Multiple sequence alignment - TraesCS2B01G363700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G363700 chr2B 100.000 9915 0 0 1 9915 518034940 518044854 0.000000e+00 18310.0
1 TraesCS2B01G363700 chr2B 88.028 142 16 1 2742 2883 245773339 245773479 6.160000e-37 167.0
2 TraesCS2B01G363700 chr2B 92.857 112 5 3 9062 9172 638968710 638968601 1.030000e-34 159.0
3 TraesCS2B01G363700 chr2B 97.727 88 2 0 6506 6593 74002833 74002920 1.720000e-32 152.0
4 TraesCS2B01G363700 chr2B 74.302 179 41 4 479 655 729198266 729198091 4.970000e-08 71.3
5 TraesCS2B01G363700 chr2D 96.139 7408 227 24 1 7376 440309505 440316885 0.000000e+00 12041.0
6 TraesCS2B01G363700 chr2D 93.365 1703 66 26 7372 9064 440317239 440318904 0.000000e+00 2475.0
7 TraesCS2B01G363700 chr2D 88.140 371 24 12 9545 9915 440320516 440320866 3.310000e-114 424.0
8 TraesCS2B01G363700 chr2D 78.930 299 24 14 9175 9453 440318905 440319184 6.160000e-37 167.0
9 TraesCS2B01G363700 chr2A 94.415 3259 111 27 5529 8767 583832158 583835365 0.000000e+00 4944.0
10 TraesCS2B01G363700 chr2A 96.224 2701 75 8 2768 5453 583829438 583832126 0.000000e+00 4397.0
11 TraesCS2B01G363700 chr2A 95.911 1981 58 4 812 2779 583827447 583829417 0.000000e+00 3188.0
12 TraesCS2B01G363700 chr2A 89.459 370 21 14 9547 9914 583836190 583836543 1.520000e-122 451.0
13 TraesCS2B01G363700 chr2A 91.639 299 18 6 8771 9064 583835494 583835790 3.330000e-109 407.0
14 TraesCS2B01G363700 chr4D 75.730 548 112 15 1 534 503156052 503156592 1.280000e-63 255.0
15 TraesCS2B01G363700 chr4D 77.108 249 50 7 434 679 469156119 469155875 4.830000e-28 137.0
16 TraesCS2B01G363700 chr4D 76.860 242 48 8 6 243 487062923 487063160 8.080000e-26 130.0
17 TraesCS2B01G363700 chr4D 89.041 73 7 1 7374 7445 22234661 22234733 1.370000e-13 89.8
18 TraesCS2B01G363700 chr4D 100.000 28 0 0 7374 7401 507683367 507683394 1.800000e-02 52.8
19 TraesCS2B01G363700 chr6B 96.053 152 5 1 5391 5541 20230950 20231101 7.690000e-61 246.0
20 TraesCS2B01G363700 chr6B 95.425 153 6 1 5392 5543 291862768 291862616 9.950000e-60 243.0
21 TraesCS2B01G363700 chr6B 88.158 152 18 0 2732 2883 156256712 156256561 2.200000e-41 182.0
22 TraesCS2B01G363700 chr3A 96.026 151 5 1 5392 5541 375018120 375018270 2.770000e-60 244.0
23 TraesCS2B01G363700 chr3A 77.889 199 40 4 46 242 31802765 31802961 4.860000e-23 121.0
24 TraesCS2B01G363700 chr7B 94.839 155 7 1 5391 5544 445663514 445663360 3.580000e-59 241.0
25 TraesCS2B01G363700 chr7B 87.500 144 16 2 2742 2883 348009852 348009995 2.220000e-36 165.0
26 TraesCS2B01G363700 chr7B 95.455 88 4 0 6506 6593 418753000 418752913 3.730000e-29 141.0
27 TraesCS2B01G363700 chr7B 77.397 146 30 3 6 150 137883217 137883074 6.380000e-12 84.2
28 TraesCS2B01G363700 chr6D 95.395 152 6 1 5391 5541 115323720 115323569 3.580000e-59 241.0
29 TraesCS2B01G363700 chr6D 90.517 116 8 3 9060 9174 79857214 79857101 6.200000e-32 150.0
30 TraesCS2B01G363700 chr6D 94.505 91 5 0 6503 6593 186542372 186542462 3.730000e-29 141.0
31 TraesCS2B01G363700 chr6D 70.925 681 157 26 32 683 403809789 403809121 1.350000e-23 122.0
32 TraesCS2B01G363700 chr6D 100.000 31 0 0 7410 7440 65359577 65359547 3.870000e-04 58.4
33 TraesCS2B01G363700 chr5A 94.839 155 7 1 5392 5545 527915775 527915929 3.580000e-59 241.0
34 TraesCS2B01G363700 chr5A 92.121 165 11 2 5392 5555 320690308 320690145 2.150000e-56 231.0
35 TraesCS2B01G363700 chr5A 92.793 111 5 2 9063 9172 512233469 512233577 3.710000e-34 158.0
36 TraesCS2B01G363700 chr5A 71.286 700 170 26 4 683 491237207 491236519 6.200000e-32 150.0
37 TraesCS2B01G363700 chr5A 95.455 88 4 0 6506 6593 230068499 230068412 3.730000e-29 141.0
38 TraesCS2B01G363700 chr5B 90.659 182 12 5 5392 5570 407128601 407128422 4.630000e-58 237.0
39 TraesCS2B01G363700 chr5B 91.228 114 7 2 9061 9173 115399228 115399117 1.720000e-32 152.0
40 TraesCS2B01G363700 chr5B 78.378 148 28 4 6 151 705131902 705132047 1.060000e-14 93.5
41 TraesCS2B01G363700 chr3B 92.806 139 10 0 2745 2883 556495141 556495003 1.690000e-47 202.0
42 TraesCS2B01G363700 chr3B 89.706 136 13 1 2742 2877 302368982 302369116 1.320000e-38 172.0
43 TraesCS2B01G363700 chr3B 79.184 245 50 1 343 587 727948144 727947901 1.710000e-37 169.0
44 TraesCS2B01G363700 chr3B 91.150 113 7 3 9061 9172 4149985 4149875 6.200000e-32 150.0
45 TraesCS2B01G363700 chr3B 91.150 113 7 3 9061 9172 4968011 4967901 6.200000e-32 150.0
46 TraesCS2B01G363700 chr3B 91.818 110 6 2 9063 9171 158717307 158717200 6.200000e-32 150.0
47 TraesCS2B01G363700 chr3B 74.622 331 71 13 390 713 12591606 12591930 6.250000e-27 134.0
48 TraesCS2B01G363700 chr3B 73.354 319 69 16 402 714 242754459 242754767 4.900000e-18 104.0
49 TraesCS2B01G363700 chr5D 89.781 137 13 1 2742 2878 541819184 541819319 3.680000e-39 174.0
50 TraesCS2B01G363700 chr5D 95.876 97 2 1 6499 6595 288354295 288354389 1.330000e-33 156.0
51 TraesCS2B01G363700 chr5D 95.455 88 4 0 6506 6593 472740183 472740096 3.730000e-29 141.0
52 TraesCS2B01G363700 chr5D 78.000 200 40 4 370 567 224866178 224865981 1.350000e-23 122.0
53 TraesCS2B01G363700 chr5D 81.609 87 8 5 7362 7443 319256434 319256351 2.310000e-06 65.8
54 TraesCS2B01G363700 chr1D 88.732 142 13 3 2742 2882 21818652 21818791 4.760000e-38 171.0
55 TraesCS2B01G363700 chr1D 74.571 350 74 10 333 676 489552917 489552577 1.340000e-28 139.0
56 TraesCS2B01G363700 chr1D 81.119 143 23 4 12 152 14745926 14745786 2.930000e-20 111.0
57 TraesCS2B01G363700 chr1D 77.931 145 29 3 2 144 205129263 205129406 4.930000e-13 87.9
58 TraesCS2B01G363700 chr1D 100.000 28 0 0 7374 7401 60405147 60405120 1.800000e-02 52.8
59 TraesCS2B01G363700 chr1B 73.034 534 116 22 13 534 551758765 551758248 7.970000e-36 163.0
60 TraesCS2B01G363700 chr1B 78.750 240 47 4 5 242 416777947 416778184 3.710000e-34 158.0
61 TraesCS2B01G363700 chr1B 100.000 28 0 0 7374 7401 97377928 97377955 1.800000e-02 52.8
62 TraesCS2B01G363700 chr7D 91.964 112 6 3 9063 9173 426778563 426778672 4.800000e-33 154.0
63 TraesCS2B01G363700 chr7A 91.071 112 7 2 9066 9176 538102632 538102523 2.230000e-31 148.0
64 TraesCS2B01G363700 chr7A 74.121 313 76 5 394 704 455593976 455593667 3.760000e-24 124.0
65 TraesCS2B01G363700 chr1A 96.591 88 3 0 6506 6593 566218173 566218086 8.020000e-31 147.0
66 TraesCS2B01G363700 chr1A 73.541 257 55 9 1 252 358768653 358768405 1.770000e-12 86.1
67 TraesCS2B01G363700 chr3D 78.049 205 41 4 481 683 5414728 5414930 1.050000e-24 126.0
68 TraesCS2B01G363700 chr3D 76.613 248 47 9 479 721 532694574 532694333 1.050000e-24 126.0
69 TraesCS2B01G363700 chr4A 92.857 56 4 0 7374 7429 673443081 673443026 2.300000e-11 82.4
70 TraesCS2B01G363700 chr6A 90.698 43 3 1 7416 7457 569998879 569998837 1.000000e-03 56.5
71 TraesCS2B01G363700 chr6A 100.000 28 0 0 7374 7401 581806263 581806290 1.800000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G363700 chr2B 518034940 518044854 9914 False 18310.00 18310 100.0000 1 9915 1 chr2B.!!$F3 9914
1 TraesCS2B01G363700 chr2D 440309505 440320866 11361 False 3776.75 12041 89.1435 1 9915 4 chr2D.!!$F1 9914
2 TraesCS2B01G363700 chr2A 583827447 583836543 9096 False 2677.40 4944 93.5296 812 9914 5 chr2A.!!$F1 9102
3 TraesCS2B01G363700 chr4D 503156052 503156592 540 False 255.00 255 75.7300 1 534 1 chr4D.!!$F3 533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
348 360 0.248498 GCATCGACGAGACGGATTCA 60.248 55.000 3.01 0.0 0.0 2.57 F
769 781 0.323629 TCCGTGGATGTTTGGGAGAC 59.676 55.000 0.00 0.0 0.0 3.36 F
994 1006 1.305219 CGCACCACCAATTCCGTCAT 61.305 55.000 0.00 0.0 0.0 3.06 F
2805 2865 0.034863 ACCAACGGCCCGATACAAAT 60.035 50.000 11.71 0.0 0.0 2.32 F
2831 2891 0.800300 CACCACAACAAACGCACACC 60.800 55.000 0.00 0.0 0.0 4.16 F
2915 2975 1.262683 GGCACTGCAATCTATCTTCGC 59.737 52.381 2.82 0.0 0.0 4.70 F
4310 4384 3.309296 AGTGATGTCGAAGGGGTATGAT 58.691 45.455 0.00 0.0 0.0 2.45 F
4426 4501 3.423539 TTGCTGCTAACTTGGACTGAT 57.576 42.857 0.00 0.0 0.0 2.90 F
5840 5927 4.090761 TCTCCTTGCAATTTCTCACTGT 57.909 40.909 0.00 0.0 0.0 3.55 F
7060 7149 2.293677 CAGCTGGCTGTATTGTACGA 57.706 50.000 13.76 0.0 39.1 3.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1766 1793 1.272490 TGAGAACACCGTCATCACCTC 59.728 52.381 0.00 0.00 0.00 3.85 R
2488 2516 1.549203 ACATGTGAGGACAATTGGGC 58.451 50.000 10.83 1.05 35.11 5.36 R
2834 2894 0.392998 CGCCTGTGTATCCTGCCTTT 60.393 55.000 0.00 0.00 0.00 3.11 R
4033 4106 1.444836 AAAAGTATGCGCGGCTAACA 58.555 45.000 8.83 0.00 0.00 2.41 R
4551 4629 4.579869 GTCCAGTTTCCTGAAAGAGCATA 58.420 43.478 0.00 0.00 41.50 3.14 R
5376 5457 8.547967 TGGCTAGTTCTCAAAAGTAGTTTATG 57.452 34.615 0.00 0.00 0.00 1.90 R
6181 6268 1.003355 CAGTTGCGGGGATGTCTGT 60.003 57.895 0.00 0.00 0.00 3.41 R
6659 6748 8.154649 ACGAAAGTAAGTGTGAAATTCTGAAT 57.845 30.769 0.00 0.00 46.88 2.57 R
8287 8746 0.833287 GGAGCCAGAACAGCCATCTA 59.167 55.000 0.00 0.00 0.00 1.98 R
9181 9771 0.094216 CGATCAGCTTTCAGCACACG 59.906 55.000 0.00 0.00 45.56 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 133 2.203153 AACCAGTTGCGTCCGCTT 60.203 55.556 13.31 0.00 42.51 4.68
232 235 3.064324 GCAGATGCGCAACCCCTT 61.064 61.111 17.11 0.00 0.00 3.95
261 273 2.615244 TGGAATCGGGCTACCACAT 58.385 52.632 0.00 0.00 36.13 3.21
267 279 2.189521 GGGCTACCACATGTCGGG 59.810 66.667 15.78 9.43 36.50 5.14
269 281 2.584608 GCTACCACATGTCGGGCT 59.415 61.111 15.78 2.37 0.00 5.19
289 301 2.114670 AAGTATTGCGCGGCATGCT 61.115 52.632 18.92 0.42 43.27 3.79
291 303 2.513435 TATTGCGCGGCATGCTCA 60.513 55.556 18.92 7.94 43.27 4.26
311 323 2.047274 ATGTAAGGCAGTGCGCGT 60.047 55.556 8.43 3.24 43.84 6.01
313 325 2.736995 GTAAGGCAGTGCGCGTGA 60.737 61.111 13.40 0.00 43.84 4.35
324 336 3.179265 CGCGTGACAGCCCTTACG 61.179 66.667 0.00 0.00 39.37 3.18
329 341 2.125106 GACAGCCCTTACGCCAGG 60.125 66.667 0.00 0.00 0.00 4.45
335 347 2.499205 CCTTACGCCAGGCATCGA 59.501 61.111 13.30 0.00 0.00 3.59
348 360 0.248498 GCATCGACGAGACGGATTCA 60.248 55.000 3.01 0.00 0.00 2.57
433 445 2.388232 GCCGGCTTTGACCACTACG 61.388 63.158 22.15 0.00 0.00 3.51
443 455 1.754803 TGACCACTACGGATCCATCAC 59.245 52.381 13.41 0.00 38.63 3.06
455 467 1.275666 TCCATCACCGACCTCACATT 58.724 50.000 0.00 0.00 0.00 2.71
465 477 0.615331 ACCTCACATTCACTGGCGAT 59.385 50.000 0.00 0.00 0.00 4.58
469 481 1.159285 CACATTCACTGGCGATGTGT 58.841 50.000 7.37 0.00 38.16 3.72
512 524 0.755698 GAGTAGGGCATGGGAGACGA 60.756 60.000 0.00 0.00 0.00 4.20
515 527 2.561467 TAGGGCATGGGAGACGACGA 62.561 60.000 0.00 0.00 0.00 4.20
516 528 2.797278 GGGCATGGGAGACGACGAT 61.797 63.158 0.00 0.00 0.00 3.73
520 532 2.058001 ATGGGAGACGACGATGCCA 61.058 57.895 17.09 17.09 41.51 4.92
527 539 2.254703 GACGACGATGCCACGAGTCT 62.255 60.000 0.00 0.00 39.26 3.24
541 553 1.004277 GAGTCTCGTGAGTTGGTGCG 61.004 60.000 0.00 0.00 0.00 5.34
544 556 1.299850 CTCGTGAGTTGGTGCGTGA 60.300 57.895 0.00 0.00 0.00 4.35
546 558 1.591594 CGTGAGTTGGTGCGTGACT 60.592 57.895 0.00 0.00 0.00 3.41
548 560 1.299850 TGAGTTGGTGCGTGACTCG 60.300 57.895 0.00 0.00 42.02 4.18
552 564 1.880796 TTGGTGCGTGACTCGTGTG 60.881 57.895 0.00 0.00 42.13 3.82
554 566 2.658593 GTGCGTGACTCGTGTGCT 60.659 61.111 0.00 0.00 42.13 4.40
564 576 2.352342 GACTCGTGTGCTACTCTACCTC 59.648 54.545 0.00 0.00 0.00 3.85
570 582 2.747989 TGTGCTACTCTACCTCGTTGAG 59.252 50.000 2.35 2.35 40.24 3.02
571 583 3.008330 GTGCTACTCTACCTCGTTGAGA 58.992 50.000 9.67 0.00 37.54 3.27
576 588 2.082231 CTCTACCTCGTTGAGAACCGA 58.918 52.381 0.00 0.00 37.54 4.69
605 617 1.832167 GGGTCAAAGCAGCCAACCA 60.832 57.895 5.69 0.00 33.76 3.67
613 625 3.030652 CAGCCAACCACCGAACAC 58.969 61.111 0.00 0.00 0.00 3.32
653 665 2.103263 CAGGCTCCGCTTTAGATTAGGT 59.897 50.000 0.00 0.00 0.00 3.08
659 671 4.178540 TCCGCTTTAGATTAGGTTTCACG 58.821 43.478 0.00 0.00 0.00 4.35
683 695 5.976534 GCGCATGTAATTGTATGGATTTGAA 59.023 36.000 0.30 0.00 0.00 2.69
768 780 1.065491 CATCCGTGGATGTTTGGGAGA 60.065 52.381 18.76 0.00 44.93 3.71
769 781 0.323629 TCCGTGGATGTTTGGGAGAC 59.676 55.000 0.00 0.00 0.00 3.36
775 787 3.127030 GTGGATGTTTGGGAGACGAAATC 59.873 47.826 0.00 0.00 40.26 2.17
786 798 4.322499 GGGAGACGAAATCTGGAAGTTGTA 60.322 45.833 0.00 0.00 38.00 2.41
788 800 5.470047 AGACGAAATCTGGAAGTTGTAGT 57.530 39.130 0.00 0.00 35.81 2.73
817 829 2.852748 CTCTAACCGTGTTCAGACTCG 58.147 52.381 0.00 0.00 41.16 4.18
856 868 2.143122 GATCTCGGTTTGTGCAGAACA 58.857 47.619 13.21 0.00 36.85 3.18
892 904 2.628178 GGCCTTGCTACTTTTCCAAACT 59.372 45.455 0.00 0.00 0.00 2.66
951 963 2.926242 TCAACTCCGTCCCCCACC 60.926 66.667 0.00 0.00 0.00 4.61
952 964 4.029809 CAACTCCGTCCCCCACCC 62.030 72.222 0.00 0.00 0.00 4.61
994 1006 1.305219 CGCACCACCAATTCCGTCAT 61.305 55.000 0.00 0.00 0.00 3.06
1011 1023 3.376540 GTCATCAGCGATGTACTCTTCC 58.623 50.000 15.04 0.00 40.55 3.46
1329 1353 2.283676 TTCTCCTCCTTCCGCCGT 60.284 61.111 0.00 0.00 0.00 5.68
1384 1408 2.359354 CCGCATTCACGAACCCCA 60.359 61.111 0.00 0.00 34.06 4.96
1439 1463 2.100879 GAGCCCGCGGAGATACCAAT 62.101 60.000 30.73 0.22 38.90 3.16
1728 1755 2.565841 GATGAGGAAGGGGATTTCGTG 58.434 52.381 0.00 0.00 0.00 4.35
1766 1793 2.897350 GGAGAAGAATGCGGCGGG 60.897 66.667 9.78 0.00 0.00 6.13
1812 1839 2.292521 TGTTGAGGTAGCCAGAGAGGAT 60.293 50.000 0.00 0.00 41.22 3.24
1866 1893 5.476599 CAGGAAGGTGTTTGGTTATGATTCA 59.523 40.000 0.00 0.00 0.00 2.57
1926 1953 4.131088 GGGGAGTCGACGGTGCTC 62.131 72.222 10.46 1.19 0.00 4.26
2029 2056 6.018913 CAGTTCTGACATGATCTTGATGCTAC 60.019 42.308 15.03 7.44 0.00 3.58
2061 2088 2.360165 CCTGCTATGATTTTGCCTGGAC 59.640 50.000 0.00 0.00 0.00 4.02
2169 2196 5.671329 GCGAGTAGTCAGGTAAATGCAAAAG 60.671 44.000 0.00 0.00 0.00 2.27
2384 2412 7.953158 TTTTGCCTTATCTAGAGAATCATCG 57.047 36.000 0.00 0.00 37.82 3.84
2478 2506 9.796120 TGAGAAACAACAATTCGTCTTAAATTT 57.204 25.926 0.00 0.00 32.04 1.82
2530 2558 3.021269 TGCAGTAGTGACGTTAACCTG 57.979 47.619 0.42 0.97 0.00 4.00
2545 2573 7.430441 ACGTTAACCTGTATTTTGCTTCATTT 58.570 30.769 0.00 0.00 0.00 2.32
2805 2865 0.034863 ACCAACGGCCCGATACAAAT 60.035 50.000 11.71 0.00 0.00 2.32
2831 2891 0.800300 CACCACAACAAACGCACACC 60.800 55.000 0.00 0.00 0.00 4.16
2834 2894 1.679305 ACAACAAACGCACACCCCA 60.679 52.632 0.00 0.00 0.00 4.96
2856 2916 1.450312 GCAGGATACACAGGCGCTT 60.450 57.895 7.64 0.00 41.41 4.68
2914 2974 2.554142 TGGCACTGCAATCTATCTTCG 58.446 47.619 2.82 0.00 0.00 3.79
2915 2975 1.262683 GGCACTGCAATCTATCTTCGC 59.737 52.381 2.82 0.00 0.00 4.70
3121 3191 5.651612 TGAATCACATAATCAGATGGGGT 57.348 39.130 0.00 0.00 30.63 4.95
3355 3427 7.409343 GCGTTTACTTTTTGTGATACATTCAGC 60.409 37.037 0.00 0.00 34.17 4.26
3377 3449 6.476380 CAGCTAGTTTCATTGCTTTGTTTTCA 59.524 34.615 0.00 0.00 33.03 2.69
3693 3766 8.258708 GTGATAACAGGTAGTTTACTCATCCTT 58.741 37.037 0.00 0.00 41.64 3.36
3820 3893 5.015178 AGTCTCCCCCTTTTGTCAATATGAA 59.985 40.000 0.00 0.00 0.00 2.57
4033 4106 6.183360 GGCATTCCATCTTTAGCTTGTTATGT 60.183 38.462 0.00 0.00 0.00 2.29
4310 4384 3.309296 AGTGATGTCGAAGGGGTATGAT 58.691 45.455 0.00 0.00 0.00 2.45
4426 4501 3.423539 TTGCTGCTAACTTGGACTGAT 57.576 42.857 0.00 0.00 0.00 2.90
4509 4585 7.766278 ACATACAGGTAAGAACTTCATGATGTC 59.234 37.037 14.07 8.39 0.00 3.06
4532 4610 9.862149 TGTCATATACACTTCTCCATTCTACTA 57.138 33.333 0.00 0.00 31.43 1.82
4544 4622 9.922477 TTCTCCATTCTACTATCTTCTAGAACA 57.078 33.333 0.00 0.00 32.94 3.18
5347 5427 5.910637 TTTGAACTGTACGGTACAATGAC 57.089 39.130 20.43 12.77 38.38 3.06
5826 5913 6.818233 TCTTCAGATGAGATGATTCTCCTTG 58.182 40.000 0.83 0.00 46.67 3.61
5840 5927 4.090761 TCTCCTTGCAATTTCTCACTGT 57.909 40.909 0.00 0.00 0.00 3.55
6190 6277 6.512415 GCTGAATTGTATTGCTACAGACATCC 60.512 42.308 0.00 0.00 39.00 3.51
6443 6532 4.161377 AGCTAAAGGTTTGCCTGAACAAAA 59.839 37.500 0.00 0.00 46.33 2.44
6658 6747 3.986277 ACTGAAATTGCTTTTGAGCTGG 58.014 40.909 0.00 0.00 32.36 4.85
6659 6748 3.638160 ACTGAAATTGCTTTTGAGCTGGA 59.362 39.130 0.00 0.00 32.36 3.86
6893 6982 6.735678 ACCAAAACAAAAACCTAAGCAAAG 57.264 33.333 0.00 0.00 0.00 2.77
6926 7015 7.985476 TGACAAAGAAAAGAGAAACCAACTAG 58.015 34.615 0.00 0.00 0.00 2.57
7060 7149 2.293677 CAGCTGGCTGTATTGTACGA 57.706 50.000 13.76 0.00 39.10 3.43
7075 7164 4.090761 TGTACGAGTACCTAGGTATGGG 57.909 50.000 24.36 17.22 35.26 4.00
7278 7368 2.697751 TGCTTGGTTTTGTTGGCTGTAT 59.302 40.909 0.00 0.00 0.00 2.29
7524 7978 4.860907 GTCATTGACTGCATTTGCTTTAGG 59.139 41.667 9.59 0.00 42.66 2.69
7528 7982 5.371115 TGACTGCATTTGCTTTAGGTAAC 57.629 39.130 3.94 0.00 42.66 2.50
7551 8005 6.507900 ACTGCTATACACACACTATTGCTAG 58.492 40.000 0.00 0.00 0.00 3.42
7581 8035 3.578716 GGGCACACTTGATATAGCCTAGA 59.421 47.826 0.00 0.00 41.71 2.43
7840 8296 9.710900 TCTATGTTATGCTCCTTATGTTATGTG 57.289 33.333 0.00 0.00 0.00 3.21
8020 8476 5.691896 AGGTGGTAAACAGTTTCTTAAGCT 58.308 37.500 0.48 0.00 0.00 3.74
8064 8520 9.559958 CTTGTCATACAATATTGTCCTTCAAAC 57.440 33.333 24.00 13.53 42.35 2.93
8066 8522 9.952030 TGTCATACAATATTGTCCTTCAAACTA 57.048 29.630 24.00 3.70 42.35 2.24
8085 8541 8.043113 TCAAACTATAGTTGCAGATCATCAGTT 58.957 33.333 18.70 0.00 38.44 3.16
8135 8594 9.686683 AGTAAATCATGTACTCAATAGGCTTTT 57.313 29.630 0.00 0.00 0.00 2.27
8287 8746 6.463995 TGCTGTCAAAGGTTGTAAAAAGAT 57.536 33.333 0.00 0.00 0.00 2.40
8303 8762 2.926778 AGATAGATGGCTGTTCTGGC 57.073 50.000 0.00 0.00 0.00 4.85
8306 8765 0.833287 TAGATGGCTGTTCTGGCTCC 59.167 55.000 5.11 0.00 0.00 4.70
8390 8849 4.528504 CAGACGATGATTACTGTACTCCG 58.471 47.826 3.15 3.37 0.00 4.63
8427 8886 1.078848 GCGTGCTCTCTTCCCACAT 60.079 57.895 0.00 0.00 0.00 3.21
8550 9009 9.847224 ATATAAAGGTAAGAACTAACACCATGG 57.153 33.333 11.19 11.19 33.27 3.66
8576 9035 6.924111 ACATTTTCCACTGTGATTGGTAATC 58.076 36.000 9.86 0.00 38.40 1.75
8610 9069 2.549754 CGCCTGACAATTTCTTCACTGT 59.450 45.455 0.00 0.00 0.00 3.55
8681 9140 1.788258 CTGTCGCGAGGATTATGCAT 58.212 50.000 10.24 3.79 0.00 3.96
8750 9209 4.766891 CACTTCTGGTCTCTCTCTTTCTCT 59.233 45.833 0.00 0.00 0.00 3.10
8755 9214 3.075283 TGGTCTCTCTCTTTCTCTGGACT 59.925 47.826 0.00 0.00 0.00 3.85
8767 9226 8.924511 TCTTTCTCTGGACTCATTTTGTTATT 57.075 30.769 0.00 0.00 0.00 1.40
8801 9385 2.343101 TGTCTTTCCACCGATTTAGCG 58.657 47.619 0.00 0.00 0.00 4.26
8804 9388 1.670811 CTTTCCACCGATTTAGCGCAT 59.329 47.619 11.47 0.00 0.00 4.73
8872 9460 4.640771 TTTTCCAGTGGTCATAGAAGCT 57.359 40.909 9.54 0.00 0.00 3.74
8902 9490 4.475944 CAGAGCTTGTTAAATTCGTTGGG 58.524 43.478 0.00 0.00 0.00 4.12
8916 9504 3.881220 TCGTTGGGAAGGGTGAATAATC 58.119 45.455 0.00 0.00 0.00 1.75
8917 9505 3.521937 TCGTTGGGAAGGGTGAATAATCT 59.478 43.478 0.00 0.00 0.00 2.40
8918 9506 4.717778 TCGTTGGGAAGGGTGAATAATCTA 59.282 41.667 0.00 0.00 0.00 1.98
8919 9507 4.814771 CGTTGGGAAGGGTGAATAATCTAC 59.185 45.833 0.00 0.00 0.00 2.59
8920 9508 5.628200 CGTTGGGAAGGGTGAATAATCTACA 60.628 44.000 0.00 0.00 0.00 2.74
8922 9510 6.001449 TGGGAAGGGTGAATAATCTACAAG 57.999 41.667 0.00 0.00 0.00 3.16
8923 9511 4.822350 GGGAAGGGTGAATAATCTACAAGC 59.178 45.833 0.00 0.00 0.00 4.01
8924 9512 5.437060 GGAAGGGTGAATAATCTACAAGCA 58.563 41.667 0.00 0.00 0.00 3.91
8955 9543 3.387050 AGAACCGTTGTCTAAGGTCTTGT 59.613 43.478 0.00 0.00 37.26 3.16
8971 9559 4.562757 GGTCTTGTCAGGCTACAATGTACA 60.563 45.833 0.00 0.00 38.61 2.90
9055 9645 0.840288 TGCCCACTCCCATGTACACT 60.840 55.000 0.00 0.00 0.00 3.55
9064 9654 4.406003 ACTCCCATGTACACTCTCCAATAC 59.594 45.833 0.00 0.00 0.00 1.89
9066 9656 4.649674 TCCCATGTACACTCTCCAATACTC 59.350 45.833 0.00 0.00 0.00 2.59
9067 9657 4.202264 CCCATGTACACTCTCCAATACTCC 60.202 50.000 0.00 0.00 0.00 3.85
9068 9658 4.202264 CCATGTACACTCTCCAATACTCCC 60.202 50.000 0.00 0.00 0.00 4.30
9075 9665 4.027437 ACTCTCCAATACTCCCTCTGTTC 58.973 47.826 0.00 0.00 0.00 3.18
9076 9666 4.026744 CTCTCCAATACTCCCTCTGTTCA 58.973 47.826 0.00 0.00 0.00 3.18
9080 9670 4.597507 TCCAATACTCCCTCTGTTCACTTT 59.402 41.667 0.00 0.00 0.00 2.66
9083 9673 3.933861 ACTCCCTCTGTTCACTTTTGT 57.066 42.857 0.00 0.00 0.00 2.83
9084 9674 6.681729 ATACTCCCTCTGTTCACTTTTGTA 57.318 37.500 0.00 0.00 0.00 2.41
9085 9675 5.367945 ACTCCCTCTGTTCACTTTTGTAA 57.632 39.130 0.00 0.00 0.00 2.41
9086 9676 5.368989 ACTCCCTCTGTTCACTTTTGTAAG 58.631 41.667 0.00 0.00 37.40 2.34
9089 9679 4.211374 CCCTCTGTTCACTTTTGTAAGACG 59.789 45.833 0.00 0.00 35.30 4.18
9090 9680 4.809426 CCTCTGTTCACTTTTGTAAGACGT 59.191 41.667 0.00 0.00 35.30 4.34
9091 9681 5.293569 CCTCTGTTCACTTTTGTAAGACGTT 59.706 40.000 0.00 0.00 35.30 3.99
9092 9682 6.183360 CCTCTGTTCACTTTTGTAAGACGTTT 60.183 38.462 0.00 0.00 35.30 3.60
9093 9683 7.136289 TCTGTTCACTTTTGTAAGACGTTTT 57.864 32.000 0.00 0.00 35.30 2.43
9094 9684 8.254178 TCTGTTCACTTTTGTAAGACGTTTTA 57.746 30.769 0.00 0.00 35.30 1.52
9095 9685 8.385111 TCTGTTCACTTTTGTAAGACGTTTTAG 58.615 33.333 0.00 0.00 35.30 1.85
9096 9686 8.254178 TGTTCACTTTTGTAAGACGTTTTAGA 57.746 30.769 0.00 0.00 35.30 2.10
9097 9687 8.170553 TGTTCACTTTTGTAAGACGTTTTAGAC 58.829 33.333 0.00 0.00 35.30 2.59
9098 9688 7.830940 TCACTTTTGTAAGACGTTTTAGACA 57.169 32.000 0.00 0.00 35.30 3.41
9099 9689 7.902032 TCACTTTTGTAAGACGTTTTAGACAG 58.098 34.615 0.00 0.25 35.30 3.51
9100 9690 6.627671 CACTTTTGTAAGACGTTTTAGACAGC 59.372 38.462 0.00 0.00 35.30 4.40
9101 9691 6.537660 ACTTTTGTAAGACGTTTTAGACAGCT 59.462 34.615 0.00 0.00 35.30 4.24
9102 9692 5.900339 TTGTAAGACGTTTTAGACAGCTG 57.100 39.130 13.48 13.48 0.00 4.24
9103 9693 5.190992 TGTAAGACGTTTTAGACAGCTGA 57.809 39.130 23.35 0.00 0.00 4.26
9104 9694 5.593968 TGTAAGACGTTTTAGACAGCTGAA 58.406 37.500 23.35 0.48 0.00 3.02
9105 9695 6.044046 TGTAAGACGTTTTAGACAGCTGAAA 58.956 36.000 23.35 7.93 0.00 2.69
9106 9696 6.535865 TGTAAGACGTTTTAGACAGCTGAAAA 59.464 34.615 23.35 13.98 32.30 2.29
9107 9697 6.431198 AAGACGTTTTAGACAGCTGAAAAA 57.569 33.333 23.35 19.05 32.30 1.94
9108 9698 6.619801 AGACGTTTTAGACAGCTGAAAAAT 57.380 33.333 23.35 8.54 32.30 1.82
9109 9699 6.659776 AGACGTTTTAGACAGCTGAAAAATC 58.340 36.000 23.35 15.95 32.30 2.17
9110 9700 5.440685 ACGTTTTAGACAGCTGAAAAATCG 58.559 37.500 23.35 24.25 32.30 3.34
9111 9701 5.235616 ACGTTTTAGACAGCTGAAAAATCGA 59.764 36.000 28.61 12.51 32.30 3.59
9112 9702 6.133392 CGTTTTAGACAGCTGAAAAATCGAA 58.867 36.000 23.35 6.72 32.30 3.71
9113 9703 6.085068 CGTTTTAGACAGCTGAAAAATCGAAC 59.915 38.462 23.35 12.71 32.30 3.95
9114 9704 6.861065 TTTAGACAGCTGAAAAATCGAACT 57.139 33.333 23.35 5.97 0.00 3.01
9115 9705 4.739046 AGACAGCTGAAAAATCGAACTG 57.261 40.909 23.35 0.00 0.00 3.16
9116 9706 4.130118 AGACAGCTGAAAAATCGAACTGT 58.870 39.130 23.35 0.00 39.45 3.55
9117 9707 4.576463 AGACAGCTGAAAAATCGAACTGTT 59.424 37.500 23.35 0.00 37.05 3.16
9118 9708 5.066505 AGACAGCTGAAAAATCGAACTGTTT 59.933 36.000 23.35 0.00 37.05 2.83
9119 9709 6.260050 AGACAGCTGAAAAATCGAACTGTTTA 59.740 34.615 23.35 0.00 37.05 2.01
9120 9710 6.430451 ACAGCTGAAAAATCGAACTGTTTAG 58.570 36.000 23.35 0.00 33.31 1.85
9121 9711 5.340667 CAGCTGAAAAATCGAACTGTTTAGC 59.659 40.000 8.42 8.65 0.00 3.09
9122 9712 5.239525 AGCTGAAAAATCGAACTGTTTAGCT 59.760 36.000 11.95 11.95 0.00 3.32
9123 9713 5.340667 GCTGAAAAATCGAACTGTTTAGCTG 59.659 40.000 0.00 0.00 0.00 4.24
9124 9714 6.371809 TGAAAAATCGAACTGTTTAGCTGT 57.628 33.333 0.00 0.00 0.00 4.40
9125 9715 6.791303 TGAAAAATCGAACTGTTTAGCTGTT 58.209 32.000 0.00 0.00 41.08 3.16
9126 9716 6.690957 TGAAAAATCGAACTGTTTAGCTGTTG 59.309 34.615 0.00 0.00 38.98 3.33
9127 9717 5.751243 AAATCGAACTGTTTAGCTGTTGT 57.249 34.783 0.00 0.00 38.98 3.32
9128 9718 4.992381 ATCGAACTGTTTAGCTGTTGTC 57.008 40.909 0.00 0.00 38.98 3.18
9129 9719 4.054780 TCGAACTGTTTAGCTGTTGTCT 57.945 40.909 0.00 0.00 38.98 3.41
9130 9720 4.439057 TCGAACTGTTTAGCTGTTGTCTT 58.561 39.130 0.00 0.00 38.98 3.01
9131 9721 5.593968 TCGAACTGTTTAGCTGTTGTCTTA 58.406 37.500 0.00 0.00 38.98 2.10
9132 9722 6.044046 TCGAACTGTTTAGCTGTTGTCTTAA 58.956 36.000 0.00 0.00 38.98 1.85
9133 9723 6.535865 TCGAACTGTTTAGCTGTTGTCTTAAA 59.464 34.615 0.00 0.00 38.98 1.52
9134 9724 7.225931 TCGAACTGTTTAGCTGTTGTCTTAAAT 59.774 33.333 0.00 0.00 38.98 1.40
9135 9725 7.321271 CGAACTGTTTAGCTGTTGTCTTAAATG 59.679 37.037 0.00 0.00 38.98 2.32
9136 9726 7.568199 ACTGTTTAGCTGTTGTCTTAAATGT 57.432 32.000 0.00 0.00 0.00 2.71
9137 9727 7.639945 ACTGTTTAGCTGTTGTCTTAAATGTC 58.360 34.615 0.00 0.00 0.00 3.06
9138 9728 7.499232 ACTGTTTAGCTGTTGTCTTAAATGTCT 59.501 33.333 0.00 0.00 0.00 3.41
9139 9729 8.896320 TGTTTAGCTGTTGTCTTAAATGTCTA 57.104 30.769 0.00 0.00 0.00 2.59
9140 9730 9.332502 TGTTTAGCTGTTGTCTTAAATGTCTAA 57.667 29.630 0.00 0.00 0.00 2.10
9144 9734 7.352739 AGCTGTTGTCTTAAATGTCTAAAACG 58.647 34.615 0.00 0.00 0.00 3.60
9145 9735 7.012044 AGCTGTTGTCTTAAATGTCTAAAACGT 59.988 33.333 0.00 0.00 0.00 3.99
9146 9736 7.320560 GCTGTTGTCTTAAATGTCTAAAACGTC 59.679 37.037 0.00 0.00 0.00 4.34
9147 9737 8.428186 TGTTGTCTTAAATGTCTAAAACGTCT 57.572 30.769 0.00 0.00 0.00 4.18
9148 9738 8.885722 TGTTGTCTTAAATGTCTAAAACGTCTT 58.114 29.630 0.00 0.00 0.00 3.01
9151 9741 9.531942 TGTCTTAAATGTCTAAAACGTCTTACA 57.468 29.630 0.00 0.00 0.00 2.41
9160 9750 9.493206 TGTCTAAAACGTCTTACAAAATTGAAC 57.507 29.630 0.00 0.00 0.00 3.18
9161 9751 9.712359 GTCTAAAACGTCTTACAAAATTGAACT 57.288 29.630 0.00 0.00 0.00 3.01
9162 9752 9.710979 TCTAAAACGTCTTACAAAATTGAACTG 57.289 29.630 0.00 0.00 0.00 3.16
9163 9753 9.710979 CTAAAACGTCTTACAAAATTGAACTGA 57.289 29.630 0.00 0.00 0.00 3.41
9164 9754 8.614994 AAAACGTCTTACAAAATTGAACTGAG 57.385 30.769 0.00 0.00 0.00 3.35
9165 9755 6.300354 ACGTCTTACAAAATTGAACTGAGG 57.700 37.500 0.00 2.07 0.00 3.86
9166 9756 5.238650 ACGTCTTACAAAATTGAACTGAGGG 59.761 40.000 0.00 0.00 0.00 4.30
9167 9757 5.468746 CGTCTTACAAAATTGAACTGAGGGA 59.531 40.000 0.00 0.00 0.00 4.20
9168 9758 6.347725 CGTCTTACAAAATTGAACTGAGGGAG 60.348 42.308 0.00 0.00 0.00 4.30
9169 9759 6.486993 GTCTTACAAAATTGAACTGAGGGAGT 59.513 38.462 0.00 0.00 35.94 3.85
9170 9760 7.660208 GTCTTACAAAATTGAACTGAGGGAGTA 59.340 37.037 0.00 0.00 33.09 2.59
9171 9761 7.878127 TCTTACAAAATTGAACTGAGGGAGTAG 59.122 37.037 0.00 0.00 33.09 2.57
9172 9762 5.941788 ACAAAATTGAACTGAGGGAGTAGT 58.058 37.500 0.00 0.00 33.09 2.73
9173 9763 6.365520 ACAAAATTGAACTGAGGGAGTAGTT 58.634 36.000 0.00 0.00 39.67 2.24
9174 9764 6.263168 ACAAAATTGAACTGAGGGAGTAGTTG 59.737 38.462 0.00 0.00 37.27 3.16
9175 9765 5.568620 AATTGAACTGAGGGAGTAGTTGT 57.431 39.130 0.00 0.00 37.27 3.32
9176 9766 5.568620 ATTGAACTGAGGGAGTAGTTGTT 57.431 39.130 0.00 0.00 37.27 2.83
9177 9767 6.681729 ATTGAACTGAGGGAGTAGTTGTTA 57.318 37.500 0.00 0.00 37.27 2.41
9178 9768 6.681729 TTGAACTGAGGGAGTAGTTGTTAT 57.318 37.500 0.00 0.00 37.27 1.89
9179 9769 6.282199 TGAACTGAGGGAGTAGTTGTTATC 57.718 41.667 0.00 0.00 37.27 1.75
9180 9770 5.187186 TGAACTGAGGGAGTAGTTGTTATCC 59.813 44.000 0.00 0.00 37.27 2.59
9184 9774 3.175109 GGGAGTAGTTGTTATCCCGTG 57.825 52.381 0.00 0.00 41.98 4.94
9185 9775 2.498885 GGGAGTAGTTGTTATCCCGTGT 59.501 50.000 0.00 0.00 41.98 4.49
9186 9776 3.518590 GGAGTAGTTGTTATCCCGTGTG 58.481 50.000 0.00 0.00 0.00 3.82
9187 9777 2.928116 GAGTAGTTGTTATCCCGTGTGC 59.072 50.000 0.00 0.00 0.00 4.57
9188 9778 2.565834 AGTAGTTGTTATCCCGTGTGCT 59.434 45.455 0.00 0.00 0.00 4.40
9189 9779 1.808411 AGTTGTTATCCCGTGTGCTG 58.192 50.000 0.00 0.00 0.00 4.41
9190 9780 1.346395 AGTTGTTATCCCGTGTGCTGA 59.654 47.619 0.00 0.00 0.00 4.26
9191 9781 2.147958 GTTGTTATCCCGTGTGCTGAA 58.852 47.619 0.00 0.00 0.00 3.02
9192 9782 2.550606 GTTGTTATCCCGTGTGCTGAAA 59.449 45.455 0.00 0.00 0.00 2.69
9207 9797 0.602638 TGAAAGCTGATCGCCGTTGT 60.603 50.000 6.02 0.00 40.39 3.32
9263 9854 0.036294 GTTGGTAGCAGAGGGGACAC 60.036 60.000 0.00 0.00 0.00 3.67
9266 9857 1.617947 GGTAGCAGAGGGGACACCAG 61.618 65.000 0.00 0.00 43.89 4.00
9289 9880 0.806102 CGCCTCCGGTGTGAAGTATG 60.806 60.000 0.00 0.00 0.00 2.39
9305 9899 2.097466 AGTATGTATGCAAGCAAACGCC 59.903 45.455 0.00 0.00 0.00 5.68
9328 9922 2.739379 GCCTTTCAGTCAAGCTGTCTAC 59.261 50.000 0.00 0.00 45.23 2.59
9329 9923 3.803715 GCCTTTCAGTCAAGCTGTCTACA 60.804 47.826 0.00 0.00 45.23 2.74
9330 9924 4.573900 CCTTTCAGTCAAGCTGTCTACAT 58.426 43.478 0.00 0.00 45.23 2.29
9331 9925 4.391216 CCTTTCAGTCAAGCTGTCTACATG 59.609 45.833 0.00 0.00 45.23 3.21
9332 9926 3.599730 TCAGTCAAGCTGTCTACATGG 57.400 47.619 0.00 0.00 45.23 3.66
9333 9927 2.234661 TCAGTCAAGCTGTCTACATGGG 59.765 50.000 0.00 0.00 45.23 4.00
9334 9928 1.556911 AGTCAAGCTGTCTACATGGGG 59.443 52.381 0.00 0.00 0.00 4.96
9335 9929 0.911769 TCAAGCTGTCTACATGGGGG 59.088 55.000 0.00 0.00 0.00 5.40
9336 9930 0.620556 CAAGCTGTCTACATGGGGGT 59.379 55.000 0.00 0.00 0.00 4.95
9337 9931 0.912486 AAGCTGTCTACATGGGGGTC 59.088 55.000 0.00 0.00 0.00 4.46
9338 9932 0.043334 AGCTGTCTACATGGGGGTCT 59.957 55.000 0.00 0.00 0.00 3.85
9339 9933 0.179000 GCTGTCTACATGGGGGTCTG 59.821 60.000 0.00 0.00 0.00 3.51
9340 9934 0.833287 CTGTCTACATGGGGGTCTGG 59.167 60.000 0.00 0.00 0.00 3.86
9341 9935 1.271840 TGTCTACATGGGGGTCTGGC 61.272 60.000 0.00 0.00 0.00 4.85
9342 9936 1.692749 TCTACATGGGGGTCTGGCC 60.693 63.158 0.00 0.00 0.00 5.36
9343 9937 3.087253 TACATGGGGGTCTGGCCG 61.087 66.667 0.00 0.00 38.44 6.13
9372 9966 1.299648 CGGGTCAGCCAGGATCAAA 59.700 57.895 0.00 0.00 36.17 2.69
9385 9979 1.475682 GGATCAAAAGGCAGAAGCAGG 59.524 52.381 0.00 0.00 44.61 4.85
9388 9982 0.886563 CAAAAGGCAGAAGCAGGGAG 59.113 55.000 0.00 0.00 44.61 4.30
9390 9984 0.037447 AAAGGCAGAAGCAGGGAGAC 59.963 55.000 0.00 0.00 44.61 3.36
9391 9985 1.130054 AAGGCAGAAGCAGGGAGACA 61.130 55.000 0.00 0.00 44.61 3.41
9421 10030 9.196552 GACATTTCCTGATTAAAGAAACAAAGG 57.803 33.333 0.00 0.00 32.67 3.11
9442 10051 3.922910 GGAAACCAGTGGTGTACTAGAC 58.077 50.000 17.56 0.00 37.60 2.59
9443 10052 3.572584 GAAACCAGTGGTGTACTAGACG 58.427 50.000 17.56 0.00 37.60 4.18
9444 10053 2.574006 ACCAGTGGTGTACTAGACGA 57.426 50.000 15.86 0.00 37.60 4.20
9445 10054 2.434428 ACCAGTGGTGTACTAGACGAG 58.566 52.381 15.86 0.00 37.60 4.18
9446 10055 2.039480 ACCAGTGGTGTACTAGACGAGA 59.961 50.000 15.86 0.00 37.60 4.04
9447 10056 2.678836 CCAGTGGTGTACTAGACGAGAG 59.321 54.545 0.00 0.00 37.60 3.20
9448 10057 3.597255 CAGTGGTGTACTAGACGAGAGA 58.403 50.000 0.00 0.00 37.60 3.10
9449 10058 4.193090 CAGTGGTGTACTAGACGAGAGAT 58.807 47.826 0.00 0.00 37.60 2.75
9450 10059 4.034626 CAGTGGTGTACTAGACGAGAGATG 59.965 50.000 0.00 0.00 37.60 2.90
9451 10060 4.081031 AGTGGTGTACTAGACGAGAGATGA 60.081 45.833 0.00 0.00 38.04 2.92
9452 10061 4.271533 GTGGTGTACTAGACGAGAGATGAG 59.728 50.000 0.00 0.00 0.00 2.90
9453 10062 4.081031 TGGTGTACTAGACGAGAGATGAGT 60.081 45.833 0.00 0.00 0.00 3.41
9454 10063 4.877251 GGTGTACTAGACGAGAGATGAGTT 59.123 45.833 0.00 0.00 0.00 3.01
9455 10064 6.047870 GGTGTACTAGACGAGAGATGAGTTA 58.952 44.000 0.00 0.00 0.00 2.24
9457 10066 6.757947 GTGTACTAGACGAGAGATGAGTTAGT 59.242 42.308 0.00 0.00 0.00 2.24
9458 10067 7.920151 GTGTACTAGACGAGAGATGAGTTAGTA 59.080 40.741 0.00 0.00 0.00 1.82
9459 10068 8.136800 TGTACTAGACGAGAGATGAGTTAGTAG 58.863 40.741 0.00 0.00 0.00 2.57
9460 10069 7.116075 ACTAGACGAGAGATGAGTTAGTAGT 57.884 40.000 0.00 0.00 0.00 2.73
9462 10071 8.694540 ACTAGACGAGAGATGAGTTAGTAGTAA 58.305 37.037 0.00 0.00 0.00 2.24
9463 10072 9.701098 CTAGACGAGAGATGAGTTAGTAGTAAT 57.299 37.037 0.00 0.00 0.00 1.89
9498 11207 9.765795 AACTTGTAATCTTGATATACTACCAGC 57.234 33.333 0.00 0.00 0.00 4.85
9499 11208 8.368668 ACTTGTAATCTTGATATACTACCAGCC 58.631 37.037 0.00 0.00 0.00 4.85
9500 11209 7.849322 TGTAATCTTGATATACTACCAGCCA 57.151 36.000 0.00 0.00 0.00 4.75
9501 11210 8.435931 TGTAATCTTGATATACTACCAGCCAT 57.564 34.615 0.00 0.00 0.00 4.40
9502 11211 8.314021 TGTAATCTTGATATACTACCAGCCATG 58.686 37.037 0.00 0.00 0.00 3.66
9503 11212 6.942163 ATCTTGATATACTACCAGCCATGT 57.058 37.500 0.00 0.00 0.00 3.21
9504 11213 6.747414 TCTTGATATACTACCAGCCATGTT 57.253 37.500 0.00 0.00 0.00 2.71
9505 11214 6.524734 TCTTGATATACTACCAGCCATGTTG 58.475 40.000 0.00 0.00 0.00 3.33
9506 11215 5.227569 TGATATACTACCAGCCATGTTGG 57.772 43.478 10.97 10.97 41.55 3.77
9507 11216 4.904853 TGATATACTACCAGCCATGTTGGA 59.095 41.667 17.67 3.91 40.96 3.53
9508 11217 5.368230 TGATATACTACCAGCCATGTTGGAA 59.632 40.000 17.67 3.79 40.96 3.53
9509 11218 4.796110 ATACTACCAGCCATGTTGGAAT 57.204 40.909 17.67 7.12 40.96 3.01
9531 11240 8.394121 GGAATATATTTACTTAGCAGCATCAGC 58.606 37.037 0.00 0.00 42.56 4.26
9532 11241 7.856145 ATATATTTACTTAGCAGCATCAGCC 57.144 36.000 0.00 0.00 43.56 4.85
9533 11242 1.939974 TTACTTAGCAGCATCAGCCG 58.060 50.000 0.00 0.00 43.56 5.52
9534 11243 1.111277 TACTTAGCAGCATCAGCCGA 58.889 50.000 0.00 0.00 43.56 5.54
9537 11246 1.067669 CTTAGCAGCATCAGCCGAGTA 59.932 52.381 0.00 0.00 43.56 2.59
9538 11247 1.332195 TAGCAGCATCAGCCGAGTAT 58.668 50.000 0.00 0.00 43.56 2.12
9539 11248 1.332195 AGCAGCATCAGCCGAGTATA 58.668 50.000 0.00 0.00 43.56 1.47
9540 11249 1.898472 AGCAGCATCAGCCGAGTATAT 59.102 47.619 0.00 0.00 43.56 0.86
9542 11251 3.070018 GCAGCATCAGCCGAGTATATTT 58.930 45.455 0.00 0.00 43.56 1.40
9543 11252 4.021104 AGCAGCATCAGCCGAGTATATTTA 60.021 41.667 0.00 0.00 43.56 1.40
9563 11429 3.112709 GCCGAGTCTTGGTCGCAC 61.113 66.667 8.01 0.00 36.06 5.34
9596 11462 2.277591 TGGCCAACCAATCAGCAGC 61.278 57.895 0.61 0.00 45.37 5.25
9601 11467 1.980772 AACCAATCAGCAGCTGGGC 60.981 57.895 22.62 0.95 34.31 5.36
9615 11481 3.908081 GGGCGGCTCCATTGCATG 61.908 66.667 9.56 0.00 36.21 4.06
9686 11556 0.742635 TTGCTGCCGTCGCATATTCA 60.743 50.000 0.00 0.00 46.11 2.57
9687 11557 0.532640 TGCTGCCGTCGCATATTCAT 60.533 50.000 0.00 0.00 46.11 2.57
9688 11558 0.588252 GCTGCCGTCGCATATTCATT 59.412 50.000 0.00 0.00 46.11 2.57
9689 11559 1.398960 GCTGCCGTCGCATATTCATTC 60.399 52.381 0.00 0.00 46.11 2.67
9690 11560 0.858583 TGCCGTCGCATATTCATTCG 59.141 50.000 0.00 0.00 41.12 3.34
9691 11561 1.136690 GCCGTCGCATATTCATTCGA 58.863 50.000 0.00 0.00 34.03 3.71
9703 11573 1.795768 TCATTCGAATATGCTCCGGC 58.204 50.000 10.97 0.00 39.26 6.13
9741 11611 3.034923 CAGCAGCGCGCCTCTATC 61.035 66.667 30.33 10.54 44.04 2.08
9742 11612 3.531207 AGCAGCGCGCCTCTATCA 61.531 61.111 30.33 0.00 44.04 2.15
9743 11613 2.356793 GCAGCGCGCCTCTATCAT 60.357 61.111 30.33 2.66 32.94 2.45
9751 11621 2.565841 GCGCCTCTATCATTTCTTGGT 58.434 47.619 0.00 0.00 0.00 3.67
9753 11623 2.289002 CGCCTCTATCATTTCTTGGTGC 59.711 50.000 0.00 0.00 0.00 5.01
9762 11632 2.459060 TTTCTTGGTGCGAACCGATA 57.541 45.000 8.41 0.00 0.00 2.92
9763 11633 1.717194 TTCTTGGTGCGAACCGATAC 58.283 50.000 8.41 0.00 0.00 2.24
9786 11656 2.717580 TTCGTTGATCGTGCAGTACT 57.282 45.000 0.00 0.00 40.80 2.73
9787 11657 3.835378 TTCGTTGATCGTGCAGTACTA 57.165 42.857 0.00 0.00 40.80 1.82
9788 11658 3.127081 TCGTTGATCGTGCAGTACTAC 57.873 47.619 0.00 0.00 40.80 2.73
9854 11724 3.436704 TCCACTTCTCAATTGATTGCGTC 59.563 43.478 8.96 0.00 37.68 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.617947 GCGGACACCATCTCCTCCTT 61.618 60.000 0.00 0.00 0.00 3.36
116 118 0.802494 ATTTAAGCGGACGCAACTGG 59.198 50.000 19.48 0.00 44.88 4.00
118 120 1.803334 TCATTTAAGCGGACGCAACT 58.197 45.000 19.48 5.41 44.88 3.16
119 121 2.505866 CTTCATTTAAGCGGACGCAAC 58.494 47.619 19.48 0.00 44.88 4.17
131 133 2.622942 GGCCGGATTCATGCTTCATTTA 59.377 45.455 5.05 0.00 0.00 1.40
159 161 3.741476 GCGAGGCAGCCAAACCTG 61.741 66.667 15.80 0.00 36.05 4.00
212 215 3.142838 GGGTTGCGCATCTGCCAT 61.143 61.111 12.75 0.00 37.91 4.40
232 235 2.460275 CGATTCCACGCGCCAATGA 61.460 57.895 5.73 0.00 0.00 2.57
261 273 0.739462 CGCAATACTTGAGCCCGACA 60.739 55.000 0.00 0.00 0.00 4.35
269 281 1.720894 CATGCCGCGCAATACTTGA 59.279 52.632 8.75 0.00 43.62 3.02
289 301 0.673333 CGCACTGCCTTACATGGTGA 60.673 55.000 0.00 0.00 28.27 4.02
291 303 2.040544 GCGCACTGCCTTACATGGT 61.041 57.895 0.30 0.00 37.76 3.55
294 306 2.047274 ACGCGCACTGCCTTACAT 60.047 55.556 5.73 0.00 42.08 2.29
311 323 2.662596 CTGGCGTAAGGGCTGTCA 59.337 61.111 0.00 0.00 42.84 3.58
313 325 4.410400 GCCTGGCGTAAGGGCTGT 62.410 66.667 1.35 0.00 42.31 4.40
324 336 2.583593 GTCTCGTCGATGCCTGGC 60.584 66.667 12.87 12.87 0.00 4.85
325 337 2.278206 CGTCTCGTCGATGCCTGG 60.278 66.667 0.00 0.00 0.00 4.45
329 341 0.248498 TGAATCCGTCTCGTCGATGC 60.248 55.000 0.00 0.00 0.00 3.91
335 347 1.469308 GAGAGTGTGAATCCGTCTCGT 59.531 52.381 0.00 0.00 0.00 4.18
433 445 0.105039 GTGAGGTCGGTGATGGATCC 59.895 60.000 4.20 4.20 0.00 3.36
443 455 1.021390 GCCAGTGAATGTGAGGTCGG 61.021 60.000 0.00 0.00 0.00 4.79
455 467 1.897423 CCCTACACATCGCCAGTGA 59.103 57.895 8.37 0.00 40.16 3.41
469 481 2.044555 CGTCGGAGTCTGTGCCCTA 61.045 63.158 0.00 0.00 0.00 3.53
498 510 2.797278 ATCGTCGTCTCCCATGCCC 61.797 63.158 0.00 0.00 0.00 5.36
512 524 2.485582 CGAGACTCGTGGCATCGT 59.514 61.111 16.83 0.00 34.72 3.73
527 539 1.590525 GTCACGCACCAACTCACGA 60.591 57.895 0.00 0.00 0.00 4.35
541 553 2.159544 GGTAGAGTAGCACACGAGTCAC 60.160 54.545 0.00 0.00 0.00 3.67
544 556 2.358015 GAGGTAGAGTAGCACACGAGT 58.642 52.381 0.00 0.00 0.00 4.18
546 558 1.338484 ACGAGGTAGAGTAGCACACGA 60.338 52.381 0.00 0.00 0.00 4.35
548 560 2.486982 TCAACGAGGTAGAGTAGCACAC 59.513 50.000 0.00 0.00 0.00 3.82
552 564 3.181498 GGTTCTCAACGAGGTAGAGTAGC 60.181 52.174 0.00 0.00 0.00 3.58
554 566 3.005554 CGGTTCTCAACGAGGTAGAGTA 58.994 50.000 0.00 0.00 0.00 2.59
564 576 1.292061 TGTTGGTTCGGTTCTCAACG 58.708 50.000 0.00 0.00 41.45 4.10
592 604 1.454847 TTCGGTGGTTGGCTGCTTT 60.455 52.632 0.00 0.00 0.00 3.51
593 605 2.193536 GTTCGGTGGTTGGCTGCTT 61.194 57.895 0.00 0.00 0.00 3.91
594 606 2.594592 GTTCGGTGGTTGGCTGCT 60.595 61.111 0.00 0.00 0.00 4.24
653 665 2.979401 ACAATTACATGCGCGTGAAA 57.021 40.000 34.95 19.51 0.00 2.69
659 671 5.518812 TCAAATCCATACAATTACATGCGC 58.481 37.500 0.00 0.00 0.00 6.09
704 716 9.374711 ACATCCTAAAAATCCTTTTTCCAACTA 57.625 29.630 1.15 0.00 41.60 2.24
706 718 8.773645 CAACATCCTAAAAATCCTTTTTCCAAC 58.226 33.333 1.15 0.00 41.60 3.77
716 728 4.014406 ACCGGACAACATCCTAAAAATCC 58.986 43.478 9.46 0.00 46.69 3.01
725 737 1.810030 GAGCGACCGGACAACATCC 60.810 63.158 9.46 0.00 45.20 3.51
726 738 0.802607 GAGAGCGACCGGACAACATC 60.803 60.000 9.46 0.00 0.00 3.06
727 739 1.215647 GAGAGCGACCGGACAACAT 59.784 57.895 9.46 0.00 0.00 2.71
768 780 5.365619 ACAACTACAACTTCCAGATTTCGT 58.634 37.500 0.00 0.00 0.00 3.85
769 781 5.924475 ACAACTACAACTTCCAGATTTCG 57.076 39.130 0.00 0.00 0.00 3.46
775 787 5.482908 AGCATCTACAACTACAACTTCCAG 58.517 41.667 0.00 0.00 0.00 3.86
817 829 2.006888 TCTCGATTGGTGAATTTCGGC 58.993 47.619 0.00 0.00 32.67 5.54
892 904 1.976474 GATTTCCCGCCAAGCACCA 60.976 57.895 0.00 0.00 0.00 4.17
994 1006 2.025155 GAGGGAAGAGTACATCGCTGA 58.975 52.381 14.63 0.00 37.20 4.26
1026 1038 1.660560 GGGAGTCGTCGGAATCGGAA 61.661 60.000 0.00 0.00 38.13 4.30
1032 1044 1.378250 GAGGAGGGAGTCGTCGGAA 60.378 63.158 0.00 0.00 30.65 4.30
1108 1120 4.308458 CGTGGGACGGTGCTTGGA 62.308 66.667 0.00 0.00 38.08 3.53
1329 1353 1.579932 GTTGCGAGACTGGACGAGA 59.420 57.895 0.00 0.00 0.00 4.04
1399 1423 2.493973 CTCAGGCTCAGGCTCGAC 59.506 66.667 0.00 0.00 35.88 4.20
1766 1793 1.272490 TGAGAACACCGTCATCACCTC 59.728 52.381 0.00 0.00 0.00 3.85
1812 1839 2.107705 GAGATTCTGCTCGGACGGA 58.892 57.895 0.00 0.00 0.00 4.69
1866 1893 2.660064 AAGCTGACCCTCGCGGAAT 61.660 57.895 6.13 0.00 34.64 3.01
2478 2506 3.205056 AGGACAATTGGGCTCATATTCCA 59.795 43.478 10.83 0.00 0.00 3.53
2488 2516 1.549203 ACATGTGAGGACAATTGGGC 58.451 50.000 10.83 1.05 35.11 5.36
2545 2573 9.113838 GATAAACAATGGAAGCTATCTCAGAAA 57.886 33.333 0.00 0.00 0.00 2.52
2781 2841 1.046472 TATCGGGCCGTTGGTGATCT 61.046 55.000 27.32 3.23 0.00 2.75
2792 2852 1.355210 CGTGCATTTGTATCGGGCC 59.645 57.895 0.00 0.00 0.00 5.80
2805 2865 2.343426 TTTGTTGTGGTGGCGTGCA 61.343 52.632 0.00 0.00 0.00 4.57
2831 2891 1.683011 CCTGTGTATCCTGCCTTTGGG 60.683 57.143 0.00 0.00 0.00 4.12
2834 2894 0.392998 CGCCTGTGTATCCTGCCTTT 60.393 55.000 0.00 0.00 0.00 3.11
2856 2916 1.374947 GGGTGGTGTTGCTGCTCTA 59.625 57.895 0.00 0.00 0.00 2.43
2903 2963 6.259608 CAGGAAATCAACTGCGAAGATAGATT 59.740 38.462 0.00 0.51 0.00 2.40
2914 2974 5.643379 TTTGTATCCAGGAAATCAACTGC 57.357 39.130 0.00 0.00 33.43 4.40
3121 3191 0.104120 CTTATCGGTGCATCGGTCCA 59.896 55.000 21.08 1.38 0.00 4.02
3270 3340 2.646930 CCATGCAGTCTAATGGCAGAA 58.353 47.619 0.00 0.00 41.40 3.02
3355 3427 9.683069 AGTATGAAAACAAAGCAATGAAACTAG 57.317 29.630 0.00 0.00 0.00 2.57
4033 4106 1.444836 AAAAGTATGCGCGGCTAACA 58.555 45.000 8.83 0.00 0.00 2.41
4426 4501 6.121776 TCACCTAAGGAAAGAATGCTTGTA 57.878 37.500 0.00 0.00 40.31 2.41
4544 4622 7.664731 CAGTTTCCTGAAAGAGCATATCCATAT 59.335 37.037 0.00 0.00 41.50 1.78
4551 4629 4.579869 GTCCAGTTTCCTGAAAGAGCATA 58.420 43.478 0.00 0.00 41.50 3.14
5376 5457 8.547967 TGGCTAGTTCTCAAAAGTAGTTTATG 57.452 34.615 0.00 0.00 0.00 1.90
5840 5927 4.101898 TGTGAGGACTGTTAAAAGCACCTA 59.898 41.667 10.73 0.00 30.65 3.08
6058 6145 1.601903 GCGAAGGTCACAATGTTGTCA 59.398 47.619 0.00 0.00 39.91 3.58
6160 6247 6.148645 TCTGTAGCAATACAATTCAGCGAAAA 59.851 34.615 0.00 0.00 0.00 2.29
6161 6248 5.641636 TCTGTAGCAATACAATTCAGCGAAA 59.358 36.000 0.00 0.00 0.00 3.46
6181 6268 1.003355 CAGTTGCGGGGATGTCTGT 60.003 57.895 0.00 0.00 0.00 3.41
6658 6747 8.283291 ACGAAAGTAAGTGTGAAATTCTGAATC 58.717 33.333 2.92 0.00 46.88 2.52
6659 6748 8.154649 ACGAAAGTAAGTGTGAAATTCTGAAT 57.845 30.769 0.00 0.00 46.88 2.57
6926 7015 0.981277 TGGCCTAACCTGACCTAGCC 60.981 60.000 3.32 0.00 40.22 3.93
7055 7144 2.816672 GCCCATACCTAGGTACTCGTAC 59.183 54.545 24.07 8.09 41.75 3.67
7056 7145 2.442878 TGCCCATACCTAGGTACTCGTA 59.557 50.000 24.07 10.25 41.75 3.43
7057 7146 1.216175 TGCCCATACCTAGGTACTCGT 59.784 52.381 24.07 5.31 41.75 4.18
7058 7147 1.887198 CTGCCCATACCTAGGTACTCG 59.113 57.143 24.07 14.61 41.75 4.18
7059 7148 2.628657 CACTGCCCATACCTAGGTACTC 59.371 54.545 24.07 12.93 41.75 2.59
7060 7149 2.023307 ACACTGCCCATACCTAGGTACT 60.023 50.000 24.07 10.49 46.37 2.73
7242 7332 4.379652 ACCAAGCAAAAGCAAACCAATAG 58.620 39.130 0.00 0.00 0.00 1.73
7278 7368 4.620589 AACATTGAAATGCCACCATTCA 57.379 36.364 2.92 0.00 40.69 2.57
7524 7978 6.757010 AGCAATAGTGTGTGTATAGCAGTTAC 59.243 38.462 0.00 0.00 0.00 2.50
7528 7982 6.739112 TCTAGCAATAGTGTGTGTATAGCAG 58.261 40.000 0.00 0.00 0.00 4.24
7551 8005 5.841957 ATATCAAGTGTGCCCATTTTCTC 57.158 39.130 0.00 0.00 0.00 2.87
7599 8053 9.546428 CATGGAAGTGTGATCATAAGTAACATA 57.454 33.333 0.00 0.00 0.00 2.29
8070 8526 8.510243 ACAATGTATAAACTGATGATCTGCAA 57.490 30.769 0.00 0.00 0.00 4.08
8143 8602 9.071276 CCATTGATAAAAGCCTATTGAGTACAT 57.929 33.333 0.00 0.00 0.00 2.29
8144 8603 8.052748 ACCATTGATAAAAGCCTATTGAGTACA 58.947 33.333 0.00 0.00 0.00 2.90
8145 8604 8.451908 ACCATTGATAAAAGCCTATTGAGTAC 57.548 34.615 0.00 0.00 0.00 2.73
8147 8606 9.646522 ATTACCATTGATAAAAGCCTATTGAGT 57.353 29.630 0.00 0.00 0.00 3.41
8151 8610 9.965824 CGAAATTACCATTGATAAAAGCCTATT 57.034 29.630 0.00 0.00 0.00 1.73
8152 8611 9.131791 ACGAAATTACCATTGATAAAAGCCTAT 57.868 29.630 0.00 0.00 0.00 2.57
8153 8612 8.514330 ACGAAATTACCATTGATAAAAGCCTA 57.486 30.769 0.00 0.00 0.00 3.93
8154 8613 7.339466 AGACGAAATTACCATTGATAAAAGCCT 59.661 33.333 0.00 0.00 0.00 4.58
8155 8614 7.480810 AGACGAAATTACCATTGATAAAAGCC 58.519 34.615 0.00 0.00 0.00 4.35
8156 8615 8.181573 TGAGACGAAATTACCATTGATAAAAGC 58.818 33.333 0.00 0.00 0.00 3.51
8157 8616 9.708222 CTGAGACGAAATTACCATTGATAAAAG 57.292 33.333 0.00 0.00 0.00 2.27
8158 8617 9.226606 ACTGAGACGAAATTACCATTGATAAAA 57.773 29.630 0.00 0.00 0.00 1.52
8159 8618 8.786826 ACTGAGACGAAATTACCATTGATAAA 57.213 30.769 0.00 0.00 0.00 1.40
8160 8619 8.786826 AACTGAGACGAAATTACCATTGATAA 57.213 30.769 0.00 0.00 0.00 1.75
8198 8657 1.541379 ACAGCAAGCATCAGCAATCA 58.459 45.000 0.00 0.00 45.49 2.57
8287 8746 0.833287 GGAGCCAGAACAGCCATCTA 59.167 55.000 0.00 0.00 0.00 1.98
8303 8762 2.124983 CATGGGGTGTGCTCGGAG 60.125 66.667 0.00 0.00 0.00 4.63
8306 8765 2.438975 ATGCATGGGGTGTGCTCG 60.439 61.111 0.00 0.00 42.92 5.03
8455 8914 5.992829 TCAGATAAAACTTAGCACGGAACAA 59.007 36.000 0.00 0.00 0.00 2.83
8550 9009 5.705609 ACCAATCACAGTGGAAAATGTAC 57.294 39.130 0.00 0.00 39.62 2.90
8663 9122 1.501169 CATGCATAATCCTCGCGACA 58.499 50.000 3.71 0.00 0.00 4.35
8767 9226 7.065324 CGGTGGAAAGACAAGCTATACATAAAA 59.935 37.037 0.00 0.00 0.00 1.52
8823 9408 1.273606 CCATATAGCGTCCCCTGTCAG 59.726 57.143 0.00 0.00 0.00 3.51
8825 9410 1.546476 CTCCATATAGCGTCCCCTGTC 59.454 57.143 0.00 0.00 0.00 3.51
8887 9475 3.570550 CACCCTTCCCAACGAATTTAACA 59.429 43.478 0.00 0.00 0.00 2.41
8902 9490 7.391148 TTTGCTTGTAGATTATTCACCCTTC 57.609 36.000 0.00 0.00 0.00 3.46
8916 9504 4.479619 GGTTCTGATTGCTTTGCTTGTAG 58.520 43.478 0.00 0.00 0.00 2.74
8917 9505 3.058293 CGGTTCTGATTGCTTTGCTTGTA 60.058 43.478 0.00 0.00 0.00 2.41
8918 9506 2.287788 CGGTTCTGATTGCTTTGCTTGT 60.288 45.455 0.00 0.00 0.00 3.16
8919 9507 2.287788 ACGGTTCTGATTGCTTTGCTTG 60.288 45.455 0.00 0.00 0.00 4.01
8920 9508 1.956477 ACGGTTCTGATTGCTTTGCTT 59.044 42.857 0.00 0.00 0.00 3.91
8922 9510 2.053627 CAACGGTTCTGATTGCTTTGC 58.946 47.619 0.00 0.00 0.00 3.68
8923 9511 3.003689 AGACAACGGTTCTGATTGCTTTG 59.996 43.478 0.00 0.00 0.00 2.77
8924 9512 3.214328 AGACAACGGTTCTGATTGCTTT 58.786 40.909 0.00 0.00 0.00 3.51
8955 9543 5.932619 ATGTACTGTACATTGTAGCCTGA 57.067 39.130 23.99 0.00 46.69 3.86
9055 9645 3.769844 GTGAACAGAGGGAGTATTGGAGA 59.230 47.826 0.00 0.00 0.00 3.71
9064 9654 5.467063 GTCTTACAAAAGTGAACAGAGGGAG 59.533 44.000 0.00 0.00 34.13 4.30
9066 9656 4.211374 CGTCTTACAAAAGTGAACAGAGGG 59.789 45.833 0.00 0.00 34.13 4.30
9067 9657 4.809426 ACGTCTTACAAAAGTGAACAGAGG 59.191 41.667 0.00 0.00 34.13 3.69
9068 9658 5.968387 ACGTCTTACAAAAGTGAACAGAG 57.032 39.130 0.00 0.00 34.13 3.35
9075 9665 6.627671 GCTGTCTAAAACGTCTTACAAAAGTG 59.372 38.462 0.00 0.00 34.13 3.16
9076 9666 6.537660 AGCTGTCTAAAACGTCTTACAAAAGT 59.462 34.615 0.00 0.00 34.13 2.66
9080 9670 5.593968 TCAGCTGTCTAAAACGTCTTACAA 58.406 37.500 14.67 0.00 0.00 2.41
9083 9673 7.542534 TTTTTCAGCTGTCTAAAACGTCTTA 57.457 32.000 14.67 0.00 0.00 2.10
9084 9674 6.431198 TTTTTCAGCTGTCTAAAACGTCTT 57.569 33.333 14.67 0.00 0.00 3.01
9085 9675 6.564125 CGATTTTTCAGCTGTCTAAAACGTCT 60.564 38.462 14.67 4.70 0.00 4.18
9086 9676 5.560378 CGATTTTTCAGCTGTCTAAAACGTC 59.440 40.000 14.67 11.92 0.00 4.34
9089 9679 7.112148 CAGTTCGATTTTTCAGCTGTCTAAAAC 59.888 37.037 14.67 10.06 0.00 2.43
9090 9680 7.132213 CAGTTCGATTTTTCAGCTGTCTAAAA 58.868 34.615 14.67 17.43 0.00 1.52
9091 9681 6.260050 ACAGTTCGATTTTTCAGCTGTCTAAA 59.740 34.615 14.67 12.46 31.04 1.85
9092 9682 5.758296 ACAGTTCGATTTTTCAGCTGTCTAA 59.242 36.000 14.67 6.61 31.04 2.10
9093 9683 5.297547 ACAGTTCGATTTTTCAGCTGTCTA 58.702 37.500 14.67 0.00 31.04 2.59
9094 9684 4.130118 ACAGTTCGATTTTTCAGCTGTCT 58.870 39.130 14.67 0.00 31.04 3.41
9095 9685 4.474226 ACAGTTCGATTTTTCAGCTGTC 57.526 40.909 14.67 2.10 31.04 3.51
9096 9686 4.900635 AACAGTTCGATTTTTCAGCTGT 57.099 36.364 14.67 0.00 37.32 4.40
9097 9687 5.340667 GCTAAACAGTTCGATTTTTCAGCTG 59.659 40.000 7.63 7.63 0.00 4.24
9098 9688 5.239525 AGCTAAACAGTTCGATTTTTCAGCT 59.760 36.000 0.00 0.00 0.00 4.24
9099 9689 5.340667 CAGCTAAACAGTTCGATTTTTCAGC 59.659 40.000 0.00 0.00 0.00 4.26
9100 9690 6.430451 ACAGCTAAACAGTTCGATTTTTCAG 58.570 36.000 0.00 0.00 0.00 3.02
9101 9691 6.371809 ACAGCTAAACAGTTCGATTTTTCA 57.628 33.333 0.00 0.00 0.00 2.69
9102 9692 6.691388 ACAACAGCTAAACAGTTCGATTTTTC 59.309 34.615 0.00 0.00 0.00 2.29
9103 9693 6.560711 ACAACAGCTAAACAGTTCGATTTTT 58.439 32.000 0.00 0.00 0.00 1.94
9104 9694 6.038271 AGACAACAGCTAAACAGTTCGATTTT 59.962 34.615 0.00 0.00 0.00 1.82
9105 9695 5.527582 AGACAACAGCTAAACAGTTCGATTT 59.472 36.000 0.00 0.00 0.00 2.17
9106 9696 5.057149 AGACAACAGCTAAACAGTTCGATT 58.943 37.500 0.00 0.00 0.00 3.34
9107 9697 4.632153 AGACAACAGCTAAACAGTTCGAT 58.368 39.130 0.00 0.00 0.00 3.59
9108 9698 4.054780 AGACAACAGCTAAACAGTTCGA 57.945 40.909 0.00 0.00 0.00 3.71
9109 9699 4.795970 AAGACAACAGCTAAACAGTTCG 57.204 40.909 0.00 0.00 0.00 3.95
9110 9700 8.129211 ACATTTAAGACAACAGCTAAACAGTTC 58.871 33.333 0.00 0.00 0.00 3.01
9111 9701 7.996385 ACATTTAAGACAACAGCTAAACAGTT 58.004 30.769 0.00 0.00 0.00 3.16
9112 9702 7.499232 AGACATTTAAGACAACAGCTAAACAGT 59.501 33.333 0.00 0.00 0.00 3.55
9113 9703 7.865707 AGACATTTAAGACAACAGCTAAACAG 58.134 34.615 0.00 0.00 0.00 3.16
9114 9704 7.801716 AGACATTTAAGACAACAGCTAAACA 57.198 32.000 0.00 0.00 0.00 2.83
9118 9708 8.492748 CGTTTTAGACATTTAAGACAACAGCTA 58.507 33.333 0.00 0.00 0.00 3.32
9119 9709 7.012044 ACGTTTTAGACATTTAAGACAACAGCT 59.988 33.333 0.00 0.00 0.00 4.24
9120 9710 7.130269 ACGTTTTAGACATTTAAGACAACAGC 58.870 34.615 0.00 0.00 0.00 4.40
9121 9711 8.548721 AGACGTTTTAGACATTTAAGACAACAG 58.451 33.333 0.00 0.00 0.00 3.16
9122 9712 8.428186 AGACGTTTTAGACATTTAAGACAACA 57.572 30.769 0.00 0.00 0.00 3.33
9125 9715 9.531942 TGTAAGACGTTTTAGACATTTAAGACA 57.468 29.630 0.00 0.00 0.00 3.41
9134 9724 9.493206 GTTCAATTTTGTAAGACGTTTTAGACA 57.507 29.630 0.00 0.00 0.00 3.41
9135 9725 9.712359 AGTTCAATTTTGTAAGACGTTTTAGAC 57.288 29.630 0.00 0.00 0.00 2.59
9136 9726 9.710979 CAGTTCAATTTTGTAAGACGTTTTAGA 57.289 29.630 0.00 0.00 0.00 2.10
9137 9727 9.710979 TCAGTTCAATTTTGTAAGACGTTTTAG 57.289 29.630 0.00 0.00 0.00 1.85
9138 9728 9.710979 CTCAGTTCAATTTTGTAAGACGTTTTA 57.289 29.630 0.00 0.00 0.00 1.52
9139 9729 7.700656 CCTCAGTTCAATTTTGTAAGACGTTTT 59.299 33.333 0.00 0.00 0.00 2.43
9140 9730 7.193595 CCTCAGTTCAATTTTGTAAGACGTTT 58.806 34.615 0.00 0.00 0.00 3.60
9141 9731 6.238648 CCCTCAGTTCAATTTTGTAAGACGTT 60.239 38.462 0.00 0.00 0.00 3.99
9142 9732 5.238650 CCCTCAGTTCAATTTTGTAAGACGT 59.761 40.000 0.00 0.00 0.00 4.34
9143 9733 5.468746 TCCCTCAGTTCAATTTTGTAAGACG 59.531 40.000 0.00 0.00 0.00 4.18
9144 9734 6.486993 ACTCCCTCAGTTCAATTTTGTAAGAC 59.513 38.462 0.00 0.00 26.56 3.01
9145 9735 6.601332 ACTCCCTCAGTTCAATTTTGTAAGA 58.399 36.000 0.00 0.00 26.56 2.10
9146 9736 6.884280 ACTCCCTCAGTTCAATTTTGTAAG 57.116 37.500 0.00 0.00 26.56 2.34
9147 9737 7.514721 ACTACTCCCTCAGTTCAATTTTGTAA 58.485 34.615 0.00 0.00 36.43 2.41
9148 9738 7.074653 ACTACTCCCTCAGTTCAATTTTGTA 57.925 36.000 0.00 0.00 36.43 2.41
9149 9739 5.941788 ACTACTCCCTCAGTTCAATTTTGT 58.058 37.500 0.00 0.00 36.43 2.83
9150 9740 6.263168 ACAACTACTCCCTCAGTTCAATTTTG 59.737 38.462 0.00 0.00 36.43 2.44
9151 9741 6.365520 ACAACTACTCCCTCAGTTCAATTTT 58.634 36.000 0.00 0.00 36.43 1.82
9152 9742 5.941788 ACAACTACTCCCTCAGTTCAATTT 58.058 37.500 0.00 0.00 36.43 1.82
9153 9743 5.568620 ACAACTACTCCCTCAGTTCAATT 57.431 39.130 0.00 0.00 36.43 2.32
9154 9744 5.568620 AACAACTACTCCCTCAGTTCAAT 57.431 39.130 0.00 0.00 36.43 2.57
9155 9745 6.295688 GGATAACAACTACTCCCTCAGTTCAA 60.296 42.308 0.00 0.00 36.43 2.69
9156 9746 5.187186 GGATAACAACTACTCCCTCAGTTCA 59.813 44.000 0.00 0.00 36.43 3.18
9157 9747 5.395435 GGGATAACAACTACTCCCTCAGTTC 60.395 48.000 0.00 0.00 43.45 3.01
9158 9748 4.470304 GGGATAACAACTACTCCCTCAGTT 59.530 45.833 0.00 0.00 43.45 3.16
9159 9749 4.031611 GGGATAACAACTACTCCCTCAGT 58.968 47.826 0.00 0.00 43.45 3.41
9160 9750 3.068307 CGGGATAACAACTACTCCCTCAG 59.932 52.174 5.04 0.00 44.42 3.35
9161 9751 3.028850 CGGGATAACAACTACTCCCTCA 58.971 50.000 5.04 0.00 44.42 3.86
9162 9752 3.029570 ACGGGATAACAACTACTCCCTC 58.970 50.000 5.04 0.00 44.42 4.30
9163 9753 2.764572 CACGGGATAACAACTACTCCCT 59.235 50.000 5.04 0.00 44.42 4.20
9164 9754 2.498885 ACACGGGATAACAACTACTCCC 59.501 50.000 0.00 0.00 43.37 4.30
9165 9755 3.518590 CACACGGGATAACAACTACTCC 58.481 50.000 0.00 0.00 0.00 3.85
9166 9756 2.928116 GCACACGGGATAACAACTACTC 59.072 50.000 0.00 0.00 0.00 2.59
9167 9757 2.565834 AGCACACGGGATAACAACTACT 59.434 45.455 0.00 0.00 0.00 2.57
9168 9758 2.671396 CAGCACACGGGATAACAACTAC 59.329 50.000 0.00 0.00 0.00 2.73
9169 9759 2.563620 TCAGCACACGGGATAACAACTA 59.436 45.455 0.00 0.00 0.00 2.24
9170 9760 1.346395 TCAGCACACGGGATAACAACT 59.654 47.619 0.00 0.00 0.00 3.16
9171 9761 1.803334 TCAGCACACGGGATAACAAC 58.197 50.000 0.00 0.00 0.00 3.32
9172 9762 2.552599 TTCAGCACACGGGATAACAA 57.447 45.000 0.00 0.00 0.00 2.83
9173 9763 2.422597 CTTTCAGCACACGGGATAACA 58.577 47.619 0.00 0.00 0.00 2.41
9174 9764 1.130561 GCTTTCAGCACACGGGATAAC 59.869 52.381 0.00 0.00 41.89 1.89
9175 9765 1.003118 AGCTTTCAGCACACGGGATAA 59.997 47.619 0.00 0.00 45.56 1.75
9176 9766 0.613260 AGCTTTCAGCACACGGGATA 59.387 50.000 0.00 0.00 45.56 2.59
9177 9767 0.957395 CAGCTTTCAGCACACGGGAT 60.957 55.000 0.00 0.00 45.56 3.85
9178 9768 1.597854 CAGCTTTCAGCACACGGGA 60.598 57.895 0.00 0.00 45.56 5.14
9179 9769 0.957395 ATCAGCTTTCAGCACACGGG 60.957 55.000 0.00 0.00 45.56 5.28
9180 9770 0.445436 GATCAGCTTTCAGCACACGG 59.555 55.000 0.00 0.00 45.56 4.94
9181 9771 0.094216 CGATCAGCTTTCAGCACACG 59.906 55.000 0.00 0.00 45.56 4.49
9182 9772 0.179205 GCGATCAGCTTTCAGCACAC 60.179 55.000 0.00 0.00 45.56 3.82
9183 9773 1.300971 GGCGATCAGCTTTCAGCACA 61.301 55.000 8.94 0.00 45.56 4.57
9184 9774 1.427020 GGCGATCAGCTTTCAGCAC 59.573 57.895 8.94 0.00 45.56 4.40
9185 9775 2.102438 CGGCGATCAGCTTTCAGCA 61.102 57.895 0.00 0.00 45.56 4.41
9192 9782 3.908285 TGGAAACAACGGCGATCAGCT 62.908 52.381 16.62 0.00 41.78 4.24
9207 9797 3.675775 GCGCCTCTGCAAATTTATGGAAA 60.676 43.478 0.00 0.00 37.32 3.13
9247 9838 1.612442 TGGTGTCCCCTCTGCTACC 60.612 63.158 0.00 0.00 0.00 3.18
9249 9840 1.990060 GCTGGTGTCCCCTCTGCTA 60.990 63.158 0.00 0.00 0.00 3.49
9273 9864 3.123804 GCATACATACTTCACACCGGAG 58.876 50.000 9.46 1.26 0.00 4.63
9274 9865 2.498078 TGCATACATACTTCACACCGGA 59.502 45.455 9.46 0.00 0.00 5.14
9275 9866 2.899976 TGCATACATACTTCACACCGG 58.100 47.619 0.00 0.00 0.00 5.28
9289 9880 1.514014 CCGGCGTTTGCTTGCATAC 60.514 57.895 6.01 6.20 42.25 2.39
9305 9899 0.886490 ACAGCTTGACTGAAAGGCCG 60.886 55.000 0.00 0.00 46.74 6.13
9328 9922 4.802051 CACGGCCAGACCCCCATG 62.802 72.222 2.24 0.00 33.26 3.66
9329 9923 3.935456 TACACGGCCAGACCCCCAT 62.935 63.158 2.24 0.00 33.26 4.00
9330 9924 4.642488 TACACGGCCAGACCCCCA 62.642 66.667 2.24 0.00 33.26 4.96
9331 9925 3.324108 TTACACGGCCAGACCCCC 61.324 66.667 2.24 0.00 33.26 5.40
9332 9926 1.623542 ATCTTACACGGCCAGACCCC 61.624 60.000 2.24 0.00 33.26 4.95
9333 9927 1.068741 CTATCTTACACGGCCAGACCC 59.931 57.143 2.24 0.00 33.26 4.46
9334 9928 1.538419 GCTATCTTACACGGCCAGACC 60.538 57.143 2.24 0.00 0.00 3.85
9335 9929 1.854227 GCTATCTTACACGGCCAGAC 58.146 55.000 2.24 0.00 0.00 3.51
9336 9930 0.384309 CGCTATCTTACACGGCCAGA 59.616 55.000 2.24 0.00 0.00 3.86
9337 9931 0.597637 CCGCTATCTTACACGGCCAG 60.598 60.000 2.24 0.00 39.08 4.85
9338 9932 1.440060 CCGCTATCTTACACGGCCA 59.560 57.895 2.24 0.00 39.08 5.36
9339 9933 1.300697 CCCGCTATCTTACACGGCC 60.301 63.158 0.00 0.00 44.29 6.13
9340 9934 0.596859 GACCCGCTATCTTACACGGC 60.597 60.000 0.00 0.00 44.29 5.68
9341 9935 0.742505 TGACCCGCTATCTTACACGG 59.257 55.000 0.00 0.00 45.21 4.94
9342 9936 1.864435 GCTGACCCGCTATCTTACACG 60.864 57.143 0.00 0.00 0.00 4.49
9343 9937 1.538419 GGCTGACCCGCTATCTTACAC 60.538 57.143 0.00 0.00 0.00 2.90
9372 9966 1.130054 TGTCTCCCTGCTTCTGCCTT 61.130 55.000 0.00 0.00 38.71 4.35
9377 9971 1.830477 GTCTCATGTCTCCCTGCTTCT 59.170 52.381 0.00 0.00 0.00 2.85
9378 9972 1.552337 TGTCTCATGTCTCCCTGCTTC 59.448 52.381 0.00 0.00 0.00 3.86
9385 9979 4.478206 TCAGGAAATGTCTCATGTCTCC 57.522 45.455 0.00 0.63 0.00 3.71
9388 9982 8.498054 TCTTTAATCAGGAAATGTCTCATGTC 57.502 34.615 0.00 0.00 0.00 3.06
9390 9984 9.565213 GTTTCTTTAATCAGGAAATGTCTCATG 57.435 33.333 0.00 0.00 32.71 3.07
9391 9985 9.300681 TGTTTCTTTAATCAGGAAATGTCTCAT 57.699 29.630 0.00 0.00 32.71 2.90
9421 10030 3.613432 CGTCTAGTACACCACTGGTTTCC 60.613 52.174 0.00 0.00 38.24 3.13
9432 10041 6.757947 ACTAACTCATCTCTCGTCTAGTACAC 59.242 42.308 0.00 0.00 0.00 2.90
9434 10043 8.137437 ACTACTAACTCATCTCTCGTCTAGTAC 58.863 40.741 0.00 0.00 0.00 2.73
9481 10178 6.464322 CCAACATGGCTGGTAGTATATCAAGA 60.464 42.308 7.73 0.00 26.56 3.02
9486 11195 5.904984 TTCCAACATGGCTGGTAGTATAT 57.095 39.130 13.98 0.00 37.47 0.86
9487 11196 5.904984 ATTCCAACATGGCTGGTAGTATA 57.095 39.130 13.98 0.00 37.47 1.47
9490 11199 4.796110 ATATTCCAACATGGCTGGTAGT 57.204 40.909 13.98 6.13 37.47 2.73
9494 11203 7.765695 AGTAAATATATTCCAACATGGCTGG 57.234 36.000 9.32 9.32 37.47 4.85
9496 11205 9.014297 GCTAAGTAAATATATTCCAACATGGCT 57.986 33.333 0.00 0.00 37.47 4.75
9497 11206 8.792633 TGCTAAGTAAATATATTCCAACATGGC 58.207 33.333 0.00 5.57 37.47 4.40
9499 11208 9.831737 GCTGCTAAGTAAATATATTCCAACATG 57.168 33.333 0.00 0.00 0.00 3.21
9500 11209 9.573166 TGCTGCTAAGTAAATATATTCCAACAT 57.427 29.630 0.00 0.00 0.00 2.71
9501 11210 8.972458 TGCTGCTAAGTAAATATATTCCAACA 57.028 30.769 0.00 0.00 0.00 3.33
9503 11212 9.791801 TGATGCTGCTAAGTAAATATATTCCAA 57.208 29.630 0.00 0.00 0.00 3.53
9504 11213 9.440773 CTGATGCTGCTAAGTAAATATATTCCA 57.559 33.333 0.00 0.00 0.00 3.53
9505 11214 8.394121 GCTGATGCTGCTAAGTAAATATATTCC 58.606 37.037 0.00 0.00 36.03 3.01
9506 11215 8.394121 GGCTGATGCTGCTAAGTAAATATATTC 58.606 37.037 0.00 0.00 39.59 1.75
9507 11216 7.065085 CGGCTGATGCTGCTAAGTAAATATATT 59.935 37.037 0.00 0.00 38.88 1.28
9508 11217 6.536582 CGGCTGATGCTGCTAAGTAAATATAT 59.463 38.462 0.00 0.00 38.88 0.86
9509 11218 5.869344 CGGCTGATGCTGCTAAGTAAATATA 59.131 40.000 0.00 0.00 38.88 0.86
9531 11240 2.227388 ACTCGGCGGTAAATATACTCGG 59.773 50.000 7.21 0.00 32.36 4.63
9532 11241 3.188048 AGACTCGGCGGTAAATATACTCG 59.812 47.826 7.21 0.00 32.36 4.18
9533 11242 4.762956 AGACTCGGCGGTAAATATACTC 57.237 45.455 7.21 0.00 32.36 2.59
9534 11243 4.261909 CCAAGACTCGGCGGTAAATATACT 60.262 45.833 7.21 0.00 32.36 2.12
9537 11246 2.433239 ACCAAGACTCGGCGGTAAATAT 59.567 45.455 7.21 0.00 0.00 1.28
9538 11247 1.826720 ACCAAGACTCGGCGGTAAATA 59.173 47.619 7.21 0.00 0.00 1.40
9539 11248 0.611714 ACCAAGACTCGGCGGTAAAT 59.388 50.000 7.21 0.00 0.00 1.40
9540 11249 0.037975 GACCAAGACTCGGCGGTAAA 60.038 55.000 7.21 0.00 0.00 2.01
9542 11251 2.693762 CGACCAAGACTCGGCGGTA 61.694 63.158 7.21 0.00 0.00 4.02
9543 11252 4.052229 CGACCAAGACTCGGCGGT 62.052 66.667 7.21 3.45 0.00 5.68
9563 11429 0.954452 GGCCAGTCAACTCCAACAAG 59.046 55.000 0.00 0.00 0.00 3.16
9644 11510 1.526575 AATGAAGCTGCCCACAACCG 61.527 55.000 0.00 0.00 0.00 4.44
9648 11514 0.901114 ATGCAATGAAGCTGCCCACA 60.901 50.000 0.00 0.00 39.13 4.17
9686 11556 2.675317 GCTAGCCGGAGCATATTCGAAT 60.675 50.000 16.15 16.15 42.36 3.34
9687 11557 1.336887 GCTAGCCGGAGCATATTCGAA 60.337 52.381 5.05 0.00 42.36 3.71
9688 11558 0.243907 GCTAGCCGGAGCATATTCGA 59.756 55.000 5.05 0.00 42.36 3.71
9689 11559 2.743195 GCTAGCCGGAGCATATTCG 58.257 57.895 5.05 0.00 42.36 3.34
9703 11573 4.814294 GGACCCGCACCGTGCTAG 62.814 72.222 20.87 13.89 42.25 3.42
9728 11598 0.390860 AGAAATGATAGAGGCGCGCT 59.609 50.000 32.29 17.27 0.00 5.92
9729 11599 1.070309 CAAGAAATGATAGAGGCGCGC 60.070 52.381 25.94 25.94 0.00 6.86
9730 11600 1.528586 CCAAGAAATGATAGAGGCGCG 59.471 52.381 0.00 0.00 0.00 6.86
9731 11601 2.289002 CACCAAGAAATGATAGAGGCGC 59.711 50.000 0.00 0.00 0.00 6.53
9733 11603 2.289002 CGCACCAAGAAATGATAGAGGC 59.711 50.000 0.00 0.00 0.00 4.70
9735 11605 4.034510 GGTTCGCACCAAGAAATGATAGAG 59.965 45.833 0.00 0.00 43.61 2.43
9736 11606 3.938963 GGTTCGCACCAAGAAATGATAGA 59.061 43.478 0.00 0.00 43.61 1.98
9737 11607 3.242413 CGGTTCGCACCAAGAAATGATAG 60.242 47.826 4.79 0.00 44.53 2.08
9738 11608 2.675844 CGGTTCGCACCAAGAAATGATA 59.324 45.455 4.79 0.00 44.53 2.15
9740 11610 0.871722 CGGTTCGCACCAAGAAATGA 59.128 50.000 4.79 0.00 44.53 2.57
9741 11611 0.871722 TCGGTTCGCACCAAGAAATG 59.128 50.000 4.79 0.00 44.53 2.32
9742 11612 1.821216 ATCGGTTCGCACCAAGAAAT 58.179 45.000 4.79 0.00 44.53 2.17
9743 11613 2.070783 GTATCGGTTCGCACCAAGAAA 58.929 47.619 4.79 0.00 44.53 2.52
9751 11621 0.528901 CGAATGGGTATCGGTTCGCA 60.529 55.000 0.00 0.00 37.29 5.10
9753 11623 1.591158 CAACGAATGGGTATCGGTTCG 59.409 52.381 9.11 9.11 46.29 3.95
9762 11632 0.321210 TGCACGATCAACGAATGGGT 60.321 50.000 0.00 0.00 45.77 4.51
9763 11633 0.374758 CTGCACGATCAACGAATGGG 59.625 55.000 0.00 0.00 45.77 4.00
9786 11656 2.571757 CACCGCCTCAAGCTCGTA 59.428 61.111 0.00 0.00 40.39 3.43
9808 11678 2.331451 GGACAAACACTGCCGCAC 59.669 61.111 0.00 0.00 0.00 5.34
9810 11680 4.025401 CCGGACAAACACTGCCGC 62.025 66.667 0.00 0.00 40.94 6.53
9811 11681 1.289109 CTACCGGACAAACACTGCCG 61.289 60.000 9.46 0.00 41.53 5.69
9812 11682 0.034337 TCTACCGGACAAACACTGCC 59.966 55.000 9.46 0.00 0.00 4.85
9817 11687 2.253610 AGTGGATCTACCGGACAAACA 58.746 47.619 9.46 0.00 42.61 2.83
9854 11724 2.735772 CGGTGGAGTGATGGGAGGG 61.736 68.421 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.