Multiple sequence alignment - TraesCS2B01G361800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G361800 | chr2B | 100.000 | 5387 | 0 | 0 | 1 | 5387 | 514866487 | 514861101 | 0.000000e+00 | 9949.0 |
1 | TraesCS2B01G361800 | chr2B | 84.197 | 386 | 41 | 15 | 156 | 525 | 30332839 | 30333220 | 1.850000e-94 | 357.0 |
2 | TraesCS2B01G361800 | chr2B | 96.923 | 65 | 2 | 0 | 8 | 72 | 321689838 | 321689902 | 5.700000e-20 | 110.0 |
3 | TraesCS2B01G361800 | chr2B | 95.161 | 62 | 3 | 0 | 11 | 72 | 264582693 | 264582632 | 1.230000e-16 | 99.0 |
4 | TraesCS2B01G361800 | chr2D | 91.389 | 4657 | 239 | 85 | 143 | 4684 | 436368273 | 436372882 | 0.000000e+00 | 6229.0 |
5 | TraesCS2B01G361800 | chr2D | 98.123 | 373 | 6 | 1 | 5015 | 5387 | 436373237 | 436373608 | 0.000000e+00 | 649.0 |
6 | TraesCS2B01G361800 | chr2D | 84.000 | 225 | 25 | 7 | 4443 | 4656 | 120561490 | 120561266 | 7.070000e-49 | 206.0 |
7 | TraesCS2B01G361800 | chr2D | 95.455 | 66 | 2 | 1 | 4678 | 4743 | 134301484 | 134301548 | 2.650000e-18 | 104.0 |
8 | TraesCS2B01G361800 | chr2D | 89.706 | 68 | 3 | 2 | 9 | 72 | 49876873 | 49876806 | 3.460000e-12 | 84.2 |
9 | TraesCS2B01G361800 | chr2D | 100.000 | 33 | 0 | 0 | 50 | 82 | 645728667 | 645728699 | 1.620000e-05 | 62.1 |
10 | TraesCS2B01G361800 | chr2A | 92.437 | 3702 | 195 | 41 | 141 | 3825 | 550538381 | 550542014 | 0.000000e+00 | 5206.0 |
11 | TraesCS2B01G361800 | chr2A | 89.425 | 643 | 40 | 14 | 3823 | 4443 | 550542054 | 550542690 | 0.000000e+00 | 785.0 |
12 | TraesCS2B01G361800 | chr2A | 83.910 | 752 | 91 | 17 | 1936 | 2678 | 723566176 | 723566906 | 0.000000e+00 | 691.0 |
13 | TraesCS2B01G361800 | chr2A | 92.708 | 480 | 32 | 3 | 4836 | 5315 | 550542685 | 550543161 | 0.000000e+00 | 689.0 |
14 | TraesCS2B01G361800 | chr2A | 98.261 | 115 | 2 | 0 | 5273 | 5387 | 550543162 | 550543276 | 9.150000e-48 | 202.0 |
15 | TraesCS2B01G361800 | chr2A | 79.139 | 302 | 50 | 7 | 1580 | 1881 | 723565882 | 723566170 | 4.260000e-46 | 196.0 |
16 | TraesCS2B01G361800 | chr2A | 78.929 | 280 | 30 | 11 | 4439 | 4689 | 158051292 | 158051013 | 4.320000e-36 | 163.0 |
17 | TraesCS2B01G361800 | chr2A | 85.629 | 167 | 9 | 2 | 4680 | 4831 | 275929399 | 275929233 | 1.550000e-35 | 161.0 |
18 | TraesCS2B01G361800 | chr2A | 83.140 | 172 | 14 | 8 | 4679 | 4835 | 522841263 | 522841434 | 5.620000e-30 | 143.0 |
19 | TraesCS2B01G361800 | chr7D | 84.176 | 752 | 90 | 15 | 1936 | 2678 | 31965561 | 31964830 | 0.000000e+00 | 702.0 |
20 | TraesCS2B01G361800 | chr7D | 78.146 | 302 | 50 | 9 | 1580 | 1881 | 31965852 | 31965567 | 1.540000e-40 | 178.0 |
21 | TraesCS2B01G361800 | chr4A | 84.043 | 752 | 90 | 18 | 1936 | 2678 | 417625545 | 417626275 | 0.000000e+00 | 697.0 |
22 | TraesCS2B01G361800 | chr4A | 78.808 | 302 | 51 | 7 | 1580 | 1881 | 417625251 | 417625539 | 1.980000e-44 | 191.0 |
23 | TraesCS2B01G361800 | chr4A | 83.704 | 135 | 17 | 5 | 4688 | 4817 | 630758503 | 630758369 | 7.330000e-24 | 122.0 |
24 | TraesCS2B01G361800 | chr6B | 82.319 | 690 | 68 | 24 | 1994 | 2677 | 520243070 | 520243711 | 2.840000e-152 | 549.0 |
25 | TraesCS2B01G361800 | chr6B | 90.110 | 91 | 9 | 0 | 1936 | 2026 | 630698669 | 630698579 | 9.480000e-23 | 119.0 |
26 | TraesCS2B01G361800 | chr3D | 80.058 | 687 | 76 | 25 | 1994 | 2678 | 505790726 | 505790099 | 2.290000e-123 | 453.0 |
27 | TraesCS2B01G361800 | chr3D | 86.598 | 194 | 19 | 4 | 2221 | 2414 | 491795703 | 491795517 | 1.970000e-49 | 207.0 |
28 | TraesCS2B01G361800 | chr3D | 79.675 | 246 | 32 | 9 | 4462 | 4689 | 451880952 | 451880707 | 1.550000e-35 | 161.0 |
29 | TraesCS2B01G361800 | chr3D | 81.765 | 170 | 25 | 4 | 4520 | 4683 | 374056814 | 374056983 | 2.620000e-28 | 137.0 |
30 | TraesCS2B01G361800 | chr5B | 83.422 | 374 | 33 | 17 | 180 | 525 | 649446165 | 649446537 | 2.420000e-83 | 320.0 |
31 | TraesCS2B01G361800 | chr5B | 85.333 | 150 | 18 | 3 | 4682 | 4827 | 418548889 | 418549038 | 9.350000e-33 | 152.0 |
32 | TraesCS2B01G361800 | chr5B | 96.774 | 62 | 2 | 0 | 11 | 72 | 390710571 | 390710510 | 2.650000e-18 | 104.0 |
33 | TraesCS2B01G361800 | chr5B | 98.000 | 50 | 1 | 0 | 7 | 56 | 477498426 | 477498475 | 2.670000e-13 | 87.9 |
34 | TraesCS2B01G361800 | chr3A | 88.660 | 194 | 15 | 4 | 2221 | 2414 | 633293934 | 633293748 | 4.200000e-56 | 230.0 |
35 | TraesCS2B01G361800 | chr3A | 83.230 | 161 | 21 | 4 | 4446 | 4600 | 46208889 | 46208729 | 5.620000e-30 | 143.0 |
36 | TraesCS2B01G361800 | chr4B | 81.887 | 265 | 29 | 10 | 4443 | 4689 | 42938418 | 42938155 | 7.070000e-49 | 206.0 |
37 | TraesCS2B01G361800 | chr4B | 83.226 | 155 | 18 | 4 | 4443 | 4589 | 377733046 | 377733200 | 9.410000e-28 | 135.0 |
38 | TraesCS2B01G361800 | chr1A | 80.144 | 277 | 30 | 17 | 4438 | 4689 | 156671363 | 156671087 | 3.310000e-42 | 183.0 |
39 | TraesCS2B01G361800 | chr1A | 79.554 | 269 | 35 | 7 | 4441 | 4689 | 568268781 | 568268513 | 1.990000e-39 | 174.0 |
40 | TraesCS2B01G361800 | chr1A | 86.301 | 146 | 17 | 2 | 4687 | 4831 | 491646606 | 491646463 | 7.220000e-34 | 156.0 |
41 | TraesCS2B01G361800 | chr1A | 83.333 | 168 | 13 | 2 | 4682 | 4834 | 54362536 | 54362369 | 2.020000e-29 | 141.0 |
42 | TraesCS2B01G361800 | chr1A | 95.455 | 66 | 1 | 1 | 9 | 72 | 381297341 | 381297406 | 2.650000e-18 | 104.0 |
43 | TraesCS2B01G361800 | chr1A | 91.176 | 68 | 2 | 2 | 9 | 72 | 40230842 | 40230909 | 7.430000e-14 | 89.8 |
44 | TraesCS2B01G361800 | chr1D | 80.078 | 256 | 38 | 5 | 4442 | 4684 | 398570992 | 398571247 | 1.540000e-40 | 178.0 |
45 | TraesCS2B01G361800 | chr1D | 94.792 | 96 | 4 | 1 | 4741 | 4835 | 19153727 | 19153632 | 1.210000e-31 | 148.0 |
46 | TraesCS2B01G361800 | chr1D | 84.337 | 166 | 11 | 2 | 4682 | 4832 | 293904601 | 293904766 | 1.210000e-31 | 148.0 |
47 | TraesCS2B01G361800 | chr1D | 90.323 | 62 | 6 | 0 | 11 | 72 | 411783214 | 411783275 | 1.240000e-11 | 82.4 |
48 | TraesCS2B01G361800 | chr1D | 89.231 | 65 | 3 | 2 | 9 | 72 | 403375885 | 403375946 | 1.610000e-10 | 78.7 |
49 | TraesCS2B01G361800 | chr7A | 79.554 | 269 | 30 | 12 | 4441 | 4684 | 75572984 | 75573252 | 9.280000e-38 | 169.0 |
50 | TraesCS2B01G361800 | chr6D | 86.310 | 168 | 8 | 2 | 4680 | 4832 | 243032888 | 243033055 | 9.280000e-38 | 169.0 |
51 | TraesCS2B01G361800 | chr6D | 84.431 | 167 | 11 | 2 | 4680 | 4831 | 404605355 | 404605521 | 3.360000e-32 | 150.0 |
52 | TraesCS2B01G361800 | chr5A | 79.336 | 271 | 30 | 13 | 4440 | 4684 | 471410598 | 471410868 | 3.340000e-37 | 167.0 |
53 | TraesCS2B01G361800 | chr5A | 79.508 | 244 | 25 | 10 | 4442 | 4661 | 295588346 | 295588104 | 3.360000e-32 | 150.0 |
54 | TraesCS2B01G361800 | chr3B | 86.503 | 163 | 7 | 9 | 4688 | 4835 | 55460770 | 55460608 | 1.200000e-36 | 165.0 |
55 | TraesCS2B01G361800 | chr3B | 78.846 | 260 | 37 | 7 | 4441 | 4684 | 821289826 | 821290083 | 5.580000e-35 | 159.0 |
56 | TraesCS2B01G361800 | chr3B | 85.030 | 167 | 10 | 2 | 4680 | 4831 | 697907975 | 697908141 | 7.220000e-34 | 156.0 |
57 | TraesCS2B01G361800 | chr7B | 84.524 | 168 | 15 | 4 | 4441 | 4598 | 454795313 | 454795147 | 7.220000e-34 | 156.0 |
58 | TraesCS2B01G361800 | chr7B | 93.814 | 97 | 2 | 3 | 4742 | 4835 | 367021558 | 367021463 | 5.620000e-30 | 143.0 |
59 | TraesCS2B01G361800 | chr7B | 83.333 | 168 | 11 | 4 | 4680 | 4832 | 123805243 | 123805078 | 7.280000e-29 | 139.0 |
60 | TraesCS2B01G361800 | chrUn | 100.000 | 29 | 0 | 0 | 788 | 816 | 20368170 | 20368142 | 3.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G361800 | chr2B | 514861101 | 514866487 | 5386 | True | 9949.0 | 9949 | 100.00000 | 1 | 5387 | 1 | chr2B.!!$R2 | 5386 |
1 | TraesCS2B01G361800 | chr2D | 436368273 | 436373608 | 5335 | False | 3439.0 | 6229 | 94.75600 | 143 | 5387 | 2 | chr2D.!!$F3 | 5244 |
2 | TraesCS2B01G361800 | chr2A | 550538381 | 550543276 | 4895 | False | 1720.5 | 5206 | 93.20775 | 141 | 5387 | 4 | chr2A.!!$F2 | 5246 |
3 | TraesCS2B01G361800 | chr2A | 723565882 | 723566906 | 1024 | False | 443.5 | 691 | 81.52450 | 1580 | 2678 | 2 | chr2A.!!$F3 | 1098 |
4 | TraesCS2B01G361800 | chr7D | 31964830 | 31965852 | 1022 | True | 440.0 | 702 | 81.16100 | 1580 | 2678 | 2 | chr7D.!!$R1 | 1098 |
5 | TraesCS2B01G361800 | chr4A | 417625251 | 417626275 | 1024 | False | 444.0 | 697 | 81.42550 | 1580 | 2678 | 2 | chr4A.!!$F1 | 1098 |
6 | TraesCS2B01G361800 | chr6B | 520243070 | 520243711 | 641 | False | 549.0 | 549 | 82.31900 | 1994 | 2677 | 1 | chr6B.!!$F1 | 683 |
7 | TraesCS2B01G361800 | chr3D | 505790099 | 505790726 | 627 | True | 453.0 | 453 | 80.05800 | 1994 | 2678 | 1 | chr3D.!!$R3 | 684 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
831 | 847 | 0.253327 | GAAGGATTTCCCCGTGAGCT | 59.747 | 55.000 | 0.0 | 0.0 | 36.42 | 4.09 | F |
2056 | 2088 | 0.036164 | TGGGTGGGACTTTCATGTCG | 59.964 | 55.000 | 0.0 | 0.0 | 37.81 | 4.35 | F |
2529 | 2575 | 0.239347 | CCTTCCTTGCTGCTTGAACG | 59.761 | 55.000 | 0.0 | 0.0 | 0.00 | 3.95 | F |
2530 | 2576 | 0.386478 | CTTCCTTGCTGCTTGAACGC | 60.386 | 55.000 | 0.0 | 0.0 | 0.00 | 4.84 | F |
3346 | 3394 | 1.352352 | AGGTACTCAACAGCTTGCCAT | 59.648 | 47.619 | 0.0 | 0.0 | 0.00 | 4.40 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2509 | 2555 | 0.038801 | GTTCAAGCAGCAAGGAAGGC | 60.039 | 55.0 | 0.0 | 0.0 | 0.0 | 4.35 | R |
3255 | 3303 | 0.035317 | AATCACGCCTGACAAGCTCA | 59.965 | 50.0 | 0.0 | 0.0 | 0.0 | 4.26 | R |
4340 | 4460 | 2.035066 | GCATGGATTACACCATTCTGCC | 59.965 | 50.0 | 0.0 | 0.0 | 47.0 | 4.85 | R |
4364 | 4488 | 7.424227 | AACTAAATCGTCGTGTTTAATTGGA | 57.576 | 32.0 | 0.0 | 0.0 | 0.0 | 3.53 | R |
4821 | 4986 | 0.179073 | CAAGGGCATGTACTCCTCCG | 60.179 | 60.0 | 0.0 | 0.0 | 0.0 | 4.63 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
22 | 23 | 5.678955 | ATTTTGGTACTACTCCCTCTGTC | 57.321 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
23 | 24 | 2.822707 | TGGTACTACTCCCTCTGTCC | 57.177 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
24 | 25 | 1.287146 | TGGTACTACTCCCTCTGTCCC | 59.713 | 57.143 | 0.00 | 0.00 | 0.00 | 4.46 |
25 | 26 | 1.287146 | GGTACTACTCCCTCTGTCCCA | 59.713 | 57.143 | 0.00 | 0.00 | 0.00 | 4.37 |
26 | 27 | 2.091222 | GGTACTACTCCCTCTGTCCCAT | 60.091 | 54.545 | 0.00 | 0.00 | 0.00 | 4.00 |
27 | 28 | 3.139770 | GGTACTACTCCCTCTGTCCCATA | 59.860 | 52.174 | 0.00 | 0.00 | 0.00 | 2.74 |
28 | 29 | 4.387211 | GGTACTACTCCCTCTGTCCCATAA | 60.387 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
29 | 30 | 4.561254 | ACTACTCCCTCTGTCCCATAAT | 57.439 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
30 | 31 | 4.227197 | ACTACTCCCTCTGTCCCATAATG | 58.773 | 47.826 | 0.00 | 0.00 | 0.00 | 1.90 |
31 | 32 | 3.136641 | ACTCCCTCTGTCCCATAATGT | 57.863 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
32 | 33 | 4.280789 | ACTCCCTCTGTCCCATAATGTA | 57.719 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
33 | 34 | 4.631234 | ACTCCCTCTGTCCCATAATGTAA | 58.369 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
34 | 35 | 4.656112 | ACTCCCTCTGTCCCATAATGTAAG | 59.344 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
35 | 36 | 4.890988 | TCCCTCTGTCCCATAATGTAAGA | 58.109 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
36 | 37 | 5.285401 | TCCCTCTGTCCCATAATGTAAGAA | 58.715 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
37 | 38 | 5.366768 | TCCCTCTGTCCCATAATGTAAGAAG | 59.633 | 44.000 | 0.00 | 0.00 | 0.00 | 2.85 |
38 | 39 | 5.131142 | CCCTCTGTCCCATAATGTAAGAAGT | 59.869 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
39 | 40 | 6.353082 | CCCTCTGTCCCATAATGTAAGAAGTT | 60.353 | 42.308 | 0.00 | 0.00 | 0.00 | 2.66 |
40 | 41 | 7.112779 | CCTCTGTCCCATAATGTAAGAAGTTT | 58.887 | 38.462 | 0.00 | 0.00 | 0.00 | 2.66 |
41 | 42 | 7.611855 | CCTCTGTCCCATAATGTAAGAAGTTTT | 59.388 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
42 | 43 | 8.934023 | TCTGTCCCATAATGTAAGAAGTTTTT | 57.066 | 30.769 | 0.00 | 0.00 | 0.00 | 1.94 |
79 | 80 | 6.001449 | TGGGACAGAGGGAGTAATATTTTG | 57.999 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
80 | 81 | 4.822350 | GGGACAGAGGGAGTAATATTTTGC | 59.178 | 45.833 | 0.00 | 0.00 | 0.00 | 3.68 |
81 | 82 | 5.437060 | GGACAGAGGGAGTAATATTTTGCA | 58.563 | 41.667 | 0.00 | 0.00 | 0.00 | 4.08 |
82 | 83 | 5.885912 | GGACAGAGGGAGTAATATTTTGCAA | 59.114 | 40.000 | 0.00 | 0.00 | 0.00 | 4.08 |
83 | 84 | 6.038714 | GGACAGAGGGAGTAATATTTTGCAAG | 59.961 | 42.308 | 0.00 | 0.00 | 0.00 | 4.01 |
84 | 85 | 6.721318 | ACAGAGGGAGTAATATTTTGCAAGA | 58.279 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
85 | 86 | 6.599638 | ACAGAGGGAGTAATATTTTGCAAGAC | 59.400 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
86 | 87 | 6.599244 | CAGAGGGAGTAATATTTTGCAAGACA | 59.401 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
87 | 88 | 7.284034 | CAGAGGGAGTAATATTTTGCAAGACAT | 59.716 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
88 | 89 | 7.500559 | AGAGGGAGTAATATTTTGCAAGACATC | 59.499 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
89 | 90 | 6.547510 | AGGGAGTAATATTTTGCAAGACATCC | 59.452 | 38.462 | 0.00 | 1.12 | 0.00 | 3.51 |
90 | 91 | 6.321181 | GGGAGTAATATTTTGCAAGACATCCA | 59.679 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
91 | 92 | 7.147915 | GGGAGTAATATTTTGCAAGACATCCAA | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 3.53 |
92 | 93 | 8.250332 | GGAGTAATATTTTGCAAGACATCCAAA | 58.750 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
93 | 94 | 9.807649 | GAGTAATATTTTGCAAGACATCCAAAT | 57.192 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
113 | 114 | 8.560576 | CCAAATTTGGTAATATTAGAAGCGTG | 57.439 | 34.615 | 26.34 | 0.00 | 43.43 | 5.34 |
114 | 115 | 8.402472 | CCAAATTTGGTAATATTAGAAGCGTGA | 58.598 | 33.333 | 26.34 | 0.00 | 43.43 | 4.35 |
115 | 116 | 9.781834 | CAAATTTGGTAATATTAGAAGCGTGAA | 57.218 | 29.630 | 10.49 | 0.00 | 0.00 | 3.18 |
119 | 120 | 9.826574 | TTTGGTAATATTAGAAGCGTGAATACT | 57.173 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
129 | 130 | 7.862512 | AGAAGCGTGAATACTAGTTAGTACT | 57.137 | 36.000 | 0.00 | 0.00 | 41.18 | 2.73 |
130 | 131 | 7.918643 | AGAAGCGTGAATACTAGTTAGTACTC | 58.081 | 38.462 | 0.00 | 1.59 | 41.18 | 2.59 |
131 | 132 | 6.616774 | AGCGTGAATACTAGTTAGTACTCC | 57.383 | 41.667 | 0.00 | 0.00 | 41.18 | 3.85 |
132 | 133 | 6.118170 | AGCGTGAATACTAGTTAGTACTCCA | 58.882 | 40.000 | 0.00 | 1.18 | 41.18 | 3.86 |
133 | 134 | 6.038050 | AGCGTGAATACTAGTTAGTACTCCAC | 59.962 | 42.308 | 0.00 | 0.00 | 41.18 | 4.02 |
134 | 135 | 6.183360 | GCGTGAATACTAGTTAGTACTCCACA | 60.183 | 42.308 | 0.00 | 7.69 | 41.18 | 4.17 |
135 | 136 | 7.627088 | GCGTGAATACTAGTTAGTACTCCACAA | 60.627 | 40.741 | 0.00 | 0.00 | 41.18 | 3.33 |
136 | 137 | 8.404000 | CGTGAATACTAGTTAGTACTCCACAAT | 58.596 | 37.037 | 0.00 | 0.00 | 41.18 | 2.71 |
224 | 229 | 3.246226 | CACAATTACAGTATGGAGCTCGC | 59.754 | 47.826 | 7.83 | 1.18 | 43.62 | 5.03 |
257 | 262 | 5.299531 | GGGTTTCTCAGGGCTAAATTATCAC | 59.700 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
277 | 282 | 7.623999 | ATCACATAATCTATCTGGAGTGGTT | 57.376 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
305 | 310 | 2.686405 | TGTTAGATGTATCGACGGCAGT | 59.314 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
344 | 349 | 1.927895 | AGTAGCCTGAAATTCGAGCG | 58.072 | 50.000 | 2.16 | 0.00 | 0.00 | 5.03 |
360 | 366 | 2.762745 | GAGCGTGAAAAAGGGTAGACA | 58.237 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
371 | 377 | 1.144093 | AGGGTAGACAGGAGAGATCCG | 59.856 | 57.143 | 0.00 | 0.00 | 34.28 | 4.18 |
453 | 459 | 2.107750 | CGCGTCCATCTCCAGCAT | 59.892 | 61.111 | 0.00 | 0.00 | 0.00 | 3.79 |
579 | 585 | 3.471806 | GAGGAGGAGGCGGGGTTC | 61.472 | 72.222 | 0.00 | 0.00 | 0.00 | 3.62 |
712 | 718 | 1.681666 | CTGCTGCTTCCCTTCCTCA | 59.318 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
777 | 793 | 1.080298 | GCTTTGCTTCTGCCGCAAT | 60.080 | 52.632 | 0.00 | 0.00 | 45.67 | 3.56 |
783 | 799 | 1.134431 | TGCTTCTGCCGCAATAGATGA | 60.134 | 47.619 | 0.00 | 0.00 | 38.71 | 2.92 |
812 | 828 | 1.817881 | CAGAGCAGAGCAGAGGAGG | 59.182 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
821 | 837 | 2.771372 | AGAGCAGAGGAGGAAGGATTTC | 59.229 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
831 | 847 | 0.253327 | GAAGGATTTCCCCGTGAGCT | 59.747 | 55.000 | 0.00 | 0.00 | 36.42 | 4.09 |
832 | 848 | 0.253327 | AAGGATTTCCCCGTGAGCTC | 59.747 | 55.000 | 6.82 | 6.82 | 36.42 | 4.09 |
890 | 907 | 3.875134 | CTGGTTCCACGTGTATTAATCCC | 59.125 | 47.826 | 15.65 | 3.37 | 0.00 | 3.85 |
891 | 908 | 2.867975 | GGTTCCACGTGTATTAATCCCG | 59.132 | 50.000 | 15.65 | 0.00 | 0.00 | 5.14 |
892 | 909 | 2.228138 | TCCACGTGTATTAATCCCGC | 57.772 | 50.000 | 15.65 | 0.00 | 0.00 | 6.13 |
932 | 949 | 2.270205 | CTGTGCTGGGCGGAGAAT | 59.730 | 61.111 | 0.00 | 0.00 | 0.00 | 2.40 |
1000 | 1017 | 0.671781 | CAGCTCCAGTTTCGTCCCTG | 60.672 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
1620 | 1641 | 7.530010 | CAATTGAAACCTATGTGACTGTAAGG | 58.470 | 38.462 | 0.00 | 0.00 | 39.30 | 2.69 |
1657 | 1678 | 7.094377 | GCAAGGTCTCATTGGACTGTTAATTAA | 60.094 | 37.037 | 0.00 | 0.00 | 36.55 | 1.40 |
1659 | 1680 | 9.533831 | AAGGTCTCATTGGACTGTTAATTAATT | 57.466 | 29.630 | 5.89 | 5.89 | 36.55 | 1.40 |
1729 | 1752 | 7.927048 | TGATCTCTGCACATGAAAATCTAATG | 58.073 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
1747 | 1777 | 1.034838 | TGGCCACAGGTTGTGTTGAC | 61.035 | 55.000 | 0.00 | 0.00 | 46.45 | 3.18 |
1757 | 1788 | 2.484264 | GGTTGTGTTGACTGATGTAGCC | 59.516 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
1765 | 1796 | 3.797039 | TGACTGATGTAGCCATACAAGC | 58.203 | 45.455 | 0.00 | 0.00 | 44.85 | 4.01 |
1773 | 1804 | 7.154656 | TGATGTAGCCATACAAGCACTATTAG | 58.845 | 38.462 | 0.00 | 0.00 | 44.85 | 1.73 |
1780 | 1811 | 7.502226 | AGCCATACAAGCACTATTAGCATTTTA | 59.498 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
1856 | 1888 | 5.995446 | TGTAGGTACAATCCATATGTGCAA | 58.005 | 37.500 | 1.24 | 0.00 | 35.42 | 4.08 |
1927 | 1959 | 1.340114 | GGTTTGTCCCTAGCCCAAGAG | 60.340 | 57.143 | 0.00 | 0.00 | 0.00 | 2.85 |
1951 | 1983 | 8.503458 | AGACTATTTCATCTTGATTTGAGTGG | 57.497 | 34.615 | 0.00 | 0.00 | 0.00 | 4.00 |
1952 | 1984 | 7.066766 | AGACTATTTCATCTTGATTTGAGTGGC | 59.933 | 37.037 | 0.00 | 0.00 | 0.00 | 5.01 |
1968 | 2000 | 3.806380 | AGTGGCTTCATGCTCAATCTAG | 58.194 | 45.455 | 0.00 | 0.00 | 42.39 | 2.43 |
1983 | 2015 | 8.777413 | TGCTCAATCTAGTTATATTTGATGCAC | 58.223 | 33.333 | 0.00 | 0.00 | 31.69 | 4.57 |
2056 | 2088 | 0.036164 | TGGGTGGGACTTTCATGTCG | 59.964 | 55.000 | 0.00 | 0.00 | 37.81 | 4.35 |
2113 | 2152 | 2.972021 | TCTCCATGATGCTTTATCGGGA | 59.028 | 45.455 | 0.00 | 0.00 | 38.68 | 5.14 |
2416 | 2458 | 1.609208 | GTGACACAAACAGAGGCCAT | 58.391 | 50.000 | 5.01 | 0.00 | 0.00 | 4.40 |
2478 | 2523 | 7.539034 | AAGATGCTGGTTTTAAGGTTATTGT | 57.461 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
2490 | 2536 | 1.612199 | GGTTATTGTTCACCGCCCTCA | 60.612 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
2499 | 2545 | 1.032114 | CACCGCCCTCAAATTCCTCC | 61.032 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2509 | 2555 | 5.337009 | CCCTCAAATTCCTCCTGTTGAATTG | 60.337 | 44.000 | 0.00 | 0.00 | 39.59 | 2.32 |
2510 | 2556 | 5.138125 | TCAAATTCCTCCTGTTGAATTGC | 57.862 | 39.130 | 0.00 | 0.00 | 39.59 | 3.56 |
2519 | 2565 | 2.611224 | CCTGTTGAATTGCCTTCCTTGC | 60.611 | 50.000 | 0.00 | 0.00 | 32.49 | 4.01 |
2529 | 2575 | 0.239347 | CCTTCCTTGCTGCTTGAACG | 59.761 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2530 | 2576 | 0.386478 | CTTCCTTGCTGCTTGAACGC | 60.386 | 55.000 | 0.00 | 0.00 | 0.00 | 4.84 |
2581 | 2629 | 7.600752 | GTCTTCTTAGCTTGAGTTATGACTTGT | 59.399 | 37.037 | 0.00 | 0.00 | 35.88 | 3.16 |
2667 | 2715 | 4.559862 | ACCTAATGTTGGAGTTGAGAGG | 57.440 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
2849 | 2897 | 6.500684 | TTGATCTTATGGTCAGTCTTTTGC | 57.499 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
2851 | 2899 | 6.240894 | TGATCTTATGGTCAGTCTTTTGCTT | 58.759 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2852 | 2900 | 6.372659 | TGATCTTATGGTCAGTCTTTTGCTTC | 59.627 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
2857 | 2905 | 5.489792 | TGGTCAGTCTTTTGCTTCTCTAT | 57.510 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
2872 | 2920 | 8.582657 | TGCTTCTCTATAGTTTTAGAGTGAGT | 57.417 | 34.615 | 0.00 | 0.00 | 43.74 | 3.41 |
3085 | 3133 | 1.740025 | CTTTGGCTCGAATGGAAGACC | 59.260 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
3183 | 3231 | 8.694540 | ACTGCCATGTGCTTATAATTGATTAAA | 58.305 | 29.630 | 7.54 | 0.00 | 42.00 | 1.52 |
3276 | 3324 | 1.661112 | GAGCTTGTCAGGCGTGATTAC | 59.339 | 52.381 | 12.93 | 0.94 | 34.36 | 1.89 |
3291 | 3339 | 1.396996 | GATTACGCTGCAAATGACGGT | 59.603 | 47.619 | 0.00 | 0.00 | 0.00 | 4.83 |
3346 | 3394 | 1.352352 | AGGTACTCAACAGCTTGCCAT | 59.648 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
3355 | 3403 | 3.589951 | ACAGCTTGCCATCCTATTCAT | 57.410 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
3459 | 3514 | 6.833416 | TCAATTTCCTTTACATAGGTGGGATG | 59.167 | 38.462 | 0.00 | 0.00 | 36.63 | 3.51 |
3465 | 3520 | 6.435904 | TCCTTTACATAGGTGGGATGTTTTTG | 59.564 | 38.462 | 0.00 | 0.00 | 38.47 | 2.44 |
3473 | 3528 | 6.590234 | AGGTGGGATGTTTTTGAACTTATC | 57.410 | 37.500 | 0.00 | 0.00 | 0.00 | 1.75 |
3474 | 3529 | 5.480422 | AGGTGGGATGTTTTTGAACTTATCC | 59.520 | 40.000 | 0.00 | 0.00 | 34.69 | 2.59 |
3477 | 3535 | 5.835819 | TGGGATGTTTTTGAACTTATCCACA | 59.164 | 36.000 | 0.00 | 0.00 | 36.63 | 4.17 |
3491 | 3549 | 9.555727 | GAACTTATCCACATAGTTATTGCCTTA | 57.444 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
3504 | 3562 | 8.644374 | AGTTATTGCCTTATTGGTTTCACTTA | 57.356 | 30.769 | 0.00 | 0.00 | 38.35 | 2.24 |
3540 | 3598 | 8.725148 | AGTTTTAATCTCTGTTCTGCTTGTATG | 58.275 | 33.333 | 0.00 | 0.00 | 0.00 | 2.39 |
3545 | 3603 | 4.526650 | TCTCTGTTCTGCTTGTATGGTGTA | 59.473 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
3548 | 3606 | 4.968259 | TGTTCTGCTTGTATGGTGTACTT | 58.032 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
3583 | 3645 | 5.186198 | GTGCATAGAGTTTATCACTGGGTT | 58.814 | 41.667 | 0.00 | 0.00 | 35.01 | 4.11 |
3589 | 3651 | 9.099454 | CATAGAGTTTATCACTGGGTTTCTTAC | 57.901 | 37.037 | 0.00 | 0.00 | 35.01 | 2.34 |
3603 | 3665 | 6.650427 | GGTTTCTTACCCTTTTGATCTTGT | 57.350 | 37.500 | 0.00 | 0.00 | 41.43 | 3.16 |
3628 | 3690 | 8.276325 | GTGTAACATTACTCACACTTCTCTTTG | 58.724 | 37.037 | 3.58 | 0.00 | 38.56 | 2.77 |
3752 | 3814 | 1.920574 | CTTCATGTCTACGGAACAGCG | 59.079 | 52.381 | 0.00 | 0.00 | 0.00 | 5.18 |
3809 | 3871 | 5.705905 | GCAACACCAGGTTAATCTCTTACTT | 59.294 | 40.000 | 0.00 | 0.00 | 37.72 | 2.24 |
3821 | 3883 | 9.974750 | GTTAATCTCTTACTTGAACAACTATGC | 57.025 | 33.333 | 0.00 | 0.00 | 0.00 | 3.14 |
3841 | 3952 | 6.683974 | ATGCGTGCTCAGAATAGTAAAAAT | 57.316 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
3842 | 3953 | 6.494893 | TGCGTGCTCAGAATAGTAAAAATT | 57.505 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
3853 | 3966 | 9.238368 | CAGAATAGTAAAAATTAGGACCCACAA | 57.762 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
3894 | 4008 | 7.019774 | TGAATGAATACTTGCTAAGCATGAC | 57.980 | 36.000 | 0.00 | 0.00 | 38.76 | 3.06 |
3895 | 4009 | 6.598850 | TGAATGAATACTTGCTAAGCATGACA | 59.401 | 34.615 | 0.00 | 0.00 | 38.76 | 3.58 |
3896 | 4010 | 5.801350 | TGAATACTTGCTAAGCATGACAC | 57.199 | 39.130 | 0.00 | 0.00 | 38.76 | 3.67 |
3897 | 4011 | 5.491070 | TGAATACTTGCTAAGCATGACACT | 58.509 | 37.500 | 0.00 | 0.00 | 38.76 | 3.55 |
3899 | 4013 | 7.102993 | TGAATACTTGCTAAGCATGACACTAA | 58.897 | 34.615 | 0.00 | 0.00 | 38.76 | 2.24 |
3900 | 4014 | 7.278646 | TGAATACTTGCTAAGCATGACACTAAG | 59.721 | 37.037 | 0.00 | 0.00 | 38.76 | 2.18 |
3901 | 4015 | 4.256920 | ACTTGCTAAGCATGACACTAAGG | 58.743 | 43.478 | 0.00 | 0.00 | 38.76 | 2.69 |
3902 | 4016 | 2.632377 | TGCTAAGCATGACACTAAGGC | 58.368 | 47.619 | 0.00 | 0.00 | 31.71 | 4.35 |
3903 | 4017 | 2.237143 | TGCTAAGCATGACACTAAGGCT | 59.763 | 45.455 | 0.00 | 0.00 | 31.71 | 4.58 |
3909 | 4025 | 5.629079 | AGCATGACACTAAGGCTTTTTAC | 57.371 | 39.130 | 4.45 | 0.00 | 0.00 | 2.01 |
3976 | 4092 | 2.391616 | TTACCATGACTCTGCTGCTG | 57.608 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
4021 | 4137 | 6.773976 | TTTGTTCCATCCATCACCTATTTC | 57.226 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
4201 | 4317 | 6.321945 | TGGCATAGTGTATTTCAGCATCAAAT | 59.678 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
4206 | 4322 | 5.047164 | AGTGTATTTCAGCATCAAATGGCAA | 60.047 | 36.000 | 0.00 | 0.00 | 0.00 | 4.52 |
4340 | 4460 | 5.734855 | ATAGCAGCGTATTACACCTTTTG | 57.265 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
4364 | 4488 | 3.817084 | CAGAATGGTGTAATCCATGCGAT | 59.183 | 43.478 | 0.00 | 0.00 | 45.63 | 4.58 |
4367 | 4516 | 1.488393 | TGGTGTAATCCATGCGATCCA | 59.512 | 47.619 | 0.00 | 0.00 | 31.96 | 3.41 |
4369 | 4518 | 3.149196 | GGTGTAATCCATGCGATCCAAT | 58.851 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
4372 | 4521 | 5.240623 | GGTGTAATCCATGCGATCCAATTAA | 59.759 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4453 | 4602 | 2.702592 | TTTCCCTTAGGGCATGTACG | 57.297 | 50.000 | 13.54 | 0.00 | 43.94 | 3.67 |
4455 | 4604 | 1.227853 | CCCTTAGGGCATGTACGGC | 60.228 | 63.158 | 3.52 | 0.95 | 35.35 | 5.68 |
4470 | 4619 | 2.396590 | ACGGCGGTTGATAAGACAAT | 57.603 | 45.000 | 13.24 | 0.00 | 32.36 | 2.71 |
4472 | 4621 | 2.093658 | ACGGCGGTTGATAAGACAATCT | 60.094 | 45.455 | 13.24 | 0.00 | 32.36 | 2.40 |
4474 | 4623 | 4.116961 | CGGCGGTTGATAAGACAATCTTA | 58.883 | 43.478 | 0.00 | 0.95 | 42.49 | 2.10 |
4570 | 4729 | 5.757320 | CAGCTATTCCTAGAAACATGGTGAG | 59.243 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4578 | 4737 | 8.547481 | TCCTAGAAACATGGTGAGACATATTA | 57.453 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
4581 | 4740 | 7.502120 | AGAAACATGGTGAGACATATTATGC | 57.498 | 36.000 | 3.52 | 0.00 | 0.00 | 3.14 |
4585 | 4744 | 8.613060 | AACATGGTGAGACATATTATGCTAAG | 57.387 | 34.615 | 3.52 | 0.00 | 0.00 | 2.18 |
4645 | 4807 | 5.533112 | TGATTTCTCTCTCCTCCACCTTAT | 58.467 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
4653 | 4815 | 7.453126 | TCTCTCTCCTCCACCTTATCATTTATC | 59.547 | 40.741 | 0.00 | 0.00 | 0.00 | 1.75 |
4656 | 4818 | 6.270927 | TCTCCTCCACCTTATCATTTATCCTG | 59.729 | 42.308 | 0.00 | 0.00 | 0.00 | 3.86 |
4660 | 4822 | 6.005823 | TCCACCTTATCATTTATCCTGCATG | 58.994 | 40.000 | 0.00 | 0.00 | 0.00 | 4.06 |
4662 | 4824 | 6.662234 | CCACCTTATCATTTATCCTGCATGAT | 59.338 | 38.462 | 9.54 | 9.54 | 40.16 | 2.45 |
4666 | 4828 | 9.107177 | CCTTATCATTTATCCTGCATGATACTC | 57.893 | 37.037 | 10.81 | 0.00 | 38.86 | 2.59 |
4667 | 4829 | 9.107177 | CTTATCATTTATCCTGCATGATACTCC | 57.893 | 37.037 | 10.81 | 0.00 | 38.86 | 3.85 |
4677 | 4842 | 4.159557 | TGCATGATACTCCTATAGCACCA | 58.840 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
4684 | 4849 | 7.010771 | TGATACTCCTATAGCACCATTGTACT | 58.989 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
4685 | 4850 | 5.793030 | ACTCCTATAGCACCATTGTACTC | 57.207 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
4686 | 4851 | 4.589374 | ACTCCTATAGCACCATTGTACTCC | 59.411 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
4688 | 4853 | 3.904339 | CCTATAGCACCATTGTACTCCCT | 59.096 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
4691 | 4856 | 0.462047 | GCACCATTGTACTCCCTCCG | 60.462 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4692 | 4857 | 0.902531 | CACCATTGTACTCCCTCCGT | 59.097 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4694 | 4859 | 1.553704 | ACCATTGTACTCCCTCCGTTC | 59.446 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
4695 | 4860 | 1.134491 | CCATTGTACTCCCTCCGTTCC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 3.62 |
4696 | 4861 | 1.831736 | CATTGTACTCCCTCCGTTCCT | 59.168 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
4697 | 4862 | 2.905415 | TTGTACTCCCTCCGTTCCTA | 57.095 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
4698 | 4863 | 2.905415 | TGTACTCCCTCCGTTCCTAA | 57.095 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4699 | 4864 | 3.173953 | TGTACTCCCTCCGTTCCTAAA | 57.826 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
4700 | 4865 | 3.716431 | TGTACTCCCTCCGTTCCTAAAT | 58.284 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
4701 | 4866 | 4.870636 | TGTACTCCCTCCGTTCCTAAATA | 58.129 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
4702 | 4867 | 5.461327 | TGTACTCCCTCCGTTCCTAAATAT | 58.539 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
4703 | 4868 | 6.613699 | TGTACTCCCTCCGTTCCTAAATATA | 58.386 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
4704 | 4869 | 6.718454 | TGTACTCCCTCCGTTCCTAAATATAG | 59.282 | 42.308 | 0.00 | 0.00 | 0.00 | 1.31 |
4728 | 4893 | 8.753497 | AGGTCTTTTTAGAGATTTCAACAAGT | 57.247 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
4729 | 4894 | 8.624776 | AGGTCTTTTTAGAGATTTCAACAAGTG | 58.375 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
4730 | 4895 | 8.621286 | GGTCTTTTTAGAGATTTCAACAAGTGA | 58.379 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
4739 | 4904 | 8.873830 | AGAGATTTCAACAAGTGATTACATACG | 58.126 | 33.333 | 0.00 | 0.00 | 35.70 | 3.06 |
4740 | 4905 | 7.974675 | AGATTTCAACAAGTGATTACATACGG | 58.025 | 34.615 | 0.00 | 0.00 | 35.70 | 4.02 |
4741 | 4906 | 7.822334 | AGATTTCAACAAGTGATTACATACGGA | 59.178 | 33.333 | 0.00 | 0.00 | 35.70 | 4.69 |
4742 | 4907 | 7.915293 | TTTCAACAAGTGATTACATACGGAT | 57.085 | 32.000 | 0.00 | 0.00 | 35.70 | 4.18 |
4743 | 4908 | 7.534085 | TTCAACAAGTGATTACATACGGATC | 57.466 | 36.000 | 0.00 | 0.00 | 35.70 | 3.36 |
4744 | 4909 | 6.873997 | TCAACAAGTGATTACATACGGATCT | 58.126 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
4745 | 4910 | 8.002984 | TCAACAAGTGATTACATACGGATCTA | 57.997 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
4746 | 4911 | 7.919091 | TCAACAAGTGATTACATACGGATCTAC | 59.081 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
4747 | 4912 | 7.342769 | ACAAGTGATTACATACGGATCTACA | 57.657 | 36.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4748 | 4913 | 7.201145 | ACAAGTGATTACATACGGATCTACAC | 58.799 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
4749 | 4914 | 7.068348 | ACAAGTGATTACATACGGATCTACACT | 59.932 | 37.037 | 0.00 | 0.00 | 36.63 | 3.55 |
4750 | 4915 | 7.204496 | AGTGATTACATACGGATCTACACTC | 57.796 | 40.000 | 0.00 | 0.00 | 30.77 | 3.51 |
4751 | 4916 | 6.999272 | AGTGATTACATACGGATCTACACTCT | 59.001 | 38.462 | 0.00 | 0.00 | 30.77 | 3.24 |
4752 | 4917 | 8.155510 | AGTGATTACATACGGATCTACACTCTA | 58.844 | 37.037 | 0.00 | 0.00 | 30.77 | 2.43 |
4753 | 4918 | 8.781196 | GTGATTACATACGGATCTACACTCTAA | 58.219 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
4754 | 4919 | 9.346005 | TGATTACATACGGATCTACACTCTAAA | 57.654 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
4828 | 4993 | 9.780186 | AAAGAATTATATTTAGGAACGGAGGAG | 57.220 | 33.333 | 0.00 | 0.00 | 0.00 | 3.69 |
4829 | 4994 | 8.493787 | AGAATTATATTTAGGAACGGAGGAGT | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
4830 | 4995 | 9.597681 | AGAATTATATTTAGGAACGGAGGAGTA | 57.402 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
4831 | 4996 | 9.636879 | GAATTATATTTAGGAACGGAGGAGTAC | 57.363 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
4832 | 4997 | 8.716674 | ATTATATTTAGGAACGGAGGAGTACA | 57.283 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
4833 | 4998 | 8.716674 | TTATATTTAGGAACGGAGGAGTACAT | 57.283 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
4834 | 4999 | 4.730949 | TTTAGGAACGGAGGAGTACATG | 57.269 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
4835 | 5000 | 0.824759 | AGGAACGGAGGAGTACATGC | 59.175 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
4836 | 5001 | 0.179081 | GGAACGGAGGAGTACATGCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4837 | 5002 | 0.179081 | GAACGGAGGAGTACATGCCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
4838 | 5003 | 0.617820 | AACGGAGGAGTACATGCCCT | 60.618 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4839 | 5004 | 0.617820 | ACGGAGGAGTACATGCCCTT | 60.618 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
4840 | 5005 | 0.179073 | CGGAGGAGTACATGCCCTTG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.61 |
4849 | 5014 | 4.445710 | ATGCCCTTGCCCGCATGA | 62.446 | 61.111 | 0.00 | 0.00 | 43.91 | 3.07 |
4893 | 5058 | 6.353323 | TGTCCAGTTTGTTGAGAAGTTATCA | 58.647 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
4915 | 5081 | 7.904558 | TCAGAGTAATGAATGATCACTAGGT | 57.095 | 36.000 | 0.00 | 0.00 | 38.69 | 3.08 |
4916 | 5082 | 7.720442 | TCAGAGTAATGAATGATCACTAGGTG | 58.280 | 38.462 | 0.00 | 0.00 | 38.69 | 4.00 |
4917 | 5083 | 6.423302 | CAGAGTAATGAATGATCACTAGGTGC | 59.577 | 42.308 | 0.00 | 0.00 | 38.69 | 5.01 |
4920 | 5086 | 7.112122 | AGTAATGAATGATCACTAGGTGCAAA | 58.888 | 34.615 | 0.00 | 0.00 | 38.69 | 3.68 |
4921 | 5087 | 6.446781 | AATGAATGATCACTAGGTGCAAAG | 57.553 | 37.500 | 0.00 | 0.00 | 38.69 | 2.77 |
4922 | 5088 | 5.164620 | TGAATGATCACTAGGTGCAAAGA | 57.835 | 39.130 | 0.00 | 0.00 | 32.98 | 2.52 |
4924 | 5090 | 6.182627 | TGAATGATCACTAGGTGCAAAGATT | 58.817 | 36.000 | 0.00 | 0.00 | 32.98 | 2.40 |
4925 | 5091 | 7.337938 | TGAATGATCACTAGGTGCAAAGATTA | 58.662 | 34.615 | 0.00 | 0.00 | 32.98 | 1.75 |
4926 | 5092 | 7.994911 | TGAATGATCACTAGGTGCAAAGATTAT | 59.005 | 33.333 | 0.00 | 0.00 | 32.98 | 1.28 |
4935 | 5101 | 8.107095 | ACTAGGTGCAAAGATTATTTACAGGAA | 58.893 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
4955 | 5121 | 0.178984 | TAGTCCCACGTCACACTCCA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4958 | 5124 | 1.480954 | GTCCCACGTCACACTCCATAT | 59.519 | 52.381 | 0.00 | 0.00 | 0.00 | 1.78 |
4960 | 5126 | 1.757118 | CCCACGTCACACTCCATATCT | 59.243 | 52.381 | 0.00 | 0.00 | 0.00 | 1.98 |
4966 | 5132 | 4.342378 | ACGTCACACTCCATATCTGCTATT | 59.658 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
4985 | 5151 | 6.755141 | TGCTATTTTTATCGGACAGTGAGTAC | 59.245 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
1 | 2 | 3.836562 | GGACAGAGGGAGTAGTACCAAAA | 59.163 | 47.826 | 0.40 | 0.00 | 0.00 | 2.44 |
3 | 4 | 2.292061 | GGGACAGAGGGAGTAGTACCAA | 60.292 | 54.545 | 0.40 | 0.00 | 35.00 | 3.67 |
4 | 5 | 1.287146 | GGGACAGAGGGAGTAGTACCA | 59.713 | 57.143 | 0.40 | 0.00 | 35.00 | 3.25 |
5 | 6 | 1.287146 | TGGGACAGAGGGAGTAGTACC | 59.713 | 57.143 | 0.00 | 0.00 | 35.47 | 3.34 |
6 | 7 | 2.822707 | TGGGACAGAGGGAGTAGTAC | 57.177 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
39 | 40 | 7.227873 | TCTGTCCCATAATGTAGTGTCAAAAA | 58.772 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
40 | 41 | 6.774673 | TCTGTCCCATAATGTAGTGTCAAAA | 58.225 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
41 | 42 | 6.367374 | TCTGTCCCATAATGTAGTGTCAAA | 57.633 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
42 | 43 | 5.104941 | CCTCTGTCCCATAATGTAGTGTCAA | 60.105 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
43 | 44 | 4.405680 | CCTCTGTCCCATAATGTAGTGTCA | 59.594 | 45.833 | 0.00 | 0.00 | 0.00 | 3.58 |
44 | 45 | 4.202264 | CCCTCTGTCCCATAATGTAGTGTC | 60.202 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
45 | 46 | 3.711704 | CCCTCTGTCCCATAATGTAGTGT | 59.288 | 47.826 | 0.00 | 0.00 | 0.00 | 3.55 |
46 | 47 | 3.967326 | TCCCTCTGTCCCATAATGTAGTG | 59.033 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
47 | 48 | 4.227197 | CTCCCTCTGTCCCATAATGTAGT | 58.773 | 47.826 | 0.00 | 0.00 | 0.00 | 2.73 |
48 | 49 | 4.227197 | ACTCCCTCTGTCCCATAATGTAG | 58.773 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
49 | 50 | 4.280789 | ACTCCCTCTGTCCCATAATGTA | 57.719 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
50 | 51 | 3.136641 | ACTCCCTCTGTCCCATAATGT | 57.863 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
51 | 52 | 5.832539 | ATTACTCCCTCTGTCCCATAATG | 57.167 | 43.478 | 0.00 | 0.00 | 0.00 | 1.90 |
52 | 53 | 8.525729 | AAATATTACTCCCTCTGTCCCATAAT | 57.474 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
53 | 54 | 7.947782 | AAATATTACTCCCTCTGTCCCATAA | 57.052 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
54 | 55 | 7.691791 | GCAAAATATTACTCCCTCTGTCCCATA | 60.692 | 40.741 | 0.00 | 0.00 | 0.00 | 2.74 |
55 | 56 | 6.605119 | CAAAATATTACTCCCTCTGTCCCAT | 58.395 | 40.000 | 0.00 | 0.00 | 0.00 | 4.00 |
56 | 57 | 5.631481 | GCAAAATATTACTCCCTCTGTCCCA | 60.631 | 44.000 | 0.00 | 0.00 | 0.00 | 4.37 |
57 | 58 | 4.822350 | GCAAAATATTACTCCCTCTGTCCC | 59.178 | 45.833 | 0.00 | 0.00 | 0.00 | 4.46 |
58 | 59 | 5.437060 | TGCAAAATATTACTCCCTCTGTCC | 58.563 | 41.667 | 0.00 | 0.00 | 0.00 | 4.02 |
59 | 60 | 6.823689 | TCTTGCAAAATATTACTCCCTCTGTC | 59.176 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
60 | 61 | 6.599638 | GTCTTGCAAAATATTACTCCCTCTGT | 59.400 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
61 | 62 | 6.599244 | TGTCTTGCAAAATATTACTCCCTCTG | 59.401 | 38.462 | 0.00 | 0.00 | 0.00 | 3.35 |
62 | 63 | 6.721318 | TGTCTTGCAAAATATTACTCCCTCT | 58.279 | 36.000 | 0.00 | 0.00 | 0.00 | 3.69 |
63 | 64 | 7.255277 | GGATGTCTTGCAAAATATTACTCCCTC | 60.255 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
64 | 65 | 6.547510 | GGATGTCTTGCAAAATATTACTCCCT | 59.452 | 38.462 | 0.00 | 0.00 | 0.00 | 4.20 |
65 | 66 | 6.321181 | TGGATGTCTTGCAAAATATTACTCCC | 59.679 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
66 | 67 | 7.333528 | TGGATGTCTTGCAAAATATTACTCC | 57.666 | 36.000 | 0.00 | 0.13 | 0.00 | 3.85 |
67 | 68 | 9.807649 | ATTTGGATGTCTTGCAAAATATTACTC | 57.192 | 29.630 | 9.03 | 0.00 | 46.84 | 2.59 |
89 | 90 | 9.781834 | TTCACGCTTCTAATATTACCAAATTTG | 57.218 | 29.630 | 11.40 | 11.40 | 0.00 | 2.32 |
93 | 94 | 9.826574 | AGTATTCACGCTTCTAATATTACCAAA | 57.173 | 29.630 | 0.00 | 0.00 | 0.00 | 3.28 |
103 | 104 | 9.388506 | AGTACTAACTAGTATTCACGCTTCTAA | 57.611 | 33.333 | 0.00 | 0.00 | 40.55 | 2.10 |
104 | 105 | 8.954950 | AGTACTAACTAGTATTCACGCTTCTA | 57.045 | 34.615 | 0.00 | 0.00 | 40.55 | 2.10 |
105 | 106 | 7.012232 | GGAGTACTAACTAGTATTCACGCTTCT | 59.988 | 40.741 | 16.64 | 1.51 | 43.33 | 2.85 |
106 | 107 | 7.131565 | GGAGTACTAACTAGTATTCACGCTTC | 58.868 | 42.308 | 16.64 | 0.00 | 43.33 | 3.86 |
107 | 108 | 6.600822 | TGGAGTACTAACTAGTATTCACGCTT | 59.399 | 38.462 | 16.64 | 0.00 | 43.33 | 4.68 |
108 | 109 | 6.038050 | GTGGAGTACTAACTAGTATTCACGCT | 59.962 | 42.308 | 16.64 | 3.17 | 43.33 | 5.07 |
109 | 110 | 6.183360 | TGTGGAGTACTAACTAGTATTCACGC | 60.183 | 42.308 | 16.64 | 13.39 | 43.33 | 5.34 |
110 | 111 | 7.312657 | TGTGGAGTACTAACTAGTATTCACG | 57.687 | 40.000 | 16.64 | 0.00 | 43.33 | 4.35 |
116 | 117 | 9.745018 | ACTGTAATTGTGGAGTACTAACTAGTA | 57.255 | 33.333 | 0.00 | 0.00 | 35.56 | 1.82 |
117 | 118 | 8.647256 | ACTGTAATTGTGGAGTACTAACTAGT | 57.353 | 34.615 | 0.00 | 0.00 | 35.56 | 2.57 |
118 | 119 | 8.958506 | AGACTGTAATTGTGGAGTACTAACTAG | 58.041 | 37.037 | 0.00 | 0.00 | 35.56 | 2.57 |
119 | 120 | 8.874744 | AGACTGTAATTGTGGAGTACTAACTA | 57.125 | 34.615 | 0.00 | 0.00 | 35.56 | 2.24 |
120 | 121 | 7.778185 | AGACTGTAATTGTGGAGTACTAACT | 57.222 | 36.000 | 0.00 | 0.00 | 39.21 | 2.24 |
121 | 122 | 8.738106 | ACTAGACTGTAATTGTGGAGTACTAAC | 58.262 | 37.037 | 0.00 | 0.00 | 30.37 | 2.34 |
122 | 123 | 8.874744 | ACTAGACTGTAATTGTGGAGTACTAA | 57.125 | 34.615 | 0.00 | 0.00 | 30.37 | 2.24 |
123 | 124 | 8.874744 | AACTAGACTGTAATTGTGGAGTACTA | 57.125 | 34.615 | 0.00 | 0.00 | 30.37 | 1.82 |
124 | 125 | 7.778185 | AACTAGACTGTAATTGTGGAGTACT | 57.222 | 36.000 | 0.00 | 0.00 | 30.37 | 2.73 |
162 | 163 | 5.184864 | TCTTGATGACACACCTGTTGTTTTT | 59.815 | 36.000 | 0.00 | 0.00 | 35.67 | 1.94 |
166 | 167 | 3.558931 | TCTTGATGACACACCTGTTGT | 57.441 | 42.857 | 0.00 | 0.00 | 39.97 | 3.32 |
167 | 168 | 3.627123 | TGTTCTTGATGACACACCTGTTG | 59.373 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
169 | 170 | 3.558931 | TGTTCTTGATGACACACCTGT | 57.441 | 42.857 | 0.00 | 0.00 | 0.00 | 4.00 |
170 | 171 | 4.898829 | TTTGTTCTTGATGACACACCTG | 57.101 | 40.909 | 0.00 | 0.00 | 0.00 | 4.00 |
171 | 172 | 5.132502 | TCATTTGTTCTTGATGACACACCT | 58.867 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
173 | 174 | 6.728200 | TCTTCATTTGTTCTTGATGACACAC | 58.272 | 36.000 | 0.00 | 0.00 | 30.10 | 3.82 |
174 | 175 | 6.940831 | TCTTCATTTGTTCTTGATGACACA | 57.059 | 33.333 | 0.00 | 0.00 | 30.10 | 3.72 |
175 | 176 | 8.807667 | AATTCTTCATTTGTTCTTGATGACAC | 57.192 | 30.769 | 0.00 | 0.00 | 30.10 | 3.67 |
176 | 177 | 8.084073 | GGAATTCTTCATTTGTTCTTGATGACA | 58.916 | 33.333 | 5.23 | 0.00 | 30.10 | 3.58 |
177 | 178 | 8.084073 | TGGAATTCTTCATTTGTTCTTGATGAC | 58.916 | 33.333 | 5.23 | 0.00 | 30.10 | 3.06 |
178 | 179 | 8.084073 | GTGGAATTCTTCATTTGTTCTTGATGA | 58.916 | 33.333 | 5.23 | 0.00 | 0.00 | 2.92 |
214 | 215 | 2.816958 | CAGCGTTGCGAGCTCCAT | 60.817 | 61.111 | 8.47 | 0.00 | 44.06 | 3.41 |
224 | 229 | 2.175184 | CTGAGAAACCCGCAGCGTTG | 62.175 | 60.000 | 15.05 | 7.06 | 35.96 | 4.10 |
232 | 237 | 2.420058 | ATTTAGCCCTGAGAAACCCG | 57.580 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
277 | 282 | 7.080099 | GCCGTCGATACATCTAACATAGTTTA | 58.920 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
305 | 310 | 8.262933 | GGCTACTTTCTAGGGTTTCAAATACTA | 58.737 | 37.037 | 0.00 | 0.00 | 0.00 | 1.82 |
344 | 349 | 4.283722 | TCTCTCCTGTCTACCCTTTTTCAC | 59.716 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
360 | 366 | 1.064017 | AGAAGTGAGCGGATCTCTCCT | 60.064 | 52.381 | 11.25 | 0.00 | 42.38 | 3.69 |
371 | 377 | 1.980156 | GAAGTTCGACGAGAAGTGAGC | 59.020 | 52.381 | 0.00 | 0.00 | 41.41 | 4.26 |
497 | 503 | 2.415168 | TCGATCCGATGTGCTTGTTTTC | 59.585 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
547 | 553 | 0.741326 | TCCTCGAATCTGCTTCCTCG | 59.259 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
579 | 585 | 0.171903 | AGTGAAATCCGACGGTACCG | 59.828 | 55.000 | 32.22 | 32.22 | 46.03 | 4.02 |
586 | 592 | 2.785258 | GCCGCAGTGAAATCCGAC | 59.215 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
777 | 793 | 2.108075 | CTCTGCTCTCTCCCCTCATCTA | 59.892 | 54.545 | 0.00 | 0.00 | 0.00 | 1.98 |
783 | 799 | 1.381599 | CTGCTCTGCTCTCTCCCCT | 60.382 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
812 | 828 | 0.253327 | AGCTCACGGGGAAATCCTTC | 59.747 | 55.000 | 0.00 | 0.00 | 35.95 | 3.46 |
821 | 837 | 1.826385 | AAATTCTTGAGCTCACGGGG | 58.174 | 50.000 | 18.03 | 7.35 | 0.00 | 5.73 |
892 | 909 | 4.189188 | AGATCGCGAACGGACGGG | 62.189 | 66.667 | 15.24 | 12.54 | 45.12 | 5.28 |
1016 | 1033 | 0.250770 | GGAAGGGTTTCAGCGAAGGT | 60.251 | 55.000 | 0.00 | 0.00 | 41.48 | 3.50 |
1024 | 1041 | 1.001393 | GCCATCGGGAAGGGTTTCA | 60.001 | 57.895 | 0.00 | 0.00 | 34.90 | 2.69 |
1620 | 1641 | 4.115199 | ACCTTGCCCCTCATCCGC | 62.115 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
1624 | 1645 | 1.064166 | CAATGAGACCTTGCCCCTCAT | 60.064 | 52.381 | 0.00 | 0.00 | 46.23 | 2.90 |
1657 | 1678 | 9.167311 | CTAGAGAACCTTGTTTGCACTAATAAT | 57.833 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
1659 | 1680 | 7.676947 | ACTAGAGAACCTTGTTTGCACTAATA | 58.323 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
1660 | 1681 | 6.534634 | ACTAGAGAACCTTGTTTGCACTAAT | 58.465 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
1661 | 1682 | 5.925509 | ACTAGAGAACCTTGTTTGCACTAA | 58.074 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
1662 | 1683 | 5.546621 | ACTAGAGAACCTTGTTTGCACTA | 57.453 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
1663 | 1684 | 4.423625 | ACTAGAGAACCTTGTTTGCACT | 57.576 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
1664 | 1685 | 4.335594 | ACAACTAGAGAACCTTGTTTGCAC | 59.664 | 41.667 | 0.00 | 0.00 | 38.47 | 4.57 |
1665 | 1686 | 4.523083 | ACAACTAGAGAACCTTGTTTGCA | 58.477 | 39.130 | 0.00 | 0.00 | 38.47 | 4.08 |
1666 | 1687 | 5.065988 | TGAACAACTAGAGAACCTTGTTTGC | 59.934 | 40.000 | 0.00 | 0.00 | 38.47 | 3.68 |
1667 | 1688 | 6.316390 | AGTGAACAACTAGAGAACCTTGTTTG | 59.684 | 38.462 | 0.00 | 0.00 | 38.47 | 2.93 |
1668 | 1689 | 6.415573 | AGTGAACAACTAGAGAACCTTGTTT | 58.584 | 36.000 | 0.00 | 0.00 | 38.47 | 2.83 |
1669 | 1690 | 5.990668 | AGTGAACAACTAGAGAACCTTGTT | 58.009 | 37.500 | 6.60 | 6.60 | 40.56 | 2.83 |
1747 | 1777 | 3.801698 | AGTGCTTGTATGGCTACATCAG | 58.198 | 45.455 | 0.00 | 0.00 | 37.68 | 2.90 |
1773 | 1804 | 7.917505 | AGCATATCTACAAAGCAGTTAAAATGC | 59.082 | 33.333 | 5.91 | 5.91 | 44.18 | 3.56 |
1856 | 1888 | 2.633967 | CTGATCTATCCTGCTTCTGGCT | 59.366 | 50.000 | 0.00 | 0.00 | 42.39 | 4.75 |
1927 | 1959 | 7.066766 | AGCCACTCAAATCAAGATGAAATAGTC | 59.933 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
1951 | 1983 | 9.823098 | CAAATATAACTAGATTGAGCATGAAGC | 57.177 | 33.333 | 0.00 | 0.00 | 46.19 | 3.86 |
2056 | 2088 | 3.088194 | TCACGATAATCAGCCGGTAAC | 57.912 | 47.619 | 1.90 | 0.00 | 0.00 | 2.50 |
2113 | 2152 | 6.299805 | TCCTCAACATTAGCAGAAGTATGT | 57.700 | 37.500 | 0.00 | 0.00 | 32.89 | 2.29 |
2478 | 2523 | 0.404040 | AGGAATTTGAGGGCGGTGAA | 59.596 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2490 | 2536 | 4.162651 | AGGCAATTCAACAGGAGGAATTT | 58.837 | 39.130 | 0.00 | 0.00 | 40.68 | 1.82 |
2499 | 2545 | 2.298163 | AGCAAGGAAGGCAATTCAACAG | 59.702 | 45.455 | 3.64 | 0.00 | 39.91 | 3.16 |
2509 | 2555 | 0.038801 | GTTCAAGCAGCAAGGAAGGC | 60.039 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2510 | 2556 | 0.239347 | CGTTCAAGCAGCAAGGAAGG | 59.761 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2519 | 2565 | 1.432514 | TGAAGCTAGCGTTCAAGCAG | 58.567 | 50.000 | 20.34 | 0.00 | 41.32 | 4.24 |
2553 | 2600 | 7.846066 | AGTCATAACTCAAGCTAAGAAGACAT | 58.154 | 34.615 | 3.19 | 0.00 | 0.00 | 3.06 |
2581 | 2629 | 5.988287 | TCATCATGTATTAGGACAACTGCA | 58.012 | 37.500 | 0.00 | 0.00 | 31.83 | 4.41 |
2837 | 2885 | 8.541133 | AAACTATAGAGAAGCAAAAGACTGAC | 57.459 | 34.615 | 6.78 | 0.00 | 0.00 | 3.51 |
3085 | 3133 | 1.830279 | TCTCTGCATTTCAAGCCCAG | 58.170 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3183 | 3231 | 7.120285 | CACAACAAGAATAATGAGGACACATCT | 59.880 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
3189 | 3237 | 5.886960 | AGCACAACAAGAATAATGAGGAC | 57.113 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
3255 | 3303 | 0.035317 | AATCACGCCTGACAAGCTCA | 59.965 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3276 | 3324 | 1.442520 | CCAACCGTCATTTGCAGCG | 60.443 | 57.895 | 0.00 | 0.00 | 0.00 | 5.18 |
3279 | 3327 | 0.109532 | TCTCCCAACCGTCATTTGCA | 59.890 | 50.000 | 0.00 | 0.00 | 0.00 | 4.08 |
3346 | 3394 | 3.523157 | TCCCAGCAGTGAAATGAATAGGA | 59.477 | 43.478 | 0.00 | 0.00 | 0.00 | 2.94 |
3355 | 3403 | 2.655090 | TTCACATCCCAGCAGTGAAA | 57.345 | 45.000 | 4.90 | 0.00 | 45.95 | 2.69 |
3450 | 3505 | 5.480422 | GGATAAGTTCAAAAACATCCCACCT | 59.520 | 40.000 | 0.00 | 0.00 | 37.88 | 4.00 |
3465 | 3520 | 8.451908 | AAGGCAATAACTATGTGGATAAGTTC | 57.548 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
3473 | 3528 | 6.959639 | ACCAATAAGGCAATAACTATGTGG | 57.040 | 37.500 | 0.00 | 0.00 | 43.14 | 4.17 |
3474 | 3529 | 8.465999 | TGAAACCAATAAGGCAATAACTATGTG | 58.534 | 33.333 | 0.00 | 0.00 | 43.14 | 3.21 |
3477 | 3535 | 8.823220 | AGTGAAACCAATAAGGCAATAACTAT | 57.177 | 30.769 | 0.00 | 0.00 | 43.14 | 2.12 |
3521 | 3579 | 4.019860 | ACACCATACAAGCAGAACAGAGAT | 60.020 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
3522 | 3580 | 3.324846 | ACACCATACAAGCAGAACAGAGA | 59.675 | 43.478 | 0.00 | 0.00 | 0.00 | 3.10 |
3540 | 3598 | 3.684788 | CACCAGTAGCAATCAAGTACACC | 59.315 | 47.826 | 0.00 | 0.00 | 0.00 | 4.16 |
3545 | 3603 | 2.566833 | TGCACCAGTAGCAATCAAGT | 57.433 | 45.000 | 0.00 | 0.00 | 39.39 | 3.16 |
3548 | 3606 | 3.452264 | ACTCTATGCACCAGTAGCAATCA | 59.548 | 43.478 | 0.00 | 0.00 | 46.27 | 2.57 |
3583 | 3645 | 7.776030 | TGTTACACAAGATCAAAAGGGTAAGAA | 59.224 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
3589 | 3651 | 8.110860 | AGTAATGTTACACAAGATCAAAAGGG | 57.889 | 34.615 | 5.77 | 0.00 | 36.12 | 3.95 |
3603 | 3665 | 7.042051 | GCAAAGAGAAGTGTGAGTAATGTTACA | 60.042 | 37.037 | 5.77 | 0.00 | 36.12 | 2.41 |
3622 | 3684 | 9.213799 | GGATATCCTGTAGAATTTAGCAAAGAG | 57.786 | 37.037 | 14.97 | 0.00 | 0.00 | 2.85 |
3623 | 3685 | 8.938883 | AGGATATCCTGTAGAATTTAGCAAAGA | 58.061 | 33.333 | 23.95 | 0.00 | 46.55 | 2.52 |
3752 | 3814 | 2.436646 | CGACCATGCACAGGGACC | 60.437 | 66.667 | 8.56 | 0.00 | 35.92 | 4.46 |
3809 | 3871 | 2.068519 | CTGAGCACGCATAGTTGTTCA | 58.931 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
3821 | 3883 | 8.328864 | GTCCTAATTTTTACTATTCTGAGCACG | 58.671 | 37.037 | 0.00 | 0.00 | 0.00 | 5.34 |
3853 | 3966 | 4.099419 | TCATTCAGTCACTGTACACACACT | 59.901 | 41.667 | 4.28 | 0.00 | 32.61 | 3.55 |
3860 | 3974 | 6.591834 | AGCAAGTATTCATTCAGTCACTGTAC | 59.408 | 38.462 | 4.28 | 0.00 | 32.61 | 2.90 |
3894 | 4008 | 4.522789 | ACACCATGGTAAAAAGCCTTAGTG | 59.477 | 41.667 | 19.28 | 2.10 | 0.00 | 2.74 |
3895 | 4009 | 4.736473 | ACACCATGGTAAAAAGCCTTAGT | 58.264 | 39.130 | 19.28 | 3.45 | 0.00 | 2.24 |
3896 | 4010 | 6.827586 | TTACACCATGGTAAAAAGCCTTAG | 57.172 | 37.500 | 19.28 | 2.73 | 30.68 | 2.18 |
3897 | 4011 | 7.233757 | ACAATTACACCATGGTAAAAAGCCTTA | 59.766 | 33.333 | 19.28 | 0.00 | 36.86 | 2.69 |
3899 | 4013 | 5.542251 | ACAATTACACCATGGTAAAAAGCCT | 59.458 | 36.000 | 19.28 | 0.00 | 36.86 | 4.58 |
3900 | 4014 | 5.789521 | ACAATTACACCATGGTAAAAAGCC | 58.210 | 37.500 | 19.28 | 0.00 | 36.86 | 4.35 |
3901 | 4015 | 6.147000 | CCAACAATTACACCATGGTAAAAAGC | 59.853 | 38.462 | 19.28 | 0.00 | 36.86 | 3.51 |
3902 | 4016 | 6.147000 | GCCAACAATTACACCATGGTAAAAAG | 59.853 | 38.462 | 19.28 | 7.40 | 36.86 | 2.27 |
3903 | 4017 | 5.992217 | GCCAACAATTACACCATGGTAAAAA | 59.008 | 36.000 | 19.28 | 12.38 | 36.86 | 1.94 |
3909 | 4025 | 3.130340 | GGTAGCCAACAATTACACCATGG | 59.870 | 47.826 | 11.19 | 11.19 | 0.00 | 3.66 |
3965 | 4081 | 2.157738 | GAAACAATCCAGCAGCAGAGT | 58.842 | 47.619 | 0.00 | 0.00 | 0.00 | 3.24 |
3976 | 4092 | 2.819608 | TGTTAGCCAGCTGAAACAATCC | 59.180 | 45.455 | 17.39 | 0.00 | 0.00 | 3.01 |
4021 | 4137 | 2.768344 | AGCGTCCCATACCCCTGG | 60.768 | 66.667 | 0.00 | 0.00 | 35.95 | 4.45 |
4201 | 4317 | 5.973899 | TTCTAGTTGCAATACAATTGCCA | 57.026 | 34.783 | 18.99 | 8.01 | 44.32 | 4.92 |
4274 | 4393 | 8.233868 | AGGCAAACACAAAACTTTCAAAATAAC | 58.766 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
4275 | 4394 | 8.329203 | AGGCAAACACAAAACTTTCAAAATAA | 57.671 | 26.923 | 0.00 | 0.00 | 0.00 | 1.40 |
4276 | 4395 | 7.913674 | AGGCAAACACAAAACTTTCAAAATA | 57.086 | 28.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4286 | 4405 | 4.562789 | GTCTGAAGAAGGCAAACACAAAAC | 59.437 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
4340 | 4460 | 2.035066 | GCATGGATTACACCATTCTGCC | 59.965 | 50.000 | 0.00 | 0.00 | 47.00 | 4.85 |
4364 | 4488 | 7.424227 | AACTAAATCGTCGTGTTTAATTGGA | 57.576 | 32.000 | 0.00 | 0.00 | 0.00 | 3.53 |
4372 | 4521 | 7.878477 | TCTCAAATAACTAAATCGTCGTGTT | 57.122 | 32.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4514 | 4663 | 9.528489 | TGAAAATAAGGCTAAGAGGTAAACATT | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
4546 | 4705 | 5.674525 | TCACCATGTTTCTAGGAATAGCTG | 58.325 | 41.667 | 0.00 | 0.00 | 0.00 | 4.24 |
4570 | 4729 | 8.925161 | GAGATGGTCTCTTAGCATAATATGTC | 57.075 | 38.462 | 1.92 | 0.00 | 46.22 | 3.06 |
4637 | 4799 | 6.005823 | TCATGCAGGATAAATGATAAGGTGG | 58.994 | 40.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4645 | 4807 | 6.692849 | AGGAGTATCATGCAGGATAAATGA | 57.307 | 37.500 | 21.69 | 4.43 | 36.25 | 2.57 |
4653 | 4815 | 4.382470 | GGTGCTATAGGAGTATCATGCAGG | 60.382 | 50.000 | 1.04 | 0.00 | 36.25 | 4.85 |
4656 | 4818 | 4.808414 | TGGTGCTATAGGAGTATCATGC | 57.192 | 45.455 | 1.04 | 0.00 | 36.25 | 4.06 |
4660 | 4822 | 7.363094 | GGAGTACAATGGTGCTATAGGAGTATC | 60.363 | 44.444 | 1.04 | 0.00 | 40.28 | 2.24 |
4662 | 4824 | 5.773680 | GGAGTACAATGGTGCTATAGGAGTA | 59.226 | 44.000 | 1.04 | 0.00 | 40.28 | 2.59 |
4666 | 4828 | 3.904339 | AGGGAGTACAATGGTGCTATAGG | 59.096 | 47.826 | 1.04 | 0.00 | 40.28 | 2.57 |
4667 | 4829 | 4.021016 | GGAGGGAGTACAATGGTGCTATAG | 60.021 | 50.000 | 0.00 | 0.00 | 40.28 | 1.31 |
4677 | 4842 | 2.249309 | AGGAACGGAGGGAGTACAAT | 57.751 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
4702 | 4867 | 9.847224 | ACTTGTTGAAATCTCTAAAAAGACCTA | 57.153 | 29.630 | 0.00 | 0.00 | 0.00 | 3.08 |
4703 | 4868 | 8.624776 | CACTTGTTGAAATCTCTAAAAAGACCT | 58.375 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
4704 | 4869 | 8.621286 | TCACTTGTTGAAATCTCTAAAAAGACC | 58.379 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
4713 | 4878 | 8.873830 | CGTATGTAATCACTTGTTGAAATCTCT | 58.126 | 33.333 | 0.00 | 0.00 | 37.92 | 3.10 |
4714 | 4879 | 8.116753 | CCGTATGTAATCACTTGTTGAAATCTC | 58.883 | 37.037 | 0.00 | 0.00 | 37.92 | 2.75 |
4715 | 4880 | 7.822334 | TCCGTATGTAATCACTTGTTGAAATCT | 59.178 | 33.333 | 0.00 | 0.00 | 37.92 | 2.40 |
4716 | 4881 | 7.970384 | TCCGTATGTAATCACTTGTTGAAATC | 58.030 | 34.615 | 0.00 | 0.00 | 37.92 | 2.17 |
4717 | 4882 | 7.915293 | TCCGTATGTAATCACTTGTTGAAAT | 57.085 | 32.000 | 0.00 | 0.00 | 37.92 | 2.17 |
4718 | 4883 | 7.822334 | AGATCCGTATGTAATCACTTGTTGAAA | 59.178 | 33.333 | 0.00 | 0.00 | 37.92 | 2.69 |
4719 | 4884 | 7.327975 | AGATCCGTATGTAATCACTTGTTGAA | 58.672 | 34.615 | 0.00 | 0.00 | 37.92 | 2.69 |
4720 | 4885 | 6.873997 | AGATCCGTATGTAATCACTTGTTGA | 58.126 | 36.000 | 0.00 | 0.00 | 39.11 | 3.18 |
4721 | 4886 | 7.704899 | TGTAGATCCGTATGTAATCACTTGTTG | 59.295 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
4722 | 4887 | 7.705325 | GTGTAGATCCGTATGTAATCACTTGTT | 59.295 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
4723 | 4888 | 7.068348 | AGTGTAGATCCGTATGTAATCACTTGT | 59.932 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
4724 | 4889 | 7.426410 | AGTGTAGATCCGTATGTAATCACTTG | 58.574 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
4725 | 4890 | 7.502895 | AGAGTGTAGATCCGTATGTAATCACTT | 59.497 | 37.037 | 0.00 | 0.00 | 33.55 | 3.16 |
4726 | 4891 | 6.999272 | AGAGTGTAGATCCGTATGTAATCACT | 59.001 | 38.462 | 0.00 | 0.00 | 35.58 | 3.41 |
4727 | 4892 | 7.204496 | AGAGTGTAGATCCGTATGTAATCAC | 57.796 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
4728 | 4893 | 8.913487 | TTAGAGTGTAGATCCGTATGTAATCA | 57.087 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
4802 | 4967 | 9.780186 | CTCCTCCGTTCCTAAATATAATTCTTT | 57.220 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
4803 | 4968 | 8.935741 | ACTCCTCCGTTCCTAAATATAATTCTT | 58.064 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
4804 | 4969 | 8.493787 | ACTCCTCCGTTCCTAAATATAATTCT | 57.506 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
4805 | 4970 | 9.636879 | GTACTCCTCCGTTCCTAAATATAATTC | 57.363 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
4806 | 4971 | 9.151177 | TGTACTCCTCCGTTCCTAAATATAATT | 57.849 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
4807 | 4972 | 8.716674 | TGTACTCCTCCGTTCCTAAATATAAT | 57.283 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
4808 | 4973 | 8.582437 | CATGTACTCCTCCGTTCCTAAATATAA | 58.418 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
4809 | 4974 | 7.309621 | GCATGTACTCCTCCGTTCCTAAATATA | 60.310 | 40.741 | 0.00 | 0.00 | 0.00 | 0.86 |
4810 | 4975 | 6.518537 | GCATGTACTCCTCCGTTCCTAAATAT | 60.519 | 42.308 | 0.00 | 0.00 | 0.00 | 1.28 |
4811 | 4976 | 5.221382 | GCATGTACTCCTCCGTTCCTAAATA | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4812 | 4977 | 4.443034 | GCATGTACTCCTCCGTTCCTAAAT | 60.443 | 45.833 | 0.00 | 0.00 | 0.00 | 1.40 |
4813 | 4978 | 3.118884 | GCATGTACTCCTCCGTTCCTAAA | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 1.85 |
4814 | 4979 | 2.429610 | GCATGTACTCCTCCGTTCCTAA | 59.570 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4815 | 4980 | 2.029623 | GCATGTACTCCTCCGTTCCTA | 58.970 | 52.381 | 0.00 | 0.00 | 0.00 | 2.94 |
4816 | 4981 | 0.824759 | GCATGTACTCCTCCGTTCCT | 59.175 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
4817 | 4982 | 0.179081 | GGCATGTACTCCTCCGTTCC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
4818 | 4983 | 0.179081 | GGGCATGTACTCCTCCGTTC | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
4819 | 4984 | 0.617820 | AGGGCATGTACTCCTCCGTT | 60.618 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
4820 | 4985 | 0.617820 | AAGGGCATGTACTCCTCCGT | 60.618 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
4821 | 4986 | 0.179073 | CAAGGGCATGTACTCCTCCG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4822 | 4987 | 0.464554 | GCAAGGGCATGTACTCCTCC | 60.465 | 60.000 | 0.00 | 0.00 | 40.72 | 4.30 |
4823 | 4988 | 0.464554 | GGCAAGGGCATGTACTCCTC | 60.465 | 60.000 | 0.00 | 0.00 | 43.71 | 3.71 |
4824 | 4989 | 1.609783 | GGCAAGGGCATGTACTCCT | 59.390 | 57.895 | 0.00 | 0.00 | 43.71 | 3.69 |
4825 | 4990 | 1.453928 | GGGCAAGGGCATGTACTCC | 60.454 | 63.158 | 0.00 | 0.00 | 43.71 | 3.85 |
4826 | 4991 | 1.819632 | CGGGCAAGGGCATGTACTC | 60.820 | 63.158 | 0.00 | 0.00 | 43.71 | 2.59 |
4827 | 4992 | 2.272146 | CGGGCAAGGGCATGTACT | 59.728 | 61.111 | 0.00 | 0.00 | 43.71 | 2.73 |
4828 | 4993 | 3.518068 | GCGGGCAAGGGCATGTAC | 61.518 | 66.667 | 0.00 | 0.00 | 43.71 | 2.90 |
4829 | 4994 | 4.040426 | TGCGGGCAAGGGCATGTA | 62.040 | 61.111 | 0.00 | 0.00 | 43.71 | 2.29 |
4833 | 4998 | 4.445710 | ATCATGCGGGCAAGGGCA | 62.446 | 61.111 | 0.00 | 0.00 | 43.71 | 5.36 |
4834 | 4999 | 3.908081 | CATCATGCGGGCAAGGGC | 61.908 | 66.667 | 0.00 | 0.00 | 40.13 | 5.19 |
4835 | 5000 | 2.440796 | ACATCATGCGGGCAAGGG | 60.441 | 61.111 | 0.00 | 0.00 | 0.00 | 3.95 |
4836 | 5001 | 0.747644 | TACACATCATGCGGGCAAGG | 60.748 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
4837 | 5002 | 1.002142 | CATACACATCATGCGGGCAAG | 60.002 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
4838 | 5003 | 1.023502 | CATACACATCATGCGGGCAA | 58.976 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
4839 | 5004 | 1.446516 | GCATACACATCATGCGGGCA | 61.447 | 55.000 | 0.00 | 0.00 | 39.43 | 5.36 |
4840 | 5005 | 1.283793 | GCATACACATCATGCGGGC | 59.716 | 57.895 | 0.00 | 0.00 | 39.43 | 6.13 |
4893 | 5058 | 6.098838 | TGCACCTAGTGATCATTCATTACTCT | 59.901 | 38.462 | 0.00 | 0.00 | 35.23 | 3.24 |
4914 | 5080 | 9.937175 | GACTATTCCTGTAAATAATCTTTGCAC | 57.063 | 33.333 | 0.00 | 0.00 | 0.00 | 4.57 |
4915 | 5081 | 9.120538 | GGACTATTCCTGTAAATAATCTTTGCA | 57.879 | 33.333 | 0.00 | 0.00 | 39.13 | 4.08 |
4916 | 5082 | 8.568794 | GGGACTATTCCTGTAAATAATCTTTGC | 58.431 | 37.037 | 0.00 | 0.00 | 42.38 | 3.68 |
4917 | 5083 | 9.627123 | TGGGACTATTCCTGTAAATAATCTTTG | 57.373 | 33.333 | 0.00 | 0.00 | 42.38 | 2.77 |
4920 | 5086 | 7.070821 | ACGTGGGACTATTCCTGTAAATAATCT | 59.929 | 37.037 | 0.00 | 0.00 | 42.38 | 2.40 |
4921 | 5087 | 7.215085 | ACGTGGGACTATTCCTGTAAATAATC | 58.785 | 38.462 | 0.00 | 0.00 | 42.38 | 1.75 |
4922 | 5088 | 7.133133 | ACGTGGGACTATTCCTGTAAATAAT | 57.867 | 36.000 | 0.00 | 0.00 | 42.38 | 1.28 |
4924 | 5090 | 5.657745 | TGACGTGGGACTATTCCTGTAAATA | 59.342 | 40.000 | 0.00 | 0.00 | 42.38 | 1.40 |
4925 | 5091 | 4.468510 | TGACGTGGGACTATTCCTGTAAAT | 59.531 | 41.667 | 0.00 | 0.00 | 42.38 | 1.40 |
4926 | 5092 | 3.833650 | TGACGTGGGACTATTCCTGTAAA | 59.166 | 43.478 | 0.00 | 0.00 | 42.38 | 2.01 |
4935 | 5101 | 1.183549 | GGAGTGTGACGTGGGACTAT | 58.816 | 55.000 | 0.00 | 0.00 | 0.00 | 2.12 |
4955 | 5121 | 8.367911 | TCACTGTCCGATAAAAATAGCAGATAT | 58.632 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
4958 | 5124 | 5.972935 | TCACTGTCCGATAAAAATAGCAGA | 58.027 | 37.500 | 0.00 | 0.00 | 0.00 | 4.26 |
4960 | 5126 | 5.730550 | ACTCACTGTCCGATAAAAATAGCA | 58.269 | 37.500 | 0.00 | 0.00 | 0.00 | 3.49 |
4966 | 5132 | 5.471556 | TTGGTACTCACTGTCCGATAAAA | 57.528 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
4985 | 5151 | 0.522495 | CGCGCCCGAAAAACTATTGG | 60.522 | 55.000 | 0.00 | 0.00 | 36.29 | 3.16 |
5064 | 5408 | 7.029563 | CAGTATGTATTCCTTTCTGGCAAAAC | 58.970 | 38.462 | 0.00 | 0.00 | 35.26 | 2.43 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.