Multiple sequence alignment - TraesCS2B01G357900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G357900 chr2B 100.000 3737 0 0 1 3737 510799000 510795264 0.000000e+00 6902.0
1 TraesCS2B01G357900 chr2B 100.000 55 0 0 2996 3050 510795951 510795897 6.600000e-18 102.0
2 TraesCS2B01G357900 chr2B 100.000 55 0 0 3050 3104 510796005 510795951 6.600000e-18 102.0
3 TraesCS2B01G357900 chr2A 91.691 1384 75 22 1696 3050 554451979 554453351 0.000000e+00 1882.0
4 TraesCS2B01G357900 chr2A 86.111 612 51 7 679 1276 554450892 554451483 2.450000e-176 628.0
5 TraesCS2B01G357900 chr2A 89.149 470 32 13 1 456 554429151 554429615 5.420000e-158 568.0
6 TraesCS2B01G357900 chr2A 93.433 335 20 2 3050 3383 554453297 554453630 2.590000e-136 496.0
7 TraesCS2B01G357900 chr2A 86.667 150 11 5 3379 3525 554453934 554454077 1.390000e-34 158.0
8 TraesCS2B01G357900 chr2A 87.179 117 7 3 577 686 554429634 554429749 3.920000e-25 126.0
9 TraesCS2B01G357900 chr2D 93.600 625 34 4 2430 3050 432034057 432033435 0.000000e+00 928.0
10 TraesCS2B01G357900 chr2D 88.544 742 50 9 1683 2424 432034836 432034130 0.000000e+00 867.0
11 TraesCS2B01G357900 chr2D 87.950 722 52 13 577 1286 432035916 432035218 0.000000e+00 819.0
12 TraesCS2B01G357900 chr2D 92.560 457 28 4 1 455 432036389 432035937 0.000000e+00 651.0
13 TraesCS2B01G357900 chr2D 84.939 571 74 5 3173 3737 432032670 432032106 5.420000e-158 568.0
14 TraesCS2B01G357900 chr2D 89.011 182 19 1 2084 2265 604277654 604277474 1.350000e-54 224.0
15 TraesCS2B01G357900 chr2D 92.437 119 8 1 3050 3168 432033489 432033372 6.420000e-38 169.0
16 TraesCS2B01G357900 chr2D 93.750 48 3 0 1623 1670 35026105 35026152 5.180000e-09 73.1
17 TraesCS2B01G357900 chr2D 85.938 64 9 0 1379 1442 432035143 432035080 6.700000e-08 69.4
18 TraesCS2B01G357900 chr3D 89.371 668 60 3 3076 3737 433507130 433507792 0.000000e+00 830.0
19 TraesCS2B01G357900 chr3D 83.505 679 97 7 3067 3737 598594566 598595237 1.470000e-173 619.0
20 TraesCS2B01G357900 chr3D 90.545 275 22 2 3076 3346 433506860 433507134 9.870000e-96 361.0
21 TraesCS2B01G357900 chr1B 89.254 670 60 5 3067 3729 321685688 321686352 0.000000e+00 828.0
22 TraesCS2B01G357900 chr7B 88.791 678 64 5 3067 3737 580878976 580878304 0.000000e+00 821.0
23 TraesCS2B01G357900 chr7B 86.222 675 74 10 3069 3737 210428442 210427781 0.000000e+00 713.0
24 TraesCS2B01G357900 chr7B 87.603 121 14 1 463 583 617570622 617570741 5.030000e-29 139.0
25 TraesCS2B01G357900 chr7B 87.826 115 13 1 467 580 527614391 527614505 2.340000e-27 134.0
26 TraesCS2B01G357900 chr7B 94.000 50 3 0 1622 1671 368197881 368197930 4.000000e-10 76.8
27 TraesCS2B01G357900 chr3B 87.912 182 19 2 2084 2265 572076937 572077115 1.050000e-50 211.0
28 TraesCS2B01G357900 chr3B 86.813 182 23 1 2084 2265 83313072 83313252 6.330000e-48 202.0
29 TraesCS2B01G357900 chr3B 85.876 177 18 3 1283 1456 572076474 572076646 8.250000e-42 182.0
30 TraesCS2B01G357900 chr3B 86.777 121 14 2 463 582 762487208 762487327 2.340000e-27 134.0
31 TraesCS2B01G357900 chr5B 84.184 196 17 6 2084 2265 710871038 710871233 1.070000e-40 178.0
32 TraesCS2B01G357900 chr4A 88.333 120 14 0 463 582 714067117 714067236 1.080000e-30 145.0
33 TraesCS2B01G357900 chr6B 87.395 119 15 0 463 581 36133873 36133755 1.810000e-28 137.0
34 TraesCS2B01G357900 chr6B 95.833 48 2 0 1623 1670 566341380 566341333 1.110000e-10 78.7
35 TraesCS2B01G357900 chr6B 92.593 54 2 2 1619 1672 197530215 197530164 4.000000e-10 76.8
36 TraesCS2B01G357900 chr6D 86.555 119 16 0 463 581 4510921 4511039 8.420000e-27 132.0
37 TraesCS2B01G357900 chr1A 86.555 119 16 0 463 581 329250248 329250130 8.420000e-27 132.0
38 TraesCS2B01G357900 chr5D 85.714 119 17 0 463 581 405882765 405882883 3.920000e-25 126.0
39 TraesCS2B01G357900 chr5D 94.643 56 2 1 1617 1672 483018766 483018820 6.650000e-13 86.1
40 TraesCS2B01G357900 chr1D 84.252 127 20 0 457 583 407509446 407509572 1.410000e-24 124.0
41 TraesCS2B01G357900 chr1D 96.000 50 2 0 1623 1672 439751468 439751419 8.600000e-12 82.4
42 TraesCS2B01G357900 chr1D 90.909 55 5 0 1622 1676 331602958 331602904 1.440000e-09 75.0
43 TraesCS2B01G357900 chr7A 94.340 53 2 1 1619 1671 649194270 649194219 3.090000e-11 80.5
44 TraesCS2B01G357900 chr5A 95.918 49 1 1 1618 1665 479653631 479653679 1.110000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G357900 chr2B 510795264 510799000 3736 True 2368.666667 6902 100.0000 1 3737 3 chr2B.!!$R1 3736
1 TraesCS2B01G357900 chr2A 554450892 554454077 3185 False 791.000000 1882 89.4755 679 3525 4 chr2A.!!$F2 2846
2 TraesCS2B01G357900 chr2A 554429151 554429749 598 False 347.000000 568 88.1640 1 686 2 chr2A.!!$F1 685
3 TraesCS2B01G357900 chr2D 432032106 432036389 4283 True 581.628571 928 89.4240 1 3737 7 chr2D.!!$R2 3736
4 TraesCS2B01G357900 chr3D 598594566 598595237 671 False 619.000000 619 83.5050 3067 3737 1 chr3D.!!$F1 670
5 TraesCS2B01G357900 chr3D 433506860 433507792 932 False 595.500000 830 89.9580 3076 3737 2 chr3D.!!$F2 661
6 TraesCS2B01G357900 chr1B 321685688 321686352 664 False 828.000000 828 89.2540 3067 3729 1 chr1B.!!$F1 662
7 TraesCS2B01G357900 chr7B 580878304 580878976 672 True 821.000000 821 88.7910 3067 3737 1 chr7B.!!$R2 670
8 TraesCS2B01G357900 chr7B 210427781 210428442 661 True 713.000000 713 86.2220 3069 3737 1 chr7B.!!$R1 668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
477 503 0.251297 TTCGTACTTCCCCCGTCTGA 60.251 55.0 0.00 0.0 0.0 3.27 F
1143 1182 0.685097 TGCACCCTCGAGTTTAAGCT 59.315 50.0 12.31 0.0 0.0 3.74 F
2336 2611 0.240945 GTTGGTGTGCTATGGTGTGC 59.759 55.0 0.00 0.0 0.0 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1287 1341 0.253044 CCTGAATTTCCCGGAGAGCA 59.747 55.0 0.73 0.0 0.0 4.26 R
2607 2948 0.103208 CCTGAGAGTATGTGCCGACC 59.897 60.0 0.00 0.0 0.0 4.79 R
3309 4629 0.324943 ATGTGGAGTTGGACCTTCGG 59.675 55.0 0.00 0.0 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 2.282040 GCCCTGCAAGTGAGCTGT 60.282 61.111 0.00 0.00 34.99 4.40
111 112 8.699749 TCTGTATATTGACGAAAAATATCGCAG 58.300 33.333 16.35 16.35 46.51 5.18
112 113 8.360325 TGTATATTGACGAAAAATATCGCAGT 57.640 30.769 0.00 0.00 46.51 4.40
117 118 4.565166 TGACGAAAAATATCGCAGTACCTG 59.435 41.667 0.00 0.00 46.51 4.00
128 129 5.468540 TCGCAGTACCTGATGCTAATAAT 57.531 39.130 3.66 0.00 40.34 1.28
130 131 6.621613 TCGCAGTACCTGATGCTAATAATAG 58.378 40.000 3.66 0.00 40.34 1.73
131 132 6.208797 TCGCAGTACCTGATGCTAATAATAGT 59.791 38.462 3.66 0.00 40.34 2.12
132 133 7.392393 TCGCAGTACCTGATGCTAATAATAGTA 59.608 37.037 3.66 0.00 40.34 1.82
133 134 7.485277 CGCAGTACCTGATGCTAATAATAGTAC 59.515 40.741 3.66 0.00 40.34 2.73
134 135 7.485277 GCAGTACCTGATGCTAATAATAGTACG 59.515 40.741 0.00 0.00 39.38 3.67
135 136 7.968956 CAGTACCTGATGCTAATAATAGTACGG 59.031 40.741 0.00 0.00 34.28 4.02
136 137 6.912951 ACCTGATGCTAATAATAGTACGGT 57.087 37.500 0.00 0.00 0.00 4.83
138 139 8.413309 ACCTGATGCTAATAATAGTACGGTAA 57.587 34.615 0.00 0.00 0.00 2.85
139 140 8.302438 ACCTGATGCTAATAATAGTACGGTAAC 58.698 37.037 0.00 0.00 0.00 2.50
140 141 8.301720 CCTGATGCTAATAATAGTACGGTAACA 58.698 37.037 0.00 0.00 0.00 2.41
153 154 6.803642 AGTACGGTAACATAGATTCCAGTTC 58.196 40.000 0.00 0.00 0.00 3.01
159 160 3.539604 ACATAGATTCCAGTTCTGCAGC 58.460 45.455 9.47 0.00 0.00 5.25
161 162 2.399916 AGATTCCAGTTCTGCAGCTC 57.600 50.000 9.47 4.27 0.00 4.09
163 164 2.039480 AGATTCCAGTTCTGCAGCTCAA 59.961 45.455 9.47 0.00 0.00 3.02
164 165 1.888215 TTCCAGTTCTGCAGCTCAAG 58.112 50.000 9.47 0.00 0.00 3.02
175 176 3.748083 TGCAGCTCAAGTCTGAATTCTT 58.252 40.909 7.05 0.00 33.54 2.52
400 409 3.697542 GTGTCACCCTAACAAACCAGTTT 59.302 43.478 0.00 0.00 33.07 2.66
401 410 4.158949 GTGTCACCCTAACAAACCAGTTTT 59.841 41.667 0.00 0.00 33.07 2.43
449 461 4.036380 CACAAGTCTGTAAACTGGGGTTTC 59.964 45.833 0.00 0.00 43.62 2.78
465 491 3.499537 GGGTTTCGTTCCAATTTCGTACT 59.500 43.478 0.00 0.00 0.00 2.73
466 492 4.023792 GGGTTTCGTTCCAATTTCGTACTT 60.024 41.667 0.00 0.00 0.00 2.24
467 493 5.142265 GGTTTCGTTCCAATTTCGTACTTC 58.858 41.667 0.00 0.00 0.00 3.01
468 494 4.996062 TTCGTTCCAATTTCGTACTTCC 57.004 40.909 0.00 0.00 0.00 3.46
469 495 3.328505 TCGTTCCAATTTCGTACTTCCC 58.671 45.455 0.00 0.00 0.00 3.97
470 496 2.417586 CGTTCCAATTTCGTACTTCCCC 59.582 50.000 0.00 0.00 0.00 4.81
471 497 2.751259 GTTCCAATTTCGTACTTCCCCC 59.249 50.000 0.00 0.00 0.00 5.40
472 498 1.065998 TCCAATTTCGTACTTCCCCCG 60.066 52.381 0.00 0.00 0.00 5.73
473 499 1.339342 CCAATTTCGTACTTCCCCCGT 60.339 52.381 0.00 0.00 0.00 5.28
474 500 2.004733 CAATTTCGTACTTCCCCCGTC 58.995 52.381 0.00 0.00 0.00 4.79
475 501 1.565067 ATTTCGTACTTCCCCCGTCT 58.435 50.000 0.00 0.00 0.00 4.18
476 502 0.604578 TTTCGTACTTCCCCCGTCTG 59.395 55.000 0.00 0.00 0.00 3.51
477 503 0.251297 TTCGTACTTCCCCCGTCTGA 60.251 55.000 0.00 0.00 0.00 3.27
478 504 0.251297 TCGTACTTCCCCCGTCTGAA 60.251 55.000 0.00 0.00 0.00 3.02
479 505 0.604578 CGTACTTCCCCCGTCTGAAA 59.395 55.000 0.00 0.00 0.00 2.69
480 506 1.001181 CGTACTTCCCCCGTCTGAAAA 59.999 52.381 0.00 0.00 0.00 2.29
481 507 2.354403 CGTACTTCCCCCGTCTGAAAAT 60.354 50.000 0.00 0.00 0.00 1.82
482 508 3.119029 CGTACTTCCCCCGTCTGAAAATA 60.119 47.826 0.00 0.00 0.00 1.40
483 509 3.345508 ACTTCCCCCGTCTGAAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
484 510 2.910977 ACTTCCCCCGTCTGAAAATACT 59.089 45.455 0.00 0.00 0.00 2.12
485 511 3.329814 ACTTCCCCCGTCTGAAAATACTT 59.670 43.478 0.00 0.00 0.00 2.24
486 512 3.343941 TCCCCCGTCTGAAAATACTTG 57.656 47.619 0.00 0.00 0.00 3.16
487 513 2.640826 TCCCCCGTCTGAAAATACTTGT 59.359 45.455 0.00 0.00 0.00 3.16
488 514 3.007635 CCCCCGTCTGAAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
489 515 2.671396 CCCCGTCTGAAAATACTTGTCG 59.329 50.000 0.00 0.00 0.00 4.35
490 516 2.671396 CCCGTCTGAAAATACTTGTCGG 59.329 50.000 0.00 0.00 36.00 4.79
491 517 3.581755 CCGTCTGAAAATACTTGTCGGA 58.418 45.455 0.00 0.00 38.03 4.55
492 518 3.367025 CCGTCTGAAAATACTTGTCGGAC 59.633 47.826 0.00 0.00 42.03 4.79
493 519 3.985279 CGTCTGAAAATACTTGTCGGACA 59.015 43.478 6.76 6.76 44.50 4.02
494 520 4.446385 CGTCTGAAAATACTTGTCGGACAA 59.554 41.667 21.30 21.30 44.50 3.18
495 521 5.050634 CGTCTGAAAATACTTGTCGGACAAA 60.051 40.000 22.60 10.91 44.50 2.83
496 522 6.347402 CGTCTGAAAATACTTGTCGGACAAAT 60.347 38.462 22.60 16.57 44.50 2.32
497 523 6.797033 GTCTGAAAATACTTGTCGGACAAATG 59.203 38.462 22.60 15.05 43.96 2.32
498 524 5.457140 TGAAAATACTTGTCGGACAAATGC 58.543 37.500 22.60 9.76 37.69 3.56
499 525 5.009110 TGAAAATACTTGTCGGACAAATGCA 59.991 36.000 22.60 11.80 37.69 3.96
500 526 4.419522 AATACTTGTCGGACAAATGCAC 57.580 40.909 22.60 0.00 37.69 4.57
501 527 1.674359 ACTTGTCGGACAAATGCACA 58.326 45.000 22.60 0.90 37.69 4.57
502 528 2.020720 ACTTGTCGGACAAATGCACAA 58.979 42.857 22.60 0.18 37.69 3.33
503 529 2.425312 ACTTGTCGGACAAATGCACAAA 59.575 40.909 22.60 0.00 37.69 2.83
504 530 3.119316 ACTTGTCGGACAAATGCACAAAA 60.119 39.130 22.60 0.00 37.69 2.44
505 531 3.510388 TGTCGGACAAATGCACAAAAA 57.490 38.095 8.68 0.00 0.00 1.94
506 532 4.052159 TGTCGGACAAATGCACAAAAAT 57.948 36.364 8.68 0.00 0.00 1.82
507 533 5.188327 TGTCGGACAAATGCACAAAAATA 57.812 34.783 8.68 0.00 0.00 1.40
508 534 5.592054 TGTCGGACAAATGCACAAAAATAA 58.408 33.333 8.68 0.00 0.00 1.40
509 535 6.042777 TGTCGGACAAATGCACAAAAATAAA 58.957 32.000 8.68 0.00 0.00 1.40
510 536 6.703607 TGTCGGACAAATGCACAAAAATAAAT 59.296 30.769 8.68 0.00 0.00 1.40
511 537 7.867909 TGTCGGACAAATGCACAAAAATAAATA 59.132 29.630 8.68 0.00 0.00 1.40
512 538 8.868916 GTCGGACAAATGCACAAAAATAAATAT 58.131 29.630 2.62 0.00 0.00 1.28
551 577 9.490379 AATACGTCTAGATACATCCATTTTTCC 57.510 33.333 0.00 0.00 0.00 3.13
552 578 7.125792 ACGTCTAGATACATCCATTTTTCCT 57.874 36.000 0.00 0.00 0.00 3.36
553 579 8.246430 ACGTCTAGATACATCCATTTTTCCTA 57.754 34.615 0.00 0.00 0.00 2.94
554 580 8.142551 ACGTCTAGATACATCCATTTTTCCTAC 58.857 37.037 0.00 0.00 0.00 3.18
555 581 8.141909 CGTCTAGATACATCCATTTTTCCTACA 58.858 37.037 0.00 0.00 0.00 2.74
556 582 9.832445 GTCTAGATACATCCATTTTTCCTACAA 57.168 33.333 0.00 0.00 0.00 2.41
558 584 9.838339 CTAGATACATCCATTTTTCCTACAAGT 57.162 33.333 0.00 0.00 0.00 3.16
565 591 9.289303 CATCCATTTTTCCTACAAGTATTTTCG 57.711 33.333 0.00 0.00 0.00 3.46
566 592 7.822658 TCCATTTTTCCTACAAGTATTTTCGG 58.177 34.615 0.00 0.00 0.00 4.30
567 593 7.666388 TCCATTTTTCCTACAAGTATTTTCGGA 59.334 33.333 0.00 0.00 0.00 4.55
568 594 7.753580 CCATTTTTCCTACAAGTATTTTCGGAC 59.246 37.037 0.00 0.00 0.00 4.79
569 595 6.470557 TTTTCCTACAAGTATTTTCGGACG 57.529 37.500 0.00 0.00 0.00 4.79
570 596 4.114058 TCCTACAAGTATTTTCGGACGG 57.886 45.455 0.00 0.00 0.00 4.79
571 597 3.763360 TCCTACAAGTATTTTCGGACGGA 59.237 43.478 0.00 0.00 0.00 4.69
572 598 4.110482 CCTACAAGTATTTTCGGACGGAG 58.890 47.826 0.00 0.00 0.00 4.63
573 599 2.968675 ACAAGTATTTTCGGACGGAGG 58.031 47.619 0.00 0.00 0.00 4.30
574 600 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
575 601 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
576 602 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
577 603 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
578 604 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
579 605 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
580 606 0.251297 TTTCGGACGGAGGGAGTACA 60.251 55.000 0.00 0.00 0.00 2.90
581 607 0.251297 TTCGGACGGAGGGAGTACAA 60.251 55.000 0.00 0.00 0.00 2.41
585 611 2.354403 CGGACGGAGGGAGTACAATTTT 60.354 50.000 0.00 0.00 0.00 1.82
608 634 4.847512 TCCCTGGATTTTACTGTCCTTGTA 59.152 41.667 0.00 0.00 35.49 2.41
666 699 0.947244 GTGTGACTGGCCTGTGAAAG 59.053 55.000 21.29 1.30 0.00 2.62
1039 1078 3.902086 GCGACGCCCTACCCTCTC 61.902 72.222 9.14 0.00 0.00 3.20
1049 1088 0.756070 CTACCCTCTCGTTCCCCCTC 60.756 65.000 0.00 0.00 0.00 4.30
1054 1093 1.066071 CCTCTCGTTCCCCCTCTTTTC 60.066 57.143 0.00 0.00 0.00 2.29
1056 1095 3.097614 CTCTCGTTCCCCCTCTTTTCTA 58.902 50.000 0.00 0.00 0.00 2.10
1058 1097 3.705072 TCTCGTTCCCCCTCTTTTCTATC 59.295 47.826 0.00 0.00 0.00 2.08
1059 1098 2.770232 TCGTTCCCCCTCTTTTCTATCC 59.230 50.000 0.00 0.00 0.00 2.59
1068 1107 4.363999 CCTCTTTTCTATCCTGTACTGCG 58.636 47.826 0.00 0.00 0.00 5.18
1069 1108 4.363999 CTCTTTTCTATCCTGTACTGCGG 58.636 47.826 0.00 0.00 0.00 5.69
1080 1119 1.540707 TGTACTGCGGTCGTACATGAA 59.459 47.619 0.00 0.00 41.47 2.57
1087 1126 2.475519 GCGGTCGTACATGAATGTTTGG 60.476 50.000 0.00 0.00 41.97 3.28
1092 1131 3.308595 TCGTACATGAATGTTTGGCGATC 59.691 43.478 0.00 0.00 41.97 3.69
1096 1135 2.017138 TGAATGTTTGGCGATCGCTA 57.983 45.000 36.25 30.27 41.60 4.26
1114 1153 3.249799 CGCTACGGCAAATTGGATGATTA 59.750 43.478 0.00 0.00 38.60 1.75
1115 1154 4.083324 CGCTACGGCAAATTGGATGATTAT 60.083 41.667 0.00 0.00 38.60 1.28
1143 1182 0.685097 TGCACCCTCGAGTTTAAGCT 59.315 50.000 12.31 0.00 0.00 3.74
1171 1212 3.006537 AGGAGAGCTTAGTTGCACGTTTA 59.993 43.478 0.00 0.00 34.99 2.01
1173 1214 3.326747 AGAGCTTAGTTGCACGTTTAGG 58.673 45.455 0.00 0.00 34.99 2.69
1174 1215 3.064931 GAGCTTAGTTGCACGTTTAGGT 58.935 45.455 0.00 0.00 34.99 3.08
1180 1221 1.193874 GTTGCACGTTTAGGTTCGAGG 59.806 52.381 0.00 0.00 0.00 4.63
1190 1231 0.912486 AGGTTCGAGGGAGATTTGGG 59.088 55.000 0.00 0.00 0.00 4.12
1193 1234 2.357075 GTTCGAGGGAGATTTGGGAAC 58.643 52.381 0.00 0.00 0.00 3.62
1224 1278 2.919228 ACCTGATCGGTGGATTTTAGC 58.081 47.619 8.20 0.00 46.80 3.09
1258 1312 6.401955 GCTAAAGGAGAGCGATTATGATTC 57.598 41.667 0.00 0.00 0.00 2.52
1260 1314 6.310224 GCTAAAGGAGAGCGATTATGATTCTC 59.690 42.308 0.00 0.00 34.86 2.87
1268 1322 2.740981 CGATTATGATTCTCAGGGCTGC 59.259 50.000 0.00 0.00 0.00 5.25
1287 1341 2.025981 TGCAGAGCACTGGAATATGGTT 60.026 45.455 13.26 0.00 41.25 3.67
1289 1343 2.357009 CAGAGCACTGGAATATGGTTGC 59.643 50.000 2.82 0.00 40.14 4.17
1290 1344 2.240667 AGAGCACTGGAATATGGTTGCT 59.759 45.455 0.00 0.00 0.00 3.91
1291 1345 2.615912 GAGCACTGGAATATGGTTGCTC 59.384 50.000 5.69 5.69 40.24 4.26
1292 1346 2.240667 AGCACTGGAATATGGTTGCTCT 59.759 45.455 0.00 0.00 0.00 4.09
1293 1347 2.615912 GCACTGGAATATGGTTGCTCTC 59.384 50.000 0.00 0.00 0.00 3.20
1294 1348 3.209410 CACTGGAATATGGTTGCTCTCC 58.791 50.000 0.00 0.00 0.00 3.71
1295 1349 2.158900 ACTGGAATATGGTTGCTCTCCG 60.159 50.000 0.00 0.00 0.00 4.63
1296 1350 1.140852 TGGAATATGGTTGCTCTCCGG 59.859 52.381 0.00 0.00 0.00 5.14
1297 1351 1.543429 GGAATATGGTTGCTCTCCGGG 60.543 57.143 0.00 0.00 0.00 5.73
1298 1352 1.416401 GAATATGGTTGCTCTCCGGGA 59.584 52.381 0.00 0.00 0.00 5.14
1299 1353 1.507140 ATATGGTTGCTCTCCGGGAA 58.493 50.000 0.00 0.00 0.00 3.97
1300 1354 1.281419 TATGGTTGCTCTCCGGGAAA 58.719 50.000 0.00 0.00 0.00 3.13
1301 1355 0.625849 ATGGTTGCTCTCCGGGAAAT 59.374 50.000 0.00 0.00 0.00 2.17
1302 1356 0.404040 TGGTTGCTCTCCGGGAAATT 59.596 50.000 0.00 0.00 0.00 1.82
1303 1357 1.095600 GGTTGCTCTCCGGGAAATTC 58.904 55.000 0.00 0.00 0.00 2.17
1304 1358 1.613255 GGTTGCTCTCCGGGAAATTCA 60.613 52.381 0.00 0.00 0.00 2.57
1305 1359 1.740025 GTTGCTCTCCGGGAAATTCAG 59.260 52.381 0.00 0.00 0.00 3.02
1306 1360 0.253044 TGCTCTCCGGGAAATTCAGG 59.747 55.000 0.00 0.00 0.00 3.86
1307 1361 0.464554 GCTCTCCGGGAAATTCAGGG 60.465 60.000 0.00 1.81 0.00 4.45
1308 1362 1.204146 CTCTCCGGGAAATTCAGGGA 58.796 55.000 0.00 5.70 0.00 4.20
1309 1363 1.139853 CTCTCCGGGAAATTCAGGGAG 59.860 57.143 19.34 19.34 44.46 4.30
1310 1364 1.204146 CTCCGGGAAATTCAGGGAGA 58.796 55.000 20.23 0.00 45.66 3.71
1311 1365 1.771255 CTCCGGGAAATTCAGGGAGAT 59.229 52.381 20.23 0.00 45.66 2.75
1312 1366 2.972713 CTCCGGGAAATTCAGGGAGATA 59.027 50.000 20.23 0.00 45.66 1.98
1313 1367 3.584848 CTCCGGGAAATTCAGGGAGATAT 59.415 47.826 20.23 0.00 45.66 1.63
1314 1368 3.980698 TCCGGGAAATTCAGGGAGATATT 59.019 43.478 0.00 0.00 0.00 1.28
1315 1369 4.415512 TCCGGGAAATTCAGGGAGATATTT 59.584 41.667 0.00 0.00 0.00 1.40
1316 1370 5.609284 TCCGGGAAATTCAGGGAGATATTTA 59.391 40.000 0.00 0.00 0.00 1.40
1328 1382 5.046950 AGGGAGATATTTATGAACTCGGCTC 60.047 44.000 0.00 0.00 0.00 4.70
1341 1395 2.359169 CGGCTCCTAGCAGGTCCAA 61.359 63.158 0.78 0.00 44.75 3.53
1345 1399 1.137282 GCTCCTAGCAGGTCCAACTAC 59.863 57.143 0.00 0.00 41.89 2.73
1361 1415 1.066858 ACTACGAGTGAAGCCATGGTG 60.067 52.381 14.67 0.00 0.00 4.17
1363 1417 2.401766 CGAGTGAAGCCATGGTGCC 61.402 63.158 14.67 3.03 0.00 5.01
1364 1418 2.036256 AGTGAAGCCATGGTGCCC 59.964 61.111 14.67 0.00 0.00 5.36
1366 1420 1.907807 GTGAAGCCATGGTGCCCAA 60.908 57.895 14.67 0.00 36.95 4.12
1367 1421 1.607178 TGAAGCCATGGTGCCCAAG 60.607 57.895 14.67 0.00 36.95 3.61
1369 1423 0.323360 GAAGCCATGGTGCCCAAGTA 60.323 55.000 14.67 0.00 36.95 2.24
1372 1426 0.746659 GCCATGGTGCCCAAGTATTC 59.253 55.000 14.67 0.00 36.95 1.75
1373 1427 1.959508 GCCATGGTGCCCAAGTATTCA 60.960 52.381 14.67 0.00 36.95 2.57
1374 1428 1.750778 CCATGGTGCCCAAGTATTCAC 59.249 52.381 2.57 0.00 36.95 3.18
1376 1430 3.662290 GGTGCCCAAGTATTCACCA 57.338 52.632 5.47 0.00 46.09 4.17
1377 1431 1.173913 GGTGCCCAAGTATTCACCAC 58.826 55.000 5.47 0.00 46.09 4.16
1382 1458 2.228822 GCCCAAGTATTCACCACTGTTG 59.771 50.000 0.00 0.00 0.00 3.33
1412 1489 1.597854 CAAGCGTGGCACCTTGAGA 60.598 57.895 29.37 0.00 40.59 3.27
1416 1493 1.069765 CGTGGCACCTTGAGAGTGT 59.930 57.895 12.86 0.00 37.56 3.55
1417 1494 0.317160 CGTGGCACCTTGAGAGTGTA 59.683 55.000 12.86 0.00 37.56 2.90
1420 1497 2.808543 GTGGCACCTTGAGAGTGTAAAG 59.191 50.000 6.29 0.00 37.56 1.85
1424 1501 5.189736 TGGCACCTTGAGAGTGTAAAGATAT 59.810 40.000 0.00 0.00 37.56 1.63
1429 1506 9.307121 CACCTTGAGAGTGTAAAGATATGTTAG 57.693 37.037 0.00 0.00 0.00 2.34
1435 1512 9.906660 GAGAGTGTAAAGATATGTTAGATCTGG 57.093 37.037 5.18 0.00 33.85 3.86
1450 1527 4.809193 AGATCTGGACCTAAGTATGCTGA 58.191 43.478 0.00 0.00 0.00 4.26
1451 1528 5.211973 AGATCTGGACCTAAGTATGCTGAA 58.788 41.667 0.00 0.00 0.00 3.02
1453 1530 5.086104 TCTGGACCTAAGTATGCTGAAAC 57.914 43.478 0.00 0.00 0.00 2.78
1454 1531 4.777896 TCTGGACCTAAGTATGCTGAAACT 59.222 41.667 0.00 0.00 0.00 2.66
1455 1532 5.955959 TCTGGACCTAAGTATGCTGAAACTA 59.044 40.000 0.00 0.00 0.00 2.24
1456 1533 5.974108 TGGACCTAAGTATGCTGAAACTAC 58.026 41.667 0.00 0.00 0.00 2.73
1457 1534 5.041940 GGACCTAAGTATGCTGAAACTACG 58.958 45.833 0.00 0.00 0.00 3.51
1458 1535 5.163581 GGACCTAAGTATGCTGAAACTACGA 60.164 44.000 0.00 0.00 0.00 3.43
1459 1536 6.276832 ACCTAAGTATGCTGAAACTACGAA 57.723 37.500 0.00 0.00 0.00 3.85
1460 1537 6.098017 ACCTAAGTATGCTGAAACTACGAAC 58.902 40.000 0.00 0.00 0.00 3.95
1462 1539 6.812160 CCTAAGTATGCTGAAACTACGAACTT 59.188 38.462 0.00 0.00 0.00 2.66
1464 1541 7.492352 AAGTATGCTGAAACTACGAACTTTT 57.508 32.000 0.00 0.00 0.00 2.27
1483 1560 2.018544 TTTTTCTGGACACACGGCG 58.981 52.632 4.80 4.80 0.00 6.46
1485 1562 1.155424 TTTTCTGGACACACGGCGTC 61.155 55.000 10.85 0.00 0.00 5.19
1486 1563 2.299503 TTTCTGGACACACGGCGTCA 62.300 55.000 10.85 3.46 34.97 4.35
1487 1564 2.964438 TTCTGGACACACGGCGTCAC 62.964 60.000 10.85 1.33 34.97 3.67
1494 1656 1.144969 CACACGGCGTCACTTTATGT 58.855 50.000 10.85 0.00 0.00 2.29
1496 1658 2.091588 CACACGGCGTCACTTTATGTAC 59.908 50.000 10.85 0.00 0.00 2.90
1500 1662 4.206404 CACGGCGTCACTTTATGTACTATG 59.794 45.833 10.85 0.00 0.00 2.23
1501 1663 3.181774 CGGCGTCACTTTATGTACTATGC 59.818 47.826 0.00 0.00 0.00 3.14
1503 1665 4.209288 GGCGTCACTTTATGTACTATGCAG 59.791 45.833 0.00 0.00 0.00 4.41
1505 1667 4.209288 CGTCACTTTATGTACTATGCAGGC 59.791 45.833 0.00 0.00 0.00 4.85
1508 1670 5.584649 TCACTTTATGTACTATGCAGGCAAC 59.415 40.000 0.00 0.00 0.00 4.17
1509 1671 5.353956 CACTTTATGTACTATGCAGGCAACA 59.646 40.000 0.00 0.00 41.41 3.33
1510 1672 5.354234 ACTTTATGTACTATGCAGGCAACAC 59.646 40.000 0.00 0.00 41.41 3.32
1516 1678 4.220693 ACTATGCAGGCAACACAATCTA 57.779 40.909 0.00 0.00 41.41 1.98
1518 1680 2.268762 TGCAGGCAACACAATCTACA 57.731 45.000 0.00 0.00 41.41 2.74
1519 1681 2.153645 TGCAGGCAACACAATCTACAG 58.846 47.619 0.00 0.00 41.41 2.74
1521 1683 2.554032 GCAGGCAACACAATCTACAGTT 59.446 45.455 0.00 0.00 41.41 3.16
1529 1691 9.489084 GGCAACACAATCTACAGTTATCATATA 57.511 33.333 0.00 0.00 0.00 0.86
1567 1729 9.681692 TTTGAATACTGTGAATGTTTTGATGAG 57.318 29.630 0.00 0.00 0.00 2.90
1574 1736 5.221481 TGTGAATGTTTTGATGAGGCACATT 60.221 36.000 0.00 0.00 40.07 2.71
1576 1738 5.927689 TGAATGTTTTGATGAGGCACATTTC 59.072 36.000 0.00 0.00 38.02 2.17
1581 1743 2.513753 TGATGAGGCACATTTCCGTTT 58.486 42.857 0.00 0.00 39.56 3.60
1582 1744 2.228582 TGATGAGGCACATTTCCGTTTG 59.771 45.455 0.00 0.00 39.56 2.93
1592 1754 4.048504 ACATTTCCGTTTGTGCTTTTAGC 58.951 39.130 0.00 0.00 42.82 3.09
1610 1772 9.261180 GCTTTTAGCATATAGTCATGTCAAGTA 57.739 33.333 0.00 0.00 41.89 2.24
1613 1775 9.750125 TTTAGCATATAGTCATGTCAAGTACTG 57.250 33.333 0.00 0.00 0.00 2.74
1614 1776 7.353414 AGCATATAGTCATGTCAAGTACTGT 57.647 36.000 0.00 0.00 0.00 3.55
1615 1777 8.465273 AGCATATAGTCATGTCAAGTACTGTA 57.535 34.615 0.00 0.00 0.00 2.74
1616 1778 8.353684 AGCATATAGTCATGTCAAGTACTGTAC 58.646 37.037 9.93 9.93 0.00 2.90
1617 1779 7.595502 GCATATAGTCATGTCAAGTACTGTACC 59.404 40.741 14.05 0.12 0.00 3.34
1618 1780 8.851145 CATATAGTCATGTCAAGTACTGTACCT 58.149 37.037 14.05 0.00 0.00 3.08
1619 1781 7.719871 ATAGTCATGTCAAGTACTGTACCTT 57.280 36.000 14.05 5.74 0.00 3.50
1620 1782 6.420913 AGTCATGTCAAGTACTGTACCTTT 57.579 37.500 14.05 0.75 0.00 3.11
1621 1783 6.456501 AGTCATGTCAAGTACTGTACCTTTC 58.543 40.000 14.05 4.53 0.00 2.62
1622 1784 6.267928 AGTCATGTCAAGTACTGTACCTTTCT 59.732 38.462 14.05 0.00 0.00 2.52
1623 1785 6.929606 GTCATGTCAAGTACTGTACCTTTCTT 59.070 38.462 14.05 0.00 0.00 2.52
1624 1786 7.441458 GTCATGTCAAGTACTGTACCTTTCTTT 59.559 37.037 14.05 0.00 0.00 2.52
1625 1787 7.990886 TCATGTCAAGTACTGTACCTTTCTTTT 59.009 33.333 14.05 0.00 0.00 2.27
1626 1788 8.621286 CATGTCAAGTACTGTACCTTTCTTTTT 58.379 33.333 14.05 0.00 0.00 1.94
1644 1806 2.989422 TTTAGAAAAGAGGCGCTTGC 57.011 45.000 7.64 0.00 36.80 4.01
1655 1817 3.059386 CGCTTGCCCGGCCTTAAA 61.059 61.111 7.03 0.00 0.00 1.52
1656 1818 2.571757 GCTTGCCCGGCCTTAAAC 59.428 61.111 7.03 0.00 0.00 2.01
1657 1819 1.977009 GCTTGCCCGGCCTTAAACT 60.977 57.895 7.03 0.00 0.00 2.66
1658 1820 1.883021 CTTGCCCGGCCTTAAACTG 59.117 57.895 7.03 0.00 0.00 3.16
1659 1821 0.608035 CTTGCCCGGCCTTAAACTGA 60.608 55.000 7.03 0.00 0.00 3.41
1660 1822 0.608035 TTGCCCGGCCTTAAACTGAG 60.608 55.000 7.03 0.00 0.00 3.35
1661 1823 1.749258 GCCCGGCCTTAAACTGAGG 60.749 63.158 0.00 0.00 37.35 3.86
1668 1830 2.711978 CCTTAAACTGAGGCCCCTAC 57.288 55.000 0.00 0.00 0.00 3.18
1669 1831 1.913419 CCTTAAACTGAGGCCCCTACA 59.087 52.381 0.00 0.00 0.00 2.74
1670 1832 2.092914 CCTTAAACTGAGGCCCCTACAG 60.093 54.545 0.00 7.22 37.62 2.74
1671 1833 1.580059 TAAACTGAGGCCCCTACAGG 58.420 55.000 17.01 0.00 36.17 4.00
1680 1842 3.007581 CCCCTACAGGCCAAGTACT 57.992 57.895 5.01 0.00 0.00 2.73
1681 1843 0.541863 CCCCTACAGGCCAAGTACTG 59.458 60.000 5.01 0.00 40.48 2.74
1691 1853 3.705072 AGGCCAAGTACTGTACCTATGAC 59.295 47.826 14.05 3.62 29.88 3.06
1692 1854 3.449737 GGCCAAGTACTGTACCTATGACA 59.550 47.826 14.05 0.00 0.00 3.58
1698 1965 7.284716 CCAAGTACTGTACCTATGACAGATACA 59.715 40.741 14.05 0.00 46.01 2.29
1707 1974 5.837979 ACCTATGACAGATACAATCTCAGCT 59.162 40.000 0.00 0.00 37.58 4.24
1715 1982 4.874966 AGATACAATCTCAGCTTCTGTTGC 59.125 41.667 0.00 0.00 33.42 4.17
1753 2020 2.619931 TGGACTGAAGGATCACTGGAA 58.380 47.619 0.00 0.00 0.00 3.53
1783 2050 3.119316 ACGCTCTGGTTGACTATCTGAAG 60.119 47.826 0.00 0.00 0.00 3.02
1786 2053 4.825422 CTCTGGTTGACTATCTGAAGCAA 58.175 43.478 0.00 0.00 0.00 3.91
1804 2071 3.120338 AGCAATATGGTGTTGTTCGAACG 60.120 43.478 22.48 5.54 0.00 3.95
1807 2074 1.223187 ATGGTGTTGTTCGAACGGAC 58.777 50.000 22.48 21.70 0.00 4.79
1915 2182 7.867403 CCTATTGGTTACAATGCAACAATATCC 59.133 37.037 4.55 0.00 46.37 2.59
2035 2302 2.757868 AGCCTGATACACTGTCACTCTC 59.242 50.000 0.00 0.00 0.00 3.20
2036 2303 2.159170 GCCTGATACACTGTCACTCTCC 60.159 54.545 0.00 0.00 0.00 3.71
2037 2304 3.360867 CCTGATACACTGTCACTCTCCT 58.639 50.000 0.00 0.00 0.00 3.69
2038 2305 3.380004 CCTGATACACTGTCACTCTCCTC 59.620 52.174 0.00 0.00 0.00 3.71
2039 2306 4.269183 CTGATACACTGTCACTCTCCTCT 58.731 47.826 0.00 0.00 0.00 3.69
2040 2307 4.013050 TGATACACTGTCACTCTCCTCTG 58.987 47.826 0.00 0.00 0.00 3.35
2063 2330 5.187772 TGTTAGTGCCTTCAGATGATACACT 59.812 40.000 13.83 13.83 36.48 3.55
2136 2411 2.626743 CTGCCATCTTCATCCATTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
2265 2540 3.470567 GTCGAACGGAGTGCTGCG 61.471 66.667 11.37 11.37 45.00 5.18
2321 2596 5.185454 TCATGTTTCAGGTATGCTAGTTGG 58.815 41.667 0.00 0.00 0.00 3.77
2325 2600 3.610040 TCAGGTATGCTAGTTGGTGTG 57.390 47.619 0.00 0.00 0.00 3.82
2336 2611 0.240945 GTTGGTGTGCTATGGTGTGC 59.759 55.000 0.00 0.00 0.00 4.57
2355 2630 2.874086 TGCTGAGCCATTCAATACATCG 59.126 45.455 0.23 0.00 34.81 3.84
2404 2680 8.026341 GTTTTATAGCCTCAAAACGTTAGTCT 57.974 34.615 0.00 0.00 35.58 3.24
2405 2681 8.501580 GTTTTATAGCCTCAAAACGTTAGTCTT 58.498 33.333 0.00 0.00 35.58 3.01
2406 2682 7.591006 TTATAGCCTCAAAACGTTAGTCTTG 57.409 36.000 0.00 2.28 0.00 3.02
2407 2683 4.067972 AGCCTCAAAACGTTAGTCTTGA 57.932 40.909 0.00 7.10 0.00 3.02
2408 2684 4.642429 AGCCTCAAAACGTTAGTCTTGAT 58.358 39.130 12.24 0.00 0.00 2.57
2411 2687 5.689819 CCTCAAAACGTTAGTCTTGATTGG 58.310 41.667 12.24 8.36 0.00 3.16
2413 2689 6.295039 TCAAAACGTTAGTCTTGATTGGTC 57.705 37.500 0.00 0.00 0.00 4.02
2414 2690 5.237779 TCAAAACGTTAGTCTTGATTGGTCC 59.762 40.000 0.00 0.00 0.00 4.46
2415 2691 4.618920 AACGTTAGTCTTGATTGGTCCT 57.381 40.909 0.00 0.00 0.00 3.85
2416 2692 5.733620 AACGTTAGTCTTGATTGGTCCTA 57.266 39.130 0.00 0.00 0.00 2.94
2418 2694 4.113354 CGTTAGTCTTGATTGGTCCTAGC 58.887 47.826 0.00 0.00 0.00 3.42
2420 2696 2.551270 AGTCTTGATTGGTCCTAGCCA 58.449 47.619 0.00 0.00 36.62 4.75
2421 2697 3.118531 AGTCTTGATTGGTCCTAGCCAT 58.881 45.455 0.00 0.00 38.48 4.40
2422 2698 3.135530 AGTCTTGATTGGTCCTAGCCATC 59.864 47.826 0.00 0.00 38.48 3.51
2424 2700 3.782523 TCTTGATTGGTCCTAGCCATCTT 59.217 43.478 0.00 0.00 38.48 2.40
2425 2701 4.228210 TCTTGATTGGTCCTAGCCATCTTT 59.772 41.667 0.00 0.00 38.48 2.52
2427 2703 4.272489 TGATTGGTCCTAGCCATCTTTTG 58.728 43.478 0.00 0.00 38.48 2.44
2480 2821 6.873076 AGTTGTCTTGTTGCAATTCTCAAAAA 59.127 30.769 0.59 0.00 0.00 1.94
2538 2879 4.318332 CATACGATGCTATTCATGTGGGT 58.682 43.478 0.00 0.00 35.05 4.51
2607 2948 2.972505 GGGCGCATGGTCATACCG 60.973 66.667 10.83 0.00 42.58 4.02
2629 2970 1.107114 CGGCACATACTCTCAGGACT 58.893 55.000 0.00 0.00 0.00 3.85
2673 3014 4.530857 GGATCCACCAGCGTCCGG 62.531 72.222 6.95 0.00 38.79 5.14
2691 3032 1.080093 GAACGATGCCACTGTCCGA 60.080 57.895 0.00 0.00 0.00 4.55
2783 3124 9.448438 AAAATGTGTGTGTATATATGTGAGTGT 57.552 29.630 0.00 0.00 0.00 3.55
2814 3156 0.973632 TCTACCAATGTGGCGTCTGT 59.026 50.000 0.00 0.00 42.67 3.41
2820 3162 2.384382 CAATGTGGCGTCTGTTGTTTC 58.616 47.619 0.00 0.00 0.00 2.78
2897 3245 5.407084 TGAATACGTGTTGTGTGTGATAAGG 59.593 40.000 0.91 0.00 0.00 2.69
2903 3253 4.336993 GTGTTGTGTGTGATAAGGTTGGAA 59.663 41.667 0.00 0.00 0.00 3.53
2904 3254 4.950475 TGTTGTGTGTGATAAGGTTGGAAA 59.050 37.500 0.00 0.00 0.00 3.13
2929 3279 0.102300 AGCGTTTGTGTGGCCTTTTC 59.898 50.000 3.32 0.00 0.00 2.29
2998 3349 6.187125 TCAACTTTGAGATAAAGATGCAGC 57.813 37.500 0.00 0.00 32.30 5.25
2999 3350 5.706833 TCAACTTTGAGATAAAGATGCAGCA 59.293 36.000 4.07 0.00 32.30 4.41
3000 3351 6.376299 TCAACTTTGAGATAAAGATGCAGCAT 59.624 34.615 7.91 7.91 32.30 3.79
3001 3352 6.770746 ACTTTGAGATAAAGATGCAGCATT 57.229 33.333 9.90 0.00 0.00 3.56
3002 3353 7.870509 ACTTTGAGATAAAGATGCAGCATTA 57.129 32.000 9.90 2.78 0.00 1.90
3003 3354 8.461249 ACTTTGAGATAAAGATGCAGCATTAT 57.539 30.769 11.86 11.86 0.00 1.28
3004 3355 8.566260 ACTTTGAGATAAAGATGCAGCATTATC 58.434 33.333 24.90 24.90 35.81 1.75
3005 3356 7.444629 TTGAGATAAAGATGCAGCATTATCC 57.555 36.000 27.22 20.82 36.07 2.59
3006 3357 5.942236 TGAGATAAAGATGCAGCATTATCCC 59.058 40.000 27.22 20.32 36.07 3.85
3007 3358 5.259632 AGATAAAGATGCAGCATTATCCCC 58.740 41.667 27.22 11.16 36.07 4.81
3008 3359 3.607490 AAAGATGCAGCATTATCCCCT 57.393 42.857 9.90 0.00 0.00 4.79
3009 3360 2.875094 AGATGCAGCATTATCCCCTC 57.125 50.000 9.90 0.00 0.00 4.30
3010 3361 2.060275 AGATGCAGCATTATCCCCTCA 58.940 47.619 9.90 0.00 0.00 3.86
3011 3362 2.444388 AGATGCAGCATTATCCCCTCAA 59.556 45.455 9.90 0.00 0.00 3.02
3012 3363 2.057137 TGCAGCATTATCCCCTCAAC 57.943 50.000 0.00 0.00 0.00 3.18
3013 3364 1.565759 TGCAGCATTATCCCCTCAACT 59.434 47.619 0.00 0.00 0.00 3.16
3014 3365 2.025037 TGCAGCATTATCCCCTCAACTT 60.025 45.455 0.00 0.00 0.00 2.66
3015 3366 2.620585 GCAGCATTATCCCCTCAACTTC 59.379 50.000 0.00 0.00 0.00 3.01
3016 3367 3.889815 CAGCATTATCCCCTCAACTTCA 58.110 45.455 0.00 0.00 0.00 3.02
3017 3368 4.467769 CAGCATTATCCCCTCAACTTCAT 58.532 43.478 0.00 0.00 0.00 2.57
3018 3369 4.277672 CAGCATTATCCCCTCAACTTCATG 59.722 45.833 0.00 0.00 0.00 3.07
3019 3370 3.005155 GCATTATCCCCTCAACTTCATGC 59.995 47.826 0.00 0.00 0.00 4.06
3020 3371 3.297134 TTATCCCCTCAACTTCATGCC 57.703 47.619 0.00 0.00 0.00 4.40
3021 3372 0.259938 ATCCCCTCAACTTCATGCCC 59.740 55.000 0.00 0.00 0.00 5.36
3022 3373 0.846427 TCCCCTCAACTTCATGCCCT 60.846 55.000 0.00 0.00 0.00 5.19
3023 3374 0.394899 CCCCTCAACTTCATGCCCTC 60.395 60.000 0.00 0.00 0.00 4.30
3024 3375 0.622665 CCCTCAACTTCATGCCCTCT 59.377 55.000 0.00 0.00 0.00 3.69
3025 3376 1.407989 CCCTCAACTTCATGCCCTCTC 60.408 57.143 0.00 0.00 0.00 3.20
3026 3377 1.280133 CCTCAACTTCATGCCCTCTCA 59.720 52.381 0.00 0.00 0.00 3.27
3027 3378 2.092538 CCTCAACTTCATGCCCTCTCAT 60.093 50.000 0.00 0.00 0.00 2.90
3028 3379 3.204526 CTCAACTTCATGCCCTCTCATC 58.795 50.000 0.00 0.00 0.00 2.92
3029 3380 2.573009 TCAACTTCATGCCCTCTCATCA 59.427 45.455 0.00 0.00 0.00 3.07
3030 3381 3.201487 TCAACTTCATGCCCTCTCATCAT 59.799 43.478 0.00 0.00 0.00 2.45
3031 3382 3.488778 ACTTCATGCCCTCTCATCATC 57.511 47.619 0.00 0.00 0.00 2.92
3032 3383 3.047115 ACTTCATGCCCTCTCATCATCT 58.953 45.455 0.00 0.00 0.00 2.90
3033 3384 3.458857 ACTTCATGCCCTCTCATCATCTT 59.541 43.478 0.00 0.00 0.00 2.40
3034 3385 4.079901 ACTTCATGCCCTCTCATCATCTTT 60.080 41.667 0.00 0.00 0.00 2.52
3035 3386 5.131642 ACTTCATGCCCTCTCATCATCTTTA 59.868 40.000 0.00 0.00 0.00 1.85
3036 3387 5.837770 TCATGCCCTCTCATCATCTTTAT 57.162 39.130 0.00 0.00 0.00 1.40
3037 3388 5.802465 TCATGCCCTCTCATCATCTTTATC 58.198 41.667 0.00 0.00 0.00 1.75
3038 3389 5.546887 TCATGCCCTCTCATCATCTTTATCT 59.453 40.000 0.00 0.00 0.00 1.98
3039 3390 5.224821 TGCCCTCTCATCATCTTTATCTG 57.775 43.478 0.00 0.00 0.00 2.90
3040 3391 4.903649 TGCCCTCTCATCATCTTTATCTGA 59.096 41.667 0.00 0.00 0.00 3.27
3041 3392 5.221601 TGCCCTCTCATCATCTTTATCTGAC 60.222 44.000 0.00 0.00 0.00 3.51
3042 3393 5.792741 CCCTCTCATCATCTTTATCTGACC 58.207 45.833 0.00 0.00 0.00 4.02
3043 3394 5.306419 CCCTCTCATCATCTTTATCTGACCA 59.694 44.000 0.00 0.00 0.00 4.02
3044 3395 6.013553 CCCTCTCATCATCTTTATCTGACCAT 60.014 42.308 0.00 0.00 0.00 3.55
3045 3396 7.451732 CCTCTCATCATCTTTATCTGACCATT 58.548 38.462 0.00 0.00 0.00 3.16
3046 3397 7.388224 CCTCTCATCATCTTTATCTGACCATTG 59.612 40.741 0.00 0.00 0.00 2.82
3047 3398 7.799081 TCTCATCATCTTTATCTGACCATTGT 58.201 34.615 0.00 0.00 0.00 2.71
3048 3399 7.930325 TCTCATCATCTTTATCTGACCATTGTC 59.070 37.037 0.00 0.00 42.12 3.18
3049 3400 6.994496 TCATCATCTTTATCTGACCATTGTCC 59.006 38.462 0.00 0.00 41.01 4.02
3050 3401 6.312141 TCATCTTTATCTGACCATTGTCCA 57.688 37.500 0.00 0.00 41.01 4.02
3051 3402 6.351711 TCATCTTTATCTGACCATTGTCCAG 58.648 40.000 0.00 0.00 41.01 3.86
3060 3411 2.887152 GACCATTGTCCAGCATTATCCC 59.113 50.000 0.00 0.00 35.34 3.85
3163 3514 2.618709 AGTCCTTCCGCTTCAAAAACTG 59.381 45.455 0.00 0.00 0.00 3.16
3241 4560 2.102578 GCATGTTGAGCCCTACCAAAT 58.897 47.619 0.00 0.00 0.00 2.32
3249 4568 1.635487 AGCCCTACCAAATGCTCTTCA 59.365 47.619 0.00 0.00 0.00 3.02
3252 4571 2.420022 CCCTACCAAATGCTCTTCAACG 59.580 50.000 0.00 0.00 0.00 4.10
3308 4628 2.358898 GAGCAAGACACTCTTTGCCAAA 59.641 45.455 5.66 0.00 33.78 3.28
3309 4629 2.099756 AGCAAGACACTCTTTGCCAAAC 59.900 45.455 5.66 0.00 33.78 2.93
3343 4663 0.883833 CACATGGCCCTCAAAGTCAC 59.116 55.000 0.00 0.00 0.00 3.67
3440 5068 8.044908 AGGAAAAAGATTATTAGCTTCACCGTA 58.955 33.333 0.00 0.00 0.00 4.02
3444 5072 8.958119 AAAGATTATTAGCTTCACCGTATTGA 57.042 30.769 0.00 0.00 0.00 2.57
3446 5074 8.958119 AGATTATTAGCTTCACCGTATTGAAA 57.042 30.769 0.00 0.00 35.07 2.69
3474 5102 1.531578 GGAAGCGTCAAAACTCCAGAC 59.468 52.381 1.14 0.00 0.00 3.51
3475 5103 1.531578 GAAGCGTCAAAACTCCAGACC 59.468 52.381 0.00 0.00 0.00 3.85
3476 5104 0.468226 AGCGTCAAAACTCCAGACCA 59.532 50.000 0.00 0.00 0.00 4.02
3477 5105 0.868406 GCGTCAAAACTCCAGACCAG 59.132 55.000 0.00 0.00 0.00 4.00
3478 5106 1.540363 GCGTCAAAACTCCAGACCAGA 60.540 52.381 0.00 0.00 0.00 3.86
3527 5158 3.058016 CACTCGTTTCTTCCACCTACGTA 60.058 47.826 0.00 0.00 34.15 3.57
3579 5210 0.927537 CGTCTCAAGCACAACAACGA 59.072 50.000 0.00 0.00 0.00 3.85
3602 5233 3.295273 TCACCGAGCACGAGCACT 61.295 61.111 7.77 0.00 45.49 4.40
3621 5252 4.037446 GCACTAGAAAAACATTGTCCACCA 59.963 41.667 0.00 0.00 0.00 4.17
3622 5253 5.278957 GCACTAGAAAAACATTGTCCACCAT 60.279 40.000 0.00 0.00 0.00 3.55
3663 5295 5.712152 AAAAAGGTCCTTCACATGACATC 57.288 39.130 4.10 0.00 33.09 3.06
3675 5307 5.177326 TCACATGACATCGACATCAATTGA 58.823 37.500 11.26 11.26 0.00 2.57
3678 5310 4.470334 TGACATCGACATCAATTGAGGA 57.530 40.909 25.68 13.97 0.00 3.71
3686 5318 5.234972 TCGACATCAATTGAGGAATCATTCG 59.765 40.000 25.68 20.84 0.00 3.34
3690 5322 4.009002 TCAATTGAGGAATCATTCGCACA 58.991 39.130 3.38 0.00 0.00 4.57
3695 5327 0.734889 GGAATCATTCGCACACCCAG 59.265 55.000 0.00 0.00 0.00 4.45
3724 5356 1.891933 TCATGTATTGGGAGAGGCCA 58.108 50.000 5.01 0.00 38.95 5.36
3733 5365 1.274703 GGGAGAGGCCATCACCAAGA 61.275 60.000 5.01 0.00 40.25 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 0.590195 GTTCACAGCTCACTTGCAGG 59.410 55.000 0.00 0.00 34.99 4.85
58 59 3.493129 CGACAAACATCCGAAGAAGTTCA 59.507 43.478 5.50 0.00 32.94 3.18
111 112 7.824672 ACCGTACTATTATTAGCATCAGGTAC 58.175 38.462 0.00 0.00 0.00 3.34
112 113 9.519191 TTACCGTACTATTATTAGCATCAGGTA 57.481 33.333 0.00 0.00 0.00 3.08
128 129 7.776969 AGAACTGGAATCTATGTTACCGTACTA 59.223 37.037 0.00 0.00 0.00 1.82
130 131 6.696148 CAGAACTGGAATCTATGTTACCGTAC 59.304 42.308 0.00 0.00 0.00 3.67
131 132 6.682113 GCAGAACTGGAATCTATGTTACCGTA 60.682 42.308 3.99 0.00 0.00 4.02
132 133 5.661458 CAGAACTGGAATCTATGTTACCGT 58.339 41.667 0.00 0.00 0.00 4.83
133 134 4.508124 GCAGAACTGGAATCTATGTTACCG 59.492 45.833 3.99 0.00 0.00 4.02
134 135 5.428253 TGCAGAACTGGAATCTATGTTACC 58.572 41.667 3.99 0.00 0.00 2.85
135 136 5.007136 GCTGCAGAACTGGAATCTATGTTAC 59.993 44.000 20.43 0.00 0.00 2.50
136 137 5.104776 AGCTGCAGAACTGGAATCTATGTTA 60.105 40.000 20.43 0.00 0.00 2.41
138 139 3.199508 AGCTGCAGAACTGGAATCTATGT 59.800 43.478 20.43 0.00 0.00 2.29
139 140 3.806380 AGCTGCAGAACTGGAATCTATG 58.194 45.455 20.43 0.00 0.00 2.23
140 141 3.453717 TGAGCTGCAGAACTGGAATCTAT 59.546 43.478 20.43 0.00 0.00 1.98
142 143 1.627329 TGAGCTGCAGAACTGGAATCT 59.373 47.619 20.43 0.33 0.00 2.40
144 145 2.224719 ACTTGAGCTGCAGAACTGGAAT 60.225 45.455 20.43 0.00 0.00 3.01
150 151 2.160822 TCAGACTTGAGCTGCAGAAC 57.839 50.000 20.43 10.79 33.45 3.01
153 154 3.336468 AGAATTCAGACTTGAGCTGCAG 58.664 45.455 10.11 10.11 34.15 4.41
159 160 6.204301 TCTGCAAGAAAGAATTCAGACTTGAG 59.796 38.462 26.80 21.88 42.31 3.02
161 162 6.309712 TCTGCAAGAAAGAATTCAGACTTG 57.690 37.500 22.31 22.31 42.31 3.16
163 164 5.002516 CCTCTGCAAGAAAGAATTCAGACT 58.997 41.667 8.44 0.55 46.34 3.24
164 165 4.379290 GCCTCTGCAAGAAAGAATTCAGAC 60.379 45.833 8.44 0.00 46.34 3.51
175 176 0.035881 CTGGACAGCCTCTGCAAGAA 59.964 55.000 0.00 0.00 46.34 2.52
400 409 1.199558 GGGCGGCGTGTTATTTAACAA 59.800 47.619 9.37 0.00 46.54 2.83
401 410 0.803740 GGGCGGCGTGTTATTTAACA 59.196 50.000 9.37 0.00 43.32 2.41
410 419 4.015406 TGAATCAGGGCGGCGTGT 62.015 61.111 27.65 12.58 0.00 4.49
411 420 3.499737 GTGAATCAGGGCGGCGTG 61.500 66.667 24.03 24.03 0.00 5.34
449 461 2.417586 GGGGAAGTACGAAATTGGAACG 59.582 50.000 0.00 0.00 0.00 3.95
465 491 3.073356 ACAAGTATTTTCAGACGGGGGAA 59.927 43.478 0.00 0.00 0.00 3.97
466 492 2.640826 ACAAGTATTTTCAGACGGGGGA 59.359 45.455 0.00 0.00 0.00 4.81
467 493 3.007635 GACAAGTATTTTCAGACGGGGG 58.992 50.000 0.00 0.00 0.00 5.40
468 494 2.671396 CGACAAGTATTTTCAGACGGGG 59.329 50.000 0.00 0.00 0.00 5.73
469 495 2.671396 CCGACAAGTATTTTCAGACGGG 59.329 50.000 0.00 0.00 35.24 5.28
470 496 3.367025 GTCCGACAAGTATTTTCAGACGG 59.633 47.826 0.00 0.00 39.30 4.79
471 497 3.985279 TGTCCGACAAGTATTTTCAGACG 59.015 43.478 0.00 0.00 0.00 4.18
472 498 5.917541 TTGTCCGACAAGTATTTTCAGAC 57.082 39.130 9.99 0.00 32.34 3.51
473 499 6.567701 GCATTTGTCCGACAAGTATTTTCAGA 60.568 38.462 13.51 0.00 39.53 3.27
474 500 5.569059 GCATTTGTCCGACAAGTATTTTCAG 59.431 40.000 13.51 0.00 39.53 3.02
475 501 5.009110 TGCATTTGTCCGACAAGTATTTTCA 59.991 36.000 13.51 4.75 39.53 2.69
476 502 5.342259 GTGCATTTGTCCGACAAGTATTTTC 59.658 40.000 13.51 2.58 39.53 2.29
477 503 5.219633 GTGCATTTGTCCGACAAGTATTTT 58.780 37.500 13.51 0.00 39.53 1.82
478 504 4.277174 TGTGCATTTGTCCGACAAGTATTT 59.723 37.500 13.51 0.00 39.53 1.40
479 505 3.818210 TGTGCATTTGTCCGACAAGTATT 59.182 39.130 13.51 0.00 39.53 1.89
480 506 3.407698 TGTGCATTTGTCCGACAAGTAT 58.592 40.909 13.51 3.62 39.53 2.12
481 507 2.839975 TGTGCATTTGTCCGACAAGTA 58.160 42.857 13.51 1.28 39.53 2.24
482 508 1.674359 TGTGCATTTGTCCGACAAGT 58.326 45.000 13.51 8.64 39.53 3.16
483 509 2.772568 TTGTGCATTTGTCCGACAAG 57.227 45.000 13.51 5.27 39.53 3.16
484 510 3.510388 TTTTGTGCATTTGTCCGACAA 57.490 38.095 9.99 9.99 36.11 3.18
485 511 3.510388 TTTTTGTGCATTTGTCCGACA 57.490 38.095 0.00 0.00 0.00 4.35
486 512 6.517914 TTTATTTTTGTGCATTTGTCCGAC 57.482 33.333 0.00 0.00 0.00 4.79
487 513 8.994429 ATATTTATTTTTGTGCATTTGTCCGA 57.006 26.923 0.00 0.00 0.00 4.55
525 551 9.490379 GGAAAAATGGATGTATCTAGACGTATT 57.510 33.333 0.00 0.00 0.00 1.89
526 552 8.871125 AGGAAAAATGGATGTATCTAGACGTAT 58.129 33.333 0.00 0.00 0.00 3.06
527 553 8.246430 AGGAAAAATGGATGTATCTAGACGTA 57.754 34.615 0.00 0.00 0.00 3.57
528 554 7.125792 AGGAAAAATGGATGTATCTAGACGT 57.874 36.000 0.00 0.00 0.00 4.34
529 555 8.141909 TGTAGGAAAAATGGATGTATCTAGACG 58.858 37.037 0.00 0.00 0.00 4.18
530 556 9.832445 TTGTAGGAAAAATGGATGTATCTAGAC 57.168 33.333 0.00 0.00 0.00 2.59
532 558 9.838339 ACTTGTAGGAAAAATGGATGTATCTAG 57.162 33.333 0.00 0.00 0.00 2.43
539 565 9.289303 CGAAAATACTTGTAGGAAAAATGGATG 57.711 33.333 0.00 0.00 0.00 3.51
540 566 8.466798 CCGAAAATACTTGTAGGAAAAATGGAT 58.533 33.333 0.00 0.00 0.00 3.41
541 567 7.666388 TCCGAAAATACTTGTAGGAAAAATGGA 59.334 33.333 0.00 0.00 0.00 3.41
542 568 7.753580 GTCCGAAAATACTTGTAGGAAAAATGG 59.246 37.037 0.00 0.00 0.00 3.16
543 569 7.480542 CGTCCGAAAATACTTGTAGGAAAAATG 59.519 37.037 0.00 0.00 0.00 2.32
544 570 7.361457 CCGTCCGAAAATACTTGTAGGAAAAAT 60.361 37.037 0.00 0.00 0.00 1.82
545 571 6.073112 CCGTCCGAAAATACTTGTAGGAAAAA 60.073 38.462 0.00 0.00 0.00 1.94
546 572 5.409214 CCGTCCGAAAATACTTGTAGGAAAA 59.591 40.000 0.00 0.00 0.00 2.29
547 573 4.931002 CCGTCCGAAAATACTTGTAGGAAA 59.069 41.667 0.00 0.00 0.00 3.13
548 574 4.220382 TCCGTCCGAAAATACTTGTAGGAA 59.780 41.667 0.00 0.00 0.00 3.36
549 575 3.763360 TCCGTCCGAAAATACTTGTAGGA 59.237 43.478 0.00 0.00 0.00 2.94
550 576 4.110482 CTCCGTCCGAAAATACTTGTAGG 58.890 47.826 0.00 0.00 0.00 3.18
551 577 4.110482 CCTCCGTCCGAAAATACTTGTAG 58.890 47.826 0.00 0.00 0.00 2.74
552 578 3.119029 CCCTCCGTCCGAAAATACTTGTA 60.119 47.826 0.00 0.00 0.00 2.41
553 579 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
554 580 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
555 581 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
556 582 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
557 583 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
558 584 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
559 585 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
560 586 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
561 587 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
562 588 0.251297 TTGTACTCCCTCCGTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
563 589 0.033796 ATTGTACTCCCTCCGTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
564 590 0.822164 AATTGTACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
565 591 3.268330 GAAAATTGTACTCCCTCCGTCC 58.732 50.000 0.00 0.00 0.00 4.79
566 592 3.268330 GGAAAATTGTACTCCCTCCGTC 58.732 50.000 0.00 0.00 0.00 4.79
567 593 2.026542 GGGAAAATTGTACTCCCTCCGT 60.027 50.000 9.40 0.00 44.81 4.69
568 594 2.640184 GGGAAAATTGTACTCCCTCCG 58.360 52.381 9.40 0.00 44.81 4.63
573 599 6.605471 AAAATCCAGGGAAAATTGTACTCC 57.395 37.500 0.00 0.00 0.00 3.85
574 600 8.244113 CAGTAAAATCCAGGGAAAATTGTACTC 58.756 37.037 0.00 0.00 0.00 2.59
575 601 7.728532 ACAGTAAAATCCAGGGAAAATTGTACT 59.271 33.333 0.00 0.00 0.00 2.73
576 602 7.892609 ACAGTAAAATCCAGGGAAAATTGTAC 58.107 34.615 0.00 0.00 0.00 2.90
577 603 7.177744 GGACAGTAAAATCCAGGGAAAATTGTA 59.822 37.037 0.00 0.00 34.87 2.41
578 604 6.014584 GGACAGTAAAATCCAGGGAAAATTGT 60.015 38.462 0.00 0.00 34.87 2.71
579 605 6.211384 AGGACAGTAAAATCCAGGGAAAATTG 59.789 38.462 0.00 0.00 37.47 2.32
580 606 6.322931 AGGACAGTAAAATCCAGGGAAAATT 58.677 36.000 0.00 0.00 37.47 1.82
581 607 5.903923 AGGACAGTAAAATCCAGGGAAAAT 58.096 37.500 0.00 0.00 37.47 1.82
585 611 3.655777 ACAAGGACAGTAAAATCCAGGGA 59.344 43.478 0.00 0.00 37.47 4.20
588 614 9.626045 GATTTTTACAAGGACAGTAAAATCCAG 57.374 33.333 10.81 0.00 45.47 3.86
608 634 2.046285 CCCAGCGCGGAGGATTTTT 61.046 57.895 17.96 0.00 36.56 1.94
666 699 2.368875 TCCAGAGACCACCACTCTTTTC 59.631 50.000 0.00 0.00 41.94 2.29
784 817 3.414700 CGAGGCGAACAGGTGTGC 61.415 66.667 0.00 0.00 0.00 4.57
1038 1077 2.770232 GGATAGAAAAGAGGGGGAACGA 59.230 50.000 0.00 0.00 0.00 3.85
1039 1078 2.772515 AGGATAGAAAAGAGGGGGAACG 59.227 50.000 0.00 0.00 0.00 3.95
1049 1088 4.113354 GACCGCAGTACAGGATAGAAAAG 58.887 47.826 8.71 0.00 0.00 2.27
1054 1093 1.022735 ACGACCGCAGTACAGGATAG 58.977 55.000 8.71 3.12 0.00 2.08
1056 1095 0.737219 GTACGACCGCAGTACAGGAT 59.263 55.000 8.71 0.00 42.77 3.24
1058 1097 1.878070 TGTACGACCGCAGTACAGG 59.122 57.895 10.51 0.00 46.38 4.00
1068 1107 2.475519 CGCCAAACATTCATGTACGACC 60.476 50.000 0.00 0.00 40.80 4.79
1069 1108 2.413796 TCGCCAAACATTCATGTACGAC 59.586 45.455 0.00 0.00 40.80 4.34
1080 1119 1.151777 CCGTAGCGATCGCCAAACAT 61.152 55.000 34.89 18.77 43.17 2.71
1087 1126 0.654472 CAATTTGCCGTAGCGATCGC 60.654 55.000 32.15 32.15 44.31 4.58
1092 1131 1.013596 TCATCCAATTTGCCGTAGCG 58.986 50.000 0.00 0.00 44.31 4.26
1096 1135 9.691362 GTTAATTATAATCATCCAATTTGCCGT 57.309 29.630 0.00 0.00 0.00 5.68
1114 1153 5.099042 ACTCGAGGGTGCAAGTTAATTAT 57.901 39.130 18.41 0.00 0.00 1.28
1115 1154 4.546829 ACTCGAGGGTGCAAGTTAATTA 57.453 40.909 18.41 0.00 0.00 1.40
1143 1182 3.261643 TGCAACTAAGCTCTCCTGAATCA 59.738 43.478 0.00 0.00 34.99 2.57
1171 1212 0.912486 CCCAAATCTCCCTCGAACCT 59.088 55.000 0.00 0.00 0.00 3.50
1173 1214 2.357075 GTTCCCAAATCTCCCTCGAAC 58.643 52.381 0.00 0.00 0.00 3.95
1174 1215 1.280998 GGTTCCCAAATCTCCCTCGAA 59.719 52.381 0.00 0.00 0.00 3.71
1180 1221 1.064389 CCTCCTGGTTCCCAAATCTCC 60.064 57.143 0.00 0.00 30.80 3.71
1190 1231 1.908483 CAGGTAGCCCTCCTGGTTC 59.092 63.158 10.43 0.00 46.03 3.62
1195 1236 1.152440 CCGATCAGGTAGCCCTCCT 60.152 63.158 0.00 0.00 39.89 3.69
1224 1278 2.427453 TCTCCTTTAGCGCTCTACAAGG 59.573 50.000 16.34 20.71 36.05 3.61
1258 1312 2.436292 GTGCTCTGCAGCCCTGAG 60.436 66.667 9.47 1.69 46.26 3.35
1260 1314 2.746671 CAGTGCTCTGCAGCCCTG 60.747 66.667 9.47 2.00 46.26 4.45
1268 1322 2.357009 GCAACCATATTCCAGTGCTCTG 59.643 50.000 8.84 8.84 41.01 3.35
1276 1330 1.140852 CCGGAGAGCAACCATATTCCA 59.859 52.381 0.00 0.00 0.00 3.53
1287 1341 0.253044 CCTGAATTTCCCGGAGAGCA 59.747 55.000 0.73 0.00 0.00 4.26
1289 1343 1.139853 CTCCCTGAATTTCCCGGAGAG 59.860 57.143 17.86 11.51 42.33 3.20
1290 1344 1.204146 CTCCCTGAATTTCCCGGAGA 58.796 55.000 17.86 0.00 42.33 3.71
1291 1345 1.204146 TCTCCCTGAATTTCCCGGAG 58.796 55.000 17.10 17.10 41.30 4.63
1292 1346 1.893315 ATCTCCCTGAATTTCCCGGA 58.107 50.000 0.73 3.27 0.00 5.14
1293 1347 4.373156 AATATCTCCCTGAATTTCCCGG 57.627 45.455 0.00 0.00 0.00 5.73
1294 1348 7.168219 TCATAAATATCTCCCTGAATTTCCCG 58.832 38.462 0.00 0.00 0.00 5.14
1295 1349 8.797438 GTTCATAAATATCTCCCTGAATTTCCC 58.203 37.037 0.00 0.00 0.00 3.97
1296 1350 9.579932 AGTTCATAAATATCTCCCTGAATTTCC 57.420 33.333 0.00 0.00 0.00 3.13
1298 1352 9.277783 CGAGTTCATAAATATCTCCCTGAATTT 57.722 33.333 0.00 0.00 0.00 1.82
1299 1353 7.880195 CCGAGTTCATAAATATCTCCCTGAATT 59.120 37.037 0.00 0.00 0.00 2.17
1300 1354 7.390027 CCGAGTTCATAAATATCTCCCTGAAT 58.610 38.462 0.00 0.00 0.00 2.57
1301 1355 6.741521 GCCGAGTTCATAAATATCTCCCTGAA 60.742 42.308 0.00 0.00 0.00 3.02
1302 1356 5.279506 GCCGAGTTCATAAATATCTCCCTGA 60.280 44.000 0.00 0.00 0.00 3.86
1303 1357 4.932200 GCCGAGTTCATAAATATCTCCCTG 59.068 45.833 0.00 0.00 0.00 4.45
1304 1358 4.841246 AGCCGAGTTCATAAATATCTCCCT 59.159 41.667 0.00 0.00 0.00 4.20
1305 1359 5.153950 AGCCGAGTTCATAAATATCTCCC 57.846 43.478 0.00 0.00 0.00 4.30
1306 1360 5.046950 AGGAGCCGAGTTCATAAATATCTCC 60.047 44.000 0.00 0.00 37.29 3.71
1307 1361 6.031751 AGGAGCCGAGTTCATAAATATCTC 57.968 41.667 0.00 0.00 0.00 2.75
1308 1362 6.350612 GCTAGGAGCCGAGTTCATAAATATCT 60.351 42.308 0.00 0.00 34.48 1.98
1309 1363 5.808030 GCTAGGAGCCGAGTTCATAAATATC 59.192 44.000 0.00 0.00 34.48 1.63
1310 1364 5.246203 TGCTAGGAGCCGAGTTCATAAATAT 59.754 40.000 0.00 0.00 41.51 1.28
1311 1365 4.587262 TGCTAGGAGCCGAGTTCATAAATA 59.413 41.667 0.00 0.00 41.51 1.40
1312 1366 3.388024 TGCTAGGAGCCGAGTTCATAAAT 59.612 43.478 0.00 0.00 41.51 1.40
1313 1367 2.764010 TGCTAGGAGCCGAGTTCATAAA 59.236 45.455 0.00 0.00 41.51 1.40
1314 1368 2.362397 CTGCTAGGAGCCGAGTTCATAA 59.638 50.000 0.00 0.00 41.51 1.90
1315 1369 1.957177 CTGCTAGGAGCCGAGTTCATA 59.043 52.381 0.00 0.00 41.51 2.15
1316 1370 0.749649 CTGCTAGGAGCCGAGTTCAT 59.250 55.000 0.00 0.00 41.51 2.57
1323 1377 2.359169 TTGGACCTGCTAGGAGCCG 61.359 63.158 5.59 0.00 41.51 5.52
1328 1382 1.405821 CTCGTAGTTGGACCTGCTAGG 59.594 57.143 0.00 1.60 42.49 3.02
1341 1395 1.066858 CACCATGGCTTCACTCGTAGT 60.067 52.381 13.04 0.00 0.00 2.73
1345 1399 2.401766 GGCACCATGGCTTCACTCG 61.402 63.158 13.04 0.00 40.14 4.18
1361 1415 2.200373 ACAGTGGTGAATACTTGGGC 57.800 50.000 0.00 0.00 0.00 5.36
1376 1430 3.341823 CTTGCAGAAGATAGCCAACAGT 58.658 45.455 0.00 0.00 0.00 3.55
1377 1431 2.097142 GCTTGCAGAAGATAGCCAACAG 59.903 50.000 0.00 0.00 0.00 3.16
1382 1458 0.654683 CACGCTTGCAGAAGATAGCC 59.345 55.000 0.39 0.00 0.00 3.93
1412 1489 8.643324 GGTCCAGATCTAACATATCTTTACACT 58.357 37.037 0.00 0.00 31.22 3.55
1417 1494 9.440761 ACTTAGGTCCAGATCTAACATATCTTT 57.559 33.333 0.00 0.00 31.29 2.52
1424 1501 6.040955 CAGCATACTTAGGTCCAGATCTAACA 59.959 42.308 0.00 0.00 31.29 2.41
1429 1506 5.537300 TTCAGCATACTTAGGTCCAGATC 57.463 43.478 0.00 0.00 0.00 2.75
1435 1512 5.888105 TCGTAGTTTCAGCATACTTAGGTC 58.112 41.667 0.00 0.00 0.00 3.85
1466 1543 1.153329 ACGCCGTGTGTCCAGAAAA 60.153 52.632 0.00 0.00 0.00 2.29
1469 1546 3.220658 TGACGCCGTGTGTCCAGA 61.221 61.111 0.00 0.00 41.72 3.86
1471 1548 2.581208 AAAGTGACGCCGTGTGTCCA 62.581 55.000 0.00 0.00 41.72 4.02
1473 1550 1.126113 CATAAAGTGACGCCGTGTGTC 59.874 52.381 0.00 9.73 42.60 3.67
1475 1552 1.144969 ACATAAAGTGACGCCGTGTG 58.855 50.000 0.00 0.00 0.00 3.82
1476 1553 2.029649 AGTACATAAAGTGACGCCGTGT 60.030 45.455 0.00 0.00 0.00 4.49
1477 1554 2.602878 AGTACATAAAGTGACGCCGTG 58.397 47.619 0.00 0.00 0.00 4.94
1479 1556 3.181774 GCATAGTACATAAAGTGACGCCG 59.818 47.826 0.00 0.00 0.00 6.46
1481 1558 4.209288 CCTGCATAGTACATAAAGTGACGC 59.791 45.833 0.00 0.00 0.00 5.19
1482 1559 4.209288 GCCTGCATAGTACATAAAGTGACG 59.791 45.833 0.00 0.00 0.00 4.35
1483 1560 5.116180 TGCCTGCATAGTACATAAAGTGAC 58.884 41.667 0.00 0.00 0.00 3.67
1485 1562 5.353956 TGTTGCCTGCATAGTACATAAAGTG 59.646 40.000 0.00 0.00 0.00 3.16
1486 1563 5.354234 GTGTTGCCTGCATAGTACATAAAGT 59.646 40.000 0.00 0.00 0.00 2.66
1487 1564 5.353956 TGTGTTGCCTGCATAGTACATAAAG 59.646 40.000 0.00 0.00 0.00 1.85
1494 1656 4.220693 AGATTGTGTTGCCTGCATAGTA 57.779 40.909 0.00 0.00 0.00 1.82
1496 1658 3.940852 TGTAGATTGTGTTGCCTGCATAG 59.059 43.478 0.00 0.00 0.00 2.23
1500 1662 2.154462 ACTGTAGATTGTGTTGCCTGC 58.846 47.619 0.00 0.00 0.00 4.85
1501 1663 5.643348 TGATAACTGTAGATTGTGTTGCCTG 59.357 40.000 0.00 0.00 0.00 4.85
1503 1665 6.683974 ATGATAACTGTAGATTGTGTTGCC 57.316 37.500 0.00 0.00 0.00 4.52
1543 1705 7.575532 GCCTCATCAAAACATTCACAGTATTCA 60.576 37.037 0.00 0.00 0.00 2.57
1545 1707 6.209192 TGCCTCATCAAAACATTCACAGTATT 59.791 34.615 0.00 0.00 0.00 1.89
1547 1709 5.048782 GTGCCTCATCAAAACATTCACAGTA 60.049 40.000 0.00 0.00 0.00 2.74
1562 1724 2.228822 ACAAACGGAAATGTGCCTCATC 59.771 45.455 0.00 0.00 35.48 2.92
1563 1725 2.030007 CACAAACGGAAATGTGCCTCAT 60.030 45.455 0.00 0.00 40.32 2.90
1587 1749 9.750125 CAGTACTTGACATGACTATATGCTAAA 57.250 33.333 0.00 0.00 0.00 1.85
1588 1750 8.914011 ACAGTACTTGACATGACTATATGCTAA 58.086 33.333 0.00 0.00 0.00 3.09
1589 1751 8.465273 ACAGTACTTGACATGACTATATGCTA 57.535 34.615 0.00 0.00 0.00 3.49
1590 1752 7.353414 ACAGTACTTGACATGACTATATGCT 57.647 36.000 0.00 0.00 0.00 3.79
1592 1754 8.851145 AGGTACAGTACTTGACATGACTATATG 58.149 37.037 10.62 0.00 0.00 1.78
1593 1755 8.998277 AGGTACAGTACTTGACATGACTATAT 57.002 34.615 10.62 0.00 0.00 0.86
1595 1757 7.719871 AAGGTACAGTACTTGACATGACTAT 57.280 36.000 10.62 0.00 0.00 2.12
1596 1758 7.450634 AGAAAGGTACAGTACTTGACATGACTA 59.549 37.037 10.62 0.00 0.00 2.59
1598 1760 6.456501 AGAAAGGTACAGTACTTGACATGAC 58.543 40.000 10.62 0.00 0.00 3.06
1599 1761 6.665992 AGAAAGGTACAGTACTTGACATGA 57.334 37.500 10.62 0.00 0.00 3.07
1623 1785 3.638484 GCAAGCGCCTCTTTTCTAAAAA 58.362 40.909 2.29 0.00 31.27 1.94
1624 1786 3.282831 GCAAGCGCCTCTTTTCTAAAA 57.717 42.857 2.29 0.00 31.27 1.52
1625 1787 2.989422 GCAAGCGCCTCTTTTCTAAA 57.011 45.000 2.29 0.00 31.27 1.85
1638 1800 3.059386 TTTAAGGCCGGGCAAGCG 61.059 61.111 31.59 0.00 0.00 4.68
1639 1801 1.977009 AGTTTAAGGCCGGGCAAGC 60.977 57.895 31.59 18.12 0.00 4.01
1640 1802 0.608035 TCAGTTTAAGGCCGGGCAAG 60.608 55.000 31.59 11.02 0.00 4.01
1641 1803 0.608035 CTCAGTTTAAGGCCGGGCAA 60.608 55.000 31.59 14.22 0.00 4.52
1642 1804 1.002624 CTCAGTTTAAGGCCGGGCA 60.003 57.895 31.59 7.51 0.00 5.36
1643 1805 1.749258 CCTCAGTTTAAGGCCGGGC 60.749 63.158 22.67 22.67 0.00 6.13
1644 1806 4.637771 CCTCAGTTTAAGGCCGGG 57.362 61.111 2.18 0.00 0.00 5.73
1649 1811 1.913419 TGTAGGGGCCTCAGTTTAAGG 59.087 52.381 4.79 0.00 36.95 2.69
1650 1812 2.092914 CCTGTAGGGGCCTCAGTTTAAG 60.093 54.545 4.79 0.00 0.00 1.85
1651 1813 1.913419 CCTGTAGGGGCCTCAGTTTAA 59.087 52.381 4.79 0.00 0.00 1.52
1652 1814 1.580059 CCTGTAGGGGCCTCAGTTTA 58.420 55.000 4.79 0.00 0.00 2.01
1653 1815 1.853250 GCCTGTAGGGGCCTCAGTTT 61.853 60.000 4.79 0.00 45.92 2.66
1654 1816 2.301738 GCCTGTAGGGGCCTCAGTT 61.302 63.158 4.79 0.00 45.92 3.16
1655 1817 2.689034 GCCTGTAGGGGCCTCAGT 60.689 66.667 4.79 0.00 45.92 3.41
1662 1824 0.541863 CAGTACTTGGCCTGTAGGGG 59.458 60.000 3.32 0.00 35.18 4.79
1663 1825 1.276622 ACAGTACTTGGCCTGTAGGG 58.723 55.000 3.32 5.23 40.03 3.53
1664 1826 2.167900 GGTACAGTACTTGGCCTGTAGG 59.832 54.545 10.62 5.56 42.97 3.18
1665 1827 3.097614 AGGTACAGTACTTGGCCTGTAG 58.902 50.000 10.62 0.94 42.97 2.74
1666 1828 3.179902 AGGTACAGTACTTGGCCTGTA 57.820 47.619 10.62 4.56 41.85 2.74
1667 1829 2.025636 AGGTACAGTACTTGGCCTGT 57.974 50.000 10.62 5.68 43.90 4.00
1668 1830 3.704566 TCATAGGTACAGTACTTGGCCTG 59.295 47.826 10.62 0.00 37.05 4.85
1669 1831 3.705072 GTCATAGGTACAGTACTTGGCCT 59.295 47.826 10.62 12.00 38.95 5.19
1670 1832 3.449737 TGTCATAGGTACAGTACTTGGCC 59.550 47.826 10.62 0.00 0.00 5.36
1671 1833 4.401519 TCTGTCATAGGTACAGTACTTGGC 59.598 45.833 10.62 8.21 43.88 4.52
1672 1834 6.716934 ATCTGTCATAGGTACAGTACTTGG 57.283 41.667 10.62 0.99 43.88 3.61
1673 1835 8.221965 TGTATCTGTCATAGGTACAGTACTTG 57.778 38.462 10.62 6.60 45.70 3.16
1681 1843 7.040062 AGCTGAGATTGTATCTGTCATAGGTAC 60.040 40.741 0.00 0.00 42.31 3.34
1691 1853 5.220624 GCAACAGAAGCTGAGATTGTATCTG 60.221 44.000 0.82 5.02 40.38 2.90
1692 1854 4.874966 GCAACAGAAGCTGAGATTGTATCT 59.125 41.667 0.82 0.00 43.70 1.98
1698 1965 5.312079 AGTTAAGCAACAGAAGCTGAGATT 58.688 37.500 0.82 0.00 42.53 2.40
1707 1974 2.687425 TGCTGCAAGTTAAGCAACAGAA 59.313 40.909 0.00 0.00 46.06 3.02
1715 1982 5.176223 CAGTCCAAAATTGCTGCAAGTTAAG 59.824 40.000 25.62 20.23 30.35 1.85
1753 2020 2.354821 GTCAACCAGAGCGTTGTTCTTT 59.645 45.455 1.76 0.00 43.02 2.52
1774 2041 6.932356 ACAACACCATATTGCTTCAGATAG 57.068 37.500 0.00 0.00 0.00 2.08
1777 2044 4.154015 CGAACAACACCATATTGCTTCAGA 59.846 41.667 0.00 0.00 0.00 3.27
1783 2050 3.160545 CGTTCGAACAACACCATATTGC 58.839 45.455 26.71 0.00 0.00 3.56
1786 2053 2.997986 GTCCGTTCGAACAACACCATAT 59.002 45.455 26.71 0.00 0.00 1.78
1804 2071 3.191371 CCATAACTTCTGCCACTTTGTCC 59.809 47.826 0.00 0.00 0.00 4.02
1807 2074 5.010012 AGTTTCCATAACTTCTGCCACTTTG 59.990 40.000 0.00 0.00 0.00 2.77
1915 2182 1.650314 TTGCATGCATGTGAGGAGCG 61.650 55.000 26.79 0.00 0.00 5.03
2038 2305 5.521735 GTGTATCATCTGAAGGCACTAACAG 59.478 44.000 0.00 0.00 38.49 3.16
2039 2306 5.187772 AGTGTATCATCTGAAGGCACTAACA 59.812 40.000 10.72 0.00 38.49 2.41
2040 2307 5.665459 AGTGTATCATCTGAAGGCACTAAC 58.335 41.667 10.72 0.00 38.49 2.34
2108 2383 2.362397 GGATGAAGATGGCAGTAGTCGA 59.638 50.000 0.00 0.00 0.00 4.20
2109 2384 2.101415 TGGATGAAGATGGCAGTAGTCG 59.899 50.000 0.00 0.00 0.00 4.18
2110 2385 3.827008 TGGATGAAGATGGCAGTAGTC 57.173 47.619 0.00 0.00 0.00 2.59
2265 2540 1.661341 CATCCTTCAGTAGTGCTGCC 58.339 55.000 2.92 0.00 44.66 4.85
2321 2596 1.081892 CTCAGCACACCATAGCACAC 58.918 55.000 0.00 0.00 0.00 3.82
2325 2600 0.465097 ATGGCTCAGCACACCATAGC 60.465 55.000 0.00 0.00 42.39 2.97
2336 2611 4.992951 TCATCGATGTATTGAATGGCTCAG 59.007 41.667 24.09 0.00 34.81 3.35
2355 2630 6.586082 ACGACCAGTGCAAATTAAATTTCATC 59.414 34.615 0.00 0.00 0.00 2.92
2372 2648 4.546829 TTGAGGCTATAAAACGACCAGT 57.453 40.909 0.00 0.00 0.00 4.00
2404 2680 4.591321 AAAGATGGCTAGGACCAATCAA 57.409 40.909 0.00 0.00 44.65 2.57
2405 2681 4.018506 TCAAAAGATGGCTAGGACCAATCA 60.019 41.667 0.00 0.00 44.65 2.57
2406 2682 4.526970 TCAAAAGATGGCTAGGACCAATC 58.473 43.478 0.00 0.00 44.65 2.67
2407 2683 4.591321 TCAAAAGATGGCTAGGACCAAT 57.409 40.909 0.00 0.00 44.65 3.16
2408 2684 4.272489 CATCAAAAGATGGCTAGGACCAA 58.728 43.478 0.00 0.00 44.65 3.67
2420 2696 6.729690 TGTTTTGGACTTCCATCAAAAGAT 57.270 33.333 0.00 0.00 46.97 2.40
2421 2697 6.550854 AGATGTTTTGGACTTCCATCAAAAGA 59.449 34.615 0.00 0.00 46.97 2.52
2422 2698 6.643770 CAGATGTTTTGGACTTCCATCAAAAG 59.356 38.462 0.00 0.00 46.97 2.27
2424 2700 5.010922 CCAGATGTTTTGGACTTCCATCAAA 59.989 40.000 0.00 0.00 46.97 2.69
2425 2701 4.523943 CCAGATGTTTTGGACTTCCATCAA 59.476 41.667 0.00 0.00 46.97 2.57
2427 2703 4.335416 TCCAGATGTTTTGGACTTCCATC 58.665 43.478 0.00 0.00 46.97 3.51
2480 2821 0.610232 GCCAAGCCTTCCATCTGTGT 60.610 55.000 0.00 0.00 0.00 3.72
2595 2936 1.594293 GCCGACCGGTATGACCATG 60.594 63.158 7.34 0.00 38.47 3.66
2607 2948 0.103208 CCTGAGAGTATGTGCCGACC 59.897 60.000 0.00 0.00 0.00 4.79
2629 2970 1.941209 GCTCTTGTCGATCACCTGCAA 60.941 52.381 0.00 0.00 0.00 4.08
2673 3014 0.460284 ATCGGACAGTGGCATCGTTC 60.460 55.000 0.00 0.00 0.00 3.95
2683 3024 0.255318 AGAGGGACGTATCGGACAGT 59.745 55.000 0.00 0.00 0.00 3.55
2783 3124 6.239430 GCCACATTGGTAGAGAAGATCATAGA 60.239 42.308 0.00 0.00 40.46 1.98
2794 3135 1.066858 ACAGACGCCACATTGGTAGAG 60.067 52.381 0.00 0.00 40.46 2.43
2814 3156 5.799213 ACAAAACCAAACCATCTGAAACAA 58.201 33.333 0.00 0.00 0.00 2.83
2820 3162 5.540911 AGCATTACAAAACCAAACCATCTG 58.459 37.500 0.00 0.00 0.00 2.90
2897 3245 2.095919 ACAAACGCTAGCGATTTCCAAC 60.096 45.455 41.33 0.00 42.83 3.77
2903 3253 0.796312 CCACACAAACGCTAGCGATT 59.204 50.000 41.33 32.93 42.83 3.34
2904 3254 1.635663 GCCACACAAACGCTAGCGAT 61.636 55.000 41.33 29.11 42.83 4.58
2929 3279 1.580893 CGCGACAAATCATGCCGTG 60.581 57.895 0.00 0.00 38.99 4.94
2998 3349 3.571401 GGCATGAAGTTGAGGGGATAATG 59.429 47.826 0.00 0.00 0.00 1.90
2999 3350 3.437052 GGGCATGAAGTTGAGGGGATAAT 60.437 47.826 0.00 0.00 0.00 1.28
3000 3351 2.091885 GGGCATGAAGTTGAGGGGATAA 60.092 50.000 0.00 0.00 0.00 1.75
3001 3352 1.494721 GGGCATGAAGTTGAGGGGATA 59.505 52.381 0.00 0.00 0.00 2.59
3002 3353 0.259938 GGGCATGAAGTTGAGGGGAT 59.740 55.000 0.00 0.00 0.00 3.85
3003 3354 0.846427 AGGGCATGAAGTTGAGGGGA 60.846 55.000 0.00 0.00 0.00 4.81
3004 3355 0.394899 GAGGGCATGAAGTTGAGGGG 60.395 60.000 0.00 0.00 0.00 4.79
3005 3356 0.622665 AGAGGGCATGAAGTTGAGGG 59.377 55.000 0.00 0.00 0.00 4.30
3006 3357 1.280133 TGAGAGGGCATGAAGTTGAGG 59.720 52.381 0.00 0.00 0.00 3.86
3007 3358 2.775911 TGAGAGGGCATGAAGTTGAG 57.224 50.000 0.00 0.00 0.00 3.02
3008 3359 2.573009 TGATGAGAGGGCATGAAGTTGA 59.427 45.455 0.00 0.00 0.00 3.18
3009 3360 2.995283 TGATGAGAGGGCATGAAGTTG 58.005 47.619 0.00 0.00 0.00 3.16
3010 3361 3.458857 AGATGATGAGAGGGCATGAAGTT 59.541 43.478 0.00 0.00 0.00 2.66
3011 3362 3.047115 AGATGATGAGAGGGCATGAAGT 58.953 45.455 0.00 0.00 0.00 3.01
3012 3363 3.773418 AGATGATGAGAGGGCATGAAG 57.227 47.619 0.00 0.00 0.00 3.02
3013 3364 4.515028 AAAGATGATGAGAGGGCATGAA 57.485 40.909 0.00 0.00 0.00 2.57
3014 3365 5.546887 AGATAAAGATGATGAGAGGGCATGA 59.453 40.000 0.00 0.00 0.00 3.07
3015 3366 5.644206 CAGATAAAGATGATGAGAGGGCATG 59.356 44.000 0.00 0.00 0.00 4.06
3016 3367 5.546887 TCAGATAAAGATGATGAGAGGGCAT 59.453 40.000 0.00 0.00 0.00 4.40
3017 3368 4.903649 TCAGATAAAGATGATGAGAGGGCA 59.096 41.667 0.00 0.00 0.00 5.36
3018 3369 5.237048 GTCAGATAAAGATGATGAGAGGGC 58.763 45.833 0.00 0.00 0.00 5.19
3019 3370 5.306419 TGGTCAGATAAAGATGATGAGAGGG 59.694 44.000 0.00 0.00 0.00 4.30
3020 3371 6.416631 TGGTCAGATAAAGATGATGAGAGG 57.583 41.667 0.00 0.00 0.00 3.69
3021 3372 7.932491 ACAATGGTCAGATAAAGATGATGAGAG 59.068 37.037 0.00 0.00 0.00 3.20
3022 3373 7.799081 ACAATGGTCAGATAAAGATGATGAGA 58.201 34.615 0.00 0.00 0.00 3.27
3023 3374 7.172875 GGACAATGGTCAGATAAAGATGATGAG 59.827 40.741 1.86 0.00 46.17 2.90
3024 3375 6.994496 GGACAATGGTCAGATAAAGATGATGA 59.006 38.462 1.86 0.00 46.17 2.92
3025 3376 6.769341 TGGACAATGGTCAGATAAAGATGATG 59.231 38.462 1.86 0.00 46.17 3.07
3026 3377 6.903516 TGGACAATGGTCAGATAAAGATGAT 58.096 36.000 1.86 0.00 46.17 2.45
3027 3378 6.312141 TGGACAATGGTCAGATAAAGATGA 57.688 37.500 1.86 0.00 46.17 2.92
3028 3379 5.008415 GCTGGACAATGGTCAGATAAAGATG 59.992 44.000 1.86 0.00 46.17 2.90
3029 3380 5.128919 GCTGGACAATGGTCAGATAAAGAT 58.871 41.667 1.86 0.00 46.17 2.40
3030 3381 4.019411 TGCTGGACAATGGTCAGATAAAGA 60.019 41.667 1.86 0.00 46.17 2.52
3031 3382 4.264253 TGCTGGACAATGGTCAGATAAAG 58.736 43.478 1.86 0.00 46.17 1.85
3032 3383 4.299586 TGCTGGACAATGGTCAGATAAA 57.700 40.909 1.86 0.00 46.17 1.40
3033 3384 3.998913 TGCTGGACAATGGTCAGATAA 57.001 42.857 1.86 0.00 46.17 1.75
3034 3385 4.508551 AATGCTGGACAATGGTCAGATA 57.491 40.909 1.86 0.00 46.17 1.98
3035 3386 3.377253 AATGCTGGACAATGGTCAGAT 57.623 42.857 1.86 0.00 46.17 2.90
3036 3387 2.885135 AATGCTGGACAATGGTCAGA 57.115 45.000 1.86 0.00 46.17 3.27
3037 3388 3.567164 GGATAATGCTGGACAATGGTCAG 59.433 47.826 1.86 0.00 46.17 3.51
3038 3389 3.554934 GGATAATGCTGGACAATGGTCA 58.445 45.455 1.86 0.00 46.17 4.02
3039 3390 2.887152 GGGATAATGCTGGACAATGGTC 59.113 50.000 0.00 0.00 43.55 4.02
3040 3391 2.424812 GGGGATAATGCTGGACAATGGT 60.425 50.000 0.00 0.00 0.00 3.55
3041 3392 2.158415 AGGGGATAATGCTGGACAATGG 60.158 50.000 0.00 0.00 0.00 3.16
3042 3393 3.152341 GAGGGGATAATGCTGGACAATG 58.848 50.000 0.00 0.00 0.00 2.82
3043 3394 2.785269 TGAGGGGATAATGCTGGACAAT 59.215 45.455 0.00 0.00 0.00 2.71
3044 3395 2.204463 TGAGGGGATAATGCTGGACAA 58.796 47.619 0.00 0.00 0.00 3.18
3045 3396 1.891933 TGAGGGGATAATGCTGGACA 58.108 50.000 0.00 0.00 0.00 4.02
3046 3397 2.173569 AGTTGAGGGGATAATGCTGGAC 59.826 50.000 0.00 0.00 0.00 4.02
3047 3398 2.492025 AGTTGAGGGGATAATGCTGGA 58.508 47.619 0.00 0.00 0.00 3.86
3048 3399 3.217626 GAAGTTGAGGGGATAATGCTGG 58.782 50.000 0.00 0.00 0.00 4.85
3049 3400 3.889815 TGAAGTTGAGGGGATAATGCTG 58.110 45.455 0.00 0.00 0.00 4.41
3050 3401 4.467769 CATGAAGTTGAGGGGATAATGCT 58.532 43.478 0.00 0.00 0.00 3.79
3051 3402 3.005155 GCATGAAGTTGAGGGGATAATGC 59.995 47.826 0.00 0.00 0.00 3.56
3060 3411 1.280133 TGAGAGGGCATGAAGTTGAGG 59.720 52.381 0.00 0.00 0.00 3.86
3197 4244 2.092753 TGATTCCTCCCAAGCATCACTC 60.093 50.000 0.00 0.00 0.00 3.51
3249 4568 2.139118 GCTTGTCTTCTTGAGCTCGTT 58.861 47.619 9.64 0.00 32.54 3.85
3252 4571 2.175878 TGGCTTGTCTTCTTGAGCTC 57.824 50.000 6.82 6.82 35.53 4.09
3296 4616 1.318576 CCTTCGGTTTGGCAAAGAGT 58.681 50.000 13.94 0.00 0.00 3.24
3308 4628 1.052124 TGTGGAGTTGGACCTTCGGT 61.052 55.000 0.00 0.00 39.44 4.69
3309 4629 0.324943 ATGTGGAGTTGGACCTTCGG 59.675 55.000 0.00 0.00 0.00 4.30
3343 4663 1.808133 GCGCTAAATCAGGGTGGAGAG 60.808 57.143 0.00 0.00 39.38 3.20
3440 5068 4.825085 TGACGCTTCCTAACCTTTTTCAAT 59.175 37.500 0.00 0.00 0.00 2.57
3444 5072 5.126545 AGTTTTGACGCTTCCTAACCTTTTT 59.873 36.000 2.28 0.00 0.00 1.94
3446 5074 4.204799 AGTTTTGACGCTTCCTAACCTTT 58.795 39.130 2.28 0.00 0.00 3.11
3474 5102 6.467677 TCTTCTTTGAGGTTAGTGATTCTGG 58.532 40.000 0.00 0.00 0.00 3.86
3475 5103 7.279758 GGATCTTCTTTGAGGTTAGTGATTCTG 59.720 40.741 0.00 0.00 0.00 3.02
3476 5104 7.334858 GGATCTTCTTTGAGGTTAGTGATTCT 58.665 38.462 0.00 0.00 0.00 2.40
3477 5105 6.540551 GGGATCTTCTTTGAGGTTAGTGATTC 59.459 42.308 0.00 0.00 0.00 2.52
3478 5106 6.012508 TGGGATCTTCTTTGAGGTTAGTGATT 60.013 38.462 0.00 0.00 0.00 2.57
3562 5193 2.290367 CCAATCGTTGTTGTGCTTGAGA 59.710 45.455 0.00 0.00 0.00 3.27
3579 5210 2.047274 CGTGCTCGGTGACCCAAT 60.047 61.111 0.00 0.00 0.00 3.16
3602 5233 6.068010 AGTGATGGTGGACAATGTTTTTCTA 58.932 36.000 0.00 0.00 0.00 2.10
3621 5252 2.768253 TGCGATGTTCTGGAAGTGAT 57.232 45.000 0.00 0.00 33.76 3.06
3622 5253 2.542020 TTGCGATGTTCTGGAAGTGA 57.458 45.000 0.00 0.00 33.76 3.41
3656 5288 5.027293 TCCTCAATTGATGTCGATGTCAT 57.973 39.130 8.96 0.00 0.00 3.06
3663 5295 5.438117 CGAATGATTCCTCAATTGATGTCG 58.562 41.667 8.96 6.68 34.37 4.35
3675 5307 0.327924 TGGGTGTGCGAATGATTCCT 59.672 50.000 0.00 0.00 0.00 3.36
3678 5310 1.541147 CAACTGGGTGTGCGAATGATT 59.459 47.619 0.00 0.00 0.00 2.57
3686 5318 1.537202 GAAGATCACAACTGGGTGTGC 59.463 52.381 13.28 1.67 46.97 4.57
3690 5322 3.795688 ACATGAAGATCACAACTGGGT 57.204 42.857 0.00 0.00 0.00 4.51
3695 5327 6.115446 TCTCCCAATACATGAAGATCACAAC 58.885 40.000 0.00 0.00 0.00 3.32
3702 5334 2.439507 GGCCTCTCCCAATACATGAAGA 59.560 50.000 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.