GGTTCTGGCACGTGGATAGT 59.751 55.000 18.88 0.00 0.00 2.12
5672 7467 4.265556 GTGACAAGGTACGAGAATGAATCG 59.734 45.833 0.00 0.00 45.54 3.34
5682 7477 1.887854 TCCATTCGTGACAAGGTACGA 59.112 47.619 0.00 0.00 46.31 3.43
5732 7527 1.571919 CCGCCTTCTGAAATAGACCG 58.428 55.000 0.00 0.00 34.43 4.79
5773 7568 9.210329 TCGTAGAGTTACTTTTTCATGCATTAA 57.790 29.630 0.00 0.00 0.00 1.40
5774 7569 8.766000 TCGTAGAGTTACTTTTTCATGCATTA 57.234 30.769 0.00 0.00 0.00 1.90
5775 7570 7.667043 TCGTAGAGTTACTTTTTCATGCATT 57.333 32.000 0.00 0.00 0.00 3.56
5797 7592 9.175060 CATATCACTGATCTACTACTGTTTTCG 57.825 37.037 0.00 0.00 0.00 3.46
5940 7736 4.832248 TCATGGCAGTAAAACAGAGTAGG 58.168 43.478 0.00 0.00 0.00 3.18
6006 7802 3.690460 TCAGGAAGCAAGGAATCCTTTC 58.310 45.455 12.63 7.80 41.69 2.62
6075 7871 6.054860 ACTGGTACAACAGAGCATCTTAAT 57.945 37.500 0.24 0.00 40.80 1.40
6133 7930 7.512130 AGTGATTTGATCTCCAAGTGCATATA 58.488 34.615 0.00 0.00 35.94 0.86
6158 7955 6.568462 GCTCTAACAACACTTACTACGGTGTA 60.568 42.308 0.00 0.00 44.54 2.90
6167 7964 5.051891 TCGTAGGCTCTAACAACACTTAC 57.948 43.478 0.00 0.00 0.00 2.34
6208 8005 6.534059 AGAACGAAACATCGTCATAAATGTG 58.466 36.000 4.19 0.00 46.41 3.21
6636 8473 7.060421 AGGAGAAGAGAGTTCCTATACAAGAG 58.940 42.308 0.00 0.00 39.51 2.85
6708 8545 1.114627 GGCTTCCCCCAATGAATGTC 58.885 55.000 0.00 0.00 0.00 3.06
6746 8583 3.982576 AAGGTTTTTACGTTGGAGCAG 57.017 42.857 0.00 0.00 0.00 4.24
6747 8584 4.158025 TCAAAAGGTTTTTACGTTGGAGCA 59.842 37.500 0.00 0.00 0.00 4.26
6772 8609 9.189156 TGCTTAAGAAAAGGAGCATAATACAAT 57.811 29.630 6.67 0.00 39.97 2.71
6785 8622 9.657419 AATTGGAATAATGTGCTTAAGAAAAGG 57.343 29.630 6.67 0.00 0.00 3.11
6813 8650 3.073946 AGGTAGCCCTGCAGAAGTAAAAA 59.926 43.478 17.39 0.00 40.58 1.94
6814 8651 2.642807 AGGTAGCCCTGCAGAAGTAAAA 59.357 45.455 17.39 0.00 40.58 1.52
6833 8670 6.418819 GTCAGATGTCACAAATTGTTTCAAGG 59.581 38.462 0.00 0.00 0.00 3.61
7066 8903 3.195396 TGGCCATACAAAGGAAAAGCATC 59.805 43.478 0.00 0.00 0.00 3.91
7264 9101 4.489679 AATTTCCGACAAGACTGCTTTC 57.510 40.909 0.00 0.00 30.14 2.62
7268 9105 3.626028 ACAAATTTCCGACAAGACTGC 57.374 42.857 0.00 0.00 0.00 4.40
7296 9133 6.184789 GGTGGGATTACTATTTCTGGTTTGA 58.815 40.000 0.00 0.00 0.00 2.69
7473 9310 7.012515 AGGTCAGACACTGTCGATATTAACTAG 59.987 40.741 2.17 0.00 37.67 2.57
7488 9325 4.861196 TGCTAGAAGATAGGTCAGACACT 58.139 43.478 2.17 0.00 0.00 3.55
7542 9379 5.621329 GCCAACCACTGCTATCGTTTTAAAT 60.621 40.000 0.00 0.00 0.00 1.40
7543 9380 4.320641 GCCAACCACTGCTATCGTTTTAAA 60.321 41.667 0.00 0.00 0.00 1.52
7544 9381 3.189702 GCCAACCACTGCTATCGTTTTAA 59.810 43.478 0.00 0.00 0.00 1.52
7545 9382 2.745281 GCCAACCACTGCTATCGTTTTA 59.255 45.455 0.00 0.00 0.00 1.52
7546 9383 1.539827 GCCAACCACTGCTATCGTTTT 59.460 47.619 0.00 0.00 0.00 2.43
7547 9384 1.165270 GCCAACCACTGCTATCGTTT 58.835 50.000 0.00 0.00 0.00 3.60
7548 9385 0.036164 TGCCAACCACTGCTATCGTT 59.964 50.000 0.00 0.00 0.00 3.85
7549 9386 0.036164 TTGCCAACCACTGCTATCGT 59.964 50.000 0.00 0.00 0.00 3.73
7550 9387 1.331756 GATTGCCAACCACTGCTATCG 59.668 52.381 0.00 0.00 31.93 2.92
7551 9388 2.368439 TGATTGCCAACCACTGCTATC 58.632 47.619 0.00 0.00 39.26 2.08
7552 9389 2.512692 TGATTGCCAACCACTGCTAT 57.487 45.000 0.00 0.00 0.00 2.97
7553 9390 2.093890 CATGATTGCCAACCACTGCTA 58.906 47.619 0.00 0.00 0.00 3.49
7554 9391 0.892755 CATGATTGCCAACCACTGCT 59.107 50.000 0.00 0.00 0.00 4.24
7555 9392 0.604578 ACATGATTGCCAACCACTGC 59.395 50.000 0.00 0.00 0.00 4.40
7556 9393 3.758023 TCTAACATGATTGCCAACCACTG 59.242 43.478 0.00 0.00 0.00 3.66
7557 9394 4.032960 TCTAACATGATTGCCAACCACT 57.967 40.909 0.00 0.00 0.00 4.00
7558 9395 4.989279 ATCTAACATGATTGCCAACCAC 57.011 40.909 0.00 0.00 0.00 4.16
7559 9396 5.999205 AAATCTAACATGATTGCCAACCA 57.001 34.783 0.00 0.00 36.84 3.67
7560 9397 8.655970 GTTTTAAATCTAACATGATTGCCAACC 58.344 33.333 0.00 0.00 36.84 3.77
7561 9398 8.372521 CGTTTTAAATCTAACATGATTGCCAAC 58.627 33.333 0.00 0.00 36.84 3.77
7562 9399 8.300286 TCGTTTTAAATCTAACATGATTGCCAA 58.700 29.630 0.00 0.00 36.84 4.52
7563 9400 7.821652 TCGTTTTAAATCTAACATGATTGCCA 58.178 30.769 0.00 0.00 36.84 4.92
7564 9401 8.856490 ATCGTTTTAAATCTAACATGATTGCC 57.144 30.769 0.00 0.00 36.84 4.52
7569 9406 9.378551 ACTGCTATCGTTTTAAATCTAACATGA 57.621 29.630 0.00 0.00 0.00 3.07
7570 9407 9.425893 CACTGCTATCGTTTTAAATCTAACATG 57.574 33.333 0.00 0.00 0.00 3.21
7571 9408 8.612619 CCACTGCTATCGTTTTAAATCTAACAT 58.387 33.333 0.00 0.00 0.00 2.71
7572 9409 7.604927 ACCACTGCTATCGTTTTAAATCTAACA 59.395 33.333 0.00 0.00 0.00 2.41
7573 9410 7.971455 ACCACTGCTATCGTTTTAAATCTAAC 58.029 34.615 0.00 0.00 0.00 2.34
7574 9411 8.447833 CAACCACTGCTATCGTTTTAAATCTAA 58.552 33.333 0.00 0.00 0.00 2.10
7575 9412 7.065324 CCAACCACTGCTATCGTTTTAAATCTA 59.935 37.037 0.00 0.00 0.00 1.98
7576 9413 6.128007 CCAACCACTGCTATCGTTTTAAATCT 60.128 38.462 0.00 0.00 0.00 2.40
7577 9414 6.027749 CCAACCACTGCTATCGTTTTAAATC 58.972 40.000 0.00 0.00 0.00 2.17
7586 9423 1.331756 GATTGCCAACCACTGCTATCG 59.668 52.381 0.00 0.00 31.93 2.92
7618 9455 3.953612 CTGGATGCCTGGTTAATGCTTAA 59.046 43.478 0.00 0.00 0.00 1.85
7693 9530 0.180406 ACCAAGAACAGTTCAGGCGT 59.820 50.000 19.53 6.99 32.37 5.68
7702 9539 2.423185 TGTGCAGAACAACCAAGAACAG 59.577 45.455 0.00 0.00 35.24 3.16
7717 9554 7.734924 ATATATGTCAATGGTTACTGTGCAG 57.265 36.000 0.00 0.00 0.00 4.41
7720 9557 9.208022 CAGGTATATATGTCAATGGTTACTGTG 57.792 37.037 0.00 0.00 0.00 3.66
7794 9632 2.559440 GAGGCTAATCCAACTGCTCAG 58.441 52.381 0.00 0.00 37.29 3.35
7798 9636 0.255890 TGGGAGGCTAATCCAACTGC 59.744 55.000 1.80 0.00 41.52 4.40
7827 9665 3.493176 GCACAAAGAAAACCCTTGAGCAT 60.493 43.478 0.00 0.00 0.00 3.79
7833 9671 3.096092 TGTGAGCACAAAGAAAACCCTT 58.904 40.909 0.00 0.00 38.56 3.95
7863 9701 2.552315 CGTGCAAGGAACATTGTAACCT 59.448 45.455 8.92 8.92 32.56 3.50
7864 9702 2.351350 CCGTGCAAGGAACATTGTAACC 60.351 50.000 14.14 5.21 32.56 2.85
7871 9709 0.179032 TGTGACCGTGCAAGGAACAT 60.179 50.000 26.25 1.87 34.73 2.71
7875 9715 1.227527 CTGTGTGACCGTGCAAGGA 60.228 57.895 26.25 0.00 34.73 3.36
7876 9716 2.253758 CCTGTGTGACCGTGCAAGG 61.254 63.158 17.83 17.83 37.30 3.61
7879 9719 3.475494 ACCCTGTGTGACCGTGCA 61.475 61.111 0.00 0.00 0.00 4.57
7888 9728 2.872388 CGTGAGAGGCACCCTGTGT 61.872 63.158 0.00 0.00 44.85 3.72
7889 9729 2.047844 CGTGAGAGGCACCCTGTG 60.048 66.667 0.00 0.00 44.85 3.66
7890 9730 4.008933 GCGTGAGAGGCACCCTGT 62.009 66.667 0.00 0.00 44.85 4.00
7891 9731 3.655810 GAGCGTGAGAGGCACCCTG 62.656 68.421 0.00 0.00 44.85 4.45
7892 9732 3.386237 GAGCGTGAGAGGCACCCT 61.386 66.667 0.00 0.00 44.85 4.34
7893 9733 4.459089 GGAGCGTGAGAGGCACCC 62.459 72.222 0.00 0.00 44.85 4.61
7894 9734 4.803426 CGGAGCGTGAGAGGCACC 62.803 72.222 0.00 0.00 44.85 5.01
7895 9735 3.282745 TTCGGAGCGTGAGAGGCAC 62.283 63.158 0.00 0.00 44.21 5.01
7896 9736 2.989253 TTCGGAGCGTGAGAGGCA 60.989 61.111 0.00 0.00 0.00 4.75
7897 9737 2.507324 GTTCGGAGCGTGAGAGGC 60.507 66.667 0.00 0.00 0.00 4.70
7898 9738 0.108615 ATTGTTCGGAGCGTGAGAGG 60.109 55.000 0.00 0.00 0.00 3.69
7899 9739 2.561733 TATTGTTCGGAGCGTGAGAG 57.438 50.000 0.00 0.00 0.00 3.20
7900 9740 2.602878 GTTATTGTTCGGAGCGTGAGA 58.397 47.619 0.00 0.00 0.00 3.27
7901 9741 1.320555 CGTTATTGTTCGGAGCGTGAG 59.679 52.381 0.00 0.00 0.00 3.51
7902 9742 1.068402 TCGTTATTGTTCGGAGCGTGA 60.068 47.619 0.00 0.00 0.00 4.35
7903 9743 1.342555 TCGTTATTGTTCGGAGCGTG 58.657 50.000 0.00 0.00 0.00 5.34
7904 9744 2.159282 AGATCGTTATTGTTCGGAGCGT 60.159 45.455 0.00 0.00 0.00 5.07
7905 9745 2.216488 CAGATCGTTATTGTTCGGAGCG 59.784 50.000 0.00 0.00 0.00 5.03
7906 9746 3.000322 CACAGATCGTTATTGTTCGGAGC 60.000 47.826 0.00 0.00 0.00 4.70
7907 9747 3.000322 GCACAGATCGTTATTGTTCGGAG 60.000 47.826 0.00 0.00 0.00 4.63
7908 9748 2.927477 GCACAGATCGTTATTGTTCGGA 59.073 45.455 0.00 0.00 0.00 4.55
7909 9749 2.285026 CGCACAGATCGTTATTGTTCGG 60.285 50.000 0.00 0.00 29.96 4.30
7910 9750 2.344441 ACGCACAGATCGTTATTGTTCG 59.656 45.455 3.29 3.29 36.72 3.95
7920 9760 1.131218 CACTGCAACGCACAGATCG 59.869 57.895 6.90 0.00 38.55 3.69
7950 9790 5.376756 AAATGGCAGGCAAATAATTCCAT 57.623 34.783 0.00 0.00 34.61 3.41
7976 9816 5.357032 CGGAGGGAGTATTAAACAGCAAAAT 59.643 40.000 0.00 0.00 0.00 1.82
7989 9829 9.597681 TCTTATATTTCTTTACGGAGGGAGTAT 57.402 33.333 0.00 0.00 0.00 2.12
7992 9832 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
7994 9834 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
7995 9835 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
7996 9836 7.140048 AGACGCTCTTATATTTCTTTACGGAG 58.860 38.462 0.00 0.00 0.00 4.63
7997 9837 7.035840 AGACGCTCTTATATTTCTTTACGGA 57.964 36.000 0.00 0.00 0.00 4.69
7998 9838 8.288208 TCTAGACGCTCTTATATTTCTTTACGG 58.712 37.037 0.00 0.00 0.00 4.02
7999 9839 9.828852 ATCTAGACGCTCTTATATTTCTTTACG 57.171 33.333 0.00 0.00 0.00 3.18
8002 9842 9.685828 GTGATCTAGACGCTCTTATATTTCTTT 57.314 33.333 0.00 0.00 0.00 2.52
8003 9843 9.073475 AGTGATCTAGACGCTCTTATATTTCTT 57.927 33.333 0.00 0.00 0.00 2.52
8004 9844 8.630054 AGTGATCTAGACGCTCTTATATTTCT 57.370 34.615 0.00 0.00 0.00 2.52
8005 9845 9.763465 GTAGTGATCTAGACGCTCTTATATTTC 57.237 37.037 10.41 0.00 0.00 2.17
8006 9846 9.509956 AGTAGTGATCTAGACGCTCTTATATTT 57.490 33.333 10.41 0.00 0.00 1.40
8008 9848 9.811995 CTAGTAGTGATCTAGACGCTCTTATAT 57.188 37.037 10.41 0.00 37.62 0.86
8009 9849 8.805175 ACTAGTAGTGATCTAGACGCTCTTATA 58.195 37.037 0.85 2.91 38.45 0.98
8010 9850 7.673180 ACTAGTAGTGATCTAGACGCTCTTAT 58.327 38.462 0.85 2.13 38.45 1.73
8011 9851 7.053316 ACTAGTAGTGATCTAGACGCTCTTA 57.947 40.000 0.85 5.83 38.45 2.10
8012 9852 5.920903 ACTAGTAGTGATCTAGACGCTCTT 58.079 41.667 0.85 5.20 38.45 2.85
8013 9853 5.540400 ACTAGTAGTGATCTAGACGCTCT 57.460 43.478 0.85 7.61 38.45 4.09
8014 9854 7.816031 AGATTACTAGTAGTGATCTAGACGCTC 59.184 40.741 27.54 7.00 45.92 5.03
8015 9855 7.673180 AGATTACTAGTAGTGATCTAGACGCT 58.327 38.462 27.54 9.44 45.92 5.07
8016 9856 7.894376 AGATTACTAGTAGTGATCTAGACGC 57.106 40.000 27.54 7.44 45.92 5.19
8048 9888 9.716556 TCCCTCAGTAAAGAAATATAAGAGAGT 57.283 33.333 0.00 0.00 0.00 3.24
8050 9890 9.716556 ACTCCCTCAGTAAAGAAATATAAGAGA 57.283 33.333 0.00 0.00 31.37 3.10
8056 9896 9.939424 AGTACTACTCCCTCAGTAAAGAAATAT 57.061 33.333 0.00 0.00 37.13 1.28
8057 9897 9.186837 CAGTACTACTCCCTCAGTAAAGAAATA 57.813 37.037 0.00 0.00 37.13 1.40
8058 9898 7.674772 ACAGTACTACTCCCTCAGTAAAGAAAT 59.325 37.037 0.00 0.00 37.13 2.17
8059 9899 7.008941 ACAGTACTACTCCCTCAGTAAAGAAA 58.991 38.462 0.00 0.00 37.13 2.52
8060 9900 6.550163 ACAGTACTACTCCCTCAGTAAAGAA 58.450 40.000 0.00 0.00 37.13 2.52
8061 9901 6.137104 ACAGTACTACTCCCTCAGTAAAGA 57.863 41.667 0.00 0.00 37.13 2.52
8062 9902 7.337167 TCTACAGTACTACTCCCTCAGTAAAG 58.663 42.308 0.00 0.00 37.13 1.85
8063 9903 7.262990 TCTACAGTACTACTCCCTCAGTAAA 57.737 40.000 0.00 0.00 37.13 2.01
8064 9904 6.881067 TCTACAGTACTACTCCCTCAGTAA 57.119 41.667 0.00 0.00 37.13 2.24
8065 9905 6.629068 CGTTCTACAGTACTACTCCCTCAGTA 60.629 46.154 0.00 0.00 36.43 2.74
8066 9906 5.499313 GTTCTACAGTACTACTCCCTCAGT 58.501 45.833 0.00 0.00 39.41 3.41
8067 9907 4.571580 CGTTCTACAGTACTACTCCCTCAG 59.428 50.000 0.00 0.00 0.00 3.35
8068 9908 4.019860 ACGTTCTACAGTACTACTCCCTCA 60.020 45.833 0.00 0.00 0.00 3.86
8069 9909 4.512484 ACGTTCTACAGTACTACTCCCTC 58.488 47.826 0.00 0.00 0.00 4.30
8070 9910 4.566426 ACGTTCTACAGTACTACTCCCT 57.434 45.455 0.00 0.00 0.00 4.20
8071 9911 5.064071 GTGTACGTTCTACAGTACTACTCCC 59.936 48.000 0.00 0.00 42.53 4.30
8072 9912 5.064071 GGTGTACGTTCTACAGTACTACTCC 59.936 48.000 0.00 0.00 42.53 3.85
8073 9913 5.639506 TGGTGTACGTTCTACAGTACTACTC 59.360 44.000 0.00 0.00 42.53 2.59
8074 9914 5.409826 GTGGTGTACGTTCTACAGTACTACT 59.590 44.000 0.00 0.00 42.53 2.57
8075 9915 5.390991 GGTGGTGTACGTTCTACAGTACTAC 60.391 48.000 0.00 0.00 42.53 2.73
8076 9916 4.695455 GGTGGTGTACGTTCTACAGTACTA 59.305 45.833 0.00 0.00 42.53 1.82
8077 9917 3.503748 GGTGGTGTACGTTCTACAGTACT 59.496 47.826 0.00 0.00 42.53 2.73
8078 9918 3.503748 AGGTGGTGTACGTTCTACAGTAC 59.496 47.826 0.00 0.00 42.43 2.73
8079 9919 3.753272 GAGGTGGTGTACGTTCTACAGTA 59.247 47.826 0.00 0.00 0.00 2.74
8080 9920 2.555757 GAGGTGGTGTACGTTCTACAGT 59.444 50.000 0.00 0.00 0.00 3.55
8081 9921 2.818432 AGAGGTGGTGTACGTTCTACAG 59.182 50.000 0.00 0.00 0.00 2.74
8082 9922 2.867624 AGAGGTGGTGTACGTTCTACA 58.132 47.619 0.00 0.00 0.00 2.74
8103 9943 4.000331 CAGAACTGTCTGTTGATGTCCT 58.000 45.455 0.00 0.00 45.44 3.85
8220 10060 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
8221 10061 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
8222 10062 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
8223 10063 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
8224 10064 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
8225 10065 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
8226 10066 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
8227 10067 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
8228 10068 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
8229 10069 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
8230 10070 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
8231 10071 8.800972 CATTCATTTTGATGACAAGTATTTCCG 58.199 33.333 0.00 0.00 37.32 4.30
8232 10072 9.090692 CCATTCATTTTGATGACAAGTATTTCC 57.909 33.333 0.00 0.00 37.32 3.13
8233 10073 9.859427 TCCATTCATTTTGATGACAAGTATTTC 57.141 29.630 0.00 0.00 37.32 2.17
8235 10075 9.865321 CTTCCATTCATTTTGATGACAAGTATT 57.135 29.630 0.00 0.00 37.32 1.89
8236 10076 8.472413 CCTTCCATTCATTTTGATGACAAGTAT 58.528 33.333 0.00 0.00 37.32 2.12
8237 10077 7.093814 CCCTTCCATTCATTTTGATGACAAGTA 60.094 37.037 0.00 0.00 37.32 2.24
8238 10078 6.295462 CCCTTCCATTCATTTTGATGACAAGT 60.295 38.462 0.00 0.00 37.32 3.16
8239 10079 6.103997 CCCTTCCATTCATTTTGATGACAAG 58.896 40.000 0.00 0.00 37.32 3.16
8240 10080 5.046448 CCCCTTCCATTCATTTTGATGACAA 60.046 40.000 0.00 0.00 0.00 3.18
8241 10081 4.467082 CCCCTTCCATTCATTTTGATGACA 59.533 41.667 0.00 0.00 0.00 3.58
8242 10082 4.711355 TCCCCTTCCATTCATTTTGATGAC 59.289 41.667 0.00 0.00 0.00 3.06
8243 10083 4.945411 TCCCCTTCCATTCATTTTGATGA 58.055 39.130 0.00 0.00 0.00 2.92
8244 10084 5.129815 ACATCCCCTTCCATTCATTTTGATG 59.870 40.000 0.00 0.00 33.80 3.07
8245 10085 5.282946 ACATCCCCTTCCATTCATTTTGAT 58.717 37.500 0.00 0.00 0.00 2.57
8246 10086 4.686891 ACATCCCCTTCCATTCATTTTGA 58.313 39.130 0.00 0.00 0.00 2.69
8247 10087 6.098695 ACATACATCCCCTTCCATTCATTTTG 59.901 38.462 0.00 0.00 0.00 2.44
8248 10088 6.204555 ACATACATCCCCTTCCATTCATTTT 58.795 36.000 0.00 0.00 0.00 1.82
8249 10089 5.780731 ACATACATCCCCTTCCATTCATTT 58.219 37.500 0.00 0.00 0.00 2.32
8250 10090 5.408079 ACATACATCCCCTTCCATTCATT 57.592 39.130 0.00 0.00 0.00 2.57
8251 10091 5.851693 TCTACATACATCCCCTTCCATTCAT 59.148 40.000 0.00 0.00 0.00 2.57
8252 10092 5.223655 TCTACATACATCCCCTTCCATTCA 58.776 41.667 0.00 0.00 0.00 2.57
8253 10093 5.825593 TCTACATACATCCCCTTCCATTC 57.174 43.478 0.00 0.00 0.00 2.67
8254 10094 5.612688 ACATCTACATACATCCCCTTCCATT 59.387 40.000 0.00 0.00 0.00 3.16
8255 10095 5.165652 ACATCTACATACATCCCCTTCCAT 58.834 41.667 0.00 0.00 0.00 3.41
8256 10096 4.566837 ACATCTACATACATCCCCTTCCA 58.433 43.478 0.00 0.00 0.00 3.53
8257 10097 6.875972 ATACATCTACATACATCCCCTTCC 57.124 41.667 0.00 0.00 0.00 3.46
8260 10100 9.393786 ACTAAAATACATCTACATACATCCCCT 57.606 33.333 0.00 0.00 0.00 4.79
8283 10123 9.457436 GGTCAAAAAGGGATGTATCTAAAACTA 57.543 33.333 0.00 0.00 0.00 2.24
8284 10124 7.947890 TGGTCAAAAAGGGATGTATCTAAAACT 59.052 33.333 0.00 0.00 0.00 2.66
8285 10125 8.117813 TGGTCAAAAAGGGATGTATCTAAAAC 57.882 34.615 0.00 0.00 0.00 2.43
8286 10126 8.893563 ATGGTCAAAAAGGGATGTATCTAAAA 57.106 30.769 0.00 0.00 0.00 1.52
8287 10127 8.893563 AATGGTCAAAAAGGGATGTATCTAAA 57.106 30.769 0.00 0.00 0.00 1.85
8288 10128 8.893563 AAATGGTCAAAAAGGGATGTATCTAA 57.106 30.769 0.00 0.00 0.00 2.10
8289 10129 8.748412 CAAAATGGTCAAAAAGGGATGTATCTA 58.252 33.333 0.00 0.00 0.00 1.98
8290 10130 7.454380 TCAAAATGGTCAAAAAGGGATGTATCT 59.546 33.333 0.00 0.00 0.00 1.98
8291 10131 7.610865 TCAAAATGGTCAAAAAGGGATGTATC 58.389 34.615 0.00 0.00 0.00 2.24
8292 10132 7.552050 TCAAAATGGTCAAAAAGGGATGTAT 57.448 32.000 0.00 0.00 0.00 2.29
8293 10133 6.985653 TCAAAATGGTCAAAAAGGGATGTA 57.014 33.333 0.00 0.00 0.00 2.29
8294 10134 5.885449 TCAAAATGGTCAAAAAGGGATGT 57.115 34.783 0.00 0.00 0.00 3.06
8295 10135 6.369615 GTCATCAAAATGGTCAAAAAGGGATG 59.630 38.462 0.00 0.00 33.42 3.51
8296 10136 6.043012 TGTCATCAAAATGGTCAAAAAGGGAT 59.957 34.615 0.00 0.00 33.42 3.85
8297 10137 5.365025 TGTCATCAAAATGGTCAAAAAGGGA 59.635 36.000 0.00 0.00 33.42 4.20
8298 10138 5.609423 TGTCATCAAAATGGTCAAAAAGGG 58.391 37.500 0.00 0.00 33.42 3.95
8299 10139 6.762661 ACTTGTCATCAAAATGGTCAAAAAGG 59.237 34.615 0.00 0.00 33.42 3.11
8300 10140 7.775397 ACTTGTCATCAAAATGGTCAAAAAG 57.225 32.000 0.00 0.00 33.42 2.27
8301 10141 9.829507 AATACTTGTCATCAAAATGGTCAAAAA 57.170 25.926 0.00 0.00 33.42 1.94
8302 10142 9.829507 AAATACTTGTCATCAAAATGGTCAAAA 57.170 25.926 0.00 0.00 33.42 2.44
8303 10143 9.829507 AAAATACTTGTCATCAAAATGGTCAAA 57.170 25.926 0.00 0.00 33.42 2.69
8304 10144 9.474920 GAAAATACTTGTCATCAAAATGGTCAA 57.525 29.630 0.00 0.00 33.42 3.18
8305 10145 7.807433 CGAAAATACTTGTCATCAAAATGGTCA 59.193 33.333 0.00 0.00 33.42 4.02
8306 10146 7.273381 CCGAAAATACTTGTCATCAAAATGGTC 59.727 37.037 0.00 0.00 33.42 4.02
8307 10147 7.040062 TCCGAAAATACTTGTCATCAAAATGGT 60.040 33.333 0.00 0.00 33.42 3.55
8308 10148 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
8309 10149 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
8310 10150 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
8311 10151 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
8312 10152 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
8313 10153 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
8314 10154 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
8315 10155 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
8316 10156 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
8317 10157 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
8318 10158 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
8319 10159 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
8320 10160 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
8321 10161 2.181975 TCCCTCCGTCCGAAAATACTT 58.818 47.619 0.00 0.00 0.00 2.24
8322 10162 1.856629 TCCCTCCGTCCGAAAATACT 58.143 50.000 0.00 0.00 0.00 2.12
8323 10163 2.678471 TTCCCTCCGTCCGAAAATAC 57.322 50.000 0.00 0.00 0.00 1.89
8324 10164 3.962718 AGTATTCCCTCCGTCCGAAAATA 59.037 43.478 0.00 0.00 0.00 1.40
8325 10165 2.770232 AGTATTCCCTCCGTCCGAAAAT 59.230 45.455 0.00 0.00 0.00 1.82
8326 10166 2.181975 AGTATTCCCTCCGTCCGAAAA 58.818 47.619 0.00 0.00 0.00 2.29
8327 10167 1.856629 AGTATTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
8328 10168 2.301346 GTAGTATTCCCTCCGTCCGAA 58.699 52.381 0.00 0.00 0.00 4.30
8329 10169 1.477558 GGTAGTATTCCCTCCGTCCGA 60.478 57.143 0.00 0.00 0.00 4.55
8330 10170 0.957362 GGTAGTATTCCCTCCGTCCG 59.043 60.000 0.00 0.00 0.00 4.79
8331 10171 2.378378 AGGTAGTATTCCCTCCGTCC 57.622 55.000 0.00 0.00 0.00 4.79
8332 10172 5.780984 CATAAAGGTAGTATTCCCTCCGTC 58.219 45.833 0.00 0.00 0.00 4.79
8333 10173 4.040095 GCATAAAGGTAGTATTCCCTCCGT 59.960 45.833 0.00 0.00 0.00 4.69
8334 10174 4.283722 AGCATAAAGGTAGTATTCCCTCCG 59.716 45.833 0.00 0.00 0.00 4.63
8335 10175 5.071923 ACAGCATAAAGGTAGTATTCCCTCC 59.928 44.000 0.00 0.00 0.00 4.30
8336 10176 6.176014 ACAGCATAAAGGTAGTATTCCCTC 57.824 41.667 0.00 0.00 0.00 4.30
8337 10177 7.567622 TCTTACAGCATAAAGGTAGTATTCCCT 59.432 37.037 0.00 0.00 0.00 4.20
8338 10178 7.732996 TCTTACAGCATAAAGGTAGTATTCCC 58.267 38.462 0.00 0.00 0.00 3.97
8339 10179 7.873505 CCTCTTACAGCATAAAGGTAGTATTCC 59.126 40.741 0.00 0.00 0.00 3.01
8340 10180 7.385478 GCCTCTTACAGCATAAAGGTAGTATTC 59.615 40.741 0.00 0.00 0.00 1.75
8341 10181 7.147549 TGCCTCTTACAGCATAAAGGTAGTATT 60.148 37.037 0.00 0.00 33.08 1.89
8342 10182 6.326583 TGCCTCTTACAGCATAAAGGTAGTAT 59.673 38.462 0.00 0.00 33.08 2.12
8389 10229 3.830178 TCGATTCAACCTACAGACCTTCA 59.170 43.478 0.00 0.00 0.00 3.02
8408 10248 0.249868 CACAGGACTGCCAGTTTCGA 60.250 55.000 0.00 0.00 36.29 3.71
8418 10258 0.176680 CCCGGATTCTCACAGGACTG 59.823 60.000 0.73 0.00 0.00 3.51
8435 10275 3.564225 CCGTACAAGGATATCTTTTGCCC 59.436 47.826 15.73 8.83 32.41 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.