Multiple sequence alignment - TraesCS2B01G363900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G363900 chr2B 100.000 2711 0 0 1 2711 518050455 518053165 0.000000e+00 5007
1 TraesCS2B01G363900 chr7B 94.582 2178 112 4 537 2711 49223816 49221642 0.000000e+00 3363
2 TraesCS2B01G363900 chr7B 94.150 2171 122 4 541 2711 377024847 377022682 0.000000e+00 3301
3 TraesCS2B01G363900 chr7B 93.122 2181 138 6 535 2711 442357633 442359805 0.000000e+00 3186
4 TraesCS2B01G363900 chr6A 93.281 2173 137 6 539 2711 53151873 53154036 0.000000e+00 3195
5 TraesCS2B01G363900 chr7D 92.975 2178 137 9 537 2711 85019320 85021484 0.000000e+00 3160
6 TraesCS2B01G363900 chr5B 92.736 2175 140 7 537 2710 442393816 442391659 0.000000e+00 3125
7 TraesCS2B01G363900 chr4A 92.318 2174 153 8 541 2711 138429299 138427137 0.000000e+00 3077
8 TraesCS2B01G363900 chr4A 92.177 2173 156 7 539 2711 684073265 684075423 0.000000e+00 3059
9 TraesCS2B01G363900 chr1B 92.258 2170 161 4 542 2711 335763713 335765875 0.000000e+00 3070
10 TraesCS2B01G363900 chr2A 88.386 508 15 14 1 480 583842001 583842492 3.030000e-159 571
11 TraesCS2B01G363900 chr2D 87.698 504 15 18 1 480 440325725 440326205 6.600000e-151 544


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G363900 chr2B 518050455 518053165 2710 False 5007 5007 100.000 1 2711 1 chr2B.!!$F1 2710
1 TraesCS2B01G363900 chr7B 49221642 49223816 2174 True 3363 3363 94.582 537 2711 1 chr7B.!!$R1 2174
2 TraesCS2B01G363900 chr7B 377022682 377024847 2165 True 3301 3301 94.150 541 2711 1 chr7B.!!$R2 2170
3 TraesCS2B01G363900 chr7B 442357633 442359805 2172 False 3186 3186 93.122 535 2711 1 chr7B.!!$F1 2176
4 TraesCS2B01G363900 chr6A 53151873 53154036 2163 False 3195 3195 93.281 539 2711 1 chr6A.!!$F1 2172
5 TraesCS2B01G363900 chr7D 85019320 85021484 2164 False 3160 3160 92.975 537 2711 1 chr7D.!!$F1 2174
6 TraesCS2B01G363900 chr5B 442391659 442393816 2157 True 3125 3125 92.736 537 2710 1 chr5B.!!$R1 2173
7 TraesCS2B01G363900 chr4A 138427137 138429299 2162 True 3077 3077 92.318 541 2711 1 chr4A.!!$R1 2170
8 TraesCS2B01G363900 chr4A 684073265 684075423 2158 False 3059 3059 92.177 539 2711 1 chr4A.!!$F1 2172
9 TraesCS2B01G363900 chr1B 335763713 335765875 2162 False 3070 3070 92.258 542 2711 1 chr1B.!!$F1 2169

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.030705 TAGCTCTGGGGAGAGGCAAT 60.031 55.0 0.00 0.00 41.86 3.56 F
110 111 0.101579 TCGCATCGCCGATCTTGTAA 59.898 50.0 0.00 0.00 31.36 2.41 F
268 269 0.532573 TGCTGTCGATCAGAACCTCC 59.467 55.0 16.09 1.86 46.27 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1274 1290 0.417437 TGGATCCTCTCCTGTTCCCA 59.583 55.000 14.23 0.0 45.21 4.37 R
1315 1331 1.005037 AGCCTCGACGTCATTGCAA 60.005 52.632 17.16 0.0 0.00 4.08 R
2236 2256 0.040204 CAAAGCCCCACTGGAGGATT 59.960 55.000 0.00 0.0 35.39 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.772191 TGTCAGGTGGTGGCTGGT 60.772 61.111 0.00 0.00 0.00 4.00
18 19 2.382770 TGTCAGGTGGTGGCTGGTT 61.383 57.895 0.00 0.00 0.00 3.67
19 20 1.898574 GTCAGGTGGTGGCTGGTTG 60.899 63.158 0.00 0.00 0.00 3.77
20 21 3.297620 CAGGTGGTGGCTGGTTGC 61.298 66.667 0.00 0.00 41.94 4.17
21 22 3.819652 AGGTGGTGGCTGGTTGCA 61.820 61.111 0.00 0.00 45.15 4.08
22 23 2.601367 GGTGGTGGCTGGTTGCAT 60.601 61.111 0.00 0.00 45.15 3.96
23 24 2.639327 GGTGGTGGCTGGTTGCATC 61.639 63.158 0.00 0.00 45.15 3.91
24 25 2.283101 TGGTGGCTGGTTGCATCC 60.283 61.111 6.88 6.88 45.15 3.51
25 26 2.036256 GGTGGCTGGTTGCATCCT 59.964 61.111 14.81 0.00 45.15 3.24
26 27 1.607467 GGTGGCTGGTTGCATCCTT 60.607 57.895 14.81 0.00 45.15 3.36
27 28 1.588082 GTGGCTGGTTGCATCCTTG 59.412 57.895 14.81 8.76 45.15 3.61
28 29 1.607178 TGGCTGGTTGCATCCTTGG 60.607 57.895 14.81 6.52 45.15 3.61
29 30 1.304381 GGCTGGTTGCATCCTTGGA 60.304 57.895 14.81 0.00 45.15 3.53
30 31 0.899717 GGCTGGTTGCATCCTTGGAA 60.900 55.000 14.81 0.00 45.15 3.53
31 32 1.188863 GCTGGTTGCATCCTTGGAAT 58.811 50.000 14.81 0.00 42.31 3.01
32 33 1.135721 GCTGGTTGCATCCTTGGAATC 59.864 52.381 14.81 0.00 42.31 2.52
33 34 1.753073 CTGGTTGCATCCTTGGAATCC 59.247 52.381 14.81 0.00 33.65 3.01
34 35 1.358787 TGGTTGCATCCTTGGAATCCT 59.641 47.619 14.81 0.00 33.65 3.24
35 36 2.027385 GGTTGCATCCTTGGAATCCTC 58.973 52.381 6.56 0.00 35.50 3.71
36 37 2.621407 GGTTGCATCCTTGGAATCCTCA 60.621 50.000 6.56 0.00 35.50 3.86
37 38 2.424956 GTTGCATCCTTGGAATCCTCAC 59.575 50.000 0.00 0.00 35.50 3.51
38 39 1.303309 GCATCCTTGGAATCCTCACG 58.697 55.000 0.00 0.00 0.00 4.35
39 40 1.959042 CATCCTTGGAATCCTCACGG 58.041 55.000 0.00 0.00 0.00 4.94
40 41 0.181350 ATCCTTGGAATCCTCACGGC 59.819 55.000 0.00 0.00 0.00 5.68
41 42 0.909610 TCCTTGGAATCCTCACGGCT 60.910 55.000 0.00 0.00 0.00 5.52
42 43 0.745845 CCTTGGAATCCTCACGGCTG 60.746 60.000 0.00 0.00 0.00 4.85
43 44 0.036010 CTTGGAATCCTCACGGCTGT 60.036 55.000 0.00 0.00 0.00 4.40
45 46 1.450312 GGAATCCTCACGGCTGTGG 60.450 63.158 25.15 15.30 46.42 4.17
46 47 1.296715 GAATCCTCACGGCTGTGGT 59.703 57.895 25.15 6.87 46.42 4.16
47 48 0.741221 GAATCCTCACGGCTGTGGTC 60.741 60.000 25.15 11.21 46.42 4.02
48 49 1.480212 AATCCTCACGGCTGTGGTCA 61.480 55.000 25.15 9.58 46.42 4.02
49 50 1.267574 ATCCTCACGGCTGTGGTCAT 61.268 55.000 25.15 11.41 46.42 3.06
50 51 1.742880 CCTCACGGCTGTGGTCATG 60.743 63.158 25.15 10.39 46.42 3.07
51 52 2.358615 TCACGGCTGTGGTCATGC 60.359 61.111 25.15 0.00 46.42 4.06
52 53 2.359107 CACGGCTGTGGTCATGCT 60.359 61.111 18.43 0.00 42.59 3.79
53 54 2.046892 ACGGCTGTGGTCATGCTC 60.047 61.111 0.00 0.00 0.00 4.26
54 55 2.267006 CGGCTGTGGTCATGCTCT 59.733 61.111 0.00 0.00 0.00 4.09
55 56 1.376424 CGGCTGTGGTCATGCTCTT 60.376 57.895 0.00 0.00 0.00 2.85
56 57 0.108186 CGGCTGTGGTCATGCTCTTA 60.108 55.000 0.00 0.00 0.00 2.10
57 58 1.661341 GGCTGTGGTCATGCTCTTAG 58.339 55.000 0.00 0.00 0.00 2.18
58 59 1.012841 GCTGTGGTCATGCTCTTAGC 58.987 55.000 0.00 0.00 42.82 3.09
59 60 1.406614 GCTGTGGTCATGCTCTTAGCT 60.407 52.381 0.00 0.00 42.97 3.32
60 61 2.548875 CTGTGGTCATGCTCTTAGCTC 58.451 52.381 0.00 0.00 42.97 4.09
61 62 2.168106 CTGTGGTCATGCTCTTAGCTCT 59.832 50.000 0.00 0.00 42.97 4.09
62 63 2.093816 TGTGGTCATGCTCTTAGCTCTG 60.094 50.000 0.00 0.00 42.97 3.35
63 64 1.483827 TGGTCATGCTCTTAGCTCTGG 59.516 52.381 0.00 0.00 42.97 3.86
64 65 1.202627 GGTCATGCTCTTAGCTCTGGG 60.203 57.143 0.00 0.00 42.97 4.45
65 66 1.126488 TCATGCTCTTAGCTCTGGGG 58.874 55.000 0.00 0.00 42.97 4.96
66 67 1.126488 CATGCTCTTAGCTCTGGGGA 58.874 55.000 0.00 0.00 42.97 4.81
67 68 1.070445 CATGCTCTTAGCTCTGGGGAG 59.930 57.143 0.00 0.00 42.97 4.30
68 69 0.336392 TGCTCTTAGCTCTGGGGAGA 59.664 55.000 0.00 0.00 42.97 3.71
69 70 1.039856 GCTCTTAGCTCTGGGGAGAG 58.960 60.000 0.00 0.00 41.86 3.20
70 71 1.703411 CTCTTAGCTCTGGGGAGAGG 58.297 60.000 0.00 0.00 41.86 3.69
71 72 0.397816 TCTTAGCTCTGGGGAGAGGC 60.398 60.000 0.00 0.00 41.86 4.70
72 73 0.689080 CTTAGCTCTGGGGAGAGGCA 60.689 60.000 0.00 0.00 41.86 4.75
73 74 0.252696 TTAGCTCTGGGGAGAGGCAA 60.253 55.000 0.00 0.00 41.86 4.52
74 75 0.030705 TAGCTCTGGGGAGAGGCAAT 60.031 55.000 0.00 0.00 41.86 3.56
75 76 0.030705 AGCTCTGGGGAGAGGCAATA 60.031 55.000 0.00 0.00 41.86 1.90
76 77 1.063183 GCTCTGGGGAGAGGCAATAT 58.937 55.000 0.00 0.00 41.86 1.28
77 78 1.423161 GCTCTGGGGAGAGGCAATATT 59.577 52.381 0.00 0.00 41.86 1.28
78 79 2.158549 GCTCTGGGGAGAGGCAATATTT 60.159 50.000 0.00 0.00 41.86 1.40
79 80 3.484407 CTCTGGGGAGAGGCAATATTTG 58.516 50.000 0.00 0.00 41.86 2.32
80 81 3.122480 TCTGGGGAGAGGCAATATTTGA 58.878 45.455 0.00 0.00 0.00 2.69
81 82 3.723681 TCTGGGGAGAGGCAATATTTGAT 59.276 43.478 0.00 0.00 0.00 2.57
82 83 4.077822 CTGGGGAGAGGCAATATTTGATC 58.922 47.826 0.00 0.00 0.00 2.92
83 84 3.462954 TGGGGAGAGGCAATATTTGATCA 59.537 43.478 0.00 0.00 0.00 2.92
84 85 4.106825 TGGGGAGAGGCAATATTTGATCAT 59.893 41.667 0.00 0.00 0.00 2.45
85 86 4.704057 GGGGAGAGGCAATATTTGATCATC 59.296 45.833 0.00 0.00 0.00 2.92
86 87 5.516238 GGGGAGAGGCAATATTTGATCATCT 60.516 44.000 0.00 0.00 0.00 2.90
87 88 6.296662 GGGGAGAGGCAATATTTGATCATCTA 60.297 42.308 0.00 0.00 0.00 1.98
88 89 7.170965 GGGAGAGGCAATATTTGATCATCTAA 58.829 38.462 0.00 0.00 0.00 2.10
89 90 7.833183 GGGAGAGGCAATATTTGATCATCTAAT 59.167 37.037 0.00 0.00 0.00 1.73
90 91 9.896645 GGAGAGGCAATATTTGATCATCTAATA 57.103 33.333 4.30 4.30 30.96 0.98
94 95 8.834465 AGGCAATATTTGATCATCTAATATCGC 58.166 33.333 13.41 13.41 35.36 4.58
95 96 8.615211 GGCAATATTTGATCATCTAATATCGCA 58.385 33.333 19.82 0.00 36.73 5.10
99 100 5.956171 TTGATCATCTAATATCGCATCGC 57.044 39.130 0.00 0.00 0.00 4.58
100 101 4.363138 TGATCATCTAATATCGCATCGCC 58.637 43.478 0.00 0.00 0.00 5.54
101 102 2.797491 TCATCTAATATCGCATCGCCG 58.203 47.619 0.00 0.00 0.00 6.46
102 103 2.422127 TCATCTAATATCGCATCGCCGA 59.578 45.455 0.00 0.00 41.98 5.54
104 105 3.066369 TCTAATATCGCATCGCCGATC 57.934 47.619 0.00 0.00 43.91 3.69
105 106 2.683362 TCTAATATCGCATCGCCGATCT 59.317 45.455 0.00 0.00 43.91 2.75
106 107 2.370281 AATATCGCATCGCCGATCTT 57.630 45.000 0.00 4.04 43.91 2.40
107 108 1.633561 ATATCGCATCGCCGATCTTG 58.366 50.000 0.00 0.00 43.91 3.02
108 109 0.313987 TATCGCATCGCCGATCTTGT 59.686 50.000 0.00 0.00 43.91 3.16
109 110 0.313987 ATCGCATCGCCGATCTTGTA 59.686 50.000 0.00 0.00 43.91 2.41
110 111 0.101579 TCGCATCGCCGATCTTGTAA 59.898 50.000 0.00 0.00 31.36 2.41
111 112 0.927537 CGCATCGCCGATCTTGTAAA 59.072 50.000 0.00 0.00 0.00 2.01
112 113 3.362758 TCGCATCGCCGATCTTGTAAAG 61.363 50.000 0.00 0.00 37.55 1.85
113 114 1.333258 GCATCGCCGATCTTGTAAAGC 60.333 52.381 0.00 0.00 45.70 3.51
114 115 1.933181 CATCGCCGATCTTGTAAAGCA 59.067 47.619 0.00 0.00 45.70 3.91
115 116 2.309528 TCGCCGATCTTGTAAAGCAT 57.690 45.000 0.00 0.00 45.70 3.79
116 117 3.446310 TCGCCGATCTTGTAAAGCATA 57.554 42.857 0.00 0.00 45.70 3.14
117 118 3.120792 TCGCCGATCTTGTAAAGCATAC 58.879 45.455 0.00 0.00 45.70 2.39
118 119 2.863740 CGCCGATCTTGTAAAGCATACA 59.136 45.455 0.00 0.00 45.70 2.29
119 120 3.308595 CGCCGATCTTGTAAAGCATACAA 59.691 43.478 12.71 12.71 45.70 2.41
120 121 4.201773 CGCCGATCTTGTAAAGCATACAAA 60.202 41.667 13.85 7.65 45.70 2.83
121 122 5.636837 GCCGATCTTGTAAAGCATACAAAA 58.363 37.500 13.85 4.30 45.70 2.44
122 123 5.739161 GCCGATCTTGTAAAGCATACAAAAG 59.261 40.000 13.85 6.02 45.70 2.27
123 124 6.403200 GCCGATCTTGTAAAGCATACAAAAGA 60.403 38.462 13.85 10.08 45.70 2.52
124 125 7.526608 CCGATCTTGTAAAGCATACAAAAGAA 58.473 34.615 13.85 3.97 45.70 2.52
125 126 7.693951 CCGATCTTGTAAAGCATACAAAAGAAG 59.306 37.037 13.85 4.91 45.70 2.85
126 127 7.217070 CGATCTTGTAAAGCATACAAAAGAAGC 59.783 37.037 13.85 6.89 45.70 3.86
127 128 7.510549 TCTTGTAAAGCATACAAAAGAAGCT 57.489 32.000 13.85 0.00 45.70 3.74
128 129 7.584987 TCTTGTAAAGCATACAAAAGAAGCTC 58.415 34.615 13.85 0.00 45.70 4.09
129 130 6.875948 TGTAAAGCATACAAAAGAAGCTCA 57.124 33.333 0.36 0.00 33.83 4.26
130 131 7.452880 TGTAAAGCATACAAAAGAAGCTCAT 57.547 32.000 0.36 0.00 33.83 2.90
131 132 7.530010 TGTAAAGCATACAAAAGAAGCTCATC 58.470 34.615 0.36 0.00 33.83 2.92
132 133 6.830873 AAAGCATACAAAAGAAGCTCATCT 57.169 33.333 0.00 0.00 33.83 2.90
133 134 6.830873 AAGCATACAAAAGAAGCTCATCTT 57.169 33.333 0.00 0.00 41.34 2.40
135 136 6.618811 AGCATACAAAAGAAGCTCATCTTTG 58.381 36.000 12.96 10.40 46.25 2.77
136 137 6.432162 AGCATACAAAAGAAGCTCATCTTTGA 59.568 34.615 12.96 4.23 46.25 2.69
137 138 7.122353 AGCATACAAAAGAAGCTCATCTTTGAT 59.878 33.333 12.96 7.85 46.25 2.57
138 139 7.220300 GCATACAAAAGAAGCTCATCTTTGATG 59.780 37.037 12.96 15.42 46.25 3.07
139 140 6.645790 ACAAAAGAAGCTCATCTTTGATGT 57.354 33.333 12.96 11.56 46.25 3.06
140 141 7.750229 ACAAAAGAAGCTCATCTTTGATGTA 57.250 32.000 12.96 0.00 46.25 2.29
141 142 8.169977 ACAAAAGAAGCTCATCTTTGATGTAA 57.830 30.769 12.96 0.00 46.25 2.41
142 143 8.800332 ACAAAAGAAGCTCATCTTTGATGTAAT 58.200 29.630 12.96 0.00 46.25 1.89
143 144 9.073368 CAAAAGAAGCTCATCTTTGATGTAATG 57.927 33.333 12.96 3.91 46.25 1.90
144 145 7.934855 AAGAAGCTCATCTTTGATGTAATGT 57.065 32.000 7.33 0.00 36.23 2.71
145 146 7.317842 AGAAGCTCATCTTTGATGTAATGTG 57.682 36.000 7.33 0.00 34.56 3.21
146 147 6.883217 AGAAGCTCATCTTTGATGTAATGTGT 59.117 34.615 7.33 0.00 34.56 3.72
147 148 8.043113 AGAAGCTCATCTTTGATGTAATGTGTA 58.957 33.333 7.33 0.00 34.56 2.90
148 149 8.565896 AAGCTCATCTTTGATGTAATGTGTAA 57.434 30.769 7.33 0.00 0.00 2.41
149 150 8.565896 AGCTCATCTTTGATGTAATGTGTAAA 57.434 30.769 7.33 0.00 0.00 2.01
150 151 9.013229 AGCTCATCTTTGATGTAATGTGTAAAA 57.987 29.630 7.33 0.00 0.00 1.52
151 152 9.282247 GCTCATCTTTGATGTAATGTGTAAAAG 57.718 33.333 7.33 0.00 0.00 2.27
154 155 9.345517 CATCTTTGATGTAATGTGTAAAAGTGG 57.654 33.333 0.00 0.00 0.00 4.00
155 156 7.367285 TCTTTGATGTAATGTGTAAAAGTGGC 58.633 34.615 0.00 0.00 0.00 5.01
156 157 5.637006 TGATGTAATGTGTAAAAGTGGCC 57.363 39.130 0.00 0.00 0.00 5.36
157 158 5.321102 TGATGTAATGTGTAAAAGTGGCCT 58.679 37.500 3.32 0.00 0.00 5.19
158 159 5.182950 TGATGTAATGTGTAAAAGTGGCCTG 59.817 40.000 3.32 0.00 0.00 4.85
159 160 4.465886 TGTAATGTGTAAAAGTGGCCTGT 58.534 39.130 3.32 0.00 0.00 4.00
160 161 4.517453 TGTAATGTGTAAAAGTGGCCTGTC 59.483 41.667 3.32 0.00 0.00 3.51
161 162 1.975660 TGTGTAAAAGTGGCCTGTCC 58.024 50.000 3.32 0.00 0.00 4.02
162 163 1.213182 TGTGTAAAAGTGGCCTGTCCA 59.787 47.619 3.32 0.00 44.18 4.02
169 170 3.654143 TGGCCTGTCCATGCTGCT 61.654 61.111 3.32 0.00 40.72 4.24
170 171 2.300197 TGGCCTGTCCATGCTGCTA 61.300 57.895 3.32 0.00 40.72 3.49
171 172 1.821332 GGCCTGTCCATGCTGCTAC 60.821 63.158 0.00 0.00 34.01 3.58
172 173 1.078214 GCCTGTCCATGCTGCTACA 60.078 57.895 0.00 0.00 0.00 2.74
173 174 0.677731 GCCTGTCCATGCTGCTACAA 60.678 55.000 0.00 0.00 0.00 2.41
174 175 1.825090 CCTGTCCATGCTGCTACAAA 58.175 50.000 0.00 0.00 0.00 2.83
175 176 1.741706 CCTGTCCATGCTGCTACAAAG 59.258 52.381 0.00 0.00 0.00 2.77
176 177 2.430465 CTGTCCATGCTGCTACAAAGT 58.570 47.619 0.00 0.00 0.00 2.66
177 178 2.417933 CTGTCCATGCTGCTACAAAGTC 59.582 50.000 0.00 0.00 0.00 3.01
178 179 2.038952 TGTCCATGCTGCTACAAAGTCT 59.961 45.455 0.00 0.00 0.00 3.24
179 180 3.077359 GTCCATGCTGCTACAAAGTCTT 58.923 45.455 0.00 0.00 0.00 3.01
180 181 4.253685 GTCCATGCTGCTACAAAGTCTTA 58.746 43.478 0.00 0.00 0.00 2.10
181 182 4.695455 GTCCATGCTGCTACAAAGTCTTAA 59.305 41.667 0.00 0.00 0.00 1.85
182 183 4.695455 TCCATGCTGCTACAAAGTCTTAAC 59.305 41.667 0.00 0.00 0.00 2.01
183 184 4.697352 CCATGCTGCTACAAAGTCTTAACT 59.303 41.667 0.00 0.00 37.32 2.24
184 185 5.391310 CCATGCTGCTACAAAGTCTTAACTG 60.391 44.000 0.00 0.00 35.36 3.16
185 186 4.956085 TGCTGCTACAAAGTCTTAACTGA 58.044 39.130 0.00 0.00 35.36 3.41
186 187 5.551233 TGCTGCTACAAAGTCTTAACTGAT 58.449 37.500 0.00 0.00 35.36 2.90
187 188 6.697395 TGCTGCTACAAAGTCTTAACTGATA 58.303 36.000 0.00 0.00 35.36 2.15
188 189 7.331026 TGCTGCTACAAAGTCTTAACTGATAT 58.669 34.615 0.00 0.00 35.36 1.63
189 190 8.474831 TGCTGCTACAAAGTCTTAACTGATATA 58.525 33.333 0.00 0.00 35.36 0.86
190 191 8.973378 GCTGCTACAAAGTCTTAACTGATATAG 58.027 37.037 0.00 0.00 35.36 1.31
196 197 9.757227 ACAAAGTCTTAACTGATATAGATCTGC 57.243 33.333 5.18 0.00 35.36 4.26
197 198 8.910666 CAAAGTCTTAACTGATATAGATCTGCG 58.089 37.037 5.18 0.00 35.36 5.18
198 199 6.616947 AGTCTTAACTGATATAGATCTGCGC 58.383 40.000 5.18 0.00 35.08 6.09
199 200 6.432783 AGTCTTAACTGATATAGATCTGCGCT 59.567 38.462 9.73 0.00 35.08 5.92
200 201 6.526325 GTCTTAACTGATATAGATCTGCGCTG 59.474 42.308 9.73 8.88 35.08 5.18
201 202 4.862902 AACTGATATAGATCTGCGCTGT 57.137 40.909 9.73 0.00 35.08 4.40
202 203 5.966742 AACTGATATAGATCTGCGCTGTA 57.033 39.130 9.73 0.00 35.08 2.74
203 204 5.559427 ACTGATATAGATCTGCGCTGTAG 57.441 43.478 9.73 0.00 35.08 2.74
204 205 4.397730 ACTGATATAGATCTGCGCTGTAGG 59.602 45.833 9.73 0.00 35.08 3.18
205 206 4.589908 TGATATAGATCTGCGCTGTAGGA 58.410 43.478 9.73 0.00 32.79 2.94
206 207 5.196695 TGATATAGATCTGCGCTGTAGGAT 58.803 41.667 9.73 4.58 32.79 3.24
207 208 5.654209 TGATATAGATCTGCGCTGTAGGATT 59.346 40.000 9.73 0.00 32.79 3.01
208 209 2.522836 AGATCTGCGCTGTAGGATTG 57.477 50.000 9.73 0.00 0.00 2.67
209 210 1.759445 AGATCTGCGCTGTAGGATTGT 59.241 47.619 9.73 0.00 0.00 2.71
210 211 2.959030 AGATCTGCGCTGTAGGATTGTA 59.041 45.455 9.73 0.00 0.00 2.41
211 212 2.871182 TCTGCGCTGTAGGATTGTAG 57.129 50.000 9.73 0.00 0.00 2.74
212 213 1.409064 TCTGCGCTGTAGGATTGTAGG 59.591 52.381 9.73 0.00 0.00 3.18
213 214 1.137086 CTGCGCTGTAGGATTGTAGGT 59.863 52.381 9.73 0.00 0.00 3.08
214 215 1.136305 TGCGCTGTAGGATTGTAGGTC 59.864 52.381 9.73 0.00 0.00 3.85
215 216 1.864435 GCGCTGTAGGATTGTAGGTCG 60.864 57.143 0.00 0.00 0.00 4.79
216 217 1.404391 CGCTGTAGGATTGTAGGTCGT 59.596 52.381 0.00 0.00 0.00 4.34
217 218 2.615447 CGCTGTAGGATTGTAGGTCGTA 59.385 50.000 0.00 0.00 0.00 3.43
218 219 3.303857 CGCTGTAGGATTGTAGGTCGTAG 60.304 52.174 0.00 0.00 0.00 3.51
219 220 3.550436 GCTGTAGGATTGTAGGTCGTAGC 60.550 52.174 0.00 0.00 0.00 3.58
220 221 3.884091 CTGTAGGATTGTAGGTCGTAGCT 59.116 47.826 0.00 0.00 0.00 3.32
221 222 4.275810 TGTAGGATTGTAGGTCGTAGCTT 58.724 43.478 0.00 0.00 0.00 3.74
222 223 4.337555 TGTAGGATTGTAGGTCGTAGCTTC 59.662 45.833 0.00 0.00 0.00 3.86
223 224 3.362706 AGGATTGTAGGTCGTAGCTTCA 58.637 45.455 0.00 0.00 0.00 3.02
224 225 3.381908 AGGATTGTAGGTCGTAGCTTCAG 59.618 47.826 0.00 0.00 0.00 3.02
225 226 3.130693 GGATTGTAGGTCGTAGCTTCAGT 59.869 47.826 0.00 0.00 0.00 3.41
226 227 4.381718 GGATTGTAGGTCGTAGCTTCAGTT 60.382 45.833 0.00 0.00 0.00 3.16
227 228 3.570926 TGTAGGTCGTAGCTTCAGTTG 57.429 47.619 0.00 0.00 0.00 3.16
228 229 2.230508 TGTAGGTCGTAGCTTCAGTTGG 59.769 50.000 0.00 0.00 0.00 3.77
229 230 1.339097 AGGTCGTAGCTTCAGTTGGT 58.661 50.000 0.00 0.00 0.00 3.67
230 231 1.000955 AGGTCGTAGCTTCAGTTGGTG 59.999 52.381 0.00 0.00 0.00 4.17
231 232 0.790814 GTCGTAGCTTCAGTTGGTGC 59.209 55.000 0.00 0.00 0.00 5.01
232 233 0.679505 TCGTAGCTTCAGTTGGTGCT 59.320 50.000 0.00 0.00 39.30 4.40
233 234 0.792640 CGTAGCTTCAGTTGGTGCTG 59.207 55.000 0.00 0.00 37.02 4.41
234 235 1.873903 CGTAGCTTCAGTTGGTGCTGT 60.874 52.381 0.00 0.00 37.70 4.40
235 236 2.609491 CGTAGCTTCAGTTGGTGCTGTA 60.609 50.000 0.00 0.00 37.70 2.74
236 237 2.638480 AGCTTCAGTTGGTGCTGTAA 57.362 45.000 0.00 0.00 37.70 2.41
237 238 2.930950 AGCTTCAGTTGGTGCTGTAAA 58.069 42.857 0.00 0.00 37.70 2.01
238 239 3.490348 AGCTTCAGTTGGTGCTGTAAAT 58.510 40.909 0.00 0.00 37.70 1.40
239 240 3.503748 AGCTTCAGTTGGTGCTGTAAATC 59.496 43.478 0.00 0.00 37.70 2.17
240 241 3.503748 GCTTCAGTTGGTGCTGTAAATCT 59.496 43.478 0.00 0.00 37.70 2.40
241 242 4.614535 GCTTCAGTTGGTGCTGTAAATCTG 60.615 45.833 0.00 0.00 37.70 2.90
242 243 4.350368 TCAGTTGGTGCTGTAAATCTGA 57.650 40.909 0.00 0.00 37.70 3.27
243 244 4.318332 TCAGTTGGTGCTGTAAATCTGAG 58.682 43.478 0.00 0.00 37.70 3.35
244 245 4.040339 TCAGTTGGTGCTGTAAATCTGAGA 59.960 41.667 0.00 0.00 37.70 3.27
245 246 4.940046 CAGTTGGTGCTGTAAATCTGAGAT 59.060 41.667 0.00 0.00 0.00 2.75
246 247 4.940046 AGTTGGTGCTGTAAATCTGAGATG 59.060 41.667 0.00 0.00 0.00 2.90
247 248 4.558226 TGGTGCTGTAAATCTGAGATGT 57.442 40.909 0.00 0.00 0.00 3.06
248 249 4.910195 TGGTGCTGTAAATCTGAGATGTT 58.090 39.130 0.00 0.00 0.00 2.71
249 250 5.316167 TGGTGCTGTAAATCTGAGATGTTT 58.684 37.500 0.00 0.00 0.00 2.83
250 251 5.181811 TGGTGCTGTAAATCTGAGATGTTTG 59.818 40.000 0.00 0.00 0.00 2.93
251 252 5.091431 GTGCTGTAAATCTGAGATGTTTGC 58.909 41.667 0.00 0.00 0.00 3.68
252 253 5.005740 TGCTGTAAATCTGAGATGTTTGCT 58.994 37.500 0.00 0.00 0.00 3.91
253 254 5.106436 TGCTGTAAATCTGAGATGTTTGCTG 60.106 40.000 0.00 0.00 0.00 4.41
254 255 5.106396 GCTGTAAATCTGAGATGTTTGCTGT 60.106 40.000 0.00 0.00 0.00 4.40
255 256 6.486253 TGTAAATCTGAGATGTTTGCTGTC 57.514 37.500 0.00 0.00 0.00 3.51
256 257 4.675190 AAATCTGAGATGTTTGCTGTCG 57.325 40.909 0.00 0.00 0.00 4.35
257 258 3.599730 ATCTGAGATGTTTGCTGTCGA 57.400 42.857 0.00 0.00 0.00 4.20
258 259 3.599730 TCTGAGATGTTTGCTGTCGAT 57.400 42.857 0.00 0.00 0.00 3.59
259 260 3.515630 TCTGAGATGTTTGCTGTCGATC 58.484 45.455 0.00 0.00 0.00 3.69
260 261 3.056607 TCTGAGATGTTTGCTGTCGATCA 60.057 43.478 0.00 0.00 0.00 2.92
261 262 3.256558 TGAGATGTTTGCTGTCGATCAG 58.743 45.455 9.73 9.73 46.12 2.90
262 263 3.056607 TGAGATGTTTGCTGTCGATCAGA 60.057 43.478 16.09 2.62 46.27 3.27
263 264 3.928992 GAGATGTTTGCTGTCGATCAGAA 59.071 43.478 16.09 5.59 46.27 3.02
264 265 3.681897 AGATGTTTGCTGTCGATCAGAAC 59.318 43.478 16.09 12.74 46.27 3.01
265 266 2.143122 TGTTTGCTGTCGATCAGAACC 58.857 47.619 16.09 3.29 46.27 3.62
266 267 2.224281 TGTTTGCTGTCGATCAGAACCT 60.224 45.455 16.09 0.00 46.27 3.50
267 268 2.370281 TTGCTGTCGATCAGAACCTC 57.630 50.000 16.09 2.41 46.27 3.85
268 269 0.532573 TGCTGTCGATCAGAACCTCC 59.467 55.000 16.09 1.86 46.27 4.30
269 270 0.820871 GCTGTCGATCAGAACCTCCT 59.179 55.000 16.09 0.00 46.27 3.69
270 271 1.202359 GCTGTCGATCAGAACCTCCTC 60.202 57.143 16.09 0.00 46.27 3.71
271 272 2.095461 CTGTCGATCAGAACCTCCTCA 58.905 52.381 8.72 0.00 46.27 3.86
272 273 2.692557 CTGTCGATCAGAACCTCCTCAT 59.307 50.000 8.72 0.00 46.27 2.90
273 274 2.428530 TGTCGATCAGAACCTCCTCATG 59.571 50.000 0.00 0.00 0.00 3.07
274 275 2.428890 GTCGATCAGAACCTCCTCATGT 59.571 50.000 0.00 0.00 0.00 3.21
275 276 3.099905 TCGATCAGAACCTCCTCATGTT 58.900 45.455 0.00 0.00 0.00 2.71
276 277 3.118992 TCGATCAGAACCTCCTCATGTTG 60.119 47.826 0.00 0.00 0.00 3.33
277 278 3.118992 CGATCAGAACCTCCTCATGTTGA 60.119 47.826 0.00 0.00 0.00 3.18
278 279 4.621510 CGATCAGAACCTCCTCATGTTGAA 60.622 45.833 0.00 0.00 0.00 2.69
279 280 4.916041 TCAGAACCTCCTCATGTTGAAT 57.084 40.909 0.00 0.00 0.00 2.57
280 281 4.582869 TCAGAACCTCCTCATGTTGAATG 58.417 43.478 0.00 0.00 0.00 2.67
281 282 4.042062 TCAGAACCTCCTCATGTTGAATGT 59.958 41.667 0.00 0.00 0.00 2.71
282 283 4.763793 CAGAACCTCCTCATGTTGAATGTT 59.236 41.667 0.00 0.00 0.00 2.71
283 284 5.242393 CAGAACCTCCTCATGTTGAATGTTT 59.758 40.000 0.00 0.00 0.00 2.83
284 285 5.242393 AGAACCTCCTCATGTTGAATGTTTG 59.758 40.000 0.00 0.00 0.00 2.93
285 286 3.256631 ACCTCCTCATGTTGAATGTTTGC 59.743 43.478 0.00 0.00 0.00 3.68
286 287 3.508793 CCTCCTCATGTTGAATGTTTGCT 59.491 43.478 0.00 0.00 0.00 3.91
287 288 4.482386 CTCCTCATGTTGAATGTTTGCTG 58.518 43.478 0.00 0.00 0.00 4.41
288 289 3.890756 TCCTCATGTTGAATGTTTGCTGT 59.109 39.130 0.00 0.00 0.00 4.40
289 290 5.069318 TCCTCATGTTGAATGTTTGCTGTA 58.931 37.500 0.00 0.00 0.00 2.74
290 291 5.048782 TCCTCATGTTGAATGTTTGCTGTAC 60.049 40.000 0.00 0.00 0.00 2.90
291 292 5.278414 CCTCATGTTGAATGTTTGCTGTACA 60.278 40.000 0.00 0.00 0.00 2.90
292 293 6.141560 TCATGTTGAATGTTTGCTGTACAA 57.858 33.333 0.00 0.00 36.13 2.41
293 294 5.976534 TCATGTTGAATGTTTGCTGTACAAC 59.023 36.000 0.00 0.00 38.23 3.32
294 295 5.574891 TGTTGAATGTTTGCTGTACAACT 57.425 34.783 0.00 0.00 38.23 3.16
295 296 6.685527 TGTTGAATGTTTGCTGTACAACTA 57.314 33.333 0.00 0.00 38.23 2.24
296 297 6.724263 TGTTGAATGTTTGCTGTACAACTAG 58.276 36.000 0.00 0.00 38.23 2.57
297 298 5.356882 TGAATGTTTGCTGTACAACTAGC 57.643 39.130 0.00 0.00 38.23 3.42
303 304 3.961480 TGCTGTACAACTAGCAGTGAT 57.039 42.857 3.57 0.00 44.36 3.06
305 306 5.598416 TGCTGTACAACTAGCAGTGATAT 57.402 39.130 3.57 0.00 44.36 1.63
306 307 5.351458 TGCTGTACAACTAGCAGTGATATG 58.649 41.667 3.57 0.00 44.36 1.78
307 308 5.105351 TGCTGTACAACTAGCAGTGATATGT 60.105 40.000 3.57 0.00 44.36 2.29
308 309 6.096282 TGCTGTACAACTAGCAGTGATATGTA 59.904 38.462 3.57 0.00 44.36 2.29
309 310 6.638873 GCTGTACAACTAGCAGTGATATGTAG 59.361 42.308 0.00 0.00 39.67 2.74
310 311 6.504398 TGTACAACTAGCAGTGATATGTAGC 58.496 40.000 2.81 0.85 0.00 3.58
311 312 5.860941 ACAACTAGCAGTGATATGTAGCT 57.139 39.130 0.00 0.00 39.22 3.32
312 313 6.227298 ACAACTAGCAGTGATATGTAGCTT 57.773 37.500 0.00 0.00 36.80 3.74
313 314 6.045318 ACAACTAGCAGTGATATGTAGCTTG 58.955 40.000 0.00 0.00 36.80 4.01
314 315 6.127338 ACAACTAGCAGTGATATGTAGCTTGA 60.127 38.462 0.00 0.00 36.80 3.02
315 316 6.083098 ACTAGCAGTGATATGTAGCTTGAG 57.917 41.667 0.00 0.00 36.80 3.02
316 317 5.830457 ACTAGCAGTGATATGTAGCTTGAGA 59.170 40.000 0.00 0.00 36.80 3.27
317 318 5.604758 AGCAGTGATATGTAGCTTGAGAA 57.395 39.130 0.00 0.00 29.98 2.87
318 319 5.355596 AGCAGTGATATGTAGCTTGAGAAC 58.644 41.667 0.00 0.00 29.98 3.01
319 320 4.208047 GCAGTGATATGTAGCTTGAGAACG 59.792 45.833 0.00 0.00 0.00 3.95
320 321 5.344066 CAGTGATATGTAGCTTGAGAACGT 58.656 41.667 0.00 0.00 0.00 3.99
321 322 5.230936 CAGTGATATGTAGCTTGAGAACGTG 59.769 44.000 0.00 0.00 0.00 4.49
322 323 5.125578 AGTGATATGTAGCTTGAGAACGTGA 59.874 40.000 0.00 0.00 0.00 4.35
323 324 5.980116 GTGATATGTAGCTTGAGAACGTGAT 59.020 40.000 0.00 0.00 0.00 3.06
324 325 5.979517 TGATATGTAGCTTGAGAACGTGATG 59.020 40.000 0.00 0.00 0.00 3.07
325 326 2.959516 TGTAGCTTGAGAACGTGATGG 58.040 47.619 0.00 0.00 0.00 3.51
326 327 2.299013 TGTAGCTTGAGAACGTGATGGT 59.701 45.455 0.00 0.00 0.00 3.55
327 328 2.550830 AGCTTGAGAACGTGATGGTT 57.449 45.000 0.00 0.00 0.00 3.67
328 329 2.417719 AGCTTGAGAACGTGATGGTTC 58.582 47.619 0.00 0.00 45.19 3.62
338 339 5.858475 GAACGTGATGGTTCTGAATAGTTG 58.142 41.667 0.00 0.00 42.33 3.16
339 340 5.147330 ACGTGATGGTTCTGAATAGTTGA 57.853 39.130 0.00 0.00 0.00 3.18
340 341 5.734720 ACGTGATGGTTCTGAATAGTTGAT 58.265 37.500 0.00 0.00 0.00 2.57
341 342 6.873997 ACGTGATGGTTCTGAATAGTTGATA 58.126 36.000 0.00 0.00 0.00 2.15
342 343 6.757010 ACGTGATGGTTCTGAATAGTTGATAC 59.243 38.462 0.00 0.00 0.00 2.24
343 344 6.201044 CGTGATGGTTCTGAATAGTTGATACC 59.799 42.308 0.00 0.00 0.00 2.73
344 345 7.047891 GTGATGGTTCTGAATAGTTGATACCA 58.952 38.462 0.00 0.00 38.64 3.25
345 346 7.011482 GTGATGGTTCTGAATAGTTGATACCAC 59.989 40.741 0.00 0.00 37.26 4.16
346 347 5.416083 TGGTTCTGAATAGTTGATACCACG 58.584 41.667 0.00 0.00 30.00 4.94
347 348 5.046878 TGGTTCTGAATAGTTGATACCACGT 60.047 40.000 0.00 0.00 30.00 4.49
348 349 5.519206 GGTTCTGAATAGTTGATACCACGTC 59.481 44.000 0.00 0.00 0.00 4.34
349 350 5.907866 TCTGAATAGTTGATACCACGTCA 57.092 39.130 0.00 0.00 0.00 4.35
350 351 6.465439 TCTGAATAGTTGATACCACGTCAT 57.535 37.500 0.00 0.00 0.00 3.06
351 352 7.576861 TCTGAATAGTTGATACCACGTCATA 57.423 36.000 0.00 0.00 0.00 2.15
352 353 8.002984 TCTGAATAGTTGATACCACGTCATAA 57.997 34.615 0.00 0.00 0.00 1.90
353 354 8.135529 TCTGAATAGTTGATACCACGTCATAAG 58.864 37.037 0.00 0.00 0.00 1.73
354 355 6.700081 TGAATAGTTGATACCACGTCATAAGC 59.300 38.462 0.00 0.00 0.00 3.09
355 356 4.737855 AGTTGATACCACGTCATAAGCT 57.262 40.909 0.00 0.00 0.00 3.74
356 357 4.683832 AGTTGATACCACGTCATAAGCTC 58.316 43.478 0.00 0.00 0.00 4.09
357 358 3.728076 TGATACCACGTCATAAGCTCC 57.272 47.619 0.00 0.00 0.00 4.70
358 359 3.028130 TGATACCACGTCATAAGCTCCA 58.972 45.455 0.00 0.00 0.00 3.86
359 360 3.641436 TGATACCACGTCATAAGCTCCAT 59.359 43.478 0.00 0.00 0.00 3.41
360 361 4.100963 TGATACCACGTCATAAGCTCCATT 59.899 41.667 0.00 0.00 0.00 3.16
361 362 2.906354 ACCACGTCATAAGCTCCATTC 58.094 47.619 0.00 0.00 0.00 2.67
362 363 2.501723 ACCACGTCATAAGCTCCATTCT 59.498 45.455 0.00 0.00 0.00 2.40
363 364 2.868583 CCACGTCATAAGCTCCATTCTG 59.131 50.000 0.00 0.00 0.00 3.02
364 365 2.868583 CACGTCATAAGCTCCATTCTGG 59.131 50.000 0.00 0.00 39.43 3.86
365 366 2.158900 ACGTCATAAGCTCCATTCTGGG 60.159 50.000 0.00 0.00 38.32 4.45
366 367 2.158900 CGTCATAAGCTCCATTCTGGGT 60.159 50.000 0.00 0.00 38.32 4.51
367 368 3.069586 CGTCATAAGCTCCATTCTGGGTA 59.930 47.826 0.00 0.00 38.32 3.69
368 369 4.381411 GTCATAAGCTCCATTCTGGGTAC 58.619 47.826 0.00 0.00 38.32 3.34
369 370 4.037222 TCATAAGCTCCATTCTGGGTACA 58.963 43.478 0.00 0.00 38.32 2.90
370 371 2.789409 AAGCTCCATTCTGGGTACAC 57.211 50.000 0.00 0.00 38.32 2.90
371 372 1.656587 AGCTCCATTCTGGGTACACA 58.343 50.000 0.00 0.00 38.32 3.72
372 373 1.985159 AGCTCCATTCTGGGTACACAA 59.015 47.619 0.00 0.00 38.32 3.33
373 374 2.578021 AGCTCCATTCTGGGTACACAAT 59.422 45.455 0.00 0.00 38.32 2.71
374 375 3.010584 AGCTCCATTCTGGGTACACAATT 59.989 43.478 0.00 0.00 38.32 2.32
375 376 4.227300 AGCTCCATTCTGGGTACACAATTA 59.773 41.667 0.00 0.00 38.32 1.40
376 377 5.103940 AGCTCCATTCTGGGTACACAATTAT 60.104 40.000 0.00 0.00 38.32 1.28
377 378 5.594317 GCTCCATTCTGGGTACACAATTATT 59.406 40.000 0.00 0.00 38.32 1.40
378 379 6.460123 GCTCCATTCTGGGTACACAATTATTG 60.460 42.308 0.00 3.07 38.32 1.90
379 380 6.489603 TCCATTCTGGGTACACAATTATTGT 58.510 36.000 4.56 4.56 40.70 2.71
415 416 7.575332 TTTTGAACTTTTCCTTTTGAACTCG 57.425 32.000 0.00 0.00 31.05 4.18
416 417 6.503589 TTGAACTTTTCCTTTTGAACTCGA 57.496 33.333 0.00 0.00 31.05 4.04
417 418 6.693315 TGAACTTTTCCTTTTGAACTCGAT 57.307 33.333 0.00 0.00 31.05 3.59
418 419 7.095695 TGAACTTTTCCTTTTGAACTCGATT 57.904 32.000 0.00 0.00 31.05 3.34
419 420 8.215926 TGAACTTTTCCTTTTGAACTCGATTA 57.784 30.769 0.00 0.00 31.05 1.75
420 421 8.846211 TGAACTTTTCCTTTTGAACTCGATTAT 58.154 29.630 0.00 0.00 31.05 1.28
421 422 9.678941 GAACTTTTCCTTTTGAACTCGATTATT 57.321 29.630 0.00 0.00 31.05 1.40
438 439 9.994432 CTCGATTATTATATTTGCCTTTGATCC 57.006 33.333 0.00 0.00 0.00 3.36
439 440 9.513906 TCGATTATTATATTTGCCTTTGATCCA 57.486 29.630 0.00 0.00 0.00 3.41
458 459 9.958180 TTGATCCAAAGAGTAAGAAATATGACA 57.042 29.630 0.00 0.00 0.00 3.58
459 460 9.383519 TGATCCAAAGAGTAAGAAATATGACAC 57.616 33.333 0.00 0.00 0.00 3.67
460 461 9.383519 GATCCAAAGAGTAAGAAATATGACACA 57.616 33.333 0.00 0.00 0.00 3.72
461 462 8.777865 TCCAAAGAGTAAGAAATATGACACAG 57.222 34.615 0.00 0.00 0.00 3.66
462 463 8.593679 TCCAAAGAGTAAGAAATATGACACAGA 58.406 33.333 0.00 0.00 0.00 3.41
463 464 9.219603 CCAAAGAGTAAGAAATATGACACAGAA 57.780 33.333 0.00 0.00 0.00 3.02
473 474 8.391106 AGAAATATGACACAGAAAATCTAACGC 58.609 33.333 0.00 0.00 0.00 4.84
474 475 7.609760 AATATGACACAGAAAATCTAACGCA 57.390 32.000 0.00 0.00 0.00 5.24
475 476 5.940192 ATGACACAGAAAATCTAACGCAA 57.060 34.783 0.00 0.00 0.00 4.85
476 477 5.090652 TGACACAGAAAATCTAACGCAAC 57.909 39.130 0.00 0.00 0.00 4.17
477 478 4.814234 TGACACAGAAAATCTAACGCAACT 59.186 37.500 0.00 0.00 0.00 3.16
478 479 5.295787 TGACACAGAAAATCTAACGCAACTT 59.704 36.000 0.00 0.00 0.00 2.66
479 480 6.131544 ACACAGAAAATCTAACGCAACTTT 57.868 33.333 0.00 0.00 0.00 2.66
480 481 7.011576 TGACACAGAAAATCTAACGCAACTTTA 59.988 33.333 0.00 0.00 0.00 1.85
481 482 7.699566 ACACAGAAAATCTAACGCAACTTTAA 58.300 30.769 0.00 0.00 0.00 1.52
482 483 7.855904 ACACAGAAAATCTAACGCAACTTTAAG 59.144 33.333 0.00 0.00 0.00 1.85
483 484 6.856426 ACAGAAAATCTAACGCAACTTTAAGC 59.144 34.615 0.00 0.00 0.00 3.09
484 485 6.855914 CAGAAAATCTAACGCAACTTTAAGCA 59.144 34.615 0.00 0.00 0.00 3.91
485 486 7.378461 CAGAAAATCTAACGCAACTTTAAGCAA 59.622 33.333 0.00 0.00 0.00 3.91
486 487 6.986424 AAATCTAACGCAACTTTAAGCAAC 57.014 33.333 0.00 0.00 0.00 4.17
487 488 5.682943 ATCTAACGCAACTTTAAGCAACA 57.317 34.783 0.00 0.00 0.00 3.33
488 489 4.839796 TCTAACGCAACTTTAAGCAACAC 58.160 39.130 0.00 0.00 0.00 3.32
489 490 3.495670 AACGCAACTTTAAGCAACACA 57.504 38.095 0.00 0.00 0.00 3.72
490 491 3.065019 ACGCAACTTTAAGCAACACAG 57.935 42.857 0.00 0.00 0.00 3.66
491 492 1.780860 CGCAACTTTAAGCAACACAGC 59.219 47.619 0.00 0.00 0.00 4.40
492 493 2.127251 GCAACTTTAAGCAACACAGCC 58.873 47.619 0.00 0.00 34.23 4.85
493 494 2.481104 GCAACTTTAAGCAACACAGCCA 60.481 45.455 0.00 0.00 34.23 4.75
494 495 3.779759 CAACTTTAAGCAACACAGCCAA 58.220 40.909 0.00 0.00 34.23 4.52
495 496 3.436700 ACTTTAAGCAACACAGCCAAC 57.563 42.857 0.00 0.00 34.23 3.77
496 497 3.023832 ACTTTAAGCAACACAGCCAACT 58.976 40.909 0.00 0.00 34.23 3.16
497 498 3.447229 ACTTTAAGCAACACAGCCAACTT 59.553 39.130 0.00 0.00 34.23 2.66
498 499 4.642885 ACTTTAAGCAACACAGCCAACTTA 59.357 37.500 0.00 0.00 34.23 2.24
499 500 4.829064 TTAAGCAACACAGCCAACTTAG 57.171 40.909 0.00 0.00 34.23 2.18
500 501 1.609208 AGCAACACAGCCAACTTAGG 58.391 50.000 0.00 0.00 34.23 2.69
501 502 1.133792 AGCAACACAGCCAACTTAGGT 60.134 47.619 0.00 0.00 34.23 3.08
502 503 2.105821 AGCAACACAGCCAACTTAGGTA 59.894 45.455 0.00 0.00 34.23 3.08
503 504 2.225727 GCAACACAGCCAACTTAGGTAC 59.774 50.000 0.00 0.00 0.00 3.34
504 505 3.740115 CAACACAGCCAACTTAGGTACT 58.260 45.455 0.00 0.00 46.37 2.73
505 506 4.801581 GCAACACAGCCAACTTAGGTACTA 60.802 45.833 0.00 0.00 41.75 1.82
506 507 4.532314 ACACAGCCAACTTAGGTACTAC 57.468 45.455 0.00 0.00 42.67 2.73
507 508 3.057033 ACACAGCCAACTTAGGTACTACG 60.057 47.826 0.00 0.00 42.67 3.51
508 509 3.057033 CACAGCCAACTTAGGTACTACGT 60.057 47.826 0.00 0.00 45.56 3.57
509 510 4.156556 CACAGCCAACTTAGGTACTACGTA 59.843 45.833 0.00 0.00 42.74 3.57
510 511 4.156739 ACAGCCAACTTAGGTACTACGTAC 59.843 45.833 0.00 0.00 42.74 3.67
511 512 4.156556 CAGCCAACTTAGGTACTACGTACA 59.843 45.833 6.51 0.00 42.74 2.90
512 513 4.766891 AGCCAACTTAGGTACTACGTACAA 59.233 41.667 6.51 0.00 42.74 2.41
513 514 5.420104 AGCCAACTTAGGTACTACGTACAAT 59.580 40.000 6.51 0.00 42.74 2.71
514 515 5.517770 GCCAACTTAGGTACTACGTACAATG 59.482 44.000 6.51 0.00 42.74 2.82
515 516 6.624423 CCAACTTAGGTACTACGTACAATGT 58.376 40.000 6.51 0.00 42.74 2.71
516 517 6.749118 CCAACTTAGGTACTACGTACAATGTC 59.251 42.308 6.51 0.00 42.74 3.06
517 518 7.362401 CCAACTTAGGTACTACGTACAATGTCT 60.362 40.741 6.51 0.00 42.74 3.41
518 519 7.313951 ACTTAGGTACTACGTACAATGTCTC 57.686 40.000 6.51 0.00 41.73 3.36
519 520 6.317391 ACTTAGGTACTACGTACAATGTCTCC 59.683 42.308 6.51 0.00 41.73 3.71
520 521 4.853007 AGGTACTACGTACAATGTCTCCT 58.147 43.478 6.51 0.00 40.41 3.69
521 522 5.994250 AGGTACTACGTACAATGTCTCCTA 58.006 41.667 6.51 0.00 40.41 2.94
522 523 6.418101 AGGTACTACGTACAATGTCTCCTAA 58.582 40.000 6.51 0.00 40.41 2.69
523 524 6.886459 AGGTACTACGTACAATGTCTCCTAAA 59.114 38.462 6.51 0.00 40.41 1.85
524 525 7.559170 AGGTACTACGTACAATGTCTCCTAAAT 59.441 37.037 6.51 0.00 40.41 1.40
525 526 8.840321 GGTACTACGTACAATGTCTCCTAAATA 58.160 37.037 6.51 0.00 40.41 1.40
531 532 9.962783 ACGTACAATGTCTCCTAAATATAAGTC 57.037 33.333 0.00 0.00 0.00 3.01
544 545 8.362639 CCTAAATATAAGTCTTTGTAGGGCGTA 58.637 37.037 0.00 0.00 0.00 4.42
574 575 3.314331 CACCGAGTCCAGCCTGGT 61.314 66.667 11.27 0.00 39.03 4.00
656 657 1.888512 GATTCTCAAAGCAGCCCACAA 59.111 47.619 0.00 0.00 0.00 3.33
703 704 1.080501 CAGTTTCTCGCGAGCCAGA 60.081 57.895 30.97 11.74 0.00 3.86
810 811 1.679032 GCGTCAAATTAGCCTCACCCT 60.679 52.381 0.00 0.00 0.00 4.34
903 904 0.825425 TCCAGATCTGCGCTAGAGGG 60.825 60.000 17.76 12.45 39.20 4.30
993 1009 1.801332 CCGTCTGGTCGACCTAGTG 59.199 63.158 33.39 22.04 39.56 2.74
1106 1122 5.615925 AAGCTAGGTGTAGGATCGATTTT 57.384 39.130 0.00 0.00 0.00 1.82
1124 1140 2.178912 TTCCACTGAACGAACCATCC 57.821 50.000 0.00 0.00 0.00 3.51
1169 1185 2.301296 CGGATGAGGCTGATAATCCAGT 59.699 50.000 12.83 0.00 38.85 4.00
1172 1188 4.019501 GGATGAGGCTGATAATCCAGTCAT 60.020 45.833 0.00 0.00 41.02 3.06
1274 1290 2.683742 CGCTATGGTCCATTGTTTCCCT 60.684 50.000 10.33 0.00 0.00 4.20
1315 1331 9.911788 ATCCAAAATCTGAACTACATCTACAAT 57.088 29.630 0.00 0.00 0.00 2.71
1361 1377 5.356190 TGGATGCTTAGAATGAAAAGAGCAG 59.644 40.000 0.00 0.00 42.58 4.24
1423 1441 5.352569 GCTGTTACAAGATAGCATCAACACT 59.647 40.000 0.00 0.00 36.24 3.55
1497 1515 3.157087 GGTTCAGGGTCATTCACAACAT 58.843 45.455 0.00 0.00 0.00 2.71
1500 1518 3.411446 TCAGGGTCATTCACAACATGTC 58.589 45.455 0.00 0.00 0.00 3.06
1646 1666 6.183361 CCCAAGATGGTATCCATACTTCAAGA 60.183 42.308 0.99 0.00 45.26 3.02
1675 1695 8.959548 AGCATTGACAATATACACTTTTCATGA 58.040 29.630 0.00 0.00 0.00 3.07
1676 1696 9.740239 GCATTGACAATATACACTTTTCATGAT 57.260 29.630 0.00 0.00 0.00 2.45
1770 1790 5.513788 GGGCAATAGATGGTACTCATGTCAT 60.514 44.000 2.07 0.00 35.97 3.06
1828 1848 1.348036 GGGAGGAAGCACTACACAAGT 59.652 52.381 0.00 0.00 39.81 3.16
1928 1948 3.740832 TGCTAACATTCTCACTGACAACG 59.259 43.478 0.00 0.00 0.00 4.10
1932 1952 3.792401 ACATTCTCACTGACAACGTGAA 58.208 40.909 0.00 0.00 40.53 3.18
1987 2007 4.168101 AGTTCTACCTTGGAGATGTTGGA 58.832 43.478 0.00 0.00 0.00 3.53
2118 2138 4.220821 CAGACACTCCAGCCTTAGAGTAAA 59.779 45.833 0.00 0.00 41.38 2.01
2215 2235 4.040461 ACTCAGGTTAAGCTAGTTCTTGCA 59.960 41.667 6.90 0.00 0.00 4.08
2258 2278 0.918983 CCTCCAGTGGGGCTTTGATA 59.081 55.000 9.92 0.00 36.21 2.15
2331 2351 0.533491 CATGGTGTGGAGGCATTTGG 59.467 55.000 0.00 0.00 0.00 3.28
2364 2384 4.349365 TGGAAGAACAAAAGGTTGGAGTT 58.651 39.130 0.00 0.00 40.63 3.01
2400 2420 2.494059 GCTTAACAGAGGTCAGTGCAA 58.506 47.619 0.00 0.00 0.00 4.08
2436 2456 0.536687 AGAAGAAGCAGCAGCAGCAA 60.537 50.000 12.92 0.00 45.49 3.91
2621 2650 4.256110 CTGGCACTATGTTCAGATTGTGA 58.744 43.478 3.28 0.00 32.70 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.297620 GCAACCAGCCACCACCTG 61.298 66.667 0.00 0.00 37.23 4.00
4 5 3.150903 ATGCAACCAGCCACCACCT 62.151 57.895 0.00 0.00 44.83 4.00
6 7 2.639327 GGATGCAACCAGCCACCAC 61.639 63.158 8.36 0.00 46.75 4.16
7 8 2.283101 GGATGCAACCAGCCACCA 60.283 61.111 8.36 0.00 46.75 4.17
12 13 1.135721 GATTCCAAGGATGCAACCAGC 59.864 52.381 16.21 0.00 45.96 4.85
13 14 1.753073 GGATTCCAAGGATGCAACCAG 59.247 52.381 16.21 7.12 0.00 4.00
14 15 1.358787 AGGATTCCAAGGATGCAACCA 59.641 47.619 16.21 0.00 0.00 3.67
15 16 2.027385 GAGGATTCCAAGGATGCAACC 58.973 52.381 4.51 4.51 0.00 3.77
16 17 2.424956 GTGAGGATTCCAAGGATGCAAC 59.575 50.000 5.29 0.00 0.00 4.17
17 18 2.726821 GTGAGGATTCCAAGGATGCAA 58.273 47.619 5.29 0.00 0.00 4.08
18 19 1.407299 CGTGAGGATTCCAAGGATGCA 60.407 52.381 5.29 0.00 0.00 3.96
19 20 1.303309 CGTGAGGATTCCAAGGATGC 58.697 55.000 5.29 0.00 0.00 3.91
33 34 2.393768 GCATGACCACAGCCGTGAG 61.394 63.158 0.37 0.00 46.80 3.51
34 35 2.358615 GCATGACCACAGCCGTGA 60.359 61.111 0.37 0.00 46.80 4.35
35 36 2.359107 AGCATGACCACAGCCGTG 60.359 61.111 0.00 0.00 43.21 4.94
36 37 2.046892 GAGCATGACCACAGCCGT 60.047 61.111 0.00 0.00 0.00 5.68
37 38 0.108186 TAAGAGCATGACCACAGCCG 60.108 55.000 0.00 0.00 0.00 5.52
38 39 1.661341 CTAAGAGCATGACCACAGCC 58.339 55.000 0.00 0.00 0.00 4.85
39 40 1.012841 GCTAAGAGCATGACCACAGC 58.987 55.000 0.00 0.00 41.89 4.40
40 41 2.168106 AGAGCTAAGAGCATGACCACAG 59.832 50.000 0.00 0.00 45.56 3.66
41 42 2.093816 CAGAGCTAAGAGCATGACCACA 60.094 50.000 0.00 0.00 45.56 4.17
42 43 2.548875 CAGAGCTAAGAGCATGACCAC 58.451 52.381 0.00 0.00 45.56 4.16
43 44 1.483827 CCAGAGCTAAGAGCATGACCA 59.516 52.381 0.00 0.00 45.56 4.02
44 45 1.202627 CCCAGAGCTAAGAGCATGACC 60.203 57.143 0.00 0.00 45.56 4.02
45 46 1.202627 CCCCAGAGCTAAGAGCATGAC 60.203 57.143 0.00 0.00 45.56 3.06
46 47 1.126488 CCCCAGAGCTAAGAGCATGA 58.874 55.000 0.00 0.00 45.56 3.07
47 48 1.070445 CTCCCCAGAGCTAAGAGCATG 59.930 57.143 0.64 0.00 45.56 4.06
48 49 1.062581 TCTCCCCAGAGCTAAGAGCAT 60.063 52.381 0.64 0.00 45.56 3.79
49 50 0.336392 TCTCCCCAGAGCTAAGAGCA 59.664 55.000 0.64 0.00 45.56 4.26
50 51 1.039856 CTCTCCCCAGAGCTAAGAGC 58.960 60.000 0.00 0.00 40.00 4.09
51 52 1.703411 CCTCTCCCCAGAGCTAAGAG 58.297 60.000 0.00 0.00 44.61 2.85
52 53 0.397816 GCCTCTCCCCAGAGCTAAGA 60.398 60.000 0.00 0.00 44.61 2.10
53 54 0.689080 TGCCTCTCCCCAGAGCTAAG 60.689 60.000 0.00 0.00 44.61 2.18
54 55 0.252696 TTGCCTCTCCCCAGAGCTAA 60.253 55.000 0.00 0.00 44.61 3.09
55 56 0.030705 ATTGCCTCTCCCCAGAGCTA 60.031 55.000 0.00 0.00 44.61 3.32
56 57 0.030705 TATTGCCTCTCCCCAGAGCT 60.031 55.000 0.00 0.00 44.61 4.09
57 58 1.063183 ATATTGCCTCTCCCCAGAGC 58.937 55.000 0.00 0.00 44.61 4.09
58 59 3.137176 TCAAATATTGCCTCTCCCCAGAG 59.863 47.826 0.00 0.00 45.44 3.35
59 60 3.122480 TCAAATATTGCCTCTCCCCAGA 58.878 45.455 0.00 0.00 0.00 3.86
60 61 3.582998 TCAAATATTGCCTCTCCCCAG 57.417 47.619 0.00 0.00 0.00 4.45
61 62 3.462954 TGATCAAATATTGCCTCTCCCCA 59.537 43.478 0.00 0.00 0.00 4.96
62 63 4.104383 TGATCAAATATTGCCTCTCCCC 57.896 45.455 0.00 0.00 0.00 4.81
63 64 5.568392 AGATGATCAAATATTGCCTCTCCC 58.432 41.667 0.00 0.00 0.00 4.30
64 65 8.804912 ATTAGATGATCAAATATTGCCTCTCC 57.195 34.615 0.00 0.00 0.00 3.71
68 69 8.834465 GCGATATTAGATGATCAAATATTGCCT 58.166 33.333 24.99 4.81 42.25 4.75
69 70 8.615211 TGCGATATTAGATGATCAAATATTGCC 58.385 33.333 28.48 19.15 44.84 4.52
73 74 8.706936 GCGATGCGATATTAGATGATCAAATAT 58.293 33.333 9.80 9.80 0.00 1.28
74 75 7.169813 GGCGATGCGATATTAGATGATCAAATA 59.830 37.037 0.00 0.00 0.00 1.40
75 76 6.018425 GGCGATGCGATATTAGATGATCAAAT 60.018 38.462 0.00 0.00 0.00 2.32
76 77 5.291858 GGCGATGCGATATTAGATGATCAAA 59.708 40.000 0.00 0.00 0.00 2.69
77 78 4.805719 GGCGATGCGATATTAGATGATCAA 59.194 41.667 0.00 0.00 0.00 2.57
78 79 4.363138 GGCGATGCGATATTAGATGATCA 58.637 43.478 0.00 0.00 0.00 2.92
79 80 3.423536 CGGCGATGCGATATTAGATGATC 59.576 47.826 0.00 0.00 0.00 2.92
80 81 3.066760 TCGGCGATGCGATATTAGATGAT 59.933 43.478 4.99 0.00 0.00 2.45
81 82 2.422127 TCGGCGATGCGATATTAGATGA 59.578 45.455 4.99 0.00 0.00 2.92
82 83 2.797491 TCGGCGATGCGATATTAGATG 58.203 47.619 4.99 0.00 0.00 2.90
83 84 3.316588 AGATCGGCGATGCGATATTAGAT 59.683 43.478 29.20 0.00 0.00 1.98
84 85 2.683362 AGATCGGCGATGCGATATTAGA 59.317 45.455 29.20 0.00 0.00 2.10
85 86 3.071786 AGATCGGCGATGCGATATTAG 57.928 47.619 29.20 0.00 0.00 1.73
86 87 3.179048 CAAGATCGGCGATGCGATATTA 58.821 45.455 29.20 0.00 28.58 0.98
87 88 1.995484 CAAGATCGGCGATGCGATATT 59.005 47.619 29.20 4.03 0.00 1.28
88 89 1.067565 ACAAGATCGGCGATGCGATAT 60.068 47.619 29.20 0.67 0.00 1.63
89 90 0.313987 ACAAGATCGGCGATGCGATA 59.686 50.000 29.20 0.00 0.00 2.92
90 91 0.313987 TACAAGATCGGCGATGCGAT 59.686 50.000 29.20 12.44 0.00 4.58
91 92 0.101579 TTACAAGATCGGCGATGCGA 59.898 50.000 29.20 3.55 0.00 5.10
92 93 0.927537 TTTACAAGATCGGCGATGCG 59.072 50.000 29.20 16.81 0.00 4.73
93 94 1.333258 GCTTTACAAGATCGGCGATGC 60.333 52.381 29.20 17.45 0.00 3.91
94 95 1.933181 TGCTTTACAAGATCGGCGATG 59.067 47.619 29.20 17.45 0.00 3.84
95 96 2.309528 TGCTTTACAAGATCGGCGAT 57.690 45.000 24.26 24.26 0.00 4.58
96 97 2.309528 ATGCTTTACAAGATCGGCGA 57.690 45.000 13.87 13.87 0.00 5.54
97 98 2.863740 TGTATGCTTTACAAGATCGGCG 59.136 45.455 0.00 0.00 0.00 6.46
98 99 4.875544 TTGTATGCTTTACAAGATCGGC 57.124 40.909 8.24 0.00 33.05 5.54
99 100 7.072177 TCTTTTGTATGCTTTACAAGATCGG 57.928 36.000 11.07 0.00 38.47 4.18
100 101 7.217070 GCTTCTTTTGTATGCTTTACAAGATCG 59.783 37.037 11.07 4.85 38.47 3.69
101 102 8.239998 AGCTTCTTTTGTATGCTTTACAAGATC 58.760 33.333 11.07 0.00 38.47 2.75
102 103 8.115490 AGCTTCTTTTGTATGCTTTACAAGAT 57.885 30.769 11.07 0.00 38.47 2.40
103 104 7.228507 TGAGCTTCTTTTGTATGCTTTACAAGA 59.771 33.333 11.07 7.62 38.47 3.02
104 105 7.362662 TGAGCTTCTTTTGTATGCTTTACAAG 58.637 34.615 11.07 3.93 38.47 3.16
105 106 7.270757 TGAGCTTCTTTTGTATGCTTTACAA 57.729 32.000 8.24 8.24 35.84 2.41
106 107 6.875948 TGAGCTTCTTTTGTATGCTTTACA 57.124 33.333 0.00 0.00 33.83 2.41
107 108 7.756558 AGATGAGCTTCTTTTGTATGCTTTAC 58.243 34.615 0.00 0.00 33.83 2.01
108 109 7.928307 AGATGAGCTTCTTTTGTATGCTTTA 57.072 32.000 0.00 0.00 33.83 1.85
109 110 6.830873 AGATGAGCTTCTTTTGTATGCTTT 57.169 33.333 0.00 0.00 33.83 3.51
110 111 6.830873 AAGATGAGCTTCTTTTGTATGCTT 57.169 33.333 0.00 0.00 31.94 3.91
111 112 6.432162 TCAAAGATGAGCTTCTTTTGTATGCT 59.568 34.615 10.13 0.00 41.95 3.79
112 113 6.615088 TCAAAGATGAGCTTCTTTTGTATGC 58.385 36.000 10.13 0.00 41.95 3.14
113 114 8.242053 ACATCAAAGATGAGCTTCTTTTGTATG 58.758 33.333 13.46 15.19 41.95 2.39
114 115 8.345724 ACATCAAAGATGAGCTTCTTTTGTAT 57.654 30.769 13.46 5.79 41.95 2.29
115 116 7.750229 ACATCAAAGATGAGCTTCTTTTGTA 57.250 32.000 13.46 4.20 41.95 2.41
116 117 6.645790 ACATCAAAGATGAGCTTCTTTTGT 57.354 33.333 13.46 10.32 41.95 2.83
117 118 9.073368 CATTACATCAAAGATGAGCTTCTTTTG 57.927 33.333 13.46 9.79 41.95 2.44
118 119 8.800332 ACATTACATCAAAGATGAGCTTCTTTT 58.200 29.630 13.46 0.66 41.95 2.27
119 120 8.242053 CACATTACATCAAAGATGAGCTTCTTT 58.758 33.333 13.46 7.46 44.71 2.52
120 121 7.392673 ACACATTACATCAAAGATGAGCTTCTT 59.607 33.333 13.46 0.00 39.39 2.52
121 122 6.883217 ACACATTACATCAAAGATGAGCTTCT 59.117 34.615 13.46 0.00 39.39 2.85
122 123 7.081526 ACACATTACATCAAAGATGAGCTTC 57.918 36.000 13.46 0.00 39.39 3.86
123 124 8.565896 TTACACATTACATCAAAGATGAGCTT 57.434 30.769 13.46 0.00 39.39 3.74
124 125 8.565896 TTTACACATTACATCAAAGATGAGCT 57.434 30.769 13.46 0.00 39.39 4.09
125 126 9.282247 CTTTTACACATTACATCAAAGATGAGC 57.718 33.333 13.46 0.00 39.39 4.26
128 129 9.345517 CCACTTTTACACATTACATCAAAGATG 57.654 33.333 5.50 5.50 0.00 2.90
129 130 8.028938 GCCACTTTTACACATTACATCAAAGAT 58.971 33.333 0.00 0.00 0.00 2.40
130 131 7.367285 GCCACTTTTACACATTACATCAAAGA 58.633 34.615 0.00 0.00 0.00 2.52
131 132 6.586082 GGCCACTTTTACACATTACATCAAAG 59.414 38.462 0.00 0.00 0.00 2.77
132 133 6.266558 AGGCCACTTTTACACATTACATCAAA 59.733 34.615 5.01 0.00 0.00 2.69
133 134 5.772672 AGGCCACTTTTACACATTACATCAA 59.227 36.000 5.01 0.00 0.00 2.57
134 135 5.182950 CAGGCCACTTTTACACATTACATCA 59.817 40.000 5.01 0.00 0.00 3.07
135 136 5.183140 ACAGGCCACTTTTACACATTACATC 59.817 40.000 5.01 0.00 0.00 3.06
136 137 5.076873 ACAGGCCACTTTTACACATTACAT 58.923 37.500 5.01 0.00 0.00 2.29
137 138 4.465886 ACAGGCCACTTTTACACATTACA 58.534 39.130 5.01 0.00 0.00 2.41
138 139 4.082949 GGACAGGCCACTTTTACACATTAC 60.083 45.833 5.01 0.00 36.34 1.89
139 140 4.076394 GGACAGGCCACTTTTACACATTA 58.924 43.478 5.01 0.00 36.34 1.90
140 141 2.890945 GGACAGGCCACTTTTACACATT 59.109 45.455 5.01 0.00 36.34 2.71
141 142 2.158534 TGGACAGGCCACTTTTACACAT 60.159 45.455 5.01 0.00 43.33 3.21
142 143 1.213182 TGGACAGGCCACTTTTACACA 59.787 47.619 5.01 0.00 43.33 3.72
143 144 1.975660 TGGACAGGCCACTTTTACAC 58.024 50.000 5.01 0.00 43.33 2.90
153 154 1.821332 GTAGCAGCATGGACAGGCC 60.821 63.158 5.23 0.00 39.20 5.19
154 155 0.677731 TTGTAGCAGCATGGACAGGC 60.678 55.000 0.00 0.00 38.58 4.85
155 156 1.741706 CTTTGTAGCAGCATGGACAGG 59.258 52.381 0.00 0.00 35.86 4.00
156 157 2.417933 GACTTTGTAGCAGCATGGACAG 59.582 50.000 0.00 0.00 35.86 3.51
157 158 2.038952 AGACTTTGTAGCAGCATGGACA 59.961 45.455 0.00 0.00 35.86 4.02
158 159 2.704572 AGACTTTGTAGCAGCATGGAC 58.295 47.619 0.00 0.00 35.86 4.02
159 160 3.423539 AAGACTTTGTAGCAGCATGGA 57.576 42.857 0.00 0.00 35.86 3.41
160 161 4.697352 AGTTAAGACTTTGTAGCAGCATGG 59.303 41.667 0.00 0.00 30.40 3.66
161 162 5.409520 TCAGTTAAGACTTTGTAGCAGCATG 59.590 40.000 0.00 0.00 33.97 4.06
162 163 5.551233 TCAGTTAAGACTTTGTAGCAGCAT 58.449 37.500 0.00 0.00 32.54 3.79
163 164 4.956085 TCAGTTAAGACTTTGTAGCAGCA 58.044 39.130 0.00 0.00 32.54 4.41
164 165 7.778470 ATATCAGTTAAGACTTTGTAGCAGC 57.222 36.000 0.00 0.00 32.54 5.25
170 171 9.757227 GCAGATCTATATCAGTTAAGACTTTGT 57.243 33.333 0.00 0.00 34.28 2.83
171 172 8.910666 CGCAGATCTATATCAGTTAAGACTTTG 58.089 37.037 0.00 0.00 34.28 2.77
172 173 7.596995 GCGCAGATCTATATCAGTTAAGACTTT 59.403 37.037 0.30 0.00 34.28 2.66
173 174 7.040062 AGCGCAGATCTATATCAGTTAAGACTT 60.040 37.037 11.47 0.00 34.28 3.01
174 175 6.432783 AGCGCAGATCTATATCAGTTAAGACT 59.567 38.462 11.47 0.00 34.28 3.24
175 176 6.526325 CAGCGCAGATCTATATCAGTTAAGAC 59.474 42.308 11.47 0.00 34.28 3.01
176 177 6.207614 ACAGCGCAGATCTATATCAGTTAAGA 59.792 38.462 11.47 0.00 34.28 2.10
177 178 6.385843 ACAGCGCAGATCTATATCAGTTAAG 58.614 40.000 11.47 0.00 34.28 1.85
178 179 6.332735 ACAGCGCAGATCTATATCAGTTAA 57.667 37.500 11.47 0.00 34.28 2.01
179 180 5.966742 ACAGCGCAGATCTATATCAGTTA 57.033 39.130 11.47 0.00 34.28 2.24
180 181 4.862902 ACAGCGCAGATCTATATCAGTT 57.137 40.909 11.47 0.00 34.28 3.16
181 182 4.397730 CCTACAGCGCAGATCTATATCAGT 59.602 45.833 11.47 0.00 34.28 3.41
182 183 4.637977 TCCTACAGCGCAGATCTATATCAG 59.362 45.833 11.47 0.00 34.28 2.90
183 184 4.589908 TCCTACAGCGCAGATCTATATCA 58.410 43.478 11.47 0.00 34.28 2.15
184 185 5.766150 ATCCTACAGCGCAGATCTATATC 57.234 43.478 11.47 0.00 0.00 1.63
185 186 5.420421 ACAATCCTACAGCGCAGATCTATAT 59.580 40.000 11.47 0.00 0.00 0.86
186 187 4.767409 ACAATCCTACAGCGCAGATCTATA 59.233 41.667 11.47 0.00 0.00 1.31
187 188 3.576118 ACAATCCTACAGCGCAGATCTAT 59.424 43.478 11.47 0.00 0.00 1.98
188 189 2.959030 ACAATCCTACAGCGCAGATCTA 59.041 45.455 11.47 0.00 0.00 1.98
189 190 1.759445 ACAATCCTACAGCGCAGATCT 59.241 47.619 11.47 0.00 0.00 2.75
190 191 2.231215 ACAATCCTACAGCGCAGATC 57.769 50.000 11.47 0.00 0.00 2.75
191 192 2.036475 CCTACAATCCTACAGCGCAGAT 59.964 50.000 11.47 0.15 0.00 2.90
192 193 1.409064 CCTACAATCCTACAGCGCAGA 59.591 52.381 11.47 0.00 0.00 4.26
193 194 1.137086 ACCTACAATCCTACAGCGCAG 59.863 52.381 11.47 3.33 0.00 5.18
194 195 1.136305 GACCTACAATCCTACAGCGCA 59.864 52.381 11.47 0.00 0.00 6.09
195 196 1.854227 GACCTACAATCCTACAGCGC 58.146 55.000 0.00 0.00 0.00 5.92
196 197 1.404391 ACGACCTACAATCCTACAGCG 59.596 52.381 0.00 0.00 0.00 5.18
197 198 3.550436 GCTACGACCTACAATCCTACAGC 60.550 52.174 0.00 0.00 0.00 4.40
198 199 3.884091 AGCTACGACCTACAATCCTACAG 59.116 47.826 0.00 0.00 0.00 2.74
199 200 3.894759 AGCTACGACCTACAATCCTACA 58.105 45.455 0.00 0.00 0.00 2.74
200 201 4.337555 TGAAGCTACGACCTACAATCCTAC 59.662 45.833 0.00 0.00 0.00 3.18
201 202 4.529897 TGAAGCTACGACCTACAATCCTA 58.470 43.478 0.00 0.00 0.00 2.94
202 203 3.362706 TGAAGCTACGACCTACAATCCT 58.637 45.455 0.00 0.00 0.00 3.24
203 204 3.130693 ACTGAAGCTACGACCTACAATCC 59.869 47.826 0.00 0.00 0.00 3.01
204 205 4.373348 ACTGAAGCTACGACCTACAATC 57.627 45.455 0.00 0.00 0.00 2.67
205 206 4.495422 CAACTGAAGCTACGACCTACAAT 58.505 43.478 0.00 0.00 0.00 2.71
206 207 3.305813 CCAACTGAAGCTACGACCTACAA 60.306 47.826 0.00 0.00 0.00 2.41
207 208 2.230508 CCAACTGAAGCTACGACCTACA 59.769 50.000 0.00 0.00 0.00 2.74
208 209 2.230750 ACCAACTGAAGCTACGACCTAC 59.769 50.000 0.00 0.00 0.00 3.18
209 210 2.230508 CACCAACTGAAGCTACGACCTA 59.769 50.000 0.00 0.00 0.00 3.08
210 211 1.000955 CACCAACTGAAGCTACGACCT 59.999 52.381 0.00 0.00 0.00 3.85
211 212 1.429463 CACCAACTGAAGCTACGACC 58.571 55.000 0.00 0.00 0.00 4.79
212 213 0.790814 GCACCAACTGAAGCTACGAC 59.209 55.000 0.00 0.00 0.00 4.34
213 214 0.679505 AGCACCAACTGAAGCTACGA 59.320 50.000 0.00 0.00 35.19 3.43
214 215 0.792640 CAGCACCAACTGAAGCTACG 59.207 55.000 0.00 0.00 40.25 3.51
215 216 1.884235 ACAGCACCAACTGAAGCTAC 58.116 50.000 0.00 0.00 40.25 3.58
216 217 3.762407 TTACAGCACCAACTGAAGCTA 57.238 42.857 0.00 0.00 40.25 3.32
217 218 2.638480 TTACAGCACCAACTGAAGCT 57.362 45.000 0.00 0.00 40.25 3.74
218 219 3.503748 AGATTTACAGCACCAACTGAAGC 59.496 43.478 0.00 0.00 40.25 3.86
219 220 4.756642 TCAGATTTACAGCACCAACTGAAG 59.243 41.667 0.00 0.00 40.25 3.02
220 221 4.713553 TCAGATTTACAGCACCAACTGAA 58.286 39.130 0.00 0.00 40.25 3.02
221 222 4.040339 TCTCAGATTTACAGCACCAACTGA 59.960 41.667 0.00 0.00 40.25 3.41
222 223 4.318332 TCTCAGATTTACAGCACCAACTG 58.682 43.478 0.00 0.00 43.59 3.16
223 224 4.623932 TCTCAGATTTACAGCACCAACT 57.376 40.909 0.00 0.00 0.00 3.16
224 225 4.697352 ACATCTCAGATTTACAGCACCAAC 59.303 41.667 0.00 0.00 0.00 3.77
225 226 4.910195 ACATCTCAGATTTACAGCACCAA 58.090 39.130 0.00 0.00 0.00 3.67
226 227 4.558226 ACATCTCAGATTTACAGCACCA 57.442 40.909 0.00 0.00 0.00 4.17
227 228 5.634896 CAAACATCTCAGATTTACAGCACC 58.365 41.667 0.00 0.00 0.00 5.01
228 229 5.091431 GCAAACATCTCAGATTTACAGCAC 58.909 41.667 0.00 0.00 0.00 4.40
229 230 5.005740 AGCAAACATCTCAGATTTACAGCA 58.994 37.500 0.00 0.00 0.00 4.41
230 231 5.106396 ACAGCAAACATCTCAGATTTACAGC 60.106 40.000 0.00 0.00 0.00 4.40
231 232 6.492007 ACAGCAAACATCTCAGATTTACAG 57.508 37.500 0.00 0.00 0.00 2.74
232 233 5.120674 CGACAGCAAACATCTCAGATTTACA 59.879 40.000 0.00 0.00 0.00 2.41
233 234 5.348724 TCGACAGCAAACATCTCAGATTTAC 59.651 40.000 0.00 0.00 0.00 2.01
234 235 5.478407 TCGACAGCAAACATCTCAGATTTA 58.522 37.500 0.00 0.00 0.00 1.40
235 236 4.318332 TCGACAGCAAACATCTCAGATTT 58.682 39.130 0.00 0.00 0.00 2.17
236 237 3.930336 TCGACAGCAAACATCTCAGATT 58.070 40.909 0.00 0.00 0.00 2.40
237 238 3.599730 TCGACAGCAAACATCTCAGAT 57.400 42.857 0.00 0.00 0.00 2.90
238 239 3.056607 TGATCGACAGCAAACATCTCAGA 60.057 43.478 0.00 0.00 0.00 3.27
239 240 3.256558 TGATCGACAGCAAACATCTCAG 58.743 45.455 0.00 0.00 0.00 3.35
240 241 3.056607 TCTGATCGACAGCAAACATCTCA 60.057 43.478 9.34 0.00 45.38 3.27
241 242 3.515630 TCTGATCGACAGCAAACATCTC 58.484 45.455 9.34 0.00 45.38 2.75
242 243 3.599730 TCTGATCGACAGCAAACATCT 57.400 42.857 9.34 0.00 45.38 2.90
243 244 3.181516 GGTTCTGATCGACAGCAAACATC 60.182 47.826 15.00 0.00 45.38 3.06
244 245 2.744202 GGTTCTGATCGACAGCAAACAT 59.256 45.455 15.00 0.00 45.38 2.71
245 246 2.143122 GGTTCTGATCGACAGCAAACA 58.857 47.619 15.00 0.00 45.38 2.83
246 247 2.413453 GAGGTTCTGATCGACAGCAAAC 59.587 50.000 9.34 9.28 45.38 2.93
247 248 2.612972 GGAGGTTCTGATCGACAGCAAA 60.613 50.000 9.34 0.00 45.38 3.68
248 249 1.066858 GGAGGTTCTGATCGACAGCAA 60.067 52.381 9.34 4.10 45.38 3.91
249 250 0.532573 GGAGGTTCTGATCGACAGCA 59.467 55.000 9.34 0.00 45.38 4.41
250 251 0.820871 AGGAGGTTCTGATCGACAGC 59.179 55.000 9.34 0.00 45.38 4.40
251 252 2.095461 TGAGGAGGTTCTGATCGACAG 58.905 52.381 8.24 8.24 46.97 3.51
252 253 2.215942 TGAGGAGGTTCTGATCGACA 57.784 50.000 0.00 0.00 0.00 4.35
253 254 2.428890 ACATGAGGAGGTTCTGATCGAC 59.571 50.000 0.00 0.00 0.00 4.20
254 255 2.739943 ACATGAGGAGGTTCTGATCGA 58.260 47.619 0.00 0.00 0.00 3.59
255 256 3.118992 TCAACATGAGGAGGTTCTGATCG 60.119 47.826 0.00 0.00 0.00 3.69
256 257 4.478206 TCAACATGAGGAGGTTCTGATC 57.522 45.455 0.00 0.00 0.00 2.92
257 258 4.916041 TTCAACATGAGGAGGTTCTGAT 57.084 40.909 0.00 0.00 0.00 2.90
258 259 4.042062 ACATTCAACATGAGGAGGTTCTGA 59.958 41.667 0.00 0.00 0.00 3.27
259 260 4.330250 ACATTCAACATGAGGAGGTTCTG 58.670 43.478 0.00 0.00 0.00 3.02
260 261 4.647564 ACATTCAACATGAGGAGGTTCT 57.352 40.909 0.00 0.00 0.00 3.01
261 262 5.464168 CAAACATTCAACATGAGGAGGTTC 58.536 41.667 0.00 0.00 0.00 3.62
262 263 4.262164 GCAAACATTCAACATGAGGAGGTT 60.262 41.667 0.00 0.00 0.00 3.50
263 264 3.256631 GCAAACATTCAACATGAGGAGGT 59.743 43.478 0.00 0.00 0.00 3.85
264 265 3.508793 AGCAAACATTCAACATGAGGAGG 59.491 43.478 0.00 0.00 0.00 4.30
265 266 4.022589 ACAGCAAACATTCAACATGAGGAG 60.023 41.667 0.00 0.00 0.00 3.69
266 267 3.890756 ACAGCAAACATTCAACATGAGGA 59.109 39.130 0.00 0.00 0.00 3.71
267 268 4.247267 ACAGCAAACATTCAACATGAGG 57.753 40.909 0.00 0.00 0.00 3.86
268 269 5.761003 TGTACAGCAAACATTCAACATGAG 58.239 37.500 0.00 0.00 0.00 2.90
269 270 5.764487 TGTACAGCAAACATTCAACATGA 57.236 34.783 0.00 0.00 0.00 3.07
270 271 5.978919 AGTTGTACAGCAAACATTCAACATG 59.021 36.000 12.54 0.00 39.03 3.21
271 272 6.147864 AGTTGTACAGCAAACATTCAACAT 57.852 33.333 12.54 0.00 39.03 2.71
272 273 5.574891 AGTTGTACAGCAAACATTCAACA 57.425 34.783 12.54 0.00 39.03 3.33
273 274 5.625311 GCTAGTTGTACAGCAAACATTCAAC 59.375 40.000 12.54 0.00 39.03 3.18
274 275 5.298026 TGCTAGTTGTACAGCAAACATTCAA 59.702 36.000 12.54 0.00 44.49 2.69
275 276 4.819088 TGCTAGTTGTACAGCAAACATTCA 59.181 37.500 12.54 0.00 44.49 2.57
276 277 5.049405 ACTGCTAGTTGTACAGCAAACATTC 60.049 40.000 12.54 0.00 46.55 2.67
277 278 4.821805 ACTGCTAGTTGTACAGCAAACATT 59.178 37.500 12.54 0.00 46.55 2.71
278 279 4.214119 CACTGCTAGTTGTACAGCAAACAT 59.786 41.667 12.54 0.00 46.55 2.71
279 280 3.559655 CACTGCTAGTTGTACAGCAAACA 59.440 43.478 12.54 5.58 46.55 2.83
280 281 3.807622 TCACTGCTAGTTGTACAGCAAAC 59.192 43.478 12.54 0.00 46.55 2.93
281 282 4.066646 TCACTGCTAGTTGTACAGCAAA 57.933 40.909 12.54 0.00 46.55 3.68
282 283 3.744238 TCACTGCTAGTTGTACAGCAA 57.256 42.857 12.54 0.00 46.55 3.91
283 284 3.961480 ATCACTGCTAGTTGTACAGCA 57.039 42.857 12.54 9.68 45.23 4.41
284 285 5.352284 ACATATCACTGCTAGTTGTACAGC 58.648 41.667 0.72 0.72 38.31 4.40
285 286 6.638873 GCTACATATCACTGCTAGTTGTACAG 59.361 42.308 0.00 0.00 37.45 2.74
286 287 6.321435 AGCTACATATCACTGCTAGTTGTACA 59.679 38.462 0.00 0.00 31.71 2.90
287 288 6.740110 AGCTACATATCACTGCTAGTTGTAC 58.260 40.000 0.00 0.00 31.71 2.90
288 289 6.961360 AGCTACATATCACTGCTAGTTGTA 57.039 37.500 0.00 0.00 31.71 2.41
289 290 5.860941 AGCTACATATCACTGCTAGTTGT 57.139 39.130 0.00 0.00 31.71 3.32
290 291 6.276091 TCAAGCTACATATCACTGCTAGTTG 58.724 40.000 0.00 0.00 33.28 3.16
291 292 6.322456 TCTCAAGCTACATATCACTGCTAGTT 59.678 38.462 0.00 0.00 33.28 2.24
292 293 5.830457 TCTCAAGCTACATATCACTGCTAGT 59.170 40.000 0.00 0.00 33.28 2.57
293 294 6.324561 TCTCAAGCTACATATCACTGCTAG 57.675 41.667 0.00 0.00 33.28 3.42
294 295 6.507900 GTTCTCAAGCTACATATCACTGCTA 58.492 40.000 0.00 0.00 33.28 3.49
295 296 5.355596 GTTCTCAAGCTACATATCACTGCT 58.644 41.667 0.00 0.00 35.30 4.24
296 297 4.208047 CGTTCTCAAGCTACATATCACTGC 59.792 45.833 0.00 0.00 0.00 4.40
297 298 5.230936 CACGTTCTCAAGCTACATATCACTG 59.769 44.000 0.00 0.00 0.00 3.66
298 299 5.125578 TCACGTTCTCAAGCTACATATCACT 59.874 40.000 0.00 0.00 0.00 3.41
299 300 5.340803 TCACGTTCTCAAGCTACATATCAC 58.659 41.667 0.00 0.00 0.00 3.06
300 301 5.576447 TCACGTTCTCAAGCTACATATCA 57.424 39.130 0.00 0.00 0.00 2.15
301 302 5.403766 CCATCACGTTCTCAAGCTACATATC 59.596 44.000 0.00 0.00 0.00 1.63
302 303 5.163405 ACCATCACGTTCTCAAGCTACATAT 60.163 40.000 0.00 0.00 0.00 1.78
303 304 4.159693 ACCATCACGTTCTCAAGCTACATA 59.840 41.667 0.00 0.00 0.00 2.29
304 305 3.055819 ACCATCACGTTCTCAAGCTACAT 60.056 43.478 0.00 0.00 0.00 2.29
305 306 2.299013 ACCATCACGTTCTCAAGCTACA 59.701 45.455 0.00 0.00 0.00 2.74
306 307 2.960819 ACCATCACGTTCTCAAGCTAC 58.039 47.619 0.00 0.00 0.00 3.58
307 308 3.585862 GAACCATCACGTTCTCAAGCTA 58.414 45.455 0.00 0.00 39.27 3.32
308 309 2.417719 GAACCATCACGTTCTCAAGCT 58.582 47.619 0.00 0.00 39.27 3.74
309 310 2.882742 GAACCATCACGTTCTCAAGC 57.117 50.000 0.00 0.00 39.27 4.01
315 316 5.637810 TCAACTATTCAGAACCATCACGTTC 59.362 40.000 0.00 0.00 42.08 3.95
316 317 5.547465 TCAACTATTCAGAACCATCACGTT 58.453 37.500 0.00 0.00 0.00 3.99
317 318 5.147330 TCAACTATTCAGAACCATCACGT 57.853 39.130 0.00 0.00 0.00 4.49
318 319 6.201044 GGTATCAACTATTCAGAACCATCACG 59.799 42.308 0.00 0.00 0.00 4.35
319 320 7.011482 GTGGTATCAACTATTCAGAACCATCAC 59.989 40.741 0.00 0.00 38.01 3.06
320 321 7.047891 GTGGTATCAACTATTCAGAACCATCA 58.952 38.462 0.00 0.00 38.01 3.07
321 322 6.201044 CGTGGTATCAACTATTCAGAACCATC 59.799 42.308 0.00 0.00 38.01 3.51
322 323 6.049149 CGTGGTATCAACTATTCAGAACCAT 58.951 40.000 0.00 0.00 38.01 3.55
323 324 5.046878 ACGTGGTATCAACTATTCAGAACCA 60.047 40.000 0.00 0.00 33.53 3.67
324 325 5.416947 ACGTGGTATCAACTATTCAGAACC 58.583 41.667 0.00 0.00 0.00 3.62
325 326 6.097356 TGACGTGGTATCAACTATTCAGAAC 58.903 40.000 0.00 0.00 0.00 3.01
326 327 6.275494 TGACGTGGTATCAACTATTCAGAA 57.725 37.500 0.00 0.00 0.00 3.02
327 328 5.907866 TGACGTGGTATCAACTATTCAGA 57.092 39.130 0.00 0.00 0.00 3.27
328 329 7.096023 GCTTATGACGTGGTATCAACTATTCAG 60.096 40.741 0.00 0.00 0.00 3.02
329 330 6.700081 GCTTATGACGTGGTATCAACTATTCA 59.300 38.462 0.00 0.00 0.00 2.57
330 331 6.924060 AGCTTATGACGTGGTATCAACTATTC 59.076 38.462 0.00 0.00 0.00 1.75
331 332 6.817184 AGCTTATGACGTGGTATCAACTATT 58.183 36.000 0.00 0.00 0.00 1.73
332 333 6.406692 AGCTTATGACGTGGTATCAACTAT 57.593 37.500 0.00 0.00 0.00 2.12
333 334 5.221185 GGAGCTTATGACGTGGTATCAACTA 60.221 44.000 0.00 0.00 0.00 2.24
334 335 4.441634 GGAGCTTATGACGTGGTATCAACT 60.442 45.833 0.00 0.00 0.00 3.16
335 336 3.802685 GGAGCTTATGACGTGGTATCAAC 59.197 47.826 0.00 0.00 0.00 3.18
336 337 3.449377 TGGAGCTTATGACGTGGTATCAA 59.551 43.478 0.00 0.00 0.00 2.57
337 338 3.028130 TGGAGCTTATGACGTGGTATCA 58.972 45.455 0.00 0.00 0.00 2.15
338 339 3.728076 TGGAGCTTATGACGTGGTATC 57.272 47.619 0.00 0.00 0.00 2.24
339 340 4.345257 AGAATGGAGCTTATGACGTGGTAT 59.655 41.667 0.00 0.00 0.00 2.73
340 341 3.704566 AGAATGGAGCTTATGACGTGGTA 59.295 43.478 0.00 0.00 0.00 3.25
341 342 2.501723 AGAATGGAGCTTATGACGTGGT 59.498 45.455 0.00 0.00 0.00 4.16
342 343 2.868583 CAGAATGGAGCTTATGACGTGG 59.131 50.000 0.00 0.00 0.00 4.94
390 391 7.868415 TCGAGTTCAAAAGGAAAAGTTCAAAAA 59.132 29.630 0.00 0.00 37.23 1.94
391 392 7.371936 TCGAGTTCAAAAGGAAAAGTTCAAAA 58.628 30.769 0.00 0.00 37.23 2.44
392 393 6.915349 TCGAGTTCAAAAGGAAAAGTTCAAA 58.085 32.000 0.00 0.00 37.23 2.69
393 394 6.503589 TCGAGTTCAAAAGGAAAAGTTCAA 57.496 33.333 0.00 0.00 37.23 2.69
394 395 6.693315 ATCGAGTTCAAAAGGAAAAGTTCA 57.307 33.333 0.00 0.00 37.23 3.18
395 396 9.678941 AATAATCGAGTTCAAAAGGAAAAGTTC 57.321 29.630 0.00 0.00 37.23 3.01
412 413 9.994432 GGATCAAAGGCAAATATAATAATCGAG 57.006 33.333 0.00 0.00 0.00 4.04
413 414 9.513906 TGGATCAAAGGCAAATATAATAATCGA 57.486 29.630 0.00 0.00 0.00 3.59
432 433 9.958180 TGTCATATTTCTTACTCTTTGGATCAA 57.042 29.630 0.00 0.00 0.00 2.57
433 434 9.383519 GTGTCATATTTCTTACTCTTTGGATCA 57.616 33.333 0.00 0.00 0.00 2.92
434 435 9.383519 TGTGTCATATTTCTTACTCTTTGGATC 57.616 33.333 0.00 0.00 0.00 3.36
435 436 9.388506 CTGTGTCATATTTCTTACTCTTTGGAT 57.611 33.333 0.00 0.00 0.00 3.41
436 437 8.593679 TCTGTGTCATATTTCTTACTCTTTGGA 58.406 33.333 0.00 0.00 0.00 3.53
437 438 8.777865 TCTGTGTCATATTTCTTACTCTTTGG 57.222 34.615 0.00 0.00 0.00 3.28
447 448 8.391106 GCGTTAGATTTTCTGTGTCATATTTCT 58.609 33.333 0.00 0.00 0.00 2.52
448 449 8.175069 TGCGTTAGATTTTCTGTGTCATATTTC 58.825 33.333 0.00 0.00 0.00 2.17
449 450 8.039603 TGCGTTAGATTTTCTGTGTCATATTT 57.960 30.769 0.00 0.00 0.00 1.40
450 451 7.609760 TGCGTTAGATTTTCTGTGTCATATT 57.390 32.000 0.00 0.00 0.00 1.28
451 452 7.334421 AGTTGCGTTAGATTTTCTGTGTCATAT 59.666 33.333 0.00 0.00 0.00 1.78
452 453 6.649141 AGTTGCGTTAGATTTTCTGTGTCATA 59.351 34.615 0.00 0.00 0.00 2.15
453 454 5.470098 AGTTGCGTTAGATTTTCTGTGTCAT 59.530 36.000 0.00 0.00 0.00 3.06
454 455 4.814234 AGTTGCGTTAGATTTTCTGTGTCA 59.186 37.500 0.00 0.00 0.00 3.58
455 456 5.344207 AGTTGCGTTAGATTTTCTGTGTC 57.656 39.130 0.00 0.00 0.00 3.67
456 457 5.751243 AAGTTGCGTTAGATTTTCTGTGT 57.249 34.783 0.00 0.00 0.00 3.72
457 458 7.149128 GCTTAAAGTTGCGTTAGATTTTCTGTG 60.149 37.037 0.00 0.00 0.00 3.66
458 459 6.856426 GCTTAAAGTTGCGTTAGATTTTCTGT 59.144 34.615 0.00 0.00 0.00 3.41
459 460 6.855914 TGCTTAAAGTTGCGTTAGATTTTCTG 59.144 34.615 0.00 0.00 0.00 3.02
460 461 6.966021 TGCTTAAAGTTGCGTTAGATTTTCT 58.034 32.000 0.00 0.00 0.00 2.52
461 462 7.166804 TGTTGCTTAAAGTTGCGTTAGATTTTC 59.833 33.333 0.00 0.00 0.00 2.29
462 463 6.975772 TGTTGCTTAAAGTTGCGTTAGATTTT 59.024 30.769 0.00 0.00 0.00 1.82
463 464 6.416750 GTGTTGCTTAAAGTTGCGTTAGATTT 59.583 34.615 0.00 0.00 0.00 2.17
464 465 5.912955 GTGTTGCTTAAAGTTGCGTTAGATT 59.087 36.000 0.00 0.00 0.00 2.40
465 466 5.008217 TGTGTTGCTTAAAGTTGCGTTAGAT 59.992 36.000 0.00 0.00 0.00 1.98
466 467 4.333095 TGTGTTGCTTAAAGTTGCGTTAGA 59.667 37.500 0.00 0.00 0.00 2.10
467 468 4.593157 TGTGTTGCTTAAAGTTGCGTTAG 58.407 39.130 0.00 0.00 0.00 2.34
468 469 4.593157 CTGTGTTGCTTAAAGTTGCGTTA 58.407 39.130 0.00 0.00 0.00 3.18
469 470 3.434637 CTGTGTTGCTTAAAGTTGCGTT 58.565 40.909 0.00 0.00 0.00 4.84
470 471 2.794631 GCTGTGTTGCTTAAAGTTGCGT 60.795 45.455 0.00 0.00 0.00 5.24
471 472 1.780860 GCTGTGTTGCTTAAAGTTGCG 59.219 47.619 0.00 0.00 0.00 4.85
472 473 2.127251 GGCTGTGTTGCTTAAAGTTGC 58.873 47.619 0.00 0.00 0.00 4.17
473 474 3.435105 TGGCTGTGTTGCTTAAAGTTG 57.565 42.857 0.00 0.00 0.00 3.16
474 475 3.447229 AGTTGGCTGTGTTGCTTAAAGTT 59.553 39.130 0.00 0.00 0.00 2.66
475 476 3.023832 AGTTGGCTGTGTTGCTTAAAGT 58.976 40.909 0.00 0.00 0.00 2.66
476 477 3.715628 AGTTGGCTGTGTTGCTTAAAG 57.284 42.857 0.00 0.00 0.00 1.85
477 478 4.037446 CCTAAGTTGGCTGTGTTGCTTAAA 59.963 41.667 0.00 0.00 0.00 1.52
478 479 3.568007 CCTAAGTTGGCTGTGTTGCTTAA 59.432 43.478 0.00 0.00 0.00 1.85
479 480 3.146066 CCTAAGTTGGCTGTGTTGCTTA 58.854 45.455 0.00 0.00 0.00 3.09
480 481 1.956477 CCTAAGTTGGCTGTGTTGCTT 59.044 47.619 0.00 0.00 0.00 3.91
481 482 1.133792 ACCTAAGTTGGCTGTGTTGCT 60.134 47.619 0.00 0.00 0.00 3.91
482 483 1.318576 ACCTAAGTTGGCTGTGTTGC 58.681 50.000 0.00 0.00 0.00 4.17
483 484 3.740115 AGTACCTAAGTTGGCTGTGTTG 58.260 45.455 0.00 0.00 0.00 3.33
484 485 4.560108 CGTAGTACCTAAGTTGGCTGTGTT 60.560 45.833 0.00 0.00 0.00 3.32
485 486 3.057033 CGTAGTACCTAAGTTGGCTGTGT 60.057 47.826 0.00 0.00 0.00 3.72
486 487 3.057033 ACGTAGTACCTAAGTTGGCTGTG 60.057 47.826 0.00 0.00 41.94 3.66
487 488 3.160269 ACGTAGTACCTAAGTTGGCTGT 58.840 45.455 0.00 0.00 41.94 4.40
488 489 3.863142 ACGTAGTACCTAAGTTGGCTG 57.137 47.619 0.00 0.00 41.94 4.85
505 506 9.962783 GACTTATATTTAGGAGACATTGTACGT 57.037 33.333 0.00 0.00 0.00 3.57
514 515 9.984190 CCCTACAAAGACTTATATTTAGGAGAC 57.016 37.037 0.00 0.00 0.00 3.36
515 516 8.648693 GCCCTACAAAGACTTATATTTAGGAGA 58.351 37.037 0.00 0.00 0.00 3.71
516 517 7.599245 CGCCCTACAAAGACTTATATTTAGGAG 59.401 40.741 0.00 0.00 0.00 3.69
517 518 7.070322 ACGCCCTACAAAGACTTATATTTAGGA 59.930 37.037 0.00 0.00 0.00 2.94
518 519 7.215085 ACGCCCTACAAAGACTTATATTTAGG 58.785 38.462 0.00 0.00 0.00 2.69
519 520 9.924650 ATACGCCCTACAAAGACTTATATTTAG 57.075 33.333 0.00 0.00 0.00 1.85
521 522 9.623000 AAATACGCCCTACAAAGACTTATATTT 57.377 29.630 0.00 0.00 0.00 1.40
522 523 9.052759 CAAATACGCCCTACAAAGACTTATATT 57.947 33.333 0.00 0.00 0.00 1.28
523 524 7.660208 CCAAATACGCCCTACAAAGACTTATAT 59.340 37.037 0.00 0.00 0.00 0.86
524 525 6.987992 CCAAATACGCCCTACAAAGACTTATA 59.012 38.462 0.00 0.00 0.00 0.98
525 526 5.820947 CCAAATACGCCCTACAAAGACTTAT 59.179 40.000 0.00 0.00 0.00 1.73
526 527 5.180271 CCAAATACGCCCTACAAAGACTTA 58.820 41.667 0.00 0.00 0.00 2.24
527 528 4.007659 CCAAATACGCCCTACAAAGACTT 58.992 43.478 0.00 0.00 0.00 3.01
528 529 3.008704 ACCAAATACGCCCTACAAAGACT 59.991 43.478 0.00 0.00 0.00 3.24
529 530 3.340928 ACCAAATACGCCCTACAAAGAC 58.659 45.455 0.00 0.00 0.00 3.01
530 531 3.706600 ACCAAATACGCCCTACAAAGA 57.293 42.857 0.00 0.00 0.00 2.52
531 532 3.672241 GCAACCAAATACGCCCTACAAAG 60.672 47.826 0.00 0.00 0.00 2.77
532 533 2.229302 GCAACCAAATACGCCCTACAAA 59.771 45.455 0.00 0.00 0.00 2.83
533 534 1.813786 GCAACCAAATACGCCCTACAA 59.186 47.619 0.00 0.00 0.00 2.41
534 535 1.455248 GCAACCAAATACGCCCTACA 58.545 50.000 0.00 0.00 0.00 2.74
535 536 0.736636 GGCAACCAAATACGCCCTAC 59.263 55.000 0.00 0.00 38.67 3.18
574 575 4.056584 TCTCCCTTCCCGCTCGGA 62.057 66.667 10.28 0.00 39.68 4.55
656 657 2.032681 GTTTCCAGCGAGCCAGGT 59.967 61.111 4.47 0.00 0.00 4.00
788 789 1.448985 GTGAGGCTAATTTGACGCCA 58.551 50.000 2.12 0.15 46.14 5.69
810 811 1.266178 TGGATGAGCGAGTGAAAGGA 58.734 50.000 0.00 0.00 0.00 3.36
936 952 2.745884 CCAGATCCGCCGCAAACA 60.746 61.111 0.00 0.00 0.00 2.83
1106 1122 1.052617 TGGATGGTTCGTTCAGTGGA 58.947 50.000 0.00 0.00 0.00 4.02
1124 1140 3.629058 CGTCCATAACCTAGTCGACATG 58.371 50.000 19.50 11.06 0.00 3.21
1274 1290 0.417437 TGGATCCTCTCCTGTTCCCA 59.583 55.000 14.23 0.00 45.21 4.37
1315 1331 1.005037 AGCCTCGACGTCATTGCAA 60.005 52.632 17.16 0.00 0.00 4.08
1361 1377 2.294233 TCTCAACAAGTCTGGCAAATGC 59.706 45.455 0.00 0.00 41.14 3.56
1372 1388 2.224402 GCTCCTGAAGGTCTCAACAAGT 60.224 50.000 0.00 0.00 36.34 3.16
1423 1441 2.030185 GGTCACTTGCTCTTCGACACTA 60.030 50.000 0.00 0.00 0.00 2.74
1497 1515 2.768527 GTCTCCATTGATCTCCTGGACA 59.231 50.000 7.21 0.00 35.29 4.02
1500 1518 2.121948 TGGTCTCCATTGATCTCCTGG 58.878 52.381 0.00 0.00 0.00 4.45
1646 1666 8.959548 TGAAAAGTGTATATTGTCAATGCTCAT 58.040 29.630 8.39 0.00 0.00 2.90
1676 1696 9.409312 CAACTTGAACAATACAAGCATATCAAA 57.591 29.630 0.00 0.00 45.66 2.69
1725 1745 2.564062 CCAATGCAGTCCTGAAAATGGT 59.436 45.455 0.00 0.00 29.35 3.55
1770 1790 1.623811 GTGACCTAGGAACTCTGGCAA 59.376 52.381 17.98 0.00 41.75 4.52
1828 1848 2.300433 ACAGCAGCAAACACATTCTGA 58.700 42.857 0.00 0.00 0.00 3.27
1838 1858 3.633525 AGATCAAAGTCAACAGCAGCAAA 59.366 39.130 0.00 0.00 0.00 3.68
1928 1948 2.103094 TGATCCCATCAGGTCGATTCAC 59.897 50.000 0.00 0.00 36.75 3.18
1932 1952 2.118679 TGTTGATCCCATCAGGTCGAT 58.881 47.619 0.00 0.00 40.94 3.59
1987 2007 1.476845 TACCCGGCCGACATGCATAT 61.477 55.000 30.73 2.96 0.00 1.78
2118 2138 2.494870 GCTTCAAATGCCCTCTCAACAT 59.505 45.455 0.00 0.00 0.00 2.71
2235 2255 0.786435 AAAGCCCCACTGGAGGATTT 59.214 50.000 11.14 11.14 36.94 2.17
2236 2256 0.040204 CAAAGCCCCACTGGAGGATT 59.960 55.000 0.00 0.00 35.39 3.01
2258 2278 1.071471 CCTCCTCAGGCACGTGTTT 59.929 57.895 18.38 2.48 30.98 2.83
2331 2351 1.266718 TGTTCTTCCAAGCGTCATTGC 59.733 47.619 0.00 0.00 0.00 3.56
2364 2384 2.677524 GCCACATTGCCTCTGCCA 60.678 61.111 0.00 0.00 36.33 4.92
2400 2420 6.654582 GCTTCTTCTTCCTCTTCTTCAAATCT 59.345 38.462 0.00 0.00 0.00 2.40
2436 2456 4.696479 TCTTCCTCTTCTTCTGTGCTTT 57.304 40.909 0.00 0.00 0.00 3.51
2621 2650 6.491383 TCTAACTAGTGATGACCTTACCACT 58.509 40.000 0.00 0.00 41.98 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.