Multiple sequence alignment - TraesCS2B01G358100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G358100 chr2B 100.000 2892 0 0 1 2892 510899099 510896208 0.000000e+00 5341.0
1 TraesCS2B01G358100 chr2B 79.487 234 30 14 271 495 43780299 43780075 2.080000e-32 150.0
2 TraesCS2B01G358100 chr2B 77.823 248 34 15 270 503 188527317 188527077 2.090000e-27 134.0
3 TraesCS2B01G358100 chr2B 100.000 70 0 0 3275 3344 510895825 510895756 2.710000e-26 130.0
4 TraesCS2B01G358100 chr2D 88.963 2392 161 40 533 2892 432081521 432079201 0.000000e+00 2859.0
5 TraesCS2B01G358100 chr2D 89.503 181 14 5 485 664 432081776 432081600 1.210000e-54 224.0
6 TraesCS2B01G358100 chr2D 96.552 116 4 0 1632 1747 461078487 461078372 3.400000e-45 193.0
7 TraesCS2B01G358100 chr2D 93.600 125 8 0 1626 1750 352709821 352709945 1.580000e-43 187.0
8 TraesCS2B01G358100 chr2D 85.870 184 12 5 1211 1391 461078653 461078481 2.050000e-42 183.0
9 TraesCS2B01G358100 chr2D 85.165 182 17 3 1211 1391 352709661 352709833 9.530000e-41 178.0
10 TraesCS2B01G358100 chr2D 94.286 70 4 0 3275 3344 432079147 432079078 1.270000e-19 108.0
11 TraesCS2B01G358100 chr2D 87.500 56 6 1 2595 2650 45090262 45090208 2.790000e-06 63.9
12 TraesCS2B01G358100 chr2A 90.727 1898 90 29 650 2530 554414632 554416460 0.000000e+00 2451.0
13 TraesCS2B01G358100 chr2A 87.047 193 17 5 485 670 554414248 554414439 9.400000e-51 211.0
14 TraesCS2B01G358100 chr6D 93.458 321 21 0 1506 1826 456305687 456305367 8.390000e-131 477.0
15 TraesCS2B01G358100 chr6D 97.414 116 3 0 1933 2048 456305370 456305255 7.320000e-47 198.0
16 TraesCS2B01G358100 chr6D 89.908 109 7 2 21 125 438519949 438519841 1.620000e-28 137.0
17 TraesCS2B01G358100 chr7D 93.004 243 17 0 1506 1748 171027892 171028134 4.100000e-94 355.0
18 TraesCS2B01G358100 chr7D 96.850 127 4 0 1341 1467 171027774 171027900 2.610000e-51 213.0
19 TraesCS2B01G358100 chr7D 79.464 224 31 13 271 486 377039103 377039319 9.670000e-31 145.0
20 TraesCS2B01G358100 chr7D 85.821 134 10 1 1211 1344 171013684 171013808 2.090000e-27 134.0
21 TraesCS2B01G358100 chr1D 95.652 115 5 0 1634 1748 307206329 307206443 5.700000e-43 185.0
22 TraesCS2B01G358100 chr1D 94.444 54 3 0 2595 2648 349546031 349546084 2.140000e-12 84.2
23 TraesCS2B01G358100 chr1B 94.828 116 6 0 1632 1747 646571815 646571700 7.370000e-42 182.0
24 TraesCS2B01G358100 chr1B 81.313 198 25 7 1211 1405 646571981 646571793 2.080000e-32 150.0
25 TraesCS2B01G358100 chr1B 77.500 200 30 12 296 488 654081925 654082116 4.560000e-19 106.0
26 TraesCS2B01G358100 chr6B 80.909 220 39 3 269 487 144035919 144036136 1.600000e-38 171.0
27 TraesCS2B01G358100 chr5B 80.995 221 37 5 270 488 622495033 622495250 1.600000e-38 171.0
28 TraesCS2B01G358100 chr3D 81.731 208 30 5 21 223 1968452 1968248 2.060000e-37 167.0
29 TraesCS2B01G358100 chr3D 86.441 59 8 0 2595 2653 586876710 586876652 7.740000e-07 65.8
30 TraesCS2B01G358100 chr7B 81.553 206 32 3 21 223 624635526 624635324 7.420000e-37 165.0
31 TraesCS2B01G358100 chr7B 81.250 208 31 8 282 487 68721120 68721321 9.600000e-36 161.0
32 TraesCS2B01G358100 chr7B 87.719 57 7 0 2595 2651 623563604 623563660 2.150000e-07 67.6
33 TraesCS2B01G358100 chr7B 91.304 46 4 0 2599 2644 716999162 716999117 2.790000e-06 63.9
34 TraesCS2B01G358100 chr4A 79.817 218 35 9 274 487 70860132 70859920 2.080000e-32 150.0
35 TraesCS2B01G358100 chr7A 77.489 231 42 8 269 494 731358157 731358382 2.710000e-26 130.0
36 TraesCS2B01G358100 chr3A 95.918 49 2 0 2595 2643 480153827 480153875 2.770000e-11 80.5
37 TraesCS2B01G358100 chr3A 86.207 58 8 0 2595 2652 456865224 456865167 2.790000e-06 63.9
38 TraesCS2B01G358100 chr5D 92.157 51 4 0 2601 2651 355218919 355218869 4.630000e-09 73.1
39 TraesCS2B01G358100 chr5A 92.308 52 3 1 2601 2651 513909312 513909261 4.630000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G358100 chr2B 510895756 510899099 3343 True 2735.500000 5341 100.000000 1 3344 2 chr2B.!!$R3 3343
1 TraesCS2B01G358100 chr2D 432079078 432081776 2698 True 1063.666667 2859 90.917333 485 3344 3 chr2D.!!$R2 2859
2 TraesCS2B01G358100 chr2A 554414248 554416460 2212 False 1331.000000 2451 88.887000 485 2530 2 chr2A.!!$F1 2045

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
312 313 0.037975 TTACCAGAGGCCGTCGTTTC 60.038 55.0 0.0 0.0 0.00 2.78 F
462 463 0.107703 CGCTGTGAGGGCAGGAATTA 60.108 55.0 0.0 0.0 37.00 1.40 F
983 1276 0.179084 TCCATTCCAATCGAGCCGAC 60.179 55.0 0.0 0.0 39.18 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1671 1971 0.898789 TGTCCCAGGAGACGGAGAAC 60.899 60.0 0.00 0.0 39.77 3.01 R
2262 2562 0.978146 ACACCCTCCATTCCTCCTCG 60.978 60.0 0.00 0.0 0.00 4.63 R
2484 2790 0.038159 AGAAGTTCGCCGAAGTCCAG 60.038 55.0 7.76 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.092348 GGCAACGGGTTCTCATTACC 58.908 55.000 0.00 0.00 34.82 2.85
34 35 4.402056 GGGTTCTCATTACCGATTGAGA 57.598 45.455 0.00 0.00 44.94 3.27
40 41 5.428253 TCTCATTACCGATTGAGAAAAGGG 58.572 41.667 0.36 0.00 43.97 3.95
41 42 4.523083 TCATTACCGATTGAGAAAAGGGG 58.477 43.478 0.00 0.00 0.00 4.79
42 43 2.413310 TACCGATTGAGAAAAGGGGC 57.587 50.000 0.00 0.00 0.00 5.80
43 44 0.404040 ACCGATTGAGAAAAGGGGCA 59.596 50.000 0.00 0.00 0.00 5.36
44 45 1.098050 CCGATTGAGAAAAGGGGCAG 58.902 55.000 0.00 0.00 0.00 4.85
45 46 1.614317 CCGATTGAGAAAAGGGGCAGT 60.614 52.381 0.00 0.00 0.00 4.40
46 47 1.470098 CGATTGAGAAAAGGGGCAGTG 59.530 52.381 0.00 0.00 0.00 3.66
47 48 2.519013 GATTGAGAAAAGGGGCAGTGT 58.481 47.619 0.00 0.00 0.00 3.55
48 49 2.452600 TTGAGAAAAGGGGCAGTGTT 57.547 45.000 0.00 0.00 0.00 3.32
49 50 1.691196 TGAGAAAAGGGGCAGTGTTG 58.309 50.000 0.00 0.00 0.00 3.33
50 51 0.961753 GAGAAAAGGGGCAGTGTTGG 59.038 55.000 0.00 0.00 0.00 3.77
51 52 0.469892 AGAAAAGGGGCAGTGTTGGG 60.470 55.000 0.00 0.00 0.00 4.12
52 53 0.469144 GAAAAGGGGCAGTGTTGGGA 60.469 55.000 0.00 0.00 0.00 4.37
53 54 0.469892 AAAAGGGGCAGTGTTGGGAG 60.470 55.000 0.00 0.00 0.00 4.30
54 55 1.360393 AAAGGGGCAGTGTTGGGAGA 61.360 55.000 0.00 0.00 0.00 3.71
55 56 1.360393 AAGGGGCAGTGTTGGGAGAA 61.360 55.000 0.00 0.00 0.00 2.87
56 57 1.303643 GGGGCAGTGTTGGGAGAAG 60.304 63.158 0.00 0.00 0.00 2.85
57 58 1.973812 GGGCAGTGTTGGGAGAAGC 60.974 63.158 0.00 0.00 0.00 3.86
58 59 1.228245 GGCAGTGTTGGGAGAAGCA 60.228 57.895 0.00 0.00 0.00 3.91
59 60 0.610232 GGCAGTGTTGGGAGAAGCAT 60.610 55.000 0.00 0.00 0.00 3.79
60 61 1.340017 GGCAGTGTTGGGAGAAGCATA 60.340 52.381 0.00 0.00 0.00 3.14
61 62 1.740025 GCAGTGTTGGGAGAAGCATAC 59.260 52.381 0.00 0.00 0.00 2.39
62 63 2.002586 CAGTGTTGGGAGAAGCATACG 58.997 52.381 0.00 0.00 0.00 3.06
63 64 0.727398 GTGTTGGGAGAAGCATACGC 59.273 55.000 0.00 0.00 38.99 4.42
64 65 0.392461 TGTTGGGAGAAGCATACGCC 60.392 55.000 0.00 0.00 39.83 5.68
65 66 1.153449 TTGGGAGAAGCATACGCCG 60.153 57.895 0.00 0.00 39.83 6.46
66 67 1.895020 TTGGGAGAAGCATACGCCGT 61.895 55.000 0.00 0.00 39.83 5.68
67 68 1.591863 GGGAGAAGCATACGCCGTC 60.592 63.158 0.00 0.00 39.83 4.79
68 69 1.141019 GGAGAAGCATACGCCGTCA 59.859 57.895 0.00 0.00 39.83 4.35
69 70 0.459585 GGAGAAGCATACGCCGTCAA 60.460 55.000 0.00 0.00 39.83 3.18
70 71 0.924090 GAGAAGCATACGCCGTCAAG 59.076 55.000 0.00 0.00 39.83 3.02
71 72 0.460284 AGAAGCATACGCCGTCAAGG 60.460 55.000 0.00 0.00 44.97 3.61
72 73 0.739813 GAAGCATACGCCGTCAAGGT 60.740 55.000 0.00 0.00 43.70 3.50
78 79 2.264480 CGCCGTCAAGGTGGATGA 59.736 61.111 0.00 0.00 46.57 2.92
79 80 2.100631 CGCCGTCAAGGTGGATGAC 61.101 63.158 0.00 0.00 46.57 3.06
80 81 1.745489 GCCGTCAAGGTGGATGACC 60.745 63.158 1.45 0.00 43.34 4.02
87 88 2.512515 GGTGGATGACCTGCGAGC 60.513 66.667 0.00 0.00 42.25 5.03
88 89 2.512515 GTGGATGACCTGCGAGCC 60.513 66.667 0.00 0.00 37.04 4.70
89 90 4.147449 TGGATGACCTGCGAGCCG 62.147 66.667 0.00 0.00 37.04 5.52
90 91 4.899239 GGATGACCTGCGAGCCGG 62.899 72.222 0.00 0.00 0.00 6.13
91 92 4.148825 GATGACCTGCGAGCCGGT 62.149 66.667 10.92 10.92 35.90 5.28
92 93 4.457496 ATGACCTGCGAGCCGGTG 62.457 66.667 15.69 0.00 32.62 4.94
118 119 3.407967 GGACCTTGGATCCGCCCA 61.408 66.667 7.39 0.00 34.97 5.36
119 120 2.674754 GACCTTGGATCCGCCCAA 59.325 61.111 7.39 0.00 43.42 4.12
123 124 3.176297 TTGGATCCGCCCAAGGTT 58.824 55.556 7.39 0.00 40.99 3.50
124 125 1.304052 TTGGATCCGCCCAAGGTTG 60.304 57.895 7.39 0.00 40.99 3.77
125 126 1.784301 TTGGATCCGCCCAAGGTTGA 61.784 55.000 7.39 0.00 40.99 3.18
126 127 1.452108 GGATCCGCCCAAGGTTGAG 60.452 63.158 0.00 0.00 0.00 3.02
127 128 1.602237 GATCCGCCCAAGGTTGAGA 59.398 57.895 0.00 0.00 0.00 3.27
128 129 0.181350 GATCCGCCCAAGGTTGAGAT 59.819 55.000 0.00 0.00 0.00 2.75
129 130 0.181350 ATCCGCCCAAGGTTGAGATC 59.819 55.000 0.00 0.00 0.00 2.75
130 131 1.815421 CCGCCCAAGGTTGAGATCG 60.815 63.158 0.00 0.00 0.00 3.69
131 132 2.464459 CGCCCAAGGTTGAGATCGC 61.464 63.158 0.00 0.00 0.00 4.58
132 133 2.115291 GCCCAAGGTTGAGATCGCC 61.115 63.158 0.00 0.00 0.00 5.54
133 134 1.299648 CCCAAGGTTGAGATCGCCA 59.700 57.895 0.00 0.00 0.00 5.69
134 135 0.745845 CCCAAGGTTGAGATCGCCAG 60.746 60.000 0.00 0.00 0.00 4.85
135 136 0.250234 CCAAGGTTGAGATCGCCAGA 59.750 55.000 0.00 0.00 0.00 3.86
136 137 1.649664 CAAGGTTGAGATCGCCAGAG 58.350 55.000 0.00 0.00 0.00 3.35
137 138 1.205655 CAAGGTTGAGATCGCCAGAGA 59.794 52.381 0.00 0.00 0.00 3.10
138 139 1.110442 AGGTTGAGATCGCCAGAGAG 58.890 55.000 0.00 0.00 0.00 3.20
139 140 0.103937 GGTTGAGATCGCCAGAGAGG 59.896 60.000 0.00 0.00 41.84 3.69
140 141 1.107114 GTTGAGATCGCCAGAGAGGA 58.893 55.000 0.00 0.00 41.22 3.71
141 142 1.066908 GTTGAGATCGCCAGAGAGGAG 59.933 57.143 0.00 0.00 41.22 3.69
145 146 3.091694 TCGCCAGAGAGGAGAGGT 58.908 61.111 0.00 0.00 41.68 3.85
146 147 1.077357 TCGCCAGAGAGGAGAGGTC 60.077 63.158 0.00 0.00 41.68 3.85
147 148 2.477176 CGCCAGAGAGGAGAGGTCG 61.477 68.421 0.00 0.00 40.01 4.79
148 149 2.124693 GCCAGAGAGGAGAGGTCGG 61.125 68.421 0.00 0.00 41.22 4.79
149 150 2.124693 CCAGAGAGGAGAGGTCGGC 61.125 68.421 0.00 0.00 41.22 5.54
150 151 1.379176 CAGAGAGGAGAGGTCGGCA 60.379 63.158 0.00 0.00 0.00 5.69
151 152 1.077068 AGAGAGGAGAGGTCGGCAG 60.077 63.158 0.00 0.00 0.00 4.85
152 153 2.043450 AGAGGAGAGGTCGGCAGG 60.043 66.667 0.00 0.00 0.00 4.85
153 154 2.043852 GAGGAGAGGTCGGCAGGA 60.044 66.667 0.00 0.00 0.00 3.86
154 155 2.363147 AGGAGAGGTCGGCAGGAC 60.363 66.667 0.00 0.00 45.31 3.85
155 156 2.363147 GGAGAGGTCGGCAGGACT 60.363 66.667 7.04 0.00 45.35 3.85
156 157 1.076923 GGAGAGGTCGGCAGGACTA 60.077 63.158 7.04 0.00 45.35 2.59
157 158 1.385756 GGAGAGGTCGGCAGGACTAC 61.386 65.000 7.04 2.76 45.35 2.73
158 159 0.394625 GAGAGGTCGGCAGGACTACT 60.395 60.000 7.04 6.69 45.35 2.57
159 160 0.039911 AGAGGTCGGCAGGACTACTT 59.960 55.000 7.04 0.00 45.35 2.24
160 161 0.173708 GAGGTCGGCAGGACTACTTG 59.826 60.000 7.04 0.00 45.35 3.16
161 162 1.218316 GGTCGGCAGGACTACTTGG 59.782 63.158 7.04 0.00 45.35 3.61
162 163 1.218316 GTCGGCAGGACTACTTGGG 59.782 63.158 0.29 0.00 42.62 4.12
163 164 1.077805 TCGGCAGGACTACTTGGGA 59.922 57.895 0.00 0.00 0.00 4.37
164 165 0.970937 TCGGCAGGACTACTTGGGAG 60.971 60.000 0.00 0.00 0.00 4.30
165 166 1.908483 GGCAGGACTACTTGGGAGG 59.092 63.158 0.00 0.00 0.00 4.30
166 167 1.627297 GGCAGGACTACTTGGGAGGG 61.627 65.000 0.00 0.00 0.00 4.30
167 168 0.617820 GCAGGACTACTTGGGAGGGA 60.618 60.000 0.00 0.00 0.00 4.20
168 169 1.972207 GCAGGACTACTTGGGAGGGAT 60.972 57.143 0.00 0.00 0.00 3.85
169 170 1.765314 CAGGACTACTTGGGAGGGATG 59.235 57.143 0.00 0.00 0.00 3.51
170 171 1.132500 GGACTACTTGGGAGGGATGG 58.868 60.000 0.00 0.00 0.00 3.51
171 172 1.132500 GACTACTTGGGAGGGATGGG 58.868 60.000 0.00 0.00 0.00 4.00
172 173 0.421904 ACTACTTGGGAGGGATGGGT 59.578 55.000 0.00 0.00 0.00 4.51
173 174 1.132500 CTACTTGGGAGGGATGGGTC 58.868 60.000 0.00 0.00 0.00 4.46
174 175 0.327191 TACTTGGGAGGGATGGGTCC 60.327 60.000 0.00 0.00 44.29 4.46
182 183 4.035843 GGATGGGTCCACTCGTCT 57.964 61.111 0.00 0.00 44.42 4.18
183 184 3.202548 GGATGGGTCCACTCGTCTA 57.797 57.895 0.00 0.00 44.42 2.59
184 185 1.705873 GGATGGGTCCACTCGTCTAT 58.294 55.000 0.00 0.00 44.42 1.98
185 186 1.614413 GGATGGGTCCACTCGTCTATC 59.386 57.143 0.00 0.00 44.42 2.08
186 187 1.614413 GATGGGTCCACTCGTCTATCC 59.386 57.143 0.00 0.00 0.00 2.59
187 188 0.396695 TGGGTCCACTCGTCTATCCC 60.397 60.000 0.00 0.00 0.00 3.85
188 189 1.114119 GGGTCCACTCGTCTATCCCC 61.114 65.000 0.00 0.00 0.00 4.81
189 190 0.106116 GGTCCACTCGTCTATCCCCT 60.106 60.000 0.00 0.00 0.00 4.79
190 191 1.320507 GTCCACTCGTCTATCCCCTC 58.679 60.000 0.00 0.00 0.00 4.30
191 192 0.179026 TCCACTCGTCTATCCCCTCG 60.179 60.000 0.00 0.00 0.00 4.63
192 193 1.655329 CACTCGTCTATCCCCTCGC 59.345 63.158 0.00 0.00 0.00 5.03
193 194 1.892862 ACTCGTCTATCCCCTCGCG 60.893 63.158 0.00 0.00 0.00 5.87
194 195 1.892862 CTCGTCTATCCCCTCGCGT 60.893 63.158 5.77 0.00 0.00 6.01
195 196 1.445716 CTCGTCTATCCCCTCGCGTT 61.446 60.000 5.77 0.00 0.00 4.84
196 197 1.299165 CGTCTATCCCCTCGCGTTG 60.299 63.158 5.77 0.00 0.00 4.10
197 198 1.067582 GTCTATCCCCTCGCGTTGG 59.932 63.158 5.77 10.06 0.00 3.77
198 199 1.076559 TCTATCCCCTCGCGTTGGA 60.077 57.895 19.23 16.82 0.00 3.53
199 200 0.469331 TCTATCCCCTCGCGTTGGAT 60.469 55.000 23.05 23.05 41.64 3.41
200 201 0.038159 CTATCCCCTCGCGTTGGATC 60.038 60.000 23.13 0.00 39.55 3.36
201 202 1.469335 TATCCCCTCGCGTTGGATCC 61.469 60.000 23.13 4.20 39.55 3.36
202 203 4.547367 CCCCTCGCGTTGGATCCC 62.547 72.222 19.23 0.00 0.00 3.85
203 204 4.547367 CCCTCGCGTTGGATCCCC 62.547 72.222 19.23 0.00 0.00 4.81
204 205 3.470888 CCTCGCGTTGGATCCCCT 61.471 66.667 9.90 0.00 0.00 4.79
205 206 2.107141 CTCGCGTTGGATCCCCTC 59.893 66.667 9.90 0.00 0.00 4.30
206 207 3.774959 CTCGCGTTGGATCCCCTCG 62.775 68.421 9.90 12.14 35.13 4.63
207 208 4.143333 CGCGTTGGATCCCCTCGT 62.143 66.667 9.90 0.00 34.75 4.18
208 209 2.511600 GCGTTGGATCCCCTCGTG 60.512 66.667 9.90 0.00 34.75 4.35
209 210 2.186903 CGTTGGATCCCCTCGTGG 59.813 66.667 9.90 0.00 0.00 4.94
210 211 2.124695 GTTGGATCCCCTCGTGGC 60.125 66.667 9.90 0.00 0.00 5.01
211 212 3.781307 TTGGATCCCCTCGTGGCG 61.781 66.667 9.90 0.00 0.00 5.69
237 238 2.499685 GGATCCGTTCCACGAGGG 59.500 66.667 0.00 0.00 46.05 4.30
238 239 2.356780 GGATCCGTTCCACGAGGGT 61.357 63.158 0.00 0.00 46.05 4.34
239 240 1.153628 GATCCGTTCCACGAGGGTG 60.154 63.158 0.00 0.00 46.05 4.61
240 241 1.885163 GATCCGTTCCACGAGGGTGT 61.885 60.000 0.00 0.00 46.05 4.16
241 242 0.612732 ATCCGTTCCACGAGGGTGTA 60.613 55.000 0.00 0.00 46.05 2.90
242 243 0.827089 TCCGTTCCACGAGGGTGTAA 60.827 55.000 0.00 0.00 46.05 2.41
243 244 0.248289 CCGTTCCACGAGGGTGTAAT 59.752 55.000 0.00 0.00 46.05 1.89
244 245 1.355971 CGTTCCACGAGGGTGTAATG 58.644 55.000 0.00 0.00 46.05 1.90
245 246 1.734163 GTTCCACGAGGGTGTAATGG 58.266 55.000 0.00 0.00 42.80 3.16
246 247 1.276989 GTTCCACGAGGGTGTAATGGA 59.723 52.381 0.00 0.00 42.80 3.41
247 248 1.874129 TCCACGAGGGTGTAATGGAT 58.126 50.000 0.00 0.00 42.80 3.41
248 249 1.760613 TCCACGAGGGTGTAATGGATC 59.239 52.381 0.00 0.00 42.80 3.36
249 250 1.202651 CCACGAGGGTGTAATGGATCC 60.203 57.143 4.20 4.20 42.80 3.36
250 251 1.129058 ACGAGGGTGTAATGGATCCC 58.871 55.000 9.90 0.00 40.16 3.85
253 254 1.424638 AGGGTGTAATGGATCCCTCG 58.575 55.000 9.90 0.00 46.22 4.63
254 255 1.062428 AGGGTGTAATGGATCCCTCGA 60.062 52.381 9.90 0.00 46.22 4.04
255 256 1.766496 GGGTGTAATGGATCCCTCGAA 59.234 52.381 9.90 0.00 37.18 3.71
256 257 2.224305 GGGTGTAATGGATCCCTCGAAG 60.224 54.545 9.90 0.00 37.18 3.79
257 258 2.484889 GTGTAATGGATCCCTCGAAGC 58.515 52.381 9.90 0.00 0.00 3.86
258 259 1.416401 TGTAATGGATCCCTCGAAGCC 59.584 52.381 9.90 0.00 0.00 4.35
259 260 1.056660 TAATGGATCCCTCGAAGCCC 58.943 55.000 9.90 0.00 0.00 5.19
260 261 0.988145 AATGGATCCCTCGAAGCCCA 60.988 55.000 9.90 0.00 0.00 5.36
261 262 1.414061 ATGGATCCCTCGAAGCCCAG 61.414 60.000 9.90 0.00 0.00 4.45
262 263 2.812619 GGATCCCTCGAAGCCCAGG 61.813 68.421 0.00 0.00 0.00 4.45
263 264 1.762460 GATCCCTCGAAGCCCAGGA 60.762 63.158 0.00 0.00 30.32 3.86
264 265 1.306997 ATCCCTCGAAGCCCAGGAA 60.307 57.895 0.00 0.00 30.32 3.36
265 266 1.341156 ATCCCTCGAAGCCCAGGAAG 61.341 60.000 0.00 0.00 30.32 3.46
266 267 2.294078 CCCTCGAAGCCCAGGAAGT 61.294 63.158 0.00 0.00 30.32 3.01
267 268 0.976073 CCCTCGAAGCCCAGGAAGTA 60.976 60.000 0.00 0.00 30.32 2.24
268 269 0.461961 CCTCGAAGCCCAGGAAGTAG 59.538 60.000 0.00 0.00 30.32 2.57
269 270 1.475403 CTCGAAGCCCAGGAAGTAGA 58.525 55.000 0.00 0.00 0.00 2.59
270 271 1.825474 CTCGAAGCCCAGGAAGTAGAA 59.175 52.381 0.00 0.00 0.00 2.10
271 272 2.432510 CTCGAAGCCCAGGAAGTAGAAT 59.567 50.000 0.00 0.00 0.00 2.40
272 273 2.168521 TCGAAGCCCAGGAAGTAGAATG 59.831 50.000 0.00 0.00 0.00 2.67
273 274 2.743183 CGAAGCCCAGGAAGTAGAATGG 60.743 54.545 0.00 0.00 0.00 3.16
275 276 3.808984 CCCAGGAAGTAGAATGGGC 57.191 57.895 0.00 0.00 45.62 5.36
276 277 1.216990 CCCAGGAAGTAGAATGGGCT 58.783 55.000 0.00 0.00 45.62 5.19
277 278 1.133976 CCCAGGAAGTAGAATGGGCTG 60.134 57.143 0.00 0.00 45.62 4.85
278 279 1.133976 CCAGGAAGTAGAATGGGCTGG 60.134 57.143 0.00 0.00 0.00 4.85
279 280 0.548510 AGGAAGTAGAATGGGCTGGC 59.451 55.000 0.00 0.00 0.00 4.85
280 281 0.815615 GGAAGTAGAATGGGCTGGCG 60.816 60.000 0.00 0.00 0.00 5.69
281 282 0.815615 GAAGTAGAATGGGCTGGCGG 60.816 60.000 0.00 0.00 0.00 6.13
282 283 1.271840 AAGTAGAATGGGCTGGCGGA 61.272 55.000 0.00 0.00 0.00 5.54
283 284 1.523938 GTAGAATGGGCTGGCGGAC 60.524 63.158 0.00 0.00 0.00 4.79
284 285 3.088941 TAGAATGGGCTGGCGGACG 62.089 63.158 0.00 0.00 0.00 4.79
285 286 4.467084 GAATGGGCTGGCGGACGA 62.467 66.667 0.00 0.00 0.00 4.20
286 287 4.473520 AATGGGCTGGCGGACGAG 62.474 66.667 0.00 0.00 0.00 4.18
295 296 2.263540 GCGGACGAGCCCAGTTTA 59.736 61.111 0.00 0.00 0.00 2.01
296 297 2.098831 GCGGACGAGCCCAGTTTAC 61.099 63.158 0.00 0.00 0.00 2.01
297 298 1.447314 CGGACGAGCCCAGTTTACC 60.447 63.158 0.00 0.00 0.00 2.85
298 299 1.675219 GGACGAGCCCAGTTTACCA 59.325 57.895 0.00 0.00 0.00 3.25
299 300 0.391263 GGACGAGCCCAGTTTACCAG 60.391 60.000 0.00 0.00 0.00 4.00
300 301 0.606604 GACGAGCCCAGTTTACCAGA 59.393 55.000 0.00 0.00 0.00 3.86
301 302 0.608640 ACGAGCCCAGTTTACCAGAG 59.391 55.000 0.00 0.00 0.00 3.35
302 303 0.108138 CGAGCCCAGTTTACCAGAGG 60.108 60.000 0.00 0.00 0.00 3.69
303 304 0.393132 GAGCCCAGTTTACCAGAGGC 60.393 60.000 0.00 0.00 40.79 4.70
304 305 1.378646 GCCCAGTTTACCAGAGGCC 60.379 63.158 0.00 0.00 34.23 5.19
305 306 1.078426 CCCAGTTTACCAGAGGCCG 60.078 63.158 0.00 0.00 0.00 6.13
306 307 1.677552 CCAGTTTACCAGAGGCCGT 59.322 57.895 0.00 0.00 0.00 5.68
307 308 0.391263 CCAGTTTACCAGAGGCCGTC 60.391 60.000 0.00 0.00 0.00 4.79
308 309 0.736325 CAGTTTACCAGAGGCCGTCG 60.736 60.000 0.00 0.00 0.00 5.12
309 310 1.183676 AGTTTACCAGAGGCCGTCGT 61.184 55.000 0.00 0.00 0.00 4.34
310 311 0.320160 GTTTACCAGAGGCCGTCGTT 60.320 55.000 0.00 0.00 0.00 3.85
311 312 0.393820 TTTACCAGAGGCCGTCGTTT 59.606 50.000 0.00 0.00 0.00 3.60
312 313 0.037975 TTACCAGAGGCCGTCGTTTC 60.038 55.000 0.00 0.00 0.00 2.78
313 314 2.203972 TACCAGAGGCCGTCGTTTCG 62.204 60.000 0.00 0.00 0.00 3.46
322 323 4.668118 GTCGTTTCGGCCCGTGGA 62.668 66.667 1.63 0.00 0.00 4.02
323 324 4.367023 TCGTTTCGGCCCGTGGAG 62.367 66.667 1.63 0.00 0.00 3.86
326 327 4.697756 TTTCGGCCCGTGGAGCAG 62.698 66.667 1.63 0.00 0.00 4.24
334 335 4.790962 CGTGGAGCAGCAGGCCAT 62.791 66.667 5.01 0.00 46.50 4.40
335 336 2.591753 GTGGAGCAGCAGGCCATA 59.408 61.111 5.01 0.00 46.50 2.74
336 337 1.525535 GTGGAGCAGCAGGCCATAG 60.526 63.158 5.01 0.00 46.50 2.23
337 338 2.112718 GGAGCAGCAGGCCATAGG 59.887 66.667 5.01 0.00 46.50 2.57
338 339 2.446848 GGAGCAGCAGGCCATAGGA 61.447 63.158 5.01 0.00 46.50 2.94
339 340 1.227793 GAGCAGCAGGCCATAGGAC 60.228 63.158 5.01 0.00 46.50 3.85
340 341 1.976132 GAGCAGCAGGCCATAGGACA 61.976 60.000 5.01 0.00 46.50 4.02
341 342 1.525535 GCAGCAGGCCATAGGACAG 60.526 63.158 5.01 0.00 36.11 3.51
342 343 1.525535 CAGCAGGCCATAGGACAGC 60.526 63.158 5.01 0.00 44.02 4.40
343 344 2.914289 GCAGGCCATAGGACAGCT 59.086 61.111 5.01 0.00 40.28 4.24
344 345 1.525535 GCAGGCCATAGGACAGCTG 60.526 63.158 13.48 13.48 40.28 4.24
345 346 1.147824 CAGGCCATAGGACAGCTGG 59.852 63.158 19.93 0.00 29.21 4.85
346 347 2.074948 AGGCCATAGGACAGCTGGG 61.075 63.158 19.93 9.42 29.21 4.45
347 348 2.203266 GCCATAGGACAGCTGGGC 60.203 66.667 19.93 15.90 0.00 5.36
348 349 2.512896 CCATAGGACAGCTGGGCC 59.487 66.667 19.93 18.50 0.00 5.80
349 350 2.377810 CCATAGGACAGCTGGGCCA 61.378 63.158 24.34 5.85 0.00 5.36
350 351 1.147824 CATAGGACAGCTGGGCCAG 59.852 63.158 29.44 29.44 34.12 4.85
351 352 1.003442 ATAGGACAGCTGGGCCAGA 59.997 57.895 37.07 14.73 32.44 3.86
352 353 0.621571 ATAGGACAGCTGGGCCAGAA 60.622 55.000 37.07 12.12 32.44 3.02
353 354 0.621571 TAGGACAGCTGGGCCAGAAT 60.622 55.000 37.07 21.23 32.44 2.40
354 355 1.000396 GGACAGCTGGGCCAGAATT 60.000 57.895 37.07 18.83 32.44 2.17
355 356 1.318158 GGACAGCTGGGCCAGAATTG 61.318 60.000 37.07 28.84 32.44 2.32
356 357 0.322816 GACAGCTGGGCCAGAATTGA 60.323 55.000 37.07 0.00 32.44 2.57
357 358 0.610232 ACAGCTGGGCCAGAATTGAC 60.610 55.000 37.07 17.67 32.44 3.18
358 359 0.609957 CAGCTGGGCCAGAATTGACA 60.610 55.000 37.07 0.00 32.44 3.58
359 360 0.610232 AGCTGGGCCAGAATTGACAC 60.610 55.000 37.07 16.15 32.44 3.67
360 361 0.895100 GCTGGGCCAGAATTGACACA 60.895 55.000 37.07 0.00 32.44 3.72
361 362 1.171308 CTGGGCCAGAATTGACACAG 58.829 55.000 29.96 0.00 32.44 3.66
362 363 0.478072 TGGGCCAGAATTGACACAGT 59.522 50.000 0.00 0.00 0.00 3.55
363 364 0.883833 GGGCCAGAATTGACACAGTG 59.116 55.000 4.39 0.00 0.00 3.66
364 365 0.242017 GGCCAGAATTGACACAGTGC 59.758 55.000 0.00 0.00 0.00 4.40
365 366 0.110056 GCCAGAATTGACACAGTGCG 60.110 55.000 0.00 0.00 0.00 5.34
366 367 0.518636 CCAGAATTGACACAGTGCGG 59.481 55.000 0.00 0.00 0.00 5.69
367 368 1.511850 CAGAATTGACACAGTGCGGA 58.488 50.000 0.00 0.00 0.00 5.54
368 369 1.872952 CAGAATTGACACAGTGCGGAA 59.127 47.619 0.00 0.00 0.00 4.30
369 370 1.873591 AGAATTGACACAGTGCGGAAC 59.126 47.619 0.00 0.00 0.00 3.62
370 371 1.601903 GAATTGACACAGTGCGGAACA 59.398 47.619 0.00 0.00 0.00 3.18
371 372 1.229428 ATTGACACAGTGCGGAACAG 58.771 50.000 0.00 0.00 0.00 3.16
372 373 0.176910 TTGACACAGTGCGGAACAGA 59.823 50.000 0.00 0.00 0.00 3.41
373 374 0.529773 TGACACAGTGCGGAACAGAC 60.530 55.000 0.00 0.00 0.00 3.51
374 375 0.249489 GACACAGTGCGGAACAGACT 60.249 55.000 0.00 0.00 0.00 3.24
375 376 0.530650 ACACAGTGCGGAACAGACTG 60.531 55.000 0.00 0.00 42.39 3.51
376 377 1.069765 ACAGTGCGGAACAGACTGG 59.930 57.895 7.51 0.00 41.23 4.00
377 378 1.069765 CAGTGCGGAACAGACTGGT 59.930 57.895 7.51 0.00 34.63 4.00
378 379 0.946221 CAGTGCGGAACAGACTGGTC 60.946 60.000 12.36 12.36 34.63 4.02
379 380 1.115930 AGTGCGGAACAGACTGGTCT 61.116 55.000 19.73 0.00 41.37 3.85
380 381 0.601558 GTGCGGAACAGACTGGTCTA 59.398 55.000 19.73 4.70 37.98 2.59
381 382 0.601558 TGCGGAACAGACTGGTCTAC 59.398 55.000 19.73 12.44 37.98 2.59
382 383 0.456312 GCGGAACAGACTGGTCTACG 60.456 60.000 19.73 16.06 37.98 3.51
383 384 0.879765 CGGAACAGACTGGTCTACGT 59.120 55.000 19.73 0.00 37.98 3.57
384 385 2.079158 CGGAACAGACTGGTCTACGTA 58.921 52.381 19.73 0.00 37.98 3.57
385 386 2.095532 CGGAACAGACTGGTCTACGTAG 59.904 54.545 19.73 16.73 37.98 3.51
386 387 3.341823 GGAACAGACTGGTCTACGTAGA 58.658 50.000 21.25 21.25 37.98 2.59
387 388 3.755378 GGAACAGACTGGTCTACGTAGAA 59.245 47.826 26.21 11.57 37.98 2.10
388 389 4.142643 GGAACAGACTGGTCTACGTAGAAG 60.143 50.000 26.21 21.87 37.98 2.85
389 390 4.283363 ACAGACTGGTCTACGTAGAAGA 57.717 45.455 26.21 14.54 37.98 2.87
390 391 4.846040 ACAGACTGGTCTACGTAGAAGAT 58.154 43.478 26.21 12.49 37.98 2.40
391 392 4.877251 ACAGACTGGTCTACGTAGAAGATC 59.123 45.833 26.21 19.40 37.98 2.75
392 393 5.120399 CAGACTGGTCTACGTAGAAGATCT 58.880 45.833 26.21 21.04 37.98 2.75
393 394 5.007234 CAGACTGGTCTACGTAGAAGATCTG 59.993 48.000 26.21 26.34 37.98 2.90
394 395 5.100344 ACTGGTCTACGTAGAAGATCTGA 57.900 43.478 26.21 0.00 33.47 3.27
395 396 4.877251 ACTGGTCTACGTAGAAGATCTGAC 59.123 45.833 26.21 12.15 33.47 3.51
396 397 3.869832 TGGTCTACGTAGAAGATCTGACG 59.130 47.826 26.21 18.45 41.02 4.35
397 398 3.248125 GGTCTACGTAGAAGATCTGACGG 59.752 52.174 26.21 10.56 39.57 4.79
398 399 2.871022 TCTACGTAGAAGATCTGACGGC 59.129 50.000 22.74 7.87 39.57 5.68
399 400 0.739561 ACGTAGAAGATCTGACGGCC 59.260 55.000 21.97 0.00 39.57 6.13
400 401 0.738975 CGTAGAAGATCTGACGGCCA 59.261 55.000 2.24 0.00 0.00 5.36
401 402 1.268794 CGTAGAAGATCTGACGGCCAG 60.269 57.143 2.24 0.00 44.27 4.85
408 409 4.779475 CTGACGGCCAGAAACAGT 57.221 55.556 2.24 0.00 45.78 3.55
409 410 2.533318 CTGACGGCCAGAAACAGTC 58.467 57.895 2.24 0.00 45.78 3.51
410 411 0.951040 CTGACGGCCAGAAACAGTCC 60.951 60.000 2.24 0.00 45.78 3.85
411 412 1.070786 GACGGCCAGAAACAGTCCA 59.929 57.895 2.24 0.00 0.00 4.02
412 413 0.534203 GACGGCCAGAAACAGTCCAA 60.534 55.000 2.24 0.00 0.00 3.53
413 414 0.110486 ACGGCCAGAAACAGTCCAAT 59.890 50.000 2.24 0.00 0.00 3.16
414 415 0.804989 CGGCCAGAAACAGTCCAATC 59.195 55.000 2.24 0.00 0.00 2.67
415 416 1.881925 CGGCCAGAAACAGTCCAATCA 60.882 52.381 2.24 0.00 0.00 2.57
416 417 1.541588 GGCCAGAAACAGTCCAATCAC 59.458 52.381 0.00 0.00 0.00 3.06
417 418 2.229792 GCCAGAAACAGTCCAATCACA 58.770 47.619 0.00 0.00 0.00 3.58
418 419 2.622942 GCCAGAAACAGTCCAATCACAA 59.377 45.455 0.00 0.00 0.00 3.33
419 420 3.068024 GCCAGAAACAGTCCAATCACAAA 59.932 43.478 0.00 0.00 0.00 2.83
420 421 4.441356 GCCAGAAACAGTCCAATCACAAAA 60.441 41.667 0.00 0.00 0.00 2.44
421 422 5.659463 CCAGAAACAGTCCAATCACAAAAA 58.341 37.500 0.00 0.00 0.00 1.94
422 423 5.519927 CCAGAAACAGTCCAATCACAAAAAC 59.480 40.000 0.00 0.00 0.00 2.43
423 424 5.229887 CAGAAACAGTCCAATCACAAAAACG 59.770 40.000 0.00 0.00 0.00 3.60
424 425 3.708563 ACAGTCCAATCACAAAAACGG 57.291 42.857 0.00 0.00 0.00 4.44
425 426 3.283751 ACAGTCCAATCACAAAAACGGA 58.716 40.909 0.00 0.00 0.00 4.69
426 427 3.066203 ACAGTCCAATCACAAAAACGGAC 59.934 43.478 0.00 0.00 42.64 4.79
427 428 3.066064 CAGTCCAATCACAAAAACGGACA 59.934 43.478 8.92 0.00 44.34 4.02
428 429 3.315191 AGTCCAATCACAAAAACGGACAG 59.685 43.478 8.92 0.00 44.34 3.51
429 430 2.034053 TCCAATCACAAAAACGGACAGC 59.966 45.455 0.00 0.00 0.00 4.40
430 431 2.034558 CCAATCACAAAAACGGACAGCT 59.965 45.455 0.00 0.00 0.00 4.24
431 432 3.044986 CAATCACAAAAACGGACAGCTG 58.955 45.455 13.48 13.48 0.00 4.24
432 433 1.745232 TCACAAAAACGGACAGCTGT 58.255 45.000 21.88 21.88 34.29 4.40
433 434 2.907634 TCACAAAAACGGACAGCTGTA 58.092 42.857 21.73 0.00 32.01 2.74
434 435 3.271729 TCACAAAAACGGACAGCTGTAA 58.728 40.909 21.73 0.00 32.01 2.41
435 436 3.690139 TCACAAAAACGGACAGCTGTAAA 59.310 39.130 21.73 0.00 32.01 2.01
436 437 3.789224 CACAAAAACGGACAGCTGTAAAC 59.211 43.478 21.73 12.30 32.01 2.01
437 438 3.033185 CAAAAACGGACAGCTGTAAACG 58.967 45.455 26.58 26.58 32.01 3.60
438 439 0.584876 AAACGGACAGCTGTAAACGC 59.415 50.000 27.54 14.13 32.01 4.84
439 440 0.531090 AACGGACAGCTGTAAACGCA 60.531 50.000 27.54 0.00 32.01 5.24
440 441 0.531090 ACGGACAGCTGTAAACGCAA 60.531 50.000 27.54 0.00 0.00 4.85
441 442 0.584396 CGGACAGCTGTAAACGCAAA 59.416 50.000 21.73 0.00 0.00 3.68
442 443 1.196808 CGGACAGCTGTAAACGCAAAT 59.803 47.619 21.73 0.00 0.00 2.32
443 444 2.724839 CGGACAGCTGTAAACGCAAATC 60.725 50.000 21.73 2.54 0.00 2.17
444 445 2.495939 GACAGCTGTAAACGCAAATCG 58.504 47.619 21.73 0.00 45.38 3.34
445 446 1.250476 CAGCTGTAAACGCAAATCGC 58.750 50.000 5.25 0.00 43.23 4.58
446 447 1.135972 CAGCTGTAAACGCAAATCGCT 60.136 47.619 5.25 0.00 43.23 4.93
447 448 1.135972 AGCTGTAAACGCAAATCGCTG 60.136 47.619 0.00 0.00 43.23 5.18
448 449 1.399727 GCTGTAAACGCAAATCGCTGT 60.400 47.619 0.00 0.00 43.23 4.40
449 450 2.233355 CTGTAAACGCAAATCGCTGTG 58.767 47.619 0.00 0.00 43.23 3.66
450 451 1.867865 TGTAAACGCAAATCGCTGTGA 59.132 42.857 0.00 0.00 43.23 3.58
451 452 2.096466 TGTAAACGCAAATCGCTGTGAG 60.096 45.455 0.00 0.00 43.23 3.51
452 453 0.238289 AAACGCAAATCGCTGTGAGG 59.762 50.000 0.00 0.00 43.23 3.86
453 454 1.577328 AACGCAAATCGCTGTGAGGG 61.577 55.000 0.00 0.00 43.23 4.30
454 455 2.486966 GCAAATCGCTGTGAGGGC 59.513 61.111 0.00 0.00 37.77 5.19
455 456 2.334946 GCAAATCGCTGTGAGGGCA 61.335 57.895 0.00 0.00 37.77 5.36
456 457 1.798735 CAAATCGCTGTGAGGGCAG 59.201 57.895 0.00 0.00 39.37 4.85
457 458 1.377725 AAATCGCTGTGAGGGCAGG 60.378 57.895 0.00 0.00 37.00 4.85
458 459 1.841302 AAATCGCTGTGAGGGCAGGA 61.841 55.000 0.00 0.00 37.00 3.86
459 460 1.841302 AATCGCTGTGAGGGCAGGAA 61.841 55.000 0.00 0.00 37.00 3.36
460 461 1.630126 ATCGCTGTGAGGGCAGGAAT 61.630 55.000 0.00 0.00 37.00 3.01
461 462 1.377725 CGCTGTGAGGGCAGGAATT 60.378 57.895 0.00 0.00 37.00 2.17
462 463 0.107703 CGCTGTGAGGGCAGGAATTA 60.108 55.000 0.00 0.00 37.00 1.40
463 464 1.673168 GCTGTGAGGGCAGGAATTAG 58.327 55.000 0.00 0.00 37.00 1.73
464 465 1.748591 GCTGTGAGGGCAGGAATTAGG 60.749 57.143 0.00 0.00 37.00 2.69
465 466 1.561542 CTGTGAGGGCAGGAATTAGGT 59.438 52.381 0.00 0.00 33.11 3.08
466 467 1.281867 TGTGAGGGCAGGAATTAGGTG 59.718 52.381 0.00 0.00 0.00 4.00
467 468 0.255890 TGAGGGCAGGAATTAGGTGC 59.744 55.000 0.00 0.00 36.42 5.01
468 469 0.815615 GAGGGCAGGAATTAGGTGCG 60.816 60.000 0.00 0.00 38.13 5.34
469 470 1.823899 GGGCAGGAATTAGGTGCGG 60.824 63.158 0.00 0.00 38.13 5.69
470 471 1.077716 GGCAGGAATTAGGTGCGGT 60.078 57.895 0.00 0.00 38.13 5.68
471 472 0.679960 GGCAGGAATTAGGTGCGGTT 60.680 55.000 0.00 0.00 38.13 4.44
472 473 1.407712 GGCAGGAATTAGGTGCGGTTA 60.408 52.381 0.00 0.00 38.13 2.85
473 474 2.572290 GCAGGAATTAGGTGCGGTTAT 58.428 47.619 0.00 0.00 0.00 1.89
474 475 3.495453 GGCAGGAATTAGGTGCGGTTATA 60.495 47.826 0.00 0.00 38.13 0.98
475 476 3.497262 GCAGGAATTAGGTGCGGTTATAC 59.503 47.826 0.00 0.00 0.00 1.47
476 477 4.742743 GCAGGAATTAGGTGCGGTTATACT 60.743 45.833 0.00 0.00 0.00 2.12
477 478 4.750098 CAGGAATTAGGTGCGGTTATACTG 59.250 45.833 0.00 0.00 0.00 2.74
478 479 4.407945 AGGAATTAGGTGCGGTTATACTGT 59.592 41.667 0.00 0.00 0.00 3.55
479 480 4.748600 GGAATTAGGTGCGGTTATACTGTC 59.251 45.833 0.00 0.00 0.00 3.51
480 481 3.806625 TTAGGTGCGGTTATACTGTCC 57.193 47.619 0.00 0.00 0.00 4.02
481 482 1.861982 AGGTGCGGTTATACTGTCCT 58.138 50.000 0.00 0.00 0.00 3.85
482 483 2.185387 AGGTGCGGTTATACTGTCCTT 58.815 47.619 0.00 0.00 30.98 3.36
483 484 3.368248 AGGTGCGGTTATACTGTCCTTA 58.632 45.455 0.00 0.00 30.98 2.69
500 501 6.119536 TGTCCTTAATTGCGTATCAGGAATT 58.880 36.000 2.40 2.40 43.07 2.17
506 507 3.459232 TGCGTATCAGGAATTCAGGAG 57.541 47.619 7.93 0.00 0.00 3.69
508 509 2.548920 GCGTATCAGGAATTCAGGAGGG 60.549 54.545 7.93 0.00 0.00 4.30
510 511 3.388024 CGTATCAGGAATTCAGGAGGGAA 59.612 47.826 7.93 0.00 0.00 3.97
551 555 1.153939 CTGACGGAGAGCAACTCGG 60.154 63.158 13.72 13.72 45.76 4.63
566 570 4.043168 CGGCAACCGTCTTCACTT 57.957 55.556 0.00 0.00 42.73 3.16
568 572 1.841663 CGGCAACCGTCTTCACTTGG 61.842 60.000 0.00 0.00 42.73 3.61
597 601 2.061773 CACGCTCTGTTCATCGAAAGT 58.938 47.619 0.00 0.00 0.00 2.66
600 604 2.343843 CGCTCTGTTCATCGAAAGTGAG 59.656 50.000 0.00 0.00 0.00 3.51
621 629 1.883084 GGAAGATGCTGCCGTACGG 60.883 63.158 30.06 30.06 38.57 4.02
623 631 3.385749 AAGATGCTGCCGTACGGGG 62.386 63.158 33.98 11.81 35.78 5.73
642 655 1.443194 CCGCACTGCACTGCATTTC 60.443 57.895 16.94 0.00 38.13 2.17
652 665 0.331278 ACTGCATTTCCCCCGATGAA 59.669 50.000 0.00 0.00 0.00 2.57
670 683 2.518836 AAAGCGAGATTGCTGCGTGC 62.519 55.000 0.00 0.00 46.60 5.34
671 684 4.858200 GCGAGATTGCTGCGTGCG 62.858 66.667 0.00 0.00 46.63 5.34
700 970 1.889105 CAGGTTGATGCCCGATCGG 60.889 63.158 27.65 27.65 33.17 4.18
772 1042 4.505217 GCGACCGCGACTTGCATG 62.505 66.667 8.23 0.00 46.97 4.06
773 1043 4.505217 CGACCGCGACTTGCATGC 62.505 66.667 11.82 11.82 46.97 4.06
774 1044 4.166011 GACCGCGACTTGCATGCC 62.166 66.667 16.68 0.00 46.97 4.40
778 1048 3.737172 GCGACTTGCATGCCGGTT 61.737 61.111 16.68 0.00 45.45 4.44
779 1049 2.395360 GCGACTTGCATGCCGGTTA 61.395 57.895 16.68 0.00 45.45 2.85
780 1050 1.715585 CGACTTGCATGCCGGTTAG 59.284 57.895 16.68 7.23 0.00 2.34
781 1051 1.429423 GACTTGCATGCCGGTTAGC 59.571 57.895 16.68 5.15 0.00 3.09
876 1161 1.827394 GTCCCAGCCAGGCGTATTA 59.173 57.895 5.55 0.00 35.39 0.98
883 1168 1.831736 AGCCAGGCGTATTACAGAGTT 59.168 47.619 5.55 0.00 0.00 3.01
980 1273 1.312815 CCTTCCATTCCAATCGAGCC 58.687 55.000 0.00 0.00 0.00 4.70
982 1275 0.539518 TTCCATTCCAATCGAGCCGA 59.460 50.000 0.00 0.00 41.13 5.54
983 1276 0.179084 TCCATTCCAATCGAGCCGAC 60.179 55.000 0.00 0.00 39.18 4.79
1113 1413 1.755008 CTCCTCCTCCACCGTCTCC 60.755 68.421 0.00 0.00 0.00 3.71
1116 1416 2.675423 TCCTCCACCGTCTCCACG 60.675 66.667 0.00 0.00 46.29 4.94
1205 1505 3.554692 GACGTCGAATGCCGCCTG 61.555 66.667 0.00 0.00 38.37 4.85
1308 1608 4.760047 GTGGTGGACGGCTCGCAT 62.760 66.667 0.00 0.00 0.00 4.73
1311 1611 4.760047 GTGGACGGCTCGCATGGT 62.760 66.667 0.00 0.00 0.00 3.55
1629 1929 0.823769 TCTGGATAGAGCACGCCGAT 60.824 55.000 0.00 0.00 0.00 4.18
2258 2558 2.750637 GCAGGGAGGAGACGACGA 60.751 66.667 0.00 0.00 0.00 4.20
2261 2561 3.507009 GGGAGGAGACGACGACGG 61.507 72.222 12.58 0.00 44.46 4.79
2327 2633 3.998672 GGTCTGGTCGTTGCGGGA 61.999 66.667 0.00 0.00 0.00 5.14
2378 2684 4.214545 TGCTACGATTTTTGACGTTGGAAT 59.785 37.500 0.00 0.00 42.61 3.01
2379 2685 5.151389 GCTACGATTTTTGACGTTGGAATT 58.849 37.500 0.00 0.00 42.61 2.17
2382 2688 4.742659 ACGATTTTTGACGTTGGAATTTGG 59.257 37.500 0.00 0.00 39.75 3.28
2383 2689 4.979197 CGATTTTTGACGTTGGAATTTGGA 59.021 37.500 0.00 0.00 0.00 3.53
2384 2690 5.460419 CGATTTTTGACGTTGGAATTTGGAA 59.540 36.000 0.00 0.00 0.00 3.53
2385 2691 6.019479 CGATTTTTGACGTTGGAATTTGGAAA 60.019 34.615 0.00 0.00 0.00 3.13
2386 2692 6.654793 TTTTTGACGTTGGAATTTGGAAAG 57.345 33.333 0.00 0.00 0.00 2.62
2387 2693 4.993029 TTGACGTTGGAATTTGGAAAGT 57.007 36.364 0.00 0.00 0.00 2.66
2388 2694 4.300189 TGACGTTGGAATTTGGAAAGTG 57.700 40.909 0.00 0.00 0.00 3.16
2389 2695 3.049912 GACGTTGGAATTTGGAAAGTGC 58.950 45.455 0.00 0.00 0.00 4.40
2390 2696 2.050691 CGTTGGAATTTGGAAAGTGCG 58.949 47.619 0.00 0.00 0.00 5.34
2429 2735 9.022884 TGATCTGATCTTGATAGTTGAGATAGG 57.977 37.037 17.82 0.00 30.64 2.57
2532 2839 1.179152 TCCAATGCACATTGCCTGAG 58.821 50.000 16.25 4.47 44.23 3.35
2539 2846 3.689347 TGCACATTGCCTGAGACTTATT 58.311 40.909 0.00 0.00 44.23 1.40
2604 2920 6.590292 TGTAAATCTCAATCGAACCAAGTCTC 59.410 38.462 0.00 0.00 0.00 3.36
2623 2939 6.619744 AGTCTCAGTCGATGCTATATTCATG 58.380 40.000 0.00 0.00 0.00 3.07
2632 2948 6.312180 TCGATGCTATATTCATGAGATGTTGC 59.688 38.462 0.00 5.12 0.00 4.17
2636 2952 5.406477 GCTATATTCATGAGATGTTGCGTGA 59.594 40.000 0.00 0.00 0.00 4.35
2642 2958 4.696877 TCATGAGATGTTGCGTGAAGATTT 59.303 37.500 0.00 0.00 0.00 2.17
2643 2959 5.874261 TCATGAGATGTTGCGTGAAGATTTA 59.126 36.000 0.00 0.00 0.00 1.40
2650 2966 5.284864 TGTTGCGTGAAGATTTATGCAAAA 58.715 33.333 15.82 9.94 46.65 2.44
2651 2967 5.750547 TGTTGCGTGAAGATTTATGCAAAAA 59.249 32.000 15.82 7.39 46.65 1.94
2715 3032 6.684538 AGACTTAGTTATATCCCAGTGGACT 58.315 40.000 11.95 7.48 45.58 3.85
2718 3035 6.901300 ACTTAGTTATATCCCAGTGGACTGAA 59.099 38.462 11.95 0.00 45.58 3.02
2721 3038 5.726793 AGTTATATCCCAGTGGACTGAAACT 59.273 40.000 11.95 11.49 45.58 2.66
2724 3041 4.993705 ATCCCAGTGGACTGAAACTTAA 57.006 40.909 11.95 0.00 45.58 1.85
2730 3047 4.035208 CAGTGGACTGAAACTTAACCACAC 59.965 45.833 14.87 0.00 46.59 3.82
2731 3048 3.942748 GTGGACTGAAACTTAACCACACA 59.057 43.478 0.00 0.00 44.58 3.72
2739 3056 5.357596 TGAAACTTAACCACACACTTTACCC 59.642 40.000 0.00 0.00 0.00 3.69
2748 3065 4.700213 CCACACACTTTACCCTAAGATTGG 59.300 45.833 0.00 0.00 0.00 3.16
2752 3069 4.202524 ACACTTTACCCTAAGATTGGCACA 60.203 41.667 0.00 0.00 0.00 4.57
2767 3084 2.885972 TGGCACAAAGGTTCTCAACCAA 60.886 45.455 8.14 0.00 46.35 3.67
2812 3129 8.519799 AAAATAAGAGAAAACAAGTCACCTCA 57.480 30.769 0.00 0.00 0.00 3.86
2814 3131 8.519799 AATAAGAGAAAACAAGTCACCTCAAA 57.480 30.769 0.00 0.00 0.00 2.69
2815 3132 6.442513 AAGAGAAAACAAGTCACCTCAAAG 57.557 37.500 0.00 0.00 0.00 2.77
2817 3134 6.360618 AGAGAAAACAAGTCACCTCAAAGAT 58.639 36.000 0.00 0.00 0.00 2.40
2818 3135 6.830838 AGAGAAAACAAGTCACCTCAAAGATT 59.169 34.615 0.00 0.00 0.00 2.40
2819 3136 6.799512 AGAAAACAAGTCACCTCAAAGATTG 58.200 36.000 0.00 0.00 0.00 2.67
2820 3137 5.520376 AAACAAGTCACCTCAAAGATTGG 57.480 39.130 0.00 0.00 0.00 3.16
2824 3143 0.039618 TCACCTCAAAGATTGGCCCC 59.960 55.000 0.00 0.00 0.00 5.80
2849 3168 2.032681 GGTTCTCCTTGTGCGGCT 59.967 61.111 0.00 0.00 0.00 5.52
2850 3169 1.600916 GGTTCTCCTTGTGCGGCTT 60.601 57.895 0.00 0.00 0.00 4.35
2855 3174 4.093952 CCTTGTGCGGCTTCAGCG 62.094 66.667 0.00 0.00 43.26 5.18
2863 3182 2.663188 GGCTTCAGCGGGCTATCG 60.663 66.667 0.00 0.00 43.26 2.92
2876 3195 2.383855 GGCTATCGGGAGCTCATATCT 58.616 52.381 17.19 0.00 42.43 1.98
3305 3624 4.674623 CGAAAGCGTAGGATACACAAGTCT 60.675 45.833 0.00 0.00 43.24 3.24
3310 3629 3.430374 CGTAGGATACACAAGTCTTGGGG 60.430 52.174 18.99 11.59 43.24 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.423154 GAGAACCCGTTGCCGCTG 61.423 66.667 0.00 0.00 0.00 5.18
4 5 2.748058 AATGAGAACCCGTTGCCGCT 62.748 55.000 0.00 0.00 0.00 5.52
5 6 1.022451 TAATGAGAACCCGTTGCCGC 61.022 55.000 0.00 0.00 0.00 6.53
6 7 0.725117 GTAATGAGAACCCGTTGCCG 59.275 55.000 0.00 0.00 0.00 5.69
7 8 1.092348 GGTAATGAGAACCCGTTGCC 58.908 55.000 0.00 0.00 32.23 4.52
8 9 0.725117 CGGTAATGAGAACCCGTTGC 59.275 55.000 0.00 0.00 35.78 4.17
9 10 2.373540 TCGGTAATGAGAACCCGTTG 57.626 50.000 0.00 0.00 41.17 4.10
10 11 3.055675 TCAATCGGTAATGAGAACCCGTT 60.056 43.478 0.00 0.00 41.17 4.44
11 12 2.498481 TCAATCGGTAATGAGAACCCGT 59.502 45.455 0.00 0.00 41.17 5.28
12 13 3.123804 CTCAATCGGTAATGAGAACCCG 58.876 50.000 0.00 0.00 44.64 5.28
13 14 4.402056 TCTCAATCGGTAATGAGAACCC 57.598 45.455 0.00 0.00 46.67 4.11
18 19 4.576463 CCCCTTTTCTCAATCGGTAATGAG 59.424 45.833 0.00 0.00 43.51 2.90
19 20 4.523083 CCCCTTTTCTCAATCGGTAATGA 58.477 43.478 0.00 0.00 0.00 2.57
20 21 3.066760 GCCCCTTTTCTCAATCGGTAATG 59.933 47.826 0.00 0.00 0.00 1.90
21 22 3.288092 GCCCCTTTTCTCAATCGGTAAT 58.712 45.455 0.00 0.00 0.00 1.89
22 23 2.040545 TGCCCCTTTTCTCAATCGGTAA 59.959 45.455 0.00 0.00 0.00 2.85
23 24 1.631388 TGCCCCTTTTCTCAATCGGTA 59.369 47.619 0.00 0.00 0.00 4.02
24 25 0.404040 TGCCCCTTTTCTCAATCGGT 59.596 50.000 0.00 0.00 0.00 4.69
25 26 1.098050 CTGCCCCTTTTCTCAATCGG 58.902 55.000 0.00 0.00 0.00 4.18
26 27 1.470098 CACTGCCCCTTTTCTCAATCG 59.530 52.381 0.00 0.00 0.00 3.34
27 28 2.519013 ACACTGCCCCTTTTCTCAATC 58.481 47.619 0.00 0.00 0.00 2.67
28 29 2.629617 CAACACTGCCCCTTTTCTCAAT 59.370 45.455 0.00 0.00 0.00 2.57
29 30 2.031120 CAACACTGCCCCTTTTCTCAA 58.969 47.619 0.00 0.00 0.00 3.02
30 31 1.691196 CAACACTGCCCCTTTTCTCA 58.309 50.000 0.00 0.00 0.00 3.27
31 32 0.961753 CCAACACTGCCCCTTTTCTC 59.038 55.000 0.00 0.00 0.00 2.87
32 33 0.469892 CCCAACACTGCCCCTTTTCT 60.470 55.000 0.00 0.00 0.00 2.52
33 34 0.469144 TCCCAACACTGCCCCTTTTC 60.469 55.000 0.00 0.00 0.00 2.29
34 35 0.469892 CTCCCAACACTGCCCCTTTT 60.470 55.000 0.00 0.00 0.00 2.27
35 36 1.153756 CTCCCAACACTGCCCCTTT 59.846 57.895 0.00 0.00 0.00 3.11
36 37 1.360393 TTCTCCCAACACTGCCCCTT 61.360 55.000 0.00 0.00 0.00 3.95
37 38 1.774217 TTCTCCCAACACTGCCCCT 60.774 57.895 0.00 0.00 0.00 4.79
38 39 1.303643 CTTCTCCCAACACTGCCCC 60.304 63.158 0.00 0.00 0.00 5.80
39 40 1.973812 GCTTCTCCCAACACTGCCC 60.974 63.158 0.00 0.00 0.00 5.36
40 41 0.610232 ATGCTTCTCCCAACACTGCC 60.610 55.000 0.00 0.00 0.00 4.85
41 42 1.740025 GTATGCTTCTCCCAACACTGC 59.260 52.381 0.00 0.00 0.00 4.40
42 43 2.002586 CGTATGCTTCTCCCAACACTG 58.997 52.381 0.00 0.00 0.00 3.66
43 44 1.676014 GCGTATGCTTCTCCCAACACT 60.676 52.381 0.00 0.00 38.39 3.55
44 45 0.727398 GCGTATGCTTCTCCCAACAC 59.273 55.000 0.00 0.00 38.39 3.32
45 46 0.392461 GGCGTATGCTTCTCCCAACA 60.392 55.000 6.92 0.00 42.25 3.33
46 47 1.429148 CGGCGTATGCTTCTCCCAAC 61.429 60.000 6.92 0.00 42.25 3.77
47 48 1.153449 CGGCGTATGCTTCTCCCAA 60.153 57.895 6.92 0.00 42.25 4.12
48 49 2.292794 GACGGCGTATGCTTCTCCCA 62.293 60.000 14.74 0.00 42.25 4.37
49 50 1.591863 GACGGCGTATGCTTCTCCC 60.592 63.158 14.74 0.00 42.25 4.30
50 51 0.459585 TTGACGGCGTATGCTTCTCC 60.460 55.000 14.74 0.00 42.25 3.71
51 52 0.924090 CTTGACGGCGTATGCTTCTC 59.076 55.000 14.74 0.00 42.25 2.87
52 53 0.460284 CCTTGACGGCGTATGCTTCT 60.460 55.000 14.74 0.00 42.25 2.85
53 54 0.739813 ACCTTGACGGCGTATGCTTC 60.740 55.000 14.74 0.00 42.25 3.86
54 55 1.019278 CACCTTGACGGCGTATGCTT 61.019 55.000 14.74 0.00 42.25 3.91
55 56 1.447838 CACCTTGACGGCGTATGCT 60.448 57.895 14.74 0.00 42.25 3.79
56 57 2.461110 CCACCTTGACGGCGTATGC 61.461 63.158 14.74 0.18 41.71 3.14
57 58 0.179084 ATCCACCTTGACGGCGTATG 60.179 55.000 14.74 5.93 35.61 2.39
58 59 0.179084 CATCCACCTTGACGGCGTAT 60.179 55.000 14.74 0.00 35.61 3.06
59 60 1.216977 CATCCACCTTGACGGCGTA 59.783 57.895 14.74 0.00 35.61 4.42
60 61 2.047274 CATCCACCTTGACGGCGT 60.047 61.111 14.65 14.65 35.61 5.68
61 62 2.100631 GTCATCCACCTTGACGGCG 61.101 63.158 4.80 4.80 34.67 6.46
62 63 1.745489 GGTCATCCACCTTGACGGC 60.745 63.158 0.00 0.00 43.53 5.68
63 64 4.617875 GGTCATCCACCTTGACGG 57.382 61.111 0.00 0.00 43.53 4.79
71 72 2.512515 GGCTCGCAGGTCATCCAC 60.513 66.667 0.00 0.00 35.89 4.02
72 73 4.147449 CGGCTCGCAGGTCATCCA 62.147 66.667 0.00 0.00 35.89 3.41
73 74 4.899239 CCGGCTCGCAGGTCATCC 62.899 72.222 0.00 0.00 0.00 3.51
74 75 4.148825 ACCGGCTCGCAGGTCATC 62.149 66.667 7.93 0.00 40.37 2.92
75 76 4.457496 CACCGGCTCGCAGGTCAT 62.457 66.667 10.79 0.00 42.40 3.06
101 102 2.978946 TTGGGCGGATCCAAGGTCC 61.979 63.158 13.41 7.21 41.44 4.46
102 103 2.674754 TTGGGCGGATCCAAGGTC 59.325 61.111 13.41 0.00 41.44 3.85
106 107 1.304052 CAACCTTGGGCGGATCCAA 60.304 57.895 13.41 0.00 43.82 3.53
107 108 2.196997 CTCAACCTTGGGCGGATCCA 62.197 60.000 13.41 0.00 36.21 3.41
108 109 1.452108 CTCAACCTTGGGCGGATCC 60.452 63.158 0.00 0.00 0.00 3.36
109 110 0.181350 ATCTCAACCTTGGGCGGATC 59.819 55.000 0.00 0.00 0.00 3.36
110 111 0.181350 GATCTCAACCTTGGGCGGAT 59.819 55.000 0.00 0.00 0.00 4.18
111 112 1.602237 GATCTCAACCTTGGGCGGA 59.398 57.895 0.00 0.00 0.00 5.54
112 113 1.815421 CGATCTCAACCTTGGGCGG 60.815 63.158 0.00 0.00 0.00 6.13
113 114 2.464459 GCGATCTCAACCTTGGGCG 61.464 63.158 0.00 0.00 0.00 6.13
114 115 2.115291 GGCGATCTCAACCTTGGGC 61.115 63.158 0.00 0.00 0.00 5.36
115 116 0.745845 CTGGCGATCTCAACCTTGGG 60.746 60.000 0.00 0.00 0.00 4.12
116 117 0.250234 TCTGGCGATCTCAACCTTGG 59.750 55.000 0.00 0.00 0.00 3.61
117 118 1.205655 TCTCTGGCGATCTCAACCTTG 59.794 52.381 0.00 0.00 0.00 3.61
118 119 1.480137 CTCTCTGGCGATCTCAACCTT 59.520 52.381 0.00 0.00 0.00 3.50
119 120 1.110442 CTCTCTGGCGATCTCAACCT 58.890 55.000 0.00 0.00 0.00 3.50
120 121 0.103937 CCTCTCTGGCGATCTCAACC 59.896 60.000 0.00 0.00 0.00 3.77
121 122 1.066908 CTCCTCTCTGGCGATCTCAAC 59.933 57.143 0.00 0.00 35.26 3.18
122 123 1.064389 TCTCCTCTCTGGCGATCTCAA 60.064 52.381 0.00 0.00 35.26 3.02
123 124 0.548510 TCTCCTCTCTGGCGATCTCA 59.451 55.000 0.00 0.00 35.26 3.27
124 125 1.238439 CTCTCCTCTCTGGCGATCTC 58.762 60.000 0.00 0.00 35.26 2.75
125 126 0.178992 CCTCTCCTCTCTGGCGATCT 60.179 60.000 0.00 0.00 35.26 2.75
126 127 0.467290 ACCTCTCCTCTCTGGCGATC 60.467 60.000 0.00 0.00 35.26 3.69
127 128 0.467290 GACCTCTCCTCTCTGGCGAT 60.467 60.000 0.00 0.00 35.26 4.58
128 129 1.077357 GACCTCTCCTCTCTGGCGA 60.077 63.158 0.00 0.00 35.26 5.54
129 130 2.477176 CGACCTCTCCTCTCTGGCG 61.477 68.421 0.00 0.00 35.26 5.69
130 131 2.124693 CCGACCTCTCCTCTCTGGC 61.125 68.421 0.00 0.00 35.26 4.85
131 132 2.124693 GCCGACCTCTCCTCTCTGG 61.125 68.421 0.00 0.00 37.10 3.86
132 133 1.379176 TGCCGACCTCTCCTCTCTG 60.379 63.158 0.00 0.00 0.00 3.35
133 134 1.077068 CTGCCGACCTCTCCTCTCT 60.077 63.158 0.00 0.00 0.00 3.10
134 135 2.124693 CCTGCCGACCTCTCCTCTC 61.125 68.421 0.00 0.00 0.00 3.20
135 136 2.043450 CCTGCCGACCTCTCCTCT 60.043 66.667 0.00 0.00 0.00 3.69
136 137 2.043852 TCCTGCCGACCTCTCCTC 60.044 66.667 0.00 0.00 0.00 3.71
137 138 1.572689 TAGTCCTGCCGACCTCTCCT 61.573 60.000 0.00 0.00 43.08 3.69
138 139 1.076923 TAGTCCTGCCGACCTCTCC 60.077 63.158 0.00 0.00 43.08 3.71
139 140 0.394625 AGTAGTCCTGCCGACCTCTC 60.395 60.000 0.00 0.00 43.08 3.20
140 141 0.039911 AAGTAGTCCTGCCGACCTCT 59.960 55.000 0.00 0.00 43.08 3.69
141 142 0.173708 CAAGTAGTCCTGCCGACCTC 59.826 60.000 0.00 0.00 43.08 3.85
142 143 1.258445 CCAAGTAGTCCTGCCGACCT 61.258 60.000 0.00 0.00 43.08 3.85
143 144 1.218316 CCAAGTAGTCCTGCCGACC 59.782 63.158 0.00 0.00 43.08 4.79
144 145 1.218316 CCCAAGTAGTCCTGCCGAC 59.782 63.158 0.00 0.00 42.32 4.79
145 146 0.970937 CTCCCAAGTAGTCCTGCCGA 60.971 60.000 0.00 0.00 0.00 5.54
146 147 1.517832 CTCCCAAGTAGTCCTGCCG 59.482 63.158 0.00 0.00 0.00 5.69
147 148 1.627297 CCCTCCCAAGTAGTCCTGCC 61.627 65.000 0.00 0.00 0.00 4.85
148 149 0.617820 TCCCTCCCAAGTAGTCCTGC 60.618 60.000 0.00 0.00 0.00 4.85
149 150 1.765314 CATCCCTCCCAAGTAGTCCTG 59.235 57.143 0.00 0.00 0.00 3.86
150 151 1.344496 CCATCCCTCCCAAGTAGTCCT 60.344 57.143 0.00 0.00 0.00 3.85
151 152 1.132500 CCATCCCTCCCAAGTAGTCC 58.868 60.000 0.00 0.00 0.00 3.85
152 153 1.132500 CCCATCCCTCCCAAGTAGTC 58.868 60.000 0.00 0.00 0.00 2.59
153 154 0.421904 ACCCATCCCTCCCAAGTAGT 59.578 55.000 0.00 0.00 0.00 2.73
154 155 1.132500 GACCCATCCCTCCCAAGTAG 58.868 60.000 0.00 0.00 0.00 2.57
155 156 0.327191 GGACCCATCCCTCCCAAGTA 60.327 60.000 0.00 0.00 39.39 2.24
156 157 1.619669 GGACCCATCCCTCCCAAGT 60.620 63.158 0.00 0.00 39.39 3.16
157 158 1.619363 TGGACCCATCCCTCCCAAG 60.619 63.158 0.00 0.00 45.59 3.61
158 159 1.928567 GTGGACCCATCCCTCCCAA 60.929 63.158 0.00 0.00 45.59 4.12
159 160 2.286121 GTGGACCCATCCCTCCCA 60.286 66.667 0.00 0.00 45.59 4.37
160 161 2.042930 AGTGGACCCATCCCTCCC 59.957 66.667 0.00 0.00 45.59 4.30
161 162 2.435693 CGAGTGGACCCATCCCTCC 61.436 68.421 0.00 0.00 45.59 4.30
162 163 1.677637 GACGAGTGGACCCATCCCTC 61.678 65.000 0.00 0.00 45.59 4.30
163 164 1.686110 GACGAGTGGACCCATCCCT 60.686 63.158 0.00 0.00 45.59 4.20
164 165 0.396695 TAGACGAGTGGACCCATCCC 60.397 60.000 0.00 0.00 45.59 3.85
165 166 1.614413 GATAGACGAGTGGACCCATCC 59.386 57.143 0.00 0.00 46.48 3.51
166 167 1.614413 GGATAGACGAGTGGACCCATC 59.386 57.143 0.00 0.00 0.00 3.51
167 168 1.705873 GGATAGACGAGTGGACCCAT 58.294 55.000 0.00 0.00 0.00 4.00
168 169 0.396695 GGGATAGACGAGTGGACCCA 60.397 60.000 0.00 0.00 36.27 4.51
169 170 1.114119 GGGGATAGACGAGTGGACCC 61.114 65.000 0.00 0.00 35.60 4.46
170 171 0.106116 AGGGGATAGACGAGTGGACC 60.106 60.000 0.00 0.00 0.00 4.46
171 172 1.320507 GAGGGGATAGACGAGTGGAC 58.679 60.000 0.00 0.00 0.00 4.02
172 173 0.179026 CGAGGGGATAGACGAGTGGA 60.179 60.000 0.00 0.00 0.00 4.02
173 174 1.797211 GCGAGGGGATAGACGAGTGG 61.797 65.000 0.00 0.00 0.00 4.00
174 175 1.655329 GCGAGGGGATAGACGAGTG 59.345 63.158 0.00 0.00 0.00 3.51
175 176 1.892862 CGCGAGGGGATAGACGAGT 60.893 63.158 0.00 0.00 0.00 4.18
176 177 1.445716 AACGCGAGGGGATAGACGAG 61.446 60.000 15.93 0.00 0.00 4.18
177 178 1.452651 AACGCGAGGGGATAGACGA 60.453 57.895 15.93 0.00 0.00 4.20
178 179 1.299165 CAACGCGAGGGGATAGACG 60.299 63.158 15.93 0.00 0.00 4.18
179 180 1.067582 CCAACGCGAGGGGATAGAC 59.932 63.158 15.93 0.00 32.12 2.59
180 181 0.469331 ATCCAACGCGAGGGGATAGA 60.469 55.000 22.61 5.64 44.32 1.98
181 182 0.038159 GATCCAACGCGAGGGGATAG 60.038 60.000 23.47 2.18 45.55 2.08
182 183 1.469335 GGATCCAACGCGAGGGGATA 61.469 60.000 23.47 7.25 45.55 2.59
184 185 3.467226 GGATCCAACGCGAGGGGA 61.467 66.667 15.93 16.94 41.81 4.81
185 186 4.547367 GGGATCCAACGCGAGGGG 62.547 72.222 15.93 11.41 0.00 4.79
186 187 4.547367 GGGGATCCAACGCGAGGG 62.547 72.222 15.93 14.33 0.00 4.30
187 188 3.447025 GAGGGGATCCAACGCGAGG 62.447 68.421 15.93 15.14 34.83 4.63
188 189 2.107141 GAGGGGATCCAACGCGAG 59.893 66.667 15.93 4.40 34.83 5.03
189 190 3.833645 CGAGGGGATCCAACGCGA 61.834 66.667 21.41 0.00 34.83 5.87
190 191 4.143333 ACGAGGGGATCCAACGCG 62.143 66.667 23.27 23.27 38.14 6.01
191 192 2.511600 CACGAGGGGATCCAACGC 60.512 66.667 15.23 6.72 38.14 4.84
192 193 2.186903 CCACGAGGGGATCCAACG 59.813 66.667 15.23 17.05 39.56 4.10
193 194 2.124695 GCCACGAGGGGATCCAAC 60.125 66.667 15.23 5.77 37.04 3.77
226 227 1.276989 TCCATTACACCCTCGTGGAAC 59.723 52.381 4.76 0.00 45.72 3.62
227 228 1.646912 TCCATTACACCCTCGTGGAA 58.353 50.000 4.76 0.00 46.94 3.53
228 229 1.760613 GATCCATTACACCCTCGTGGA 59.239 52.381 4.76 0.00 44.86 4.02
229 230 1.202651 GGATCCATTACACCCTCGTGG 60.203 57.143 6.95 0.00 44.86 4.94
230 231 1.202651 GGGATCCATTACACCCTCGTG 60.203 57.143 15.23 0.00 46.11 4.35
231 232 1.129058 GGGATCCATTACACCCTCGT 58.871 55.000 15.23 0.00 39.28 4.18
235 236 1.420430 TCGAGGGATCCATTACACCC 58.580 55.000 15.23 0.00 42.36 4.61
236 237 2.807108 GCTTCGAGGGATCCATTACACC 60.807 54.545 15.23 0.00 0.00 4.16
237 238 2.484889 GCTTCGAGGGATCCATTACAC 58.515 52.381 15.23 0.00 0.00 2.90
238 239 1.416401 GGCTTCGAGGGATCCATTACA 59.584 52.381 15.23 0.00 0.00 2.41
239 240 1.270893 GGGCTTCGAGGGATCCATTAC 60.271 57.143 15.23 0.00 0.00 1.89
240 241 1.056660 GGGCTTCGAGGGATCCATTA 58.943 55.000 15.23 0.00 0.00 1.90
241 242 0.988145 TGGGCTTCGAGGGATCCATT 60.988 55.000 15.23 0.00 0.00 3.16
242 243 1.384502 TGGGCTTCGAGGGATCCAT 60.385 57.895 15.23 6.26 0.00 3.41
243 244 2.040442 TGGGCTTCGAGGGATCCA 59.960 61.111 15.23 0.00 0.00 3.41
244 245 2.812619 CCTGGGCTTCGAGGGATCC 61.813 68.421 1.92 1.92 0.00 3.36
245 246 1.338136 TTCCTGGGCTTCGAGGGATC 61.338 60.000 0.00 0.00 0.00 3.36
246 247 1.306997 TTCCTGGGCTTCGAGGGAT 60.307 57.895 0.00 0.00 0.00 3.85
247 248 1.990060 CTTCCTGGGCTTCGAGGGA 60.990 63.158 0.00 0.00 0.00 4.20
248 249 0.976073 TACTTCCTGGGCTTCGAGGG 60.976 60.000 0.00 0.00 0.00 4.30
249 250 0.461961 CTACTTCCTGGGCTTCGAGG 59.538 60.000 0.00 0.00 0.00 4.63
250 251 1.475403 TCTACTTCCTGGGCTTCGAG 58.525 55.000 0.00 0.00 0.00 4.04
251 252 1.933021 TTCTACTTCCTGGGCTTCGA 58.067 50.000 0.00 0.00 0.00 3.71
252 253 2.555199 CATTCTACTTCCTGGGCTTCG 58.445 52.381 0.00 0.00 0.00 3.79
253 254 2.422093 CCCATTCTACTTCCTGGGCTTC 60.422 54.545 0.00 0.00 41.80 3.86
254 255 1.566231 CCCATTCTACTTCCTGGGCTT 59.434 52.381 0.00 0.00 41.80 4.35
255 256 1.216990 CCCATTCTACTTCCTGGGCT 58.783 55.000 0.00 0.00 41.80 5.19
256 257 3.808984 CCCATTCTACTTCCTGGGC 57.191 57.895 0.00 0.00 41.80 5.36
258 259 1.133976 CCAGCCCATTCTACTTCCTGG 60.134 57.143 0.00 0.00 33.27 4.45
259 260 1.748591 GCCAGCCCATTCTACTTCCTG 60.749 57.143 0.00 0.00 0.00 3.86
260 261 0.548510 GCCAGCCCATTCTACTTCCT 59.451 55.000 0.00 0.00 0.00 3.36
261 262 0.815615 CGCCAGCCCATTCTACTTCC 60.816 60.000 0.00 0.00 0.00 3.46
262 263 0.815615 CCGCCAGCCCATTCTACTTC 60.816 60.000 0.00 0.00 0.00 3.01
263 264 1.224592 CCGCCAGCCCATTCTACTT 59.775 57.895 0.00 0.00 0.00 2.24
264 265 1.689233 TCCGCCAGCCCATTCTACT 60.689 57.895 0.00 0.00 0.00 2.57
265 266 1.523938 GTCCGCCAGCCCATTCTAC 60.524 63.158 0.00 0.00 0.00 2.59
266 267 2.908015 GTCCGCCAGCCCATTCTA 59.092 61.111 0.00 0.00 0.00 2.10
267 268 4.473520 CGTCCGCCAGCCCATTCT 62.474 66.667 0.00 0.00 0.00 2.40
268 269 4.467084 TCGTCCGCCAGCCCATTC 62.467 66.667 0.00 0.00 0.00 2.67
269 270 4.473520 CTCGTCCGCCAGCCCATT 62.474 66.667 0.00 0.00 0.00 3.16
278 279 2.098831 GTAAACTGGGCTCGTCCGC 61.099 63.158 0.00 0.00 34.94 5.54
279 280 1.447314 GGTAAACTGGGCTCGTCCG 60.447 63.158 0.00 0.00 34.94 4.79
280 281 0.391263 CTGGTAAACTGGGCTCGTCC 60.391 60.000 0.00 0.00 0.00 4.79
281 282 0.606604 TCTGGTAAACTGGGCTCGTC 59.393 55.000 0.00 0.00 0.00 4.20
282 283 0.608640 CTCTGGTAAACTGGGCTCGT 59.391 55.000 0.00 0.00 0.00 4.18
283 284 0.108138 CCTCTGGTAAACTGGGCTCG 60.108 60.000 0.00 0.00 0.00 5.03
284 285 0.393132 GCCTCTGGTAAACTGGGCTC 60.393 60.000 0.00 0.00 36.96 4.70
285 286 1.685820 GCCTCTGGTAAACTGGGCT 59.314 57.895 0.00 0.00 36.96 5.19
286 287 1.378646 GGCCTCTGGTAAACTGGGC 60.379 63.158 0.00 0.00 38.92 5.36
287 288 1.078426 CGGCCTCTGGTAAACTGGG 60.078 63.158 0.00 0.00 0.00 4.45
288 289 0.391263 GACGGCCTCTGGTAAACTGG 60.391 60.000 0.00 0.00 0.00 4.00
289 290 0.736325 CGACGGCCTCTGGTAAACTG 60.736 60.000 0.00 0.00 0.00 3.16
290 291 1.183676 ACGACGGCCTCTGGTAAACT 61.184 55.000 0.00 0.00 0.00 2.66
291 292 0.320160 AACGACGGCCTCTGGTAAAC 60.320 55.000 0.00 0.00 0.00 2.01
292 293 0.393820 AAACGACGGCCTCTGGTAAA 59.606 50.000 0.00 0.00 0.00 2.01
293 294 0.037975 GAAACGACGGCCTCTGGTAA 60.038 55.000 0.00 0.00 0.00 2.85
294 295 1.588082 GAAACGACGGCCTCTGGTA 59.412 57.895 0.00 0.00 0.00 3.25
295 296 2.342648 GAAACGACGGCCTCTGGT 59.657 61.111 0.00 0.00 0.00 4.00
296 297 2.809601 CGAAACGACGGCCTCTGG 60.810 66.667 0.00 0.00 0.00 3.86
297 298 2.809601 CCGAAACGACGGCCTCTG 60.810 66.667 0.00 0.00 46.20 3.35
305 306 4.668118 TCCACGGGCCGAAACGAC 62.668 66.667 35.78 0.00 0.00 4.34
306 307 4.367023 CTCCACGGGCCGAAACGA 62.367 66.667 35.78 19.31 0.00 3.85
309 310 4.697756 CTGCTCCACGGGCCGAAA 62.698 66.667 35.78 15.97 0.00 3.46
317 318 3.390183 TATGGCCTGCTGCTCCACG 62.390 63.158 3.32 0.00 40.92 4.94
318 319 1.525535 CTATGGCCTGCTGCTCCAC 60.526 63.158 3.32 0.00 40.92 4.02
319 320 2.749584 CCTATGGCCTGCTGCTCCA 61.750 63.158 3.32 6.27 40.92 3.86
320 321 2.112718 CCTATGGCCTGCTGCTCC 59.887 66.667 3.32 0.10 40.92 4.70
321 322 1.227793 GTCCTATGGCCTGCTGCTC 60.228 63.158 3.32 0.00 40.92 4.26
322 323 1.980784 CTGTCCTATGGCCTGCTGCT 61.981 60.000 3.32 0.00 40.92 4.24
323 324 1.525535 CTGTCCTATGGCCTGCTGC 60.526 63.158 3.32 0.00 40.16 5.25
324 325 1.525535 GCTGTCCTATGGCCTGCTG 60.526 63.158 3.32 0.00 0.00 4.41
325 326 1.692042 AGCTGTCCTATGGCCTGCT 60.692 57.895 3.32 0.00 0.00 4.24
326 327 1.525535 CAGCTGTCCTATGGCCTGC 60.526 63.158 5.25 0.00 0.00 4.85
327 328 1.147824 CCAGCTGTCCTATGGCCTG 59.852 63.158 13.81 0.00 0.00 4.85
328 329 2.074948 CCCAGCTGTCCTATGGCCT 61.075 63.158 13.81 0.00 32.46 5.19
329 330 2.512896 CCCAGCTGTCCTATGGCC 59.487 66.667 13.81 0.00 32.46 5.36
330 331 2.203266 GCCCAGCTGTCCTATGGC 60.203 66.667 13.81 13.20 34.64 4.40
331 332 2.335092 CTGGCCCAGCTGTCCTATGG 62.335 65.000 13.81 6.52 0.00 2.74
332 333 1.147824 CTGGCCCAGCTGTCCTATG 59.852 63.158 13.81 4.88 0.00 2.23
333 334 0.621571 TTCTGGCCCAGCTGTCCTAT 60.622 55.000 13.81 0.00 0.00 2.57
334 335 0.621571 ATTCTGGCCCAGCTGTCCTA 60.622 55.000 13.81 0.00 0.00 2.94
335 336 1.504275 AATTCTGGCCCAGCTGTCCT 61.504 55.000 13.81 0.00 0.00 3.85
336 337 1.000396 AATTCTGGCCCAGCTGTCC 60.000 57.895 13.81 13.71 0.00 4.02
337 338 0.322816 TCAATTCTGGCCCAGCTGTC 60.323 55.000 13.81 3.71 0.00 3.51
338 339 0.610232 GTCAATTCTGGCCCAGCTGT 60.610 55.000 13.81 0.00 0.00 4.40
339 340 0.609957 TGTCAATTCTGGCCCAGCTG 60.610 55.000 5.66 6.78 0.00 4.24
340 341 0.610232 GTGTCAATTCTGGCCCAGCT 60.610 55.000 5.66 0.00 0.00 4.24
341 342 0.895100 TGTGTCAATTCTGGCCCAGC 60.895 55.000 5.66 0.00 0.00 4.85
342 343 1.171308 CTGTGTCAATTCTGGCCCAG 58.829 55.000 3.69 3.69 0.00 4.45
343 344 0.478072 ACTGTGTCAATTCTGGCCCA 59.522 50.000 0.00 0.00 0.00 5.36
344 345 0.883833 CACTGTGTCAATTCTGGCCC 59.116 55.000 0.00 0.00 0.00 5.80
345 346 0.242017 GCACTGTGTCAATTCTGGCC 59.758 55.000 9.86 0.00 0.00 5.36
346 347 0.110056 CGCACTGTGTCAATTCTGGC 60.110 55.000 9.86 0.00 0.00 4.85
347 348 0.518636 CCGCACTGTGTCAATTCTGG 59.481 55.000 9.86 0.00 0.00 3.86
348 349 1.511850 TCCGCACTGTGTCAATTCTG 58.488 50.000 9.86 0.00 0.00 3.02
349 350 1.873591 GTTCCGCACTGTGTCAATTCT 59.126 47.619 9.86 0.00 0.00 2.40
350 351 1.601903 TGTTCCGCACTGTGTCAATTC 59.398 47.619 9.86 0.00 0.00 2.17
351 352 1.603802 CTGTTCCGCACTGTGTCAATT 59.396 47.619 9.86 0.00 0.00 2.32
352 353 1.202639 TCTGTTCCGCACTGTGTCAAT 60.203 47.619 9.86 0.00 0.00 2.57
353 354 0.176910 TCTGTTCCGCACTGTGTCAA 59.823 50.000 9.86 0.00 0.00 3.18
354 355 0.529773 GTCTGTTCCGCACTGTGTCA 60.530 55.000 9.86 1.56 0.00 3.58
355 356 0.249489 AGTCTGTTCCGCACTGTGTC 60.249 55.000 9.86 1.09 0.00 3.67
356 357 0.530650 CAGTCTGTTCCGCACTGTGT 60.531 55.000 9.86 0.00 34.08 3.72
357 358 1.224069 CCAGTCTGTTCCGCACTGTG 61.224 60.000 2.76 2.76 36.57 3.66
358 359 1.069765 CCAGTCTGTTCCGCACTGT 59.930 57.895 0.00 0.00 36.57 3.55
359 360 0.946221 GACCAGTCTGTTCCGCACTG 60.946 60.000 0.00 0.00 37.81 3.66
360 361 1.115930 AGACCAGTCTGTTCCGCACT 61.116 55.000 0.00 0.00 38.75 4.40
361 362 0.601558 TAGACCAGTCTGTTCCGCAC 59.398 55.000 10.59 0.00 40.71 5.34
362 363 0.601558 GTAGACCAGTCTGTTCCGCA 59.398 55.000 10.59 0.00 40.71 5.69
363 364 0.456312 CGTAGACCAGTCTGTTCCGC 60.456 60.000 10.59 0.00 40.71 5.54
364 365 0.879765 ACGTAGACCAGTCTGTTCCG 59.120 55.000 10.59 9.31 40.71 4.30
365 366 3.341823 TCTACGTAGACCAGTCTGTTCC 58.658 50.000 21.25 0.00 40.71 3.62
366 367 4.694509 TCTTCTACGTAGACCAGTCTGTTC 59.305 45.833 24.60 0.00 40.71 3.18
367 368 4.649692 TCTTCTACGTAGACCAGTCTGTT 58.350 43.478 24.60 0.00 40.71 3.16
368 369 4.283363 TCTTCTACGTAGACCAGTCTGT 57.717 45.455 24.60 3.57 40.71 3.41
369 370 5.007234 CAGATCTTCTACGTAGACCAGTCTG 59.993 48.000 24.60 25.28 40.71 3.51
370 371 5.104859 TCAGATCTTCTACGTAGACCAGTCT 60.105 44.000 24.60 19.88 43.40 3.24
371 372 5.006941 GTCAGATCTTCTACGTAGACCAGTC 59.993 48.000 24.60 18.22 30.81 3.51
372 373 4.877251 GTCAGATCTTCTACGTAGACCAGT 59.123 45.833 24.60 11.15 30.81 4.00
373 374 4.025563 CGTCAGATCTTCTACGTAGACCAG 60.026 50.000 24.60 19.40 30.81 4.00
374 375 3.869832 CGTCAGATCTTCTACGTAGACCA 59.130 47.826 24.60 14.19 30.81 4.02
375 376 3.248125 CCGTCAGATCTTCTACGTAGACC 59.752 52.174 24.60 13.60 33.63 3.85
376 377 3.303263 GCCGTCAGATCTTCTACGTAGAC 60.303 52.174 24.60 13.20 33.63 2.59
377 378 2.871022 GCCGTCAGATCTTCTACGTAGA 59.129 50.000 21.25 21.25 33.63 2.59
378 379 2.031857 GGCCGTCAGATCTTCTACGTAG 60.032 54.545 16.73 16.73 33.63 3.51
379 380 1.945394 GGCCGTCAGATCTTCTACGTA 59.055 52.381 16.54 0.00 33.63 3.57
380 381 0.739561 GGCCGTCAGATCTTCTACGT 59.260 55.000 16.54 0.00 33.63 3.57
381 382 0.738975 TGGCCGTCAGATCTTCTACG 59.261 55.000 12.78 12.78 35.20 3.51
382 383 2.025155 TCTGGCCGTCAGATCTTCTAC 58.975 52.381 0.00 0.00 46.71 2.59
383 384 2.437085 TCTGGCCGTCAGATCTTCTA 57.563 50.000 0.00 0.00 46.71 2.10
384 385 3.289797 TCTGGCCGTCAGATCTTCT 57.710 52.632 0.00 0.00 46.71 2.85
391 392 0.951040 GGACTGTTTCTGGCCGTCAG 60.951 60.000 0.00 4.64 44.68 3.51
392 393 1.070786 GGACTGTTTCTGGCCGTCA 59.929 57.895 0.00 0.00 0.00 4.35
393 394 0.534203 TTGGACTGTTTCTGGCCGTC 60.534 55.000 0.00 0.00 32.81 4.79
394 395 0.110486 ATTGGACTGTTTCTGGCCGT 59.890 50.000 0.00 0.00 32.81 5.68
395 396 0.804989 GATTGGACTGTTTCTGGCCG 59.195 55.000 0.00 0.00 32.81 6.13
396 397 1.541588 GTGATTGGACTGTTTCTGGCC 59.458 52.381 0.00 0.00 0.00 5.36
397 398 2.229792 TGTGATTGGACTGTTTCTGGC 58.770 47.619 0.00 0.00 0.00 4.85
398 399 4.916983 TTTGTGATTGGACTGTTTCTGG 57.083 40.909 0.00 0.00 0.00 3.86
399 400 5.229887 CGTTTTTGTGATTGGACTGTTTCTG 59.770 40.000 0.00 0.00 0.00 3.02
400 401 5.339990 CGTTTTTGTGATTGGACTGTTTCT 58.660 37.500 0.00 0.00 0.00 2.52
401 402 4.502645 CCGTTTTTGTGATTGGACTGTTTC 59.497 41.667 0.00 0.00 0.00 2.78
402 403 4.158764 TCCGTTTTTGTGATTGGACTGTTT 59.841 37.500 0.00 0.00 0.00 2.83
403 404 3.697045 TCCGTTTTTGTGATTGGACTGTT 59.303 39.130 0.00 0.00 0.00 3.16
404 405 3.066203 GTCCGTTTTTGTGATTGGACTGT 59.934 43.478 2.09 0.00 42.00 3.55
405 406 3.066064 TGTCCGTTTTTGTGATTGGACTG 59.934 43.478 10.22 0.00 44.77 3.51
406 407 3.283751 TGTCCGTTTTTGTGATTGGACT 58.716 40.909 10.22 0.00 44.77 3.85
407 408 3.628017 CTGTCCGTTTTTGTGATTGGAC 58.372 45.455 2.34 2.34 44.75 4.02
408 409 2.034053 GCTGTCCGTTTTTGTGATTGGA 59.966 45.455 0.00 0.00 0.00 3.53
409 410 2.034558 AGCTGTCCGTTTTTGTGATTGG 59.965 45.455 0.00 0.00 0.00 3.16
410 411 3.044986 CAGCTGTCCGTTTTTGTGATTG 58.955 45.455 5.25 0.00 0.00 2.67
411 412 2.687935 ACAGCTGTCCGTTTTTGTGATT 59.312 40.909 15.25 0.00 0.00 2.57
412 413 2.297701 ACAGCTGTCCGTTTTTGTGAT 58.702 42.857 15.25 0.00 0.00 3.06
413 414 1.745232 ACAGCTGTCCGTTTTTGTGA 58.255 45.000 15.25 0.00 0.00 3.58
414 415 3.684103 TTACAGCTGTCCGTTTTTGTG 57.316 42.857 25.56 0.00 0.00 3.33
415 416 3.486209 CGTTTACAGCTGTCCGTTTTTGT 60.486 43.478 25.56 0.00 0.00 2.83
416 417 3.033185 CGTTTACAGCTGTCCGTTTTTG 58.967 45.455 25.56 2.58 0.00 2.44
417 418 2.540157 GCGTTTACAGCTGTCCGTTTTT 60.540 45.455 25.56 0.00 0.00 1.94
418 419 1.003223 GCGTTTACAGCTGTCCGTTTT 60.003 47.619 25.56 0.00 0.00 2.43
419 420 0.584876 GCGTTTACAGCTGTCCGTTT 59.415 50.000 25.56 0.00 0.00 3.60
420 421 0.531090 TGCGTTTACAGCTGTCCGTT 60.531 50.000 25.56 0.00 35.28 4.44
421 422 0.531090 TTGCGTTTACAGCTGTCCGT 60.531 50.000 25.56 0.09 35.28 4.69
422 423 0.584396 TTTGCGTTTACAGCTGTCCG 59.416 50.000 25.56 23.36 35.28 4.79
423 424 2.724839 CGATTTGCGTTTACAGCTGTCC 60.725 50.000 25.56 11.71 35.28 4.02
424 425 2.495939 CGATTTGCGTTTACAGCTGTC 58.504 47.619 25.56 9.27 35.28 3.51
425 426 1.399727 GCGATTTGCGTTTACAGCTGT 60.400 47.619 25.12 25.12 43.41 4.40
426 427 1.250476 GCGATTTGCGTTTACAGCTG 58.750 50.000 13.48 13.48 43.41 4.24
427 428 3.676091 GCGATTTGCGTTTACAGCT 57.324 47.368 0.00 0.00 43.41 4.24
437 438 2.262471 CTGCCCTCACAGCGATTTGC 62.262 60.000 0.00 0.00 46.98 3.68
438 439 1.651240 CCTGCCCTCACAGCGATTTG 61.651 60.000 0.00 0.00 36.29 2.32
439 440 1.377725 CCTGCCCTCACAGCGATTT 60.378 57.895 0.00 0.00 36.29 2.17
440 441 1.841302 TTCCTGCCCTCACAGCGATT 61.841 55.000 0.00 0.00 36.29 3.34
441 442 1.630126 ATTCCTGCCCTCACAGCGAT 61.630 55.000 0.00 0.00 36.29 4.58
442 443 1.841302 AATTCCTGCCCTCACAGCGA 61.841 55.000 0.00 0.00 36.29 4.93
443 444 0.107703 TAATTCCTGCCCTCACAGCG 60.108 55.000 0.00 0.00 36.29 5.18
444 445 1.673168 CTAATTCCTGCCCTCACAGC 58.327 55.000 0.00 0.00 36.29 4.40
445 446 1.561542 ACCTAATTCCTGCCCTCACAG 59.438 52.381 0.00 0.00 37.42 3.66
446 447 1.281867 CACCTAATTCCTGCCCTCACA 59.718 52.381 0.00 0.00 0.00 3.58
447 448 2.019156 GCACCTAATTCCTGCCCTCAC 61.019 57.143 0.00 0.00 0.00 3.51
448 449 0.255890 GCACCTAATTCCTGCCCTCA 59.744 55.000 0.00 0.00 0.00 3.86
449 450 0.815615 CGCACCTAATTCCTGCCCTC 60.816 60.000 0.00 0.00 0.00 4.30
450 451 1.224592 CGCACCTAATTCCTGCCCT 59.775 57.895 0.00 0.00 0.00 5.19
451 452 1.823899 CCGCACCTAATTCCTGCCC 60.824 63.158 0.00 0.00 0.00 5.36
452 453 0.679960 AACCGCACCTAATTCCTGCC 60.680 55.000 0.00 0.00 0.00 4.85
453 454 2.032680 TAACCGCACCTAATTCCTGC 57.967 50.000 0.00 0.00 0.00 4.85
454 455 4.750098 CAGTATAACCGCACCTAATTCCTG 59.250 45.833 0.00 0.00 0.00 3.86
455 456 4.407945 ACAGTATAACCGCACCTAATTCCT 59.592 41.667 0.00 0.00 0.00 3.36
456 457 4.700700 ACAGTATAACCGCACCTAATTCC 58.299 43.478 0.00 0.00 0.00 3.01
457 458 4.748600 GGACAGTATAACCGCACCTAATTC 59.251 45.833 0.00 0.00 0.00 2.17
458 459 4.407945 AGGACAGTATAACCGCACCTAATT 59.592 41.667 0.00 0.00 0.00 1.40
459 460 3.965347 AGGACAGTATAACCGCACCTAAT 59.035 43.478 0.00 0.00 0.00 1.73
460 461 3.368248 AGGACAGTATAACCGCACCTAA 58.632 45.455 0.00 0.00 0.00 2.69
461 462 3.022557 AGGACAGTATAACCGCACCTA 57.977 47.619 0.00 0.00 0.00 3.08
462 463 1.861982 AGGACAGTATAACCGCACCT 58.138 50.000 0.00 0.00 0.00 4.00
463 464 2.685850 AAGGACAGTATAACCGCACC 57.314 50.000 0.00 0.00 0.00 5.01
464 465 5.503520 GCAATTAAGGACAGTATAACCGCAC 60.504 44.000 0.00 0.00 0.00 5.34
465 466 4.573201 GCAATTAAGGACAGTATAACCGCA 59.427 41.667 0.00 0.00 0.00 5.69
466 467 4.318546 CGCAATTAAGGACAGTATAACCGC 60.319 45.833 0.00 0.00 0.00 5.68
467 468 4.807304 ACGCAATTAAGGACAGTATAACCG 59.193 41.667 0.00 0.00 0.00 4.44
468 469 7.654520 TGATACGCAATTAAGGACAGTATAACC 59.345 37.037 0.00 0.00 0.00 2.85
469 470 8.583810 TGATACGCAATTAAGGACAGTATAAC 57.416 34.615 0.00 0.00 0.00 1.89
470 471 7.870954 CCTGATACGCAATTAAGGACAGTATAA 59.129 37.037 0.00 0.00 0.00 0.98
471 472 7.231925 TCCTGATACGCAATTAAGGACAGTATA 59.768 37.037 0.00 0.00 29.89 1.47
472 473 6.041637 TCCTGATACGCAATTAAGGACAGTAT 59.958 38.462 0.00 0.00 29.89 2.12
473 474 5.361571 TCCTGATACGCAATTAAGGACAGTA 59.638 40.000 0.00 0.00 29.89 2.74
474 475 4.161565 TCCTGATACGCAATTAAGGACAGT 59.838 41.667 0.00 0.00 29.89 3.55
475 476 4.693283 TCCTGATACGCAATTAAGGACAG 58.307 43.478 0.00 0.00 29.89 3.51
476 477 4.746535 TCCTGATACGCAATTAAGGACA 57.253 40.909 0.00 0.00 29.89 4.02
477 478 6.260050 TGAATTCCTGATACGCAATTAAGGAC 59.740 38.462 2.27 0.00 32.96 3.85
478 479 6.353323 TGAATTCCTGATACGCAATTAAGGA 58.647 36.000 2.27 0.00 31.92 3.36
479 480 6.293626 CCTGAATTCCTGATACGCAATTAAGG 60.294 42.308 2.27 0.00 32.68 2.69
480 481 6.483307 TCCTGAATTCCTGATACGCAATTAAG 59.517 38.462 2.27 0.00 0.00 1.85
481 482 6.353323 TCCTGAATTCCTGATACGCAATTAA 58.647 36.000 2.27 0.00 0.00 1.40
482 483 5.924356 TCCTGAATTCCTGATACGCAATTA 58.076 37.500 2.27 0.00 0.00 1.40
483 484 4.780815 TCCTGAATTCCTGATACGCAATT 58.219 39.130 2.27 0.00 0.00 2.32
500 501 1.556911 GCTGATTCTGTTCCCTCCTGA 59.443 52.381 0.00 0.00 0.00 3.86
506 507 1.576356 CGCTAGCTGATTCTGTTCCC 58.424 55.000 13.93 0.00 0.00 3.97
508 509 2.197577 GACCGCTAGCTGATTCTGTTC 58.802 52.381 13.57 0.00 0.00 3.18
510 511 0.461961 GGACCGCTAGCTGATTCTGT 59.538 55.000 13.57 0.00 0.00 3.41
551 555 1.282875 GCCAAGTGAAGACGGTTGC 59.717 57.895 0.00 0.00 0.00 4.17
597 601 2.124983 GCAGCATCTTCCGCCTCA 60.125 61.111 0.00 0.00 0.00 3.86
600 604 3.733344 TACGGCAGCATCTTCCGCC 62.733 63.158 4.90 0.00 46.49 6.13
626 634 1.080298 GGGAAATGCAGTGCAGTGC 60.080 57.895 34.65 34.65 43.65 4.40
627 635 1.588082 GGGGAAATGCAGTGCAGTG 59.412 57.895 24.20 17.56 43.65 3.66
628 636 1.607467 GGGGGAAATGCAGTGCAGT 60.607 57.895 24.20 19.09 43.65 4.40
642 655 0.179045 AATCTCGCTTTCATCGGGGG 60.179 55.000 0.00 0.00 0.00 5.40
652 665 3.031964 GCACGCAGCAATCTCGCTT 62.032 57.895 0.00 0.00 41.38 4.68
670 683 2.401583 TCAACCTGGGATCAATCACG 57.598 50.000 0.00 0.00 31.21 4.35
671 684 2.360165 GCATCAACCTGGGATCAATCAC 59.640 50.000 0.00 0.00 0.00 3.06
700 970 1.729838 GCCCGATCGATACAGCGAC 60.730 63.158 18.66 0.00 43.79 5.19
761 1031 2.309764 CTAACCGGCATGCAAGTCGC 62.310 60.000 21.36 1.09 42.89 5.19
765 1035 1.750399 AGGCTAACCGGCATGCAAG 60.750 57.895 21.36 12.43 42.76 4.01
766 1036 2.045708 CAGGCTAACCGGCATGCAA 61.046 57.895 21.36 0.00 42.76 4.08
767 1037 2.438254 CAGGCTAACCGGCATGCA 60.438 61.111 21.36 0.00 42.76 3.96
952 1245 1.375523 GAATGGAAGGTCGTGCCGT 60.376 57.895 0.00 0.00 43.70 5.68
954 1247 0.608035 TTGGAATGGAAGGTCGTGCC 60.608 55.000 0.00 0.00 37.58 5.01
1158 1458 3.756727 GACGGGAGGGACGTGGAC 61.757 72.222 0.00 0.00 45.68 4.02
1301 1601 2.279937 GACGACGAAACCATGCGAGC 62.280 60.000 0.00 0.00 0.00 5.03
1305 1605 2.095843 GCGACGACGAAACCATGC 59.904 61.111 12.29 0.00 42.66 4.06
1307 1607 1.736645 CTGGCGACGACGAAACCAT 60.737 57.895 12.29 0.00 42.66 3.55
1308 1608 2.355363 CTGGCGACGACGAAACCA 60.355 61.111 12.29 8.15 42.66 3.67
1560 1860 3.315949 TTGGACGGGACCGGGAAG 61.316 66.667 15.92 0.00 44.69 3.46
1567 1867 2.356673 GACGTGGTTGGACGGGAC 60.357 66.667 0.00 0.00 43.84 4.46
1671 1971 0.898789 TGTCCCAGGAGACGGAGAAC 60.899 60.000 0.00 0.00 39.77 3.01
1710 2010 3.917760 CAGCGGAGGGACGGGATC 61.918 72.222 0.00 0.00 0.00 3.36
1782 2082 2.735857 GTGTACACCGTGCCGTCC 60.736 66.667 15.42 0.00 0.00 4.79
2258 2558 2.363795 TCCATTCCTCCTCGCCGT 60.364 61.111 0.00 0.00 0.00 5.68
2261 2561 2.066999 ACCCTCCATTCCTCCTCGC 61.067 63.158 0.00 0.00 0.00 5.03
2262 2562 0.978146 ACACCCTCCATTCCTCCTCG 60.978 60.000 0.00 0.00 0.00 4.63
2265 2565 1.077429 GCACACCCTCCATTCCTCC 60.077 63.158 0.00 0.00 0.00 4.30
2327 2633 1.815003 CCTACTACAAACCCGTCGTCT 59.185 52.381 0.00 0.00 0.00 4.18
2382 2688 5.040635 TCAAAAATCAGGAAACGCACTTTC 58.959 37.500 0.00 0.00 38.06 2.62
2383 2689 5.004922 TCAAAAATCAGGAAACGCACTTT 57.995 34.783 0.00 0.00 0.00 2.66
2384 2690 4.647424 TCAAAAATCAGGAAACGCACTT 57.353 36.364 0.00 0.00 0.00 3.16
2385 2691 4.520492 AGATCAAAAATCAGGAAACGCACT 59.480 37.500 0.00 0.00 0.00 4.40
2386 2692 4.618489 CAGATCAAAAATCAGGAAACGCAC 59.382 41.667 0.00 0.00 0.00 5.34
2387 2693 4.518590 TCAGATCAAAAATCAGGAAACGCA 59.481 37.500 0.00 0.00 0.00 5.24
2388 2694 5.046910 TCAGATCAAAAATCAGGAAACGC 57.953 39.130 0.00 0.00 0.00 4.84
2389 2695 7.081526 AGATCAGATCAAAAATCAGGAAACG 57.918 36.000 13.14 0.00 0.00 3.60
2390 2696 8.517878 TCAAGATCAGATCAAAAATCAGGAAAC 58.482 33.333 13.14 0.00 0.00 2.78
2429 2735 1.663643 TGTACACGACCGTACGTATCC 59.336 52.381 15.21 0.00 43.89 2.59
2484 2790 0.038159 AGAAGTTCGCCGAAGTCCAG 60.038 55.000 7.76 0.00 0.00 3.86
2532 2839 4.702131 AGAGGTCAATTGTGCCAATAAGTC 59.298 41.667 18.80 9.81 0.00 3.01
2539 2846 3.255642 GCTAAAAGAGGTCAATTGTGCCA 59.744 43.478 18.80 0.00 0.00 4.92
2547 2854 5.014202 GGGTAAATGGCTAAAAGAGGTCAA 58.986 41.667 0.00 0.00 0.00 3.18
2549 2856 3.952323 GGGGTAAATGGCTAAAAGAGGTC 59.048 47.826 0.00 0.00 0.00 3.85
2604 2920 7.034397 ACATCTCATGAATATAGCATCGACTG 58.966 38.462 0.00 0.00 0.00 3.51
2623 2939 4.966366 GCATAAATCTTCACGCAACATCTC 59.034 41.667 0.00 0.00 0.00 2.75
2704 3021 3.181448 GGTTAAGTTTCAGTCCACTGGGA 60.181 47.826 6.87 0.00 43.91 4.37
2705 3022 3.146847 GGTTAAGTTTCAGTCCACTGGG 58.853 50.000 6.87 0.00 43.91 4.45
2706 3023 3.564225 GTGGTTAAGTTTCAGTCCACTGG 59.436 47.826 6.87 0.00 43.91 4.00
2707 3024 4.035208 GTGTGGTTAAGTTTCAGTCCACTG 59.965 45.833 12.25 0.00 43.64 3.66
2708 3025 4.196971 GTGTGGTTAAGTTTCAGTCCACT 58.803 43.478 12.25 0.00 43.64 4.00
2709 3026 3.942748 TGTGTGGTTAAGTTTCAGTCCAC 59.057 43.478 0.00 0.00 43.58 4.02
2710 3027 3.942748 GTGTGTGGTTAAGTTTCAGTCCA 59.057 43.478 0.00 0.00 0.00 4.02
2711 3028 4.196971 AGTGTGTGGTTAAGTTTCAGTCC 58.803 43.478 0.00 0.00 0.00 3.85
2715 3032 5.357596 GGGTAAAGTGTGTGGTTAAGTTTCA 59.642 40.000 0.00 0.00 0.00 2.69
2718 3035 5.120054 AGGGTAAAGTGTGTGGTTAAGTT 57.880 39.130 0.00 0.00 0.00 2.66
2721 3038 6.497624 TCTTAGGGTAAAGTGTGTGGTTAA 57.502 37.500 0.00 0.00 0.00 2.01
2724 3041 5.313712 CAATCTTAGGGTAAAGTGTGTGGT 58.686 41.667 0.00 0.00 0.00 4.16
2730 3047 4.331968 TGTGCCAATCTTAGGGTAAAGTG 58.668 43.478 0.00 0.00 0.00 3.16
2731 3048 4.650972 TGTGCCAATCTTAGGGTAAAGT 57.349 40.909 0.00 0.00 0.00 2.66
2739 3056 4.761739 TGAGAACCTTTGTGCCAATCTTAG 59.238 41.667 0.00 0.00 0.00 2.18
2794 3111 6.625873 ATCTTTGAGGTGACTTGTTTTCTC 57.374 37.500 0.00 0.00 44.43 2.87
2824 3143 1.542915 CACAAGGAGAACCATGGCTTG 59.457 52.381 20.97 20.97 38.95 4.01
2834 3153 0.603707 CTGAAGCCGCACAAGGAGAA 60.604 55.000 0.00 0.00 0.00 2.87
2849 3168 2.443203 TCCCGATAGCCCGCTGAA 60.443 61.111 0.00 0.00 0.00 3.02
2850 3169 2.912542 CTCCCGATAGCCCGCTGA 60.913 66.667 0.00 0.00 0.00 4.26
2855 3174 1.410882 GATATGAGCTCCCGATAGCCC 59.589 57.143 12.15 0.00 43.86 5.19
2863 3182 1.001860 GACAGCCAGATATGAGCTCCC 59.998 57.143 12.15 0.00 33.70 4.30
3284 3603 4.803098 AGACTTGTGTATCCTACGCTTT 57.197 40.909 0.22 0.00 39.80 3.51
3299 3618 0.675633 CAAACCTGCCCCAAGACTTG 59.324 55.000 8.31 8.31 0.00 3.16
3305 3624 4.531426 ACGCCAAACCTGCCCCAA 62.531 61.111 0.00 0.00 0.00 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.